Metagenome / Metatranscriptome Family F073291

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073291
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	65 residues
Representative Sequence	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAVGFALAAITVMLVERFGHVMAYWLVAGGL
Number of Associated Samples	97
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.46 %
% of genes near scaffold ends (potentially truncated)	86.67 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.56% β-sheet: 0.00% Coil/Unstructured: 34.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05957	DUF883	27.50
PF03631	Virul_fac_BrkB	13.33
PF13565	HTH_32	0.83
PF00884	Sulfatase	0.83
PF01797	Y1_Tnp	0.83
PF01380	SIS	0.83
PF05974	DUF892	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	27.50
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	13.33
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.83
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.83 %
Unclassified	root	N/A	8.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	90.83 %
Unclassified	root	N/A	8.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.50 %
Unclassified	root	N/A	8.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	29.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Unclassified	root	N/A	8.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	25.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Unclassified	root	N/A	8.33 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	3.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Unclassified	root	N/A	8.33 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.33 %
Hyphomicrobium nitrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	0.83 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Unclassified	root	N/A	8.33 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.33 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.83 %
Hyphomicrobium nitrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111006\|2214662744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	514	Open in IMG/M
3300004156\|Ga0062589_101104658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	750	Open in IMG/M
3300004643\|Ga0062591_102908909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	508	Open in IMG/M
3300005340\|Ga0070689_100855812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	802	Open in IMG/M
3300005434\|Ga0070709_10554968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	879	Open in IMG/M
3300005441\|Ga0070700_100631416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300005454\|Ga0066687_10997327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	500	Open in IMG/M
3300005466\|Ga0070685_10501171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	859	Open in IMG/M
3300005536\|Ga0070697_100671557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	913	Open in IMG/M
3300005577\|Ga0068857_101413350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	677	Open in IMG/M
3300005764\|Ga0066903_100862216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1632	Open in IMG/M
3300005843\|Ga0068860_101809929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	632	Open in IMG/M
3300005843\|Ga0068860_101836452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	628	Open in IMG/M
3300005983\|Ga0081540_1334796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	518	Open in IMG/M
3300006038\|Ga0075365_10448961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	910	Open in IMG/M
3300006058\|Ga0075432_10354885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	622	Open in IMG/M
3300006800\|Ga0066660_11521321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	527	Open in IMG/M
3300006806\|Ga0079220_11093897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	645	Open in IMG/M
3300006844\|Ga0075428_100037069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5370	Open in IMG/M
3300006844\|Ga0075428_100605215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300006844\|Ga0075428_101450702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	720	Open in IMG/M
3300006846\|Ga0075430_100579309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	926	Open in IMG/M
3300006852\|Ga0075433_11474664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	588	Open in IMG/M
3300006853\|Ga0075420_101174926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	659	Open in IMG/M
3300009094\|Ga0111539_10700606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1179	Open in IMG/M
3300009094\|Ga0111539_12044295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300009094\|Ga0111539_12517968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300009147\|Ga0114129_11304162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300009162\|Ga0075423_11023925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300009162\|Ga0075423_11869803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300009176\|Ga0105242_13204155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300009177\|Ga0105248_10369990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1614	Open in IMG/M
3300009553\|Ga0105249_12133478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300009553\|Ga0105249_12294175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300009609\|Ga0105347_1034812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1768	Open in IMG/M
3300010046\|Ga0126384_11277069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300010371\|Ga0134125_12417542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	571	Open in IMG/M
3300010375\|Ga0105239_11103214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	913	Open in IMG/M
3300010397\|Ga0134124_12198482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300010400\|Ga0134122_12728191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300010401\|Ga0134121_12495451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	559	Open in IMG/M
3300010403\|Ga0134123_12196088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300011332\|Ga0126317_10731872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	936	Open in IMG/M
3300011333\|Ga0127502_10958078	Not Available	524	Open in IMG/M
3300011403\|Ga0137313_1044303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300011443\|Ga0137457_1094628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300012212\|Ga0150985_102948456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	515	Open in IMG/M
3300012469\|Ga0150984_102046466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300012957\|Ga0164303_10151863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	1227	Open in IMG/M
3300012961\|Ga0164302_10514394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300012971\|Ga0126369_13584655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300012985\|Ga0164308_11433814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300013306\|Ga0163162_10728105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1112	Open in IMG/M
3300014255\|Ga0075320_1024450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300014968\|Ga0157379_11458987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300015077\|Ga0173483_10668769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300015077\|Ga0173483_10786384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300015371\|Ga0132258_11999572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M
3300015372\|Ga0132256_102388087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300015373\|Ga0132257_100417396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1634	Open in IMG/M
3300015373\|Ga0132257_101441173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300015374\|Ga0132255_100187103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2920	Open in IMG/M
3300016357\|Ga0182032_10021159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	3787	Open in IMG/M
3300018027\|Ga0184605_10496268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	532	Open in IMG/M
3300018061\|Ga0184619_10189418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	944	Open in IMG/M
3300018071\|Ga0184618_10321687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	660	Open in IMG/M
3300018073\|Ga0184624_10477610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300018466\|Ga0190268_11130954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300018466\|Ga0190268_11631801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300018466\|Ga0190268_11902977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300018469\|Ga0190270_12216362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300018469\|Ga0190270_13018808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300018481\|Ga0190271_13293466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300020579\|Ga0210407_11278146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300021405\|Ga0210387_11363745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300022756\|Ga0222622_11345449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300025911\|Ga0207654_10876509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300025942\|Ga0207689_10985232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	711	Open in IMG/M
3300025961\|Ga0207712_10038424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3273	Open in IMG/M
3300026023\|Ga0207677_11580892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300026088\|Ga0207641_12333363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	534	Open in IMG/M
3300027743\|Ga0209593_10227440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300027765\|Ga0209073_10325844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300027907\|Ga0207428_10177431	Not Available	1611	Open in IMG/M
3300027907\|Ga0207428_10713264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300027909\|Ga0209382_11054164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300028380\|Ga0268265_10143036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2005	Open in IMG/M
3300028381\|Ga0268264_11899616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300030903\|Ga0308206_1030512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300030903\|Ga0308206_1198799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300031058\|Ga0308189_10049946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300031058\|Ga0308189_10105423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300031058\|Ga0308189_10270948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300031092\|Ga0308204_10163769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300031092\|Ga0308204_10261624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300031093\|Ga0308197_10075788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	939	Open in IMG/M
3300031097\|Ga0308188_1025401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031184\|Ga0307499_10122120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300031184\|Ga0307499_10155055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300031198\|Ga0307500_10088822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	812	Open in IMG/M
3300031543\|Ga0318516_10483278	Not Available	711	Open in IMG/M
3300031545\|Ga0318541_10070606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1831	Open in IMG/M
3300031740\|Ga0307468_101965271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300031833\|Ga0310917_10801804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300031847\|Ga0310907_10671913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031847\|Ga0310907_10891686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300031946\|Ga0310910_10865725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300032005\|Ga0307411_10757702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300032013\|Ga0310906_10325604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	991	Open in IMG/M
3300032043\|Ga0318556_10439186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300032059\|Ga0318533_10289507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1187	Open in IMG/M
3300033550\|Ga0247829_10397918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1132	Open in IMG/M
3300034818\|Ga0373950_0021008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1152	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.00%
Host-Associated	Host-Associated	40.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.83%
Plants	Host-Associated → Plants	40.00%
Aquatic	Environmental → Aquatic	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.33%
Sediment	Environmental → Aquatic → Sediment	6.67%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.67%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2213686465	2209111006	Arabidopsis Rhizosphere	VFAGLIHQAKSAVSGLVLRYVARASVAVPFIIALGFALAAITVMLVERFGHVMAYWLVAGGLALIGIVAS
Ga0062589_1011046581	3300004156	Soil	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVMAYWLVAGGL
Ga0062591_1029089091	3300004643	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWLVAGGLALIGVIASI
Ga0070689_1008558121	3300005340	Switchgrass Rhizosphere	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVMAYWLVAG
Ga0070709_105549683	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VFAGLINQAKSAASHLVRKYVARASVAVPFVIASGFALAAITVMLVERFGHVMAYWLVTGGLALIGIIASVAVSVK
Ga0070700_1006314161	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MFAGLINQAKSAVSRLVLQYVARASVAVPFIVAVGFALAAITVLLVNRFGHAAAYAMMAGGLAAIGT
Ga0066687_109973271	3300005454	Soil	VFAGLIHQAKSAVSGLVLKYVARASVAVPFIIALGFALAAITVMLVERFGHVMAYWLVAGGLALIGIVASIVVSVKE
Ga0070685_105011713	3300005466	Switchgrass Rhizosphere	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVMAYWLVAGGLALIGIVASIVVAVK
Ga0070697_1006715573	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAAVTVMLVERFGHVIAYWL
Ga0068857_1014133501	3300005577	Corn Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWVVAGGLA
Ga0066903_1008622161	3300005764	Tropical Forest Soil	LFAGLIQHAREAASHLLLRYVARASVAVPFIVALGFAIAAIAVMLVDRFGHVTAYWIMAAGLAILGVLAAIVVSVKE
Ga0068860_1018099291	3300005843	Switchgrass Rhizosphere	VFQGLINSAKTAVSSLILKYVARASVAVPFVIALSFALAAIAAMLVDRFGHITGYWLMAGGLAAI
Ga0068860_1018364521	3300005843	Switchgrass Rhizosphere	MFQGLINNAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVNRFGQITAYWTIAAGLALAGVLAAI
Ga0081540_13347962	3300005983	Tabebuia Heterophylla Rhizosphere	VFQGLINSAKTAVSSLILKYVARASVAVPFVIALGFALAAIAAMLVDHFDYIAGYWLMAGGLAAIG
Ga0075365_104489612	3300006038	Populus Endosphere	VFAGLINRAKSAAGQLVLKYVARASVAVPFVIAAGFGLAAITVMLVERFGHVWPTGWWQEASL*
Ga0075432_103548851	3300006058	Populus Rhizosphere	VFAGLIDQAKAAVARLLLEYVARASVAVPFVIALGFGLAAITLMLVQYFGHTAAYWM
Ga0066660_115213212	3300006800	Soil	VFAGLIHQAKSAVSGLVLKYVARASVAVPFIIALGFALAAITVMLVERFGHVMAYWLVAGGLALIGIVASIVVSVKEH
Ga0079220_110938971	3300006806	Agricultural Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFAIAALTVMLVERFGHVMAYWLVAGGLALIGVI
Ga0075428_1000370691	3300006844	Populus Rhizosphere	VFQGLINSAKTAVSSLILKYVARASVAVLFVIALSFALAAIAAMLVDRFGHIAGYWLMAG
Ga0075428_1006052153	3300006844	Populus Rhizosphere	VFAGLLNQAKSAVSGLVLKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWLVAGGLAA
Ga0075428_1014507021	3300006844	Populus Rhizosphere	VFAGLLNQAKSAISGLVLKYVARASVAVPFVIAAGFALAAITVMLVERFGHVM
Ga0075430_1005793091	3300006846	Populus Rhizosphere	MFAGLINQAKSAVSHLVLQYVARASVAVPFIIAFGFALAAITVLLVNRFGHAAAYAMMAGGLVAIGIVAAIVV
Ga0075433_101129224	3300006852	Populus Rhizosphere	VFQGLINSAKTAVSSLILKYVARASVAIPFVIALGFALAAIIDRFGHITG*
Ga0075433_114746643	3300006852	Populus Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFAIAALTVMLIERFGHVMAYWLVAGGL
Ga0075420_1011749261	3300006853	Populus Rhizosphere	VFAGLLNQAKSAVSGLVLKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWLVAGGLAAI
Ga0111539_107006061	3300009094	Populus Rhizosphere	VFAGLINQAKSAASHLILKYVARASVAVPFIIAAGFALAAVTVMLVERFGHIKAYGLVAGGFAFIGVVASIVVS
Ga0111539_120442951	3300009094	Populus Rhizosphere	VFQGLINSSKTAVSSLVLKYVARASVAVPFVIALGFALAAIAAMLVDRFGHITGCWLMAGGLTAIGAI
Ga0111539_120641482	3300009094	Populus Rhizosphere	VFAGLINQARSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWMVAGGLALIGVIASVVVSRKEHE
Ga0111539_125179681	3300009094	Populus Rhizosphere	MFAGLINQAKSAVSRLVLQYVARASVAVPFIGAVGFGLAAITVVLVSSFGHAAADAMMVGGLAGIGVG
Ga0114129_113041621	3300009147	Populus Rhizosphere	MFAGLINQAKSAVNRLVLQYVARASVAVPFIVAVGFALAAITVLLVNRFGHAAAYAMM
Ga0075423_110239253	3300009162	Populus Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAVGFALAAITVMLVERFGHVMAYWLVAGGL
Ga0075423_118698031	3300009162	Populus Rhizosphere	VFAALINRAKSAAGQLVLKYVARASVAVPFVIAAGFALAAITVMLVHRFGHVMAYWLVA
Ga0105242_132041551	3300009176	Miscanthus Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERYGHVMAY
Ga0105248_103699901	3300009177	Switchgrass Rhizosphere	VFAGLINQAKSAASHLVLRYAARLSVAVPFVIAAGFALAAITVMLVDRFGHVIAYWLLAGGL
Ga0105249_121334781	3300009553	Switchgrass Rhizosphere	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVMAYWLVAGGLA
Ga0105249_122941752	3300009553	Switchgrass Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWLVAGGLALIGVIASIVVSV
Ga0105347_10348125	3300009609	Soil	VNHAKAAASGLVLKYVARASVAVPFVIALGFALAAITVMLVQRFGHVTGCSASAT*
Ga0126384_112770692	3300010046	Tropical Forest Soil	LFAGLIHHAREAASHLVLRYVARASVALPFIVALGFAIAAIAVMLVDRFGHVTAYWIMAGGLVVLGVLAAVALSIKEHGGQL
Ga0134125_124175422	3300010371	Terrestrial Soil	VFAGLINQAKSAASHFVLKYVARASVAVPFVIAIGFALAAITVMLVERFGHVMAYWLVAGGLALIGAIAAIVVSVR*
Ga0105239_111032143	3300010375	Corn Rhizosphere	VFAGLINQAKSAASHLVLRYAARLSVAVPFVIAAGFALAAITVMLVDRFGHVID
Ga0134124_121984822	3300010397	Terrestrial Soil	VLKYVARVSVAVPFVIAAGFALAAITVMLVEHFGHVMAYWLVAGGLALVGVIA
Ga0134122_127281911	3300010400	Terrestrial Soil	VFAGLINQAKSAASHLILKYVARASVAVPFLIAAGFSLAAITVMVVERFGHVTAYWLVAG
Ga0134121_124954512	3300010401	Terrestrial Soil	VFAGLINRAKSAAGQLALKYVARASVAVPFIIAAGFALAAITVMLVELFGHVMAYWLVAGGLALIGVVAS
Ga0134123_121960881	3300010403	Terrestrial Soil	VFQGLINSAKTAASSLILKYVARASVAVPFVIALSFALAAIAAMLVDRFGHITGYWLMAGGLAAIGA
Ga0126317_107318723	3300011332	Soil	VFAGLINQAKSAASHLVLKYVERASVAVPFVIAAGFALAAITVMLVERFGHVMAYWCVAGGLALIGVIASIVVSIR
Ga0127502_109580781	3300011333	Soil	VFAGLINEAKAAASGLLLKYMARASVVVPFVIALGFALAAITIMLVERFGQVAAYWMM
Ga0137313_10443032	3300011403	Soil	VFAGLVNHAKAAASGLVLKYVARASVAVPFVIALGFALAAITVMLVQRFGHVTGYWLVAGG*
Ga0137457_10946282	3300011443	Soil	VFAGLVNHAKAAASGLVLKYVARASVAVPFVIALGFALAAITVMLVQRFGHVTGCSASAT
Ga0150985_1029484562	3300012212	Avena Fatua Rhizosphere	MFAGVINQAKGAVSHVILKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMGYWLVGGALALIGVIASLVVSA
Ga0150984_1020464662	3300012469	Avena Fatua Rhizosphere	VFTGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAAITVILVERFGHVMAYWLVAGGLASIGVIASIAA
Ga0164303_101518631	3300012957	Soil	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALRFALAAITVRLVDRFGHVMAYWLVAGGLALIGIVASIV
Ga0164302_105143941	3300012961	Soil	VFAGLINQAKSAASHLILKYVARASVAVPFVIAVGFALAAITVMLVGRFGHVMAYWL
Ga0126369_135846552	3300012971	Tropical Forest Soil	LFAGLIQHAREAASHLVLRYVARASVAVPFIVALGFAIAAIAVMLVERFGHVTAYWI
Ga0164308_114338142	3300012985	Soil	VFAGLINQAKSATSHLVLKYVARVSVAVPFVIAAGFALAAITVMLVERFGHVMAYWLVAGGLALVGVIA
Ga0163162_107281053	3300013306	Switchgrass Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAVGFALAAITVMLVERFGHIMAYWLVA
Ga0075320_10244501	3300014255	Natural And Restored Wetlands	MFAGLINQAKSAASDLVLKYVARASVAVPFVIALGFALAAVTVMLVERFGHVTAYWLLAGGLAAI
Ga0157379_114589872	3300014968	Switchgrass Rhizosphere	VFAGLINRAKSAAGQLVLKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWVVAGGLALIG
Ga0173483_106687691	3300015077	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAVGFALAAITVMLVERFGHIMAYWLVAGGLASIGVIAS
Ga0173483_107863842	3300015077	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMGYWLVAGGLALIGVIAS
Ga0132258_119995723	3300015371	Arabidopsis Rhizosphere	VFAGLINQAKSAASHLVLKYMARASVAVPFVIAAGFAIAAITVMLVERFGHVMAYWLVAGGLALIGVIASIVV*
Ga0132256_1023880871	3300015372	Arabidopsis Rhizosphere	VFAGLINQAKSAASHLILKYVARASVAVPFLIAAGFSLAAITVMLVERFGHVTAYWLVAGGLALI
Ga0132257_1004173963	3300015373	Arabidopsis Rhizosphere	LEDLTLGAATCFRVINSAKTAVSSLILKYVARASVAIPFVIALGFALAAIIDRFGHITG*
Ga0132257_1014411731	3300015373	Arabidopsis Rhizosphere	VFPGLINQAKSAASHLVLKYVARLSVAVPFVIAAGFALAAITVMLVDRFGHVMAYWLV
Ga0132255_1001871034	3300015374	Arabidopsis Rhizosphere	VFAGLINQAKSAVSRVVLQYAARASVAVPFVIALGFALAAIAVMLVERFGHVAGYWMMAGGLAAIGVLAWI
Ga0182032_100211591	3300016357	Soil	LFAGFIQHAREAASHLVLRYVARASVAVPFLIALGFAIAAIAVMLVGRFGHVAAY
Ga0184605_104962681	3300018027	Groundwater Sediment	VFAGLINQAKSAASHLVLKYVARASVAVPVVIALGFALAAIAVMLVERFGHVTGYWIMAGGLNA
Ga0184619_101894183	3300018061	Groundwater Sediment	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAAISVMLVERFGHVMAYWLVAGGLALVGVIASIIVSVKEHE
Ga0184618_103216873	3300018071	Groundwater Sediment	MFAGLINHAKAAASHLVVKYAARASVAVPFVIALGFALAAIAVMLVERFGHVTGYWIMAGGLAAIGIIAS
Ga0184624_104776102	3300018073	Groundwater Sediment	VFAGLINQAKSGASHVIIKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWLL
Ga0190268_111309541	3300018466	Soil	MFAGRIDQANSAASNLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVTGYWLVAGGLAAI
Ga0190268_116318011	3300018466	Soil	VFVGLINQAKSAASHLVLKYVARASVAVPFVIATGFALAAATVMLVERFGQVTAYWLVAGGLALIG
Ga0190268_119029771	3300018466	Soil	VFAGLINQAKSAAAHLVLRYVARASVAVPFVIAVGFALAAITVMLVERFGHVTAYWLLAGGLGLIG
Ga0190270_122163621	3300018469	Soil	MFAGLINQAKSAASHLVLKYVARGSVAVPFVIAAGFALAAITVMLVERFGHVKAYWLV
Ga0190270_130188082	3300018469	Soil	MFAGLINQAKSAASGLVLKYVARASVAVPFVIALGFALAAVTVMLVERFGHVTAYWLLAGGLAAIGIIAAMAVSVKE
Ga0190271_132934661	3300018481	Soil	MLAGLINSAKSAVSALLLQYVARASVAIPFVIAAGFALAACTMMLVERFGHITA
Ga0210407_112781462	3300020579	Soil	VFAGLINQAKSAASHLVRKYVARASVAVPFVIASGFALAAITVMLVERFGHVM
Ga0210387_113637451	3300021405	Soil	VFAGLINQAKSAASHLVRKYVARASVAVPFVIASGFALAAITVMLVERFGHVMAYWLVTG
Ga0222622_113454492	3300022756	Groundwater Sediment	VFAGLINQAKSAASHLVLRYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWLVAGSLALIG
Ga0207654_108765093	3300025911	Corn Rhizosphere	VFQGLINSAKTAASSLILKYVARASVAVPFVIALSFALAAIAAMLVDRFGHITGYWLMAGGLAA
Ga0207663_112675952	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFQGLINNAKSAVSGLVLKYVARASVAVPFFIALGFALAATTVMLVDRFGHITAYWVVAGGLALVGAMAAVIVFAREHEEE
Ga0207689_109852321	3300025942	Miscanthus Rhizosphere	VFAGLISQAKSAASGLVLKYVARASVAVPFVIALGFALAAVTVMLVERFGQVT
Ga0207712_100384246	3300025961	Switchgrass Rhizosphere	VFAGLISQAKSAASGLVLKYVARASVAVPFVIALGFALAAVTVMLVERFGHVTAYWLLAGGLAAIGIIAAMA
Ga0207712_115768492	3300025961	Switchgrass Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAVGFALAAITVMLVERFGHIMAYWLVAGGLALIGVIASIVVSVKEHE
Ga0207677_115808923	3300026023	Miscanthus Rhizosphere	VFAGLIHQAKSAVSGLVLKYVARASVAVPFVIALGFALAAITVMLVERFGHVMAYWLVA
Ga0207708_115026442	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWLVAGGLALIGVIASIVVSVKGNP
Ga0207641_123333631	3300026088	Switchgrass Rhizosphere	MFQGLINNAKSAVSGLVLKYVARASVAVPFIIALGFALAATTVMLVDRFGHVTAYWAVAGGLALVGAIAAIIVSAKEREE
Ga0209593_102274401	3300027743	Freshwater Sediment	VFQGLINSAKTAVSSLILKYVARASVAVPFVIALGFALAAIAAMLVDRFGHIAGYWLMAGGLAAIGAIAALF
Ga0209073_103258441	3300027765	Agricultural Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFAIAALTVMLVERFGHVMAYWLV
Ga0207428_101774311	3300027907	Populus Rhizosphere	VFAGLINKAKDTASRLVLRYVARASVAVPFVVALGFGLAAITVMLVQRFGHVTAY
Ga0207428_107132641	3300027907	Populus Rhizosphere	VFAGLIDQAKAAVARLLLEYVARASVAVPFVIALGFGLAAITLMLVQYFGYTAAYWMMA
Ga0209382_110541641	3300027909	Populus Rhizosphere	MFAGLINQAKSAVSRLVLQYVARASVAVPFIVAVGFALAAITVLLVNRFGHAAAYAMMAGGLAAIG
Ga0268265_101430361	3300028380	Switchgrass Rhizosphere	VFAGLISHVKSAAGQLVFKYVARASVAVPFVIAAGFGLAAITVMLVELFGHVMAYWLVAGGLALIGVLAS
Ga0268264_118996162	3300028381	Switchgrass Rhizosphere	MFQGLINNAKSAVSGLVLKYVARASVAVPFIIALGFALAAITVMLVDRFGHVIAYWAVAG
Ga0308206_10305121	3300030903	Soil	VFAGLVNQAKSAASHVILKYVARASVAVPFVIAAGFALAAITVMLVERFGHVMAYWLAEA
Ga0308206_11987991	3300030903	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAAVTVMLVERFGHVIAYWLVAAGLALIGITASIVVS
Ga0308189_100499462	3300031058	Soil	MFAGLINHAKAAASHHVVKYAARASVAVPFVIALGFALAAIAVMLVERFGHVTGYWIMAGGLAAIGIIASIVVSV
Ga0308189_101054233	3300031058	Soil	VFAGLINQAKSAASRLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHLMAYWLM
Ga0308189_102709481	3300031058	Soil	VFAGLVNQAKSAASHVVLKYVARASVAVPFIIAAGFGLAALTVTLVERFGQSMAYGLVAGGLAFV
Ga0308189_105072541	3300031058	Soil	VFAGLINQAKSAASHLVLKFVARASVAVPFVIATGFALAAITGMLVERFGHVMAYWLVAGGLAVIGVIASVAVSVKEH
Ga0308204_101637691	3300031092	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERYGHVMAYWMV
Ga0308204_102616241	3300031092	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERLGHVMAYWLVAGGLALIGVIASIVVSVKEH
Ga0308197_100757881	3300031093	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGDVMAYWMVAGGLALIGVIASIVVS
Ga0308188_10254012	3300031097	Soil	VFAGLINQAKSAASHLVLKYVARASVAVPFVIAAGFALAALTVMLVERFGHVMAYWMVA
Ga0307499_101221201	3300031184	Soil	MFQGLINNAKSAVSGLVLKYVARASVAVPFFIALGFALAAITVMLVNRFGQITAYWTIAGGLA
Ga0307499_101550551	3300031184	Soil	VEVLTAPEKPVFAGLINQATSAVSRVVLQYAARASVAVPFVIALGFALAAIAVMLVEHFGHVAGYWMMAGGLASIGVI
Ga0307500_100888223	3300031198	Soil	VFAGLINQATSAVSRVVLQYAARASVAVPFVIALGFALAAIAVMLVERFGQVAGYWMMAGGLAAIGVTAWIVVSV
Ga0318516_104832781	3300031543	Soil	LFAGFIQHAREAASHLVLRYVARASVAVPFLIALGFAIAAIAVMLVGRFGHVAAYWIM
Ga0318541_100706063	3300031545	Soil	LFAGFIQHAREAASHLVLRYVARASVAVPFLIALGFAIAAIAVMLVGRFGHVAAYWIMAG
Ga0307468_1019652711	3300031740	Hardwood Forest Soil	VFQGLINSAKSAVSSVILKYVARASVAVPFVIALGFALAAIAAMLVDLFGHIAGYWLVAGGLAA
Ga0310917_108018041	3300031833	Soil	VFQRLLRDAKSAASSLVLKYVARASVAVPFIIALGFALAAVTVMLVQRFGHATAYWIMAGGLAVIGIL
Ga0310907_106719131	3300031847	Soil	MFQGLINNAKSAVSGLVLKYVARASVAVPFIIALGFALAATTVMLVDRFGHVTAYWAVAGGLALVGAIAA
Ga0310907_108916861	3300031847	Soil	VFAGLINQAKSAVSRVVLQYAARASVAVPFVIALGFALAAIAVMLVERFGHVAGYWMMAGGLAA
Ga0310910_108657251	3300031946	Soil	VFQRLLRDAKSAASSLVLKYVARASVAVPFIIALGFALAAVTVMLVQRFGHATAYWIMAGGLAVIGILA
Ga0307411_107577021	3300032005	Rhizosphere	VFAGLVNEAKAAASGLLMKYAARASVAVPFAVALGFALAATTVMLVQWLGQVTAYWLMAAGLA
Ga0318562_104584941	3300032008	Soil	VFQRLLRDAKSAASSLVLKYVARASVAVPFIIALGFALAAVTVMLVQRFGHATAYWIMAGGLAVIGILATATIAVKEHE
Ga0310906_103256043	3300032013	Soil	MFAGLINQAKSAVSRLVLQYVARASVAVPFIVAVGFALAAITVLLVNRFGHAAAY
Ga0318556_104391862	3300032043	Soil	LFAGFIQHAREAASHLVLRYVARASVAVPFLIALGFAIAAIAVMLVGRFGHVAAYWIMAGGLAI
Ga0318533_102895071	3300032059	Soil	LFAGFIQHAREAASHLVLRYVARASVAVPFLIALGFAIAAIAVMLVGRFGHVAA
Ga0247829_103979181	3300033550	Soil	MPKAAASGLVLKYVARASVAVPFVIALGFALAAITVMLVQRFGHVTGYWLVAGG
Ga0373950_0021008_975_1151	3300034818	Rhizosphere Soil	VFQGLINSAKTAVSSLILKYVARASVAVPFVISLSFALAAIAAMLVDRFGYIAGYWLMA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073291

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences