Metagenome / Metatranscriptome Family F073309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073309
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	53 residues
Representative Sequence	VHAPARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFLGRWLEKRAR
Number of Associated Samples	87
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.17 %
% of genes near scaffold ends (potentially truncated)	14.17 %
% of genes from short scaffolds (< 2000 bps)	79.17 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.98% β-sheet: 0.00% Coil/Unstructured: 39.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.9.1: alpha-catenin/vinculin	d3rf3a1	3rf3	0.83629
f.63.1.1: Claudin	d3jbre_	3jbr	0.82606
a.25.1.0: automated matches	d5uwza_	5uwz	0.81472
a.118.8.0: automated matches	d5mjza_	5mjz	0.81242
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.81235

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00160	Pro_isomerase	43.33
PF00389	2-Hacid_dh	25.00
PF13646	HEAT_2	10.00
PF02826	2-Hacid_dh_C	7.50
PF05258	DciA	7.50
PF12850	Metallophos_2	0.83
PF00364	Biotin_lipoyl	0.83
PF13231	PMT_2	0.83
PF00884	Sulfatase	0.83
PF08281	Sigma70_r4_2	0.83
PF01702	TGT	0.83
PF00208	ELFV_dehydrog	0.83
PF02581	TMP-TENI	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	43.33
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	7.50
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.83
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.83
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	0.83
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.67 %
Unclassified	root	N/A	12.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.83 %
Unclassified	root	N/A	12.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.67 %
Unclassified	root	N/A	12.50 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Unclassified	root	N/A	12.50 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.83 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Unclassified	root	N/A	12.50 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	0.83 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Unclassified	root	N/A	12.50 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	0.83 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.83 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Unclassified	root	N/A	12.50 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	0.83 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.83 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.67 %
Unclassified	root	N/A	12.50 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.83 %
Candidatus Jettenia caeni	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia caeni	0.83 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_34934_len_2132_cov_13_973734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2182	Open in IMG/M
3300001145\|JGI12682J13319_1000932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3316	Open in IMG/M
3300004020\|Ga0055440_10088033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005332\|Ga0066388_100076919	All Organisms → cellular organisms → Bacteria	3682	Open in IMG/M
3300005332\|Ga0066388_101526309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300005332\|Ga0066388_102866946	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005444\|Ga0070694_100199649	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300005445\|Ga0070708_100001588	All Organisms → cellular organisms → Bacteria → Acidobacteria	17413	Open in IMG/M
3300005445\|Ga0070708_100012564	All Organisms → cellular organisms → Bacteria → Acidobacteria	6912	Open in IMG/M
3300005445\|Ga0070708_100144534	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300005445\|Ga0070708_100145768	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300005445\|Ga0070708_100561773	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005445\|Ga0070708_100615396	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005445\|Ga0070708_101920142	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005467\|Ga0070706_102180440	Not Available	500	Open in IMG/M
3300005468\|Ga0070707_100376592	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300005468\|Ga0070707_101785736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005471\|Ga0070698_100230388	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300005471\|Ga0070698_102223951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005536\|Ga0070697_100429131	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300005545\|Ga0070695_100393559	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005546\|Ga0070696_101158127	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005558\|Ga0066698_11107371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005561\|Ga0066699_10080389	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300005598\|Ga0066706_10956872	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia caeni	663	Open in IMG/M
3300005719\|Ga0068861_102167539	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005764\|Ga0066903_100321680	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300005764\|Ga0066903_100790421	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005944\|Ga0066788_10108664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005952\|Ga0080026_10195863	All Organisms → cellular organisms → Archaea → Euryarchaeota	597	Open in IMG/M
3300005993\|Ga0080027_10334057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300006797\|Ga0066659_10227792	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300006854\|Ga0075425_101248525	Not Available	843	Open in IMG/M
3300006854\|Ga0075425_103035237	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006903\|Ga0075426_10070680	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300006904\|Ga0075424_101709015	Not Available	666	Open in IMG/M
3300009012\|Ga0066710_100198133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2856	Open in IMG/M
3300009029\|Ga0066793_10263840	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300009038\|Ga0099829_10463428	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009088\|Ga0099830_11264928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300009089\|Ga0099828_10081281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	2766	Open in IMG/M
3300009089\|Ga0099828_10562742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300009090\|Ga0099827_11225743	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009137\|Ga0066709_100472925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1758	Open in IMG/M
3300009792\|Ga0126374_10248601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1159	Open in IMG/M
3300009792\|Ga0126374_10478221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300010046\|Ga0126384_11663106	Not Available	603	Open in IMG/M
3300010047\|Ga0126382_11623952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300010359\|Ga0126376_10407874	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300010359\|Ga0126376_11165527	Not Available	783	Open in IMG/M
3300010360\|Ga0126372_10022171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3777	Open in IMG/M
3300010880\|Ga0126350_10579380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2018	Open in IMG/M
3300010880\|Ga0126350_11311793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300011270\|Ga0137391_10234707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1591	Open in IMG/M
3300011270\|Ga0137391_10680782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300011444\|Ga0137463_1033685	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300011444\|Ga0137463_1170824	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012096\|Ga0137389_10482597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300012199\|Ga0137383_11081465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012201\|Ga0137365_10326233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300012204\|Ga0137374_10130510	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300012204\|Ga0137374_10154243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2045	Open in IMG/M
3300012204\|Ga0137374_10398015	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012350\|Ga0137372_10014252	All Organisms → cellular organisms → Bacteria → Acidobacteria	7563	Open in IMG/M
3300012350\|Ga0137372_10816029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300012350\|Ga0137372_11092299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012354\|Ga0137366_10090442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2324	Open in IMG/M
3300012354\|Ga0137366_10761546	Not Available	688	Open in IMG/M
3300012355\|Ga0137369_10009068	All Organisms → cellular organisms → Bacteria → Acidobacteria	9890	Open in IMG/M
3300012356\|Ga0137371_10742375	Not Available	750	Open in IMG/M
3300012360\|Ga0137375_10829801	Not Available	741	Open in IMG/M
3300012363\|Ga0137390_11802964	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012923\|Ga0137359_10128666	All Organisms → cellular organisms → Bacteria → Acidobacteria	2250	Open in IMG/M
3300012931\|Ga0153915_10004963	All Organisms → cellular organisms → Bacteria	12332	Open in IMG/M
3300012948\|Ga0126375_10599374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300012957\|Ga0164303_10868615	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012971\|Ga0126369_10817963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300015085\|Ga0167632_1008550	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300015168\|Ga0167631_1013220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300015371\|Ga0132258_11731596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1576	Open in IMG/M
3300015371\|Ga0132258_12066829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300015371\|Ga0132258_12481275	Not Available	1297	Open in IMG/M
3300015371\|Ga0132258_12819483	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300015373\|Ga0132257_100746014	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300018064\|Ga0187773_10681748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300018077\|Ga0184633_10034086	All Organisms → cellular organisms → Bacteria → Acidobacteria	2564	Open in IMG/M
3300018482\|Ga0066669_11355125	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300020004\|Ga0193755_1064825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300021432\|Ga0210384_10172831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1941	Open in IMG/M
3300021445\|Ga0182009_10079327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1458	Open in IMG/M
3300021478\|Ga0210402_10847732	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300025910\|Ga0207684_10008283	All Organisms → cellular organisms → Bacteria	9255	Open in IMG/M
3300025910\|Ga0207684_10794429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300025922\|Ga0207646_11162023	Not Available	678	Open in IMG/M
3300025961\|Ga0207712_11636917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300027583\|Ga0209527_1076265	Not Available	754	Open in IMG/M
3300027587\|Ga0209220_1109252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300027667\|Ga0209009_1000058	All Organisms → cellular organisms → Bacteria	49833	Open in IMG/M
3300027674\|Ga0209118_1071256	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027875\|Ga0209283_10728805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300027882\|Ga0209590_10218428	Not Available	1209	Open in IMG/M
3300027882\|Ga0209590_10958027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300027910\|Ga0209583_10728818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	520	Open in IMG/M
3300028803\|Ga0307281_10153432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300031720\|Ga0307469_10272976	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300031740\|Ga0307468_100606629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300031820\|Ga0307473_10124500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300032174\|Ga0307470_11528418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300032174\|Ga0307470_11909053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032180\|Ga0307471_100885628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300032180\|Ga0307471_100885822	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300032180\|Ga0307471_101286907	Not Available	894	Open in IMG/M
3300032180\|Ga0307471_102977826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300032205\|Ga0307472_100640900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300032770\|Ga0335085_11208706	Not Available	803	Open in IMG/M
3300032782\|Ga0335082_10267926	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300033407\|Ga0214472_11515214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300033433\|Ga0326726_10114299	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300033433\|Ga0326726_12465609	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300034125\|Ga0370484_0197629	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.83%
Host-Associated	Host-Associated	9.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.83%
Plants	Host-Associated → Plants	9.17%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.17%
Sediment	Environmental → Aquatic → Sediment	3.33%
Peat	Environmental → Terrestrial → Peat	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Marine	Environmental → Aquatic → Marine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.33%
Loam	Environmental → Terrestrial → Soil → Loam	24.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.67%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.67%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300001145	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00550560	2088090004	Soil	VQATARALQLLGLVVTGAGFFSGVLGGNVRLELSLLAAGAAIFFLGRWMEKSGR
JGI12682J13319_10009322	3300001145	Forest Soil	VQATARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAIFFLGRWMEKRG*
Ga0055440_100880331	3300004020	Natural And Restored Wetlands	LYRLARALQLSGLVVTGIGLWQGLLGGNVRLELGLLGAGAAIFFSGRWLQGSAR*
Ga0066388_1000769192	3300005332	Tropical Forest Soil	VHATGRTLQLMGLVVTGVGLFLGLLQGNVRGELVLLAIGAGVFFSGRLLEKRGGGA*
Ga0066388_1015263092	3300005332	Tropical Forest Soil	VYLLARGLQLTGLVVTGVGLWQGLLGGNVRLELALLAVGAAIFFGGRWLQAAR*
Ga0066388_1028669462	3300005332	Tropical Forest Soil	VHAAGRTLQFLGLLVTGVGFFLGVLGGNVRGELALLAVGAALFFGGRALEKRGAGG*
Ga0070694_1001996492	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPGAARILQLIGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIFFLGRLIQNRR*
Ga0070708_10000158811	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRAAARALQLLGIVVTGVGFFTGVLGGNVRLELVLLGVGAAIFFLGRGLQKSAR*
Ga0070708_1000125645	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHATARALQLLGLVVSGAGFFSGVIGGNTRLELALLAVGAAMFFLGRRLEKSSS*
Ga0070708_1001445342	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRVAGRTLQLLGLVVTGVGFFLGVLGGNVRGELALLAVGAGVFFGGRVLEKGGPRR*
Ga0070708_1001457682	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHATGRMLQLLGLLVTGIGFFLGVLGGNVRGELALLVVGAGIFFGGRAVEKRGAGG*
Ga0070708_1005617732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAGRMLQMLGLVVTGAGFFVGVLGGNVRGELVLLAVGAGVFFGGRALEKGGPGR*
Ga0070708_1006153961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHEAARVLQLLGLIVAGAGFFSGVIGGNVRLELALLGVGAAVFFLGRLIQKSER*
Ga0070708_1019201421	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHEVARVLQLLGLVVSAAGFFSGVIGGNTRLELVLLGVGAAIFFLGRLIEKSAR*
Ga0070706_1021804401	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CREPREERLSVYAAGRTLQFLGLLVTGIGFFQGVADGNARRELALLALGAALFFGGRLVQARGGRP*
Ga0070707_1003765921	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LAGRMLQMLGLVVTGAGFFVGVLGGNVRGELVLLAVGAGVFFGGRALEKGGPGR*
Ga0070707_1017857362	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQATARALQLLGLVVTGVAFFSGVLGGNVRLELSLLAAGAAIFFLGRWMEKRS*
Ga0070698_1002303883	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VRAAARVLQLLGIVVTGVGFFTGVLGGNVRLELVLLGVGAAIFFLGRGLQKSAR*
Ga0070698_1022239512	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VYAAGRTLQFLGLLVTGIGFFQGVADGNARRELALLALGAALFFGGRLVQA
Ga0070697_1004291312	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VYSASRALQFLGLVVTGFGFFAGVLGGNVRGELVLLGFGAGIFFAGRLLQTRWSGK*
Ga0070695_1003935592	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VPGAARILQLLGLVVSGAGFFSGVIGGNVRLELVLLGIGAAIFFLGRLLQQKSAK*
Ga0070696_1011581272	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHAAGRLLELLGLVVTGLGFFAGVLGGNVRGELALLAVGAALFFLGRWLETSRK*
Ga0066698_111073712	3300005558	Soil	VRAAARALQVAGLVVTGVGFFSGVLGGNVRLELVFLAVGAAIFFTGRALQKSRS*
Ga0066699_100803892	3300005561	Soil	MRLAGRILQMLGLVVTGVGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR*
Ga0066706_109568722	3300005598	Soil	VPGAARLLQLLGLVVSGAGFFSGVIGGNVRLELALLGIGAAIFFLGRLIQKSSG*
Ga0068861_1021675391	3300005719	Switchgrass Rhizosphere	QVLGLLVAGAGFFGGVIGGNTRLELVLLGAGAAIFFLGRTLQKSVR*
Ga0066903_1003216802	3300005764	Tropical Forest Soil	LYALGRTLQFLGILVTGIGFFWGIFQGNTRGELTMLAVGAGLFFGGRMVEKRGAGG*
Ga0066903_1007904212	3300005764	Tropical Forest Soil	MHTAGRSLQFAGLVVTGLAFFAGVLGGNVRLELALLGVGAVIFFSGRWLERRAG*
Ga0066788_101086642	3300005944	Soil	MYTAARALQFLGLVVTGLGFFAGVLGGNIRGELTLLGLGAALFFGGRLVQTRGAKP*
Ga0080026_101958632	3300005952	Permafrost Soil	MYSLARGLQFLGLVVAGLGFFVGVLGDNVRGELALLGVGAGLFFGGRFLQGRGAGR*
Ga0080027_103340571	3300005993	Prmafrost Soil	MYTAARALQFLGLVVTGLGFFAGVFGGNIRGELTLLGLGAALFFGGRLVQTRGAKP*
Ga0066659_102277922	3300006797	Soil	MRLAGRILQMLGLVVTGVGFFLGVLGGNVRGELTLLAVGAGVFFGGRALEKGGPGR*
Ga0075425_1012485252	3300006854	Populus Rhizosphere	VHALARGLQLIGLLVSGIGFFEGVLGGNVRGELALLAVGAAIFFSGRWLQAARR*
Ga0075425_1030352371	3300006854	Populus Rhizosphere	VPGAARILQLLGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIFFLGRRLQNSGK*
Ga0075426_100706801	3300006903	Populus Rhizosphere	RGLQLIGLLVSGIGFFEGVLGGNVRGELALLAVGAAIFFSGRWLQAARR*
Ga0075424_1017090152	3300006904	Populus Rhizosphere	MYAAARTLQFLGLVVTGFAFFSGVLGGEVRRELGLLALGAAIFFGGRWLQSRQR*
Ga0066710_1001981332	3300009012	Grasslands Soil	VRAAARALQVAGLVVTGVGFFSGVLGGNVRLELVFLAVGAAIFFTGRALQKSRS
Ga0066793_102638402	3300009029	Prmafrost Soil	VQAAARALQLLGLIVTGIGFFSGVLGGNVRIELSLLAAGAALFFLGRWMEKRS*
Ga0099829_104634282	3300009038	Vadose Zone Soil	MLQLLGLVVTGVGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR*
Ga0099830_112649282	3300009088	Vadose Zone Soil	MLQLLGLVVTGAGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR*
Ga0099828_100812812	3300009089	Vadose Zone Soil	LQLLGLVVTGVGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR*
Ga0099828_105627422	3300009089	Vadose Zone Soil	MYAAGRALQLLGLLVTGVGFFLGVMGGNIRGELALLAVGAALFFGGRTVEKRGARR*
Ga0099827_112257432	3300009090	Vadose Zone Soil	MRLAGRTLQLLGLVVTGIGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR*
Ga0066709_1004729252	3300009137	Grasslands Soil	LLGLVVSGAGFFSGVIGGNVRLELVLLAVGAAIFFLGRLIQKSSG*
Ga0126374_102486012	3300009792	Tropical Forest Soil	MHAAGRTLQFLGLIVTGVGLFLGVLGGNVRGELALLAVGAALFFGGRALEKRGAGG*
Ga0126374_104782211	3300009792	Tropical Forest Soil	VHATGRTLQLMGLVVTGVGLFLGLLQGNVRGELVLLAIGAGVFFSGRLLEK
Ga0126384_116631062	3300010046	Tropical Forest Soil	LQLLGLVVTGVGFFTGVLGGNTRLELTLLAVGAAIFFLGRALQKK*
Ga0126382_116239521	3300010047	Tropical Forest Soil	MVGRALQLLGLVVTGVGFFTGVLGGNTRLELALLATGAAIFFLGRALQKKS*
Ga0126376_104078741	3300010359	Tropical Forest Soil	HHAGHGDGESIVPRALQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRALRKK
Ga0126376_111655272	3300010359	Tropical Forest Soil	MRAAALGLQLLGLVVAGAGFFAGVLGDNVRLELALLAAGAAVFFLGRSLQKK*
Ga0126372_100221713	3300010360	Tropical Forest Soil	VHATGRTLQLMGLVVTGVGLFLGLLQGNVRGELVLLAIGAGVFFSGRLLEKKGGGA*
Ga0126350_105793804	3300010880	Boreal Forest Soil	LYKAGRLLQFLGLVVTGVAFFRGAVGGNVRQELALLAAGAAVFFAGRLAQGARS*
Ga0126350_113117932	3300010880	Boreal Forest Soil	LSGLVVSGAGFFSGVIGGNVRLELVLLCAGAAIFFLGRLIQK*
Ga0137391_102347072	3300011270	Vadose Zone Soil	MQFAGLIVTGLAFFAGVLGGDVRRELALLALGAAIFFLGRGLEKTGR*
Ga0137391_106807822	3300011270	Vadose Zone Soil	MLQLLGLVVTGVGFFVGVLGGNVRGELTLLAVGAGVFFGGRALEKGGPGK*
Ga0137463_10336852	3300011444	Soil	VQATARALQLLGLVVTGVGFFSGLLGGNVRLELSLLAAGAAIFFLGRWMEKRG*
Ga0137463_11708242	3300011444	Soil	MHATARALELLGLVVTGVGFFSGVLGGNVRLELALLAAGAAVFFLGRRLEKTAR*
Ga0137389_104825972	3300012096	Vadose Zone Soil	MQFAGLVATGLAFFAGVLGGDVRRELALLALGAAIFFVGRALEKRAR*
Ga0137383_110814652	3300012199	Vadose Zone Soil	MLQMLGLVVTGVGFFLGVLGGNVRGELTLLAVGAGVFFGGRALEKGGPGR*
Ga0137365_103262331	3300012201	Vadose Zone Soil	LQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFFGRWLGKRER*
Ga0137374_101305102	3300012204	Vadose Zone Soil	VHAPARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFLGRWLEKRAR*
Ga0137374_101542432	3300012204	Vadose Zone Soil	LQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFLGRWLEKRAR*
Ga0137374_103980152	3300012204	Vadose Zone Soil	VHAPARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFFGRWLEKRAE*
Ga0137372_100142526	3300012350	Vadose Zone Soil	LQLLGLVVTGVGFFSGVLGGNVRLELSLLTAGAAVFFFGRWLEKRAR*
Ga0137372_108160292	3300012350	Vadose Zone Soil	VLAPARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAVGAAVFFFGRWLEKRAR*
Ga0137372_110922992	3300012350	Vadose Zone Soil	LRAAALALQLLGLVVAGAGFFAGVLGDNVRLELALLAAGAAVFFLGRALQKK*
Ga0137366_100904422	3300012354	Vadose Zone Soil	MRLAGRMLQLLGLVVTGVGFFLGVLGGNVRGELVLLAVGAGVFFGGRALEKGSPGR*
Ga0137366_107615461	3300012354	Vadose Zone Soil	VSGVGFFTGVLGGNVRLELVLLAAGAAVFFLGRALQKSAR*
Ga0137369_100090681	3300012355	Vadose Zone Soil	LQLLGLIVTGVGFFSGVLGGNVRLELSLLAAGAAVFFLGRWLEKRAR*
Ga0137371_107423752	3300012356	Vadose Zone Soil	APVHAPARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAVFFFGRWLGKRER*
Ga0137375_108298012	3300012360	Vadose Zone Soil	VRAAARALQFAGLVLTGVAFFAGVLGGNVRGELALAAAGAALFFLGRGMEKRTG*
Ga0137390_118029642	3300012363	Vadose Zone Soil	LLGLVVTGVGFFVGVLGGNVRGELTLLAVGAGVFFGGRALEKGGPGR*
Ga0137359_101286664	3300012923	Vadose Zone Soil	LLGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIFFLGRLIQKSSN*
Ga0153915_1000496311	3300012931	Freshwater Wetlands	MIVTGVGFFTGVLGGNVRLELALLVVGAATFFLGRALQKSAR*
Ga0126375_105993742	3300012948	Tropical Forest Soil	MVARTLQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRALQKK*
Ga0164303_108686152	3300012957	Soil	VYALARALQFLGLVVTGFGFFVGVFGGNVRGELALLGVGAALFFGGRLLQERGAGK*
Ga0126369_108179631	3300012971	Tropical Forest Soil	LYALGRTLQFLGILVTGIGVCWGIFQGNTRGELTMLAVGAGLFFGGRMVEKRGAGG*
Ga0167632_10085502	3300015085	Glacier Forefield Soil	MYSFARALQFLGLLVTGFGFFTGVLGGNVRGELVLLAVGAGIFFGGRFLQVRGSGK*
Ga0167631_10132203	3300015168	Glacier Forefield Soil	MYPAARALQFLGLVITGFGFFAGVLGGNVRGELALLAVGAGVFFGGRYLQTRGTGR*
Ga0132258_117315961	3300015371	Arabidopsis Rhizosphere	MFPRALQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRALQKK*
Ga0132258_120668292	3300015371	Arabidopsis Rhizosphere	VPARALQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRGLQKK*
Ga0132258_124812751	3300015371	Arabidopsis Rhizosphere	RALQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRALQRK*
Ga0132258_128194832	3300015371	Arabidopsis Rhizosphere	LQFLGLVVTGFGFFVGVFGGNVRGELSLLGVGAALFFGGRLLQERGAGK*
Ga0132257_1007460142	3300015373	Arabidopsis Rhizosphere	MFPRALQLLGLVVTGVGFFTGVLGGNTRLELALLAVGAAIFFLGRALQRK*
Ga0187773_106817482	3300018064	Tropical Peatland	VRAAARALQLLGLVVTGAGFFSGVLGGNIRLELALLAAGAAIFLAGRGLQNRAG
Ga0184633_100340862	3300018077	Groundwater Sediment	MYRLARVLQLLGLLVTGFAFFEGVLGGNVRREVVLLGLGAAIFFSGRALQGKRP
Ga0066669_113551252	3300018482	Grasslands Soil	MRLAGRILQMLGLVVTGVGFFLGVLGGNVRGELTLLAVGAGVFFGGRALEKGGPGR
Ga0193755_10648252	3300020004	Soil	VHATARVLQLLGLIVTGVGFFSGVLGGNVRLELAMLTVGAAIFFLGRWLDKSSS
Ga0210384_101728314	3300021432	Soil	VRVAGRTLQFLGLVVTGVGFFLGVLGGNVRGELVLLAVGAGVFFGGRTLEKGRPGR
Ga0182009_100793272	3300021445	Soil	VYAVARALQFLGLVVTGFGFFVGVFGGNVRGELALLGVGAALFFAGRLLQQRGAGK
Ga0210402_108477322	3300021478	Soil	LYKAGRLLQFLGLVVTGVAFFRGAVGGNVRQELALLAAGAAVFFAGRLAQGARS
Ga0207684_100082839	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAGRMLQMLGLVVTGAGFFVGVLGGNVRGELVLLAVGAGVFFGGRALEKGGPGR
Ga0207684_107944291	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTGVGFFTGVLGGNVRLELVLLGVGAAIFFLGRGLQKSAR
Ga0207646_111620232	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHATGRMLQLLGLLVTGIGFFLGVLGGNVRGELALLVVGAGIFFGGRAVEKRGAGG
Ga0207712_116369172	3300025961	Switchgrass Rhizosphere	VPGAARILQLIGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIFFLGRLIQNRR
Ga0209527_10762652	3300027583	Forest Soil	GLVVTGFGFFAGVLDGNVRGELVLLAFGAGIFFAGRLLQTRWSGK
Ga0209220_11092522	3300027587	Forest Soil	VYSASRALQFLGLVVTGFGFFAGVLGGNVRGELVLLGFGAGIFFAGRLLQTRWSGK
Ga0209009_100005835	3300027667	Forest Soil	VQATARALQLLGLVVTGVGFFSGVLGGNVRLELSLLAAGAAIFFLGRWMEKRG
Ga0209118_10712562	3300027674	Forest Soil	VYSASRALQFLGLVVTGFGFFAGVLGGNVRGELVLLAFGAGIFFAGRLLQTRWSGK
Ga0209283_107288052	3300027875	Vadose Zone Soil	MRLAGRTLQLLGLVVTGVGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR
Ga0209590_102184282	3300027882	Vadose Zone Soil	MYAAGRTLQLLGLLVTGVGFFLGVLGGNVRGELALLAVGAAIFFGGRAVEKRGAGR
Ga0209590_109580272	3300027882	Vadose Zone Soil	MRLAGRTLQLLGLVVTGIGFFLGVLGGNVRGELALLAVGAGVFFGGRALEKGGPGR
Ga0209583_107288181	3300027910	Watersheds	MHAAARALELVGLVVTGVGFFSGVLGGNVRLELVLLAAGAAVFFLGRRLER
Ga0307281_101534322	3300028803	Soil	VQATARALQLLGLVVTGAGFFSGVLGGNVRLELSLLAAGAAIFFLGRWMEKKH
Ga0307469_102729762	3300031720	Hardwood Forest Soil	VPGAARILQLLGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIIFLGRLIQNRR
Ga0307468_1006066292	3300031740	Hardwood Forest Soil	VPGAARILQLLGLVVSGAGFFSGVIGGNVRLELVLLGVGAAIFFLGRLIQNRR
Ga0307473_101245002	3300031820	Hardwood Forest Soil	VRATGRALQFIGLVVTGLAFFAGALGGNVRLELALLGVGAAVFFSGRAVEKRRS
Ga0307470_115284182	3300032174	Hardwood Forest Soil	VYALARALQFLGLVVTGFGFFVGVLRSNVRGELALLGVGAALFFGGRLLQERGAGK
Ga0307470_119090532	3300032174	Hardwood Forest Soil	LQLLGLIVTGVGFFLGLLGGNVRGELALLAVGAAVFFSGRFFEKGGGGSR
Ga0307471_1008856282	3300032180	Hardwood Forest Soil	VQATARALQLLGLVVTGVAFFSGVLGGNVRLELSLLAGGAAIFFLGRWMEKRS
Ga0307471_1008858222	3300032180	Hardwood Forest Soil	MYLLGRSLQLLGLLVTGVGFFLGLLGGNVRGELALLALGAAVFFSGRFFEKGGGGSR
Ga0307471_1012869072	3300032180	Hardwood Forest Soil	VYAAARTLQFLGLIVTGIGFFSGVGTGNVRRELLLLAVGASLFFGGRWLQSRAGAD
Ga0307471_1029778261	3300032180	Hardwood Forest Soil	MDNYSIARALQFLGLIVTGFGFFAGVIGGNVRGELALLAVGAAIFFGGRWLQTHRVG
Ga0307472_1006409001	3300032205	Hardwood Forest Soil	VRATGRALQFIGLVVTGLAFFAGALGGNVRLELALLGVGAAVF
Ga0335085_112087062	3300032770	Soil	QLFGLVVTGVGLWEGVLGGNVRLELALLGVGAAVFFTGRWLQGASR
Ga0335082_102679262	3300032782	Soil	MHAAARSLELLGLVVTGVGFFSGVLGGNIRLELALLAAGAAIFFVGRRLEKTAR
Ga0214472_115152141	3300033407	Soil	VHAPARALQLLGLIVTGVGFFSGVLGGNVRLELSLLAAGAAVFFLGRWLGKRAR
Ga0326726_101142992	3300033433	Peat Soil	MHAAARALELVGLVVTGVGFFSGVLGGNVRLELALLAAGAAVFFLGRRLEKNAR
Ga0326726_124656092	3300033433	Peat Soil	MHAAARTLELLGLVVTGVGFFSGVLGGNIRLELALLAAGAAVFFLGRRLERTAR
Ga0370484_0197629_111_281	3300034125	Untreated Peat Soil	MYTAARALQFLGLVVTGLGFFAGVLGSNIRGELTLLGLGAALFFGGRLVQTRGAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073309

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences