Metagenome Family F073224

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073224
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	51 residues
Representative Sequence	PDSAFAWLERASWRWPHRAVLSDPALDPLRSDPRFARLSERVAREMGLR
Number of Associated Samples	95
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.77% β-sheet: 0.00% Coil/Unstructured: 66.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13432	TPR_16	3.33
PF06983	3-dmu-9_3-mt	2.50
PF00069	Pkinase	2.50
PF00753	Lactamase_B	2.50
PF02687	FtsX	2.50
PF13683	rve_3	1.67
PF05685	Uma2	1.67
PF11695	DUF3291	1.67
PF07638	Sigma70_ECF	1.67
PF07676	PD40	1.67
PF04389	Peptidase_M28	1.67
PF05163	DinB	1.67
PF13360	PQQ_2	1.67
PF03551	PadR	1.67
PF03992	ABM	0.83
PF11954	DUF3471	0.83
PF03372	Exo_endo_phos	0.83
PF04616	Glyco_hydro_43	0.83
PF00248	Aldo_ket_red	0.83
PF00296	Bac_luciferase	0.83
PF04909	Amidohydro_2	0.83
PF13673	Acetyltransf_10	0.83
PF01965	DJ-1_PfpI	0.83
PF00246	Peptidase_M14	0.83
PF13370	Fer4_13	0.83
PF12697	Abhydrolase_6	0.83
PF03851	UvdE	0.83
PF00884	Sulfatase	0.83
PF03466	LysR_substrate	0.83
PF13540	RCC1_2	0.83
PF01341	Glyco_hydro_6	0.83
PF00266	Aminotran_5	0.83
PF02311	AraC_binding	0.83
PF13305	TetR_C_33	0.83
PF03060	NMO	0.83
PF11138	DUF2911	0.83
PF01464	SLT	0.83
PF00578	AhpC-TSA	0.83
PF02922	CBM_48	0.83
PF01035	DNA_binding_1	0.83
PF00127	Copper-bind	0.83
PF02423	OCD_Mu_crystall	0.83
PF00775	Dioxygenase_C	0.83
PF06094	GGACT	0.83
PF00196	GerE	0.83
PF00501	AMP-binding	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	10.00
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	2.50
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	2.50
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.67
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.67
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.67
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.67
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.67
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.83
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.83
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.83
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.83
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.83
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.83
COG5297	Cellulase/cellobiase CelA1	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	40.83 %
Unclassified	root	N/A	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.67 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	39.17 %
Unclassified	root	N/A	12.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	12.50 %
Unclassified	root	N/A	12.50 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	12.50 %
Unclassified	root	N/A	12.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	0.83 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	6.67 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.33 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.83 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.83 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	6.67 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.33 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.83 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.83 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1121187	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102018445	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300000890\|JGI11643J12802_10257023	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300000890\|JGI11643J12802_11264800	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300004156\|Ga0062589_101385072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	685	Open in IMG/M
3300004157\|Ga0062590_101554550	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	667	Open in IMG/M
3300004643\|Ga0062591_101539543	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005290\|Ga0065712_10199133	Not Available	1115	Open in IMG/M
3300005331\|Ga0070670_101941828	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005344\|Ga0070661_101251040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	622	Open in IMG/M
3300005353\|Ga0070669_101432733	Not Available	600	Open in IMG/M
3300005364\|Ga0070673_100411505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300005456\|Ga0070678_101120914	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005535\|Ga0070684_102004490	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005615\|Ga0070702_100560597	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005616\|Ga0068852_101955092	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005617\|Ga0068859_100033794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5134	Open in IMG/M
3300005618\|Ga0068864_101437015	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005719\|Ga0068861_101984527	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005834\|Ga0068851_10368099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	839	Open in IMG/M
3300005844\|Ga0068862_100004538	All Organisms → cellular organisms → Bacteria	11703	Open in IMG/M
3300006058\|Ga0075432_10148189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	900	Open in IMG/M
3300006844\|Ga0075428_100119593	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300006845\|Ga0075421_100359712	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300006845\|Ga0075421_101851259	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006845\|Ga0075421_101869452	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006845\|Ga0075421_102535487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	533	Open in IMG/M
3300006846\|Ga0075430_100023368	All Organisms → cellular organisms → Bacteria	5261	Open in IMG/M
3300006847\|Ga0075431_100296431	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300006847\|Ga0075431_100383443	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300006852\|Ga0075433_10126027	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300006853\|Ga0075420_101454660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	588	Open in IMG/M
3300006853\|Ga0075420_101695074	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006880\|Ga0075429_100073481	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300006880\|Ga0075429_100621206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	947	Open in IMG/M
3300006880\|Ga0075429_101053260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	711	Open in IMG/M
3300006880\|Ga0075429_101563401	Not Available	573	Open in IMG/M
3300006894\|Ga0079215_10773583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300006918\|Ga0079216_10404128	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300006969\|Ga0075419_10078689	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300006969\|Ga0075419_10220897	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300007004\|Ga0079218_10267401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300007004\|Ga0079218_11697290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	700	Open in IMG/M
3300007076\|Ga0075435_101485708	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009147\|Ga0114129_10145400	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300009153\|Ga0105094_10895699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	524	Open in IMG/M
3300009156\|Ga0111538_12504748	All Organisms → cellular organisms → Bacteria → FCB group	647	Open in IMG/M
3300009177\|Ga0105248_10420208	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300009789\|Ga0126307_11467176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300009840\|Ga0126313_10636646	Not Available	861	Open in IMG/M
3300010036\|Ga0126305_10716948	Not Available	677	Open in IMG/M
3300010040\|Ga0126308_10458003	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300010040\|Ga0126308_11040621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300010044\|Ga0126310_11090773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300010399\|Ga0134127_13557948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300012893\|Ga0157284_10241002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	565	Open in IMG/M
3300012940\|Ga0164243_10864835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M
3300012960\|Ga0164301_10459427	Not Available	908	Open in IMG/M
3300012971\|Ga0126369_11218538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	842	Open in IMG/M
3300013100\|Ga0157373_11130398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	588	Open in IMG/M
3300014326\|Ga0157380_10437374	Not Available	1252	Open in IMG/M
3300014745\|Ga0157377_10165332	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300014968\|Ga0157379_10723422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	935	Open in IMG/M
3300015372\|Ga0132256_102967486	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300015374\|Ga0132255_102103953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	860	Open in IMG/M
3300015374\|Ga0132255_102812942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	744	Open in IMG/M
3300018081\|Ga0184625_10505881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018469\|Ga0190270_12727714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300018476\|Ga0190274_11097514	Not Available	875	Open in IMG/M
3300025910\|Ga0207684_11115227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	656	Open in IMG/M
3300025917\|Ga0207660_11546024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	535	Open in IMG/M
3300025920\|Ga0207649_11155610	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025925\|Ga0207650_10842000	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	778	Open in IMG/M
3300025926\|Ga0207659_11319437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	619	Open in IMG/M
3300025941\|Ga0207711_11672064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	580	Open in IMG/M
3300025945\|Ga0207679_11670120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300025981\|Ga0207640_10694753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	871	Open in IMG/M
3300025986\|Ga0207658_10375174	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300027650\|Ga0256866_1153512	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300027873\|Ga0209814_10439693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300027880\|Ga0209481_10236721	Not Available	918	Open in IMG/M
3300027880\|Ga0209481_10311946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	799	Open in IMG/M
3300027886\|Ga0209486_10084749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1654	Open in IMG/M
3300027886\|Ga0209486_10493181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300027886\|Ga0209486_11180946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300027909\|Ga0209382_11481735	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300028379\|Ga0268266_10645272	All Organisms → cellular organisms → Bacteria → FCB group	1019	Open in IMG/M
3300028380\|Ga0268265_10009832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6456	Open in IMG/M
3300028380\|Ga0268265_10695770	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300028596\|Ga0247821_11264124	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	503	Open in IMG/M
3300028784\|Ga0307282_10199844	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300028809\|Ga0247824_10539356	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	693	Open in IMG/M
3300028889\|Ga0247827_11072308	Not Available	552	Open in IMG/M
3300030336\|Ga0247826_11239685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300030496\|Ga0268240_10103598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	668	Open in IMG/M
3300030620\|Ga0302046_10296282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1330	Open in IMG/M
3300031547\|Ga0310887_10524006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	717	Open in IMG/M
3300031548\|Ga0307408_101103465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	736	Open in IMG/M
3300031731\|Ga0307405_10967674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	724	Open in IMG/M
3300031824\|Ga0307413_10324898	Not Available	1177	Open in IMG/M
3300031824\|Ga0307413_10562740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	927	Open in IMG/M
3300031852\|Ga0307410_10394250	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300031852\|Ga0307410_11100898	Not Available	689	Open in IMG/M
3300031901\|Ga0307406_10908951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	750	Open in IMG/M
3300031901\|Ga0307406_11470581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300031913\|Ga0310891_10038095	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300031995\|Ga0307409_100341250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1409	Open in IMG/M
3300031995\|Ga0307409_100781454	Not Available	961	Open in IMG/M
3300032002\|Ga0307416_100338059	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300032002\|Ga0307416_100938301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	967	Open in IMG/M
3300032004\|Ga0307414_10396590	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300032004\|Ga0307414_11707645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	587	Open in IMG/M
3300032004\|Ga0307414_12232766	Not Available	511	Open in IMG/M
3300032005\|Ga0307411_10843770	Not Available	810	Open in IMG/M
3300032017\|Ga0310899_10473654	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300032075\|Ga0310890_11316994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	591	Open in IMG/M
3300032126\|Ga0307415_100257322	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300032126\|Ga0307415_100615893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	968	Open in IMG/M
3300032144\|Ga0315910_10479961	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300033551\|Ga0247830_11643233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.83%
Environmental	Environmental	39.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.83%
Terrestrial	Environmental → Terrestrial	37.50%
Aquatic	Environmental → Aquatic	1.67%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	50.00%
Soil	Environmental → Terrestrial → Soil	37.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	40.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.50%
Loam	Environmental → Terrestrial → Soil → Loam	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	40.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012940	Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_11211872	2228664021	Soil	AFAWLERASWLWPHRAVLSDPALDPLRSDPRFARLSERVAREMGLR
INPhiseqgaiiFebDRAFT_1020184451	3300000364	Soil	FERTSWQWPHRAALDDPALDPLRADPRFPQLAARIQRDMGMR*
JGI11643J12802_102570233	3300000890	Soil	PDSAFAWLERASWRWPHRAVLSDPALDPLRADPRFARLSERVAREMGLR*
JGI11643J12802_112648001	3300000890	Soil	PDSAFAWLERASWRWPHRAVLSDPALDPLRSDPRFARLSERVAREMGLR*
Ga0062589_1013850722	3300004156	Soil	TWTWPHRAVRSDPALDRLRSDPRFAQLSARIEREMGMEPRLAVQ*
Ga0062590_1015545501	3300004157	Soil	RSSWLWPHRAALVDPALDPIRTDPRFSRLSDRIAREMGLR*
Ga0062591_1015395432	3300004643	Soil	EPFNIGRAYVALQEPDSAFAWLERSSWQWPSRAVRMDPALDPIRSDPRFARLSERIEREMGLR*
Ga0065712_101991332	3300005290	Miscanthus Rhizosphere	FAWLEPRTWTWPHRAVRSDPALDRLRSDPRFAQLSARIEREMGMEPRLAVQ*
Ga0070670_1019418281	3300005331	Switchgrass Rhizosphere	HIALGEPDSAFAWLDRADWRWPHRGNRYDPTLDPVRADPRFARLSQRIDREMGLR*
Ga0070661_1012510401	3300005344	Corn Rhizosphere	SSWKWPHRAVRADPALDPLRSDPRFIRLSERIEREMGLR*
Ga0070669_1014327331	3300005353	Switchgrass Rhizosphere	ERANWRWPHRGVRADPALDPLRSDPRFVRLSARVASEMGMAK*
Ga0070673_1004115052	3300005364	Switchgrass Rhizosphere	LERSSWQWPHRAVRADPALDPLRADPRFAQLSAKVAKAMGIQ*
Ga0070678_1011209141	3300005456	Miscanthus Rhizosphere	AWLERSSWQWPHRAVRIDPALDPLRSDPRFARLTERIDREMGMR*
Ga0070684_1020044902	3300005535	Corn Rhizosphere	LERSSWQWPHRAVRSDPALDPLRADPRFARLSARVDREMGMR*
Ga0070702_1005605971	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AWFERTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR*
Ga0068852_1019550921	3300005616	Corn Rhizosphere	VWLERSNWQFPHRAVRSDPGLDPLRSDARFARLADRIDREMGVR*
Ga0068859_1000337941	3300005617	Switchgrass Rhizosphere	IARAHMALGDLDSAFVWFDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR*
Ga0068864_1014370152	3300005618	Switchgrass Rhizosphere	ALGDLDSAFVWFDRADWRWPHRGNRYDPTLDPVRADPRFIRLSERVDREMGLR*
Ga0068861_1019845271	3300005719	Switchgrass Rhizosphere	ALQEPDSAFAWLERSSWQWPHRAVRMDPALDPIRSDPRFARLSERIEREMGLR*
Ga0068851_103680991	3300005834	Corn Rhizosphere	PFSIARAYVAPAEPDSAFAWLEPRTWTWPHRAVRSDPALDRVRSDPRFAQLSARIEREMGMEPRLAVQ*
Ga0068862_10000453816	3300005844	Switchgrass Rhizosphere	RAYVALGEPDSAFAWLERATWNFPHRADRRDPALDGGSDARFARLVSRIDREMGLRGTH*
Ga0075432_101481891	3300006058	Populus Rhizosphere	ARMALGDLDSAFVWFDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR*
Ga0075428_1001195933	3300006844	Populus Rhizosphere	DSAFTWFERASWKWPHRAVLDDPALDPVRADPRFAQLSERIARDMGMR*
Ga0075421_1003597121	3300006845	Populus Rhizosphere	LQEPDSAFAWLDKSSWLWPHRAALIDPALDPIRSDPRFAKLSDRIGREMGLR*
Ga0075421_1018512591	3300006845	Populus Rhizosphere	VALGEPDSAFAWFDRADWRWPHRGNRYDPALDLVRADPRFARLSERIDREMGVR*
Ga0075421_1018694522	3300006845	Populus Rhizosphere	FNIGRAYVALQEPDSAFAWLERSSWQWPHRAVRMDPALDPIRSDPRFARLSERIEREMGLR*
Ga0075421_1025354872	3300006845	Populus Rhizosphere	SAFAWLERSRWQWPHRAVLSDPALDPLRSDPRFARLVERVEREMGIR*
Ga0075430_1000233681	3300006846	Populus Rhizosphere	AWFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGMR*
Ga0075431_1002964311	3300006847	Populus Rhizosphere	PDSAFAWFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGLR*
Ga0075431_1003834432	3300006847	Populus Rhizosphere	PDSAFAWFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGMR*
Ga0075433_101260272	3300006852	Populus Rhizosphere	LNEPDSAFAWFERTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR*
Ga0075420_1014546602	3300006853	Populus Rhizosphere	FSIGRAYVALGEPDSAFAWFDRADWRWPHRGNRYDPALDPVRADPRFTRLSERVAREMGLR*
Ga0075420_1016950742	3300006853	Populus Rhizosphere	EPFNIGRAYVALRQPDSAFVWLERSNWRFPHRAVRADPGLDPLRTDIRFTRLADRIDREMGIR*
Ga0075429_1000734811	3300006880	Populus Rhizosphere	AWFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGLR*
Ga0075429_1006212063	3300006880	Populus Rhizosphere	LGEPDSAFAWFERASWQWPHRAVLDDPALDPVRADPRFAQLSERIARDMGMR*
Ga0075429_1010532602	3300006880	Populus Rhizosphere	FSIGRAHIALGEPDSAFAWLDRADWRFPQRGNRFDPTLDPLRADPRFARLSQRIDREMGVR*
Ga0075429_1015634011	3300006880	Populus Rhizosphere	FDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGMR*
Ga0079215_107735832	3300006894	Agricultural Soil	DSAFAWLERSSWQWPHRAARADPALDPLRADPRFARLTERVDREMGLR*
Ga0079216_104041281	3300006918	Agricultural Soil	PDSAFAWLERSPWQWPHRAARGDPALDPLRSDARFTQLSKRIDRDMGIN*
Ga0075419_100786892	3300006969	Populus Rhizosphere	WFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGMR*
Ga0075419_102208972	3300006969	Populus Rhizosphere	WFDRADWRWPHRGNRYDPALDPVRADPRFARLSDRIDREMGLR*
Ga0079218_102674011	3300007004	Agricultural Soil	RSRWQWPHRAVLSDPALDPLRADPRFARLTSRVAREMGIR*
Ga0079218_116972901	3300007004	Agricultural Soil	RAFVALRQDDSAFVWLERSNWRWPHRAVRWDPALDRVRSDPRFARLSSRIDSVTGMR*
Ga0075435_1014857081	3300007076	Populus Rhizosphere	SAFAWLERSNWKFPHRAVRSDPALDPLRSDPRFSRLAARVEREMGLQR*
Ga0114129_101454001	3300009147	Populus Rhizosphere	NWQWPHRAILSDPTLDPLRADPRFARLTARVARDMGIQ*
Ga0105094_108956991	3300009153	Freshwater Sediment	NIARAHVALGEVDSAFAWFERSNWRWPHRAALADPALDPIRSDPRYAPMVERIEREMGIR
Ga0111538_125047481	3300009156	Populus Rhizosphere	WPHRAALIDPALDPIRSDPRFAQLSDRVEREMGLR*
Ga0105248_104202081	3300009177	Switchgrass Rhizosphere	SAFVWLERSNWKFPHRAVRSDPGLDPLRSDARFARLADRIDREMGVR*
Ga0126307_114671762	3300009789	Serpentine Soil	LNETDSAFAWLDRSSWRWPHRAVRADPALDPIRSDPRFAQLSARVEREMGIR*
Ga0126313_106366461	3300009840	Serpentine Soil	SWKWPHRALRADPALDPIRSDPRFVRLSARIEREMGIKYSPSERR*
Ga0126305_107169482	3300010036	Serpentine Soil	PDSAFAWLDRSSWTWPHRALRADPALDPLRSDPRFARLSARIEREMGIK*
Ga0126308_104580032	3300010040	Serpentine Soil	WEGFSIARAYVAMSMPDSAFAWLERSSWVWPHRAVRADPALDPLRSDPRFARLSAQVAKEMGMQ*
Ga0126308_110406211	3300010040	Serpentine Soil	SIGRAHIALGEPDSAFAWLDRADWRWPHRGNRYDPTLDPVRADPRFARLSQRIDREMGLR
Ga0126310_110907731	3300010044	Serpentine Soil	DSAFAWLDRSSWTWPHRAARADPTLDPIRSDPRFIRLSARIDQEMGIR*
Ga0134127_135579481	3300010399	Terrestrial Soil	RAYVALQEPDSAFVWLDRSSWLWPHRAAVIDPALDPLRSDPRFARLSDRIEREMGLR*
Ga0157284_102410022	3300012893	Soil	ATLELAKASPREPFNIGRAYVALQEPDSAFAWLERSSWQWPSRAVRMDPALDPIRSDPRFARLSERIEREMGLR*
Ga0164243_108648352	3300012940	Compost	RAYVALGEPDSAFAWLDRANWKWPHRAVLSDPALDPIRADPRFARLSERVEHEMGLR*
Ga0164301_104594271	3300012960	Soil	FPHRAARSDPALDPLRSDLRFSRLAARIEREMGMER*
Ga0126369_112185381	3300012971	Tropical Forest Soil	ERSSWLWPHRAVLSDPALDRLRSDPRFARLAARVEREMGMRPKLALE*
Ga0157373_111303981	3300013100	Corn Rhizosphere	AEPDSAFAWLEPRTWTWPHRAVRSDPALDRLRSDPRFAQLSARIEREMGMEPRLAVQ*
Ga0157380_104373743	3300014326	Switchgrass Rhizosphere	RTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR*
Ga0157377_101653321	3300014745	Miscanthus Rhizosphere	GVWLERSNWKLPHRAVRSDPGLDPLRCDARFARLADRIDREMGVR*
Ga0157379_107234221	3300014968	Switchgrass Rhizosphere	DAATQPREPFTIARAWIALQERDSAFAWLDRSSWLWPHRAALVDPALDPIRSDPRFARLSDRIEREMGLR*
Ga0132256_1029674861	3300015372	Arabidopsis Rhizosphere	LRQSDSAFVWLERSNWKFPHRAVRSDPGLDPLRSDARFARLADRIDREMGVR*
Ga0132255_1021039531	3300015374	Arabidopsis Rhizosphere	RAYAGLNEPDSAFAWFERTSWEWPHRAVLDDPALDPLRADPRFAQLASRIQRNMGMR*
Ga0132255_1028129421	3300015374	Arabidopsis Rhizosphere	YVALQEPDSAFAWLERSSWQWPHRAVRMDPALDPIRSDPRFARLSERIEREMGLRIGAEPTSPAPSR*
Ga0184625_105058811	3300018081	Groundwater Sediment	QWTHRADRRDPGLDAVRSDPRFARLSARIDRDMGVRQ
Ga0190270_127277141	3300018469	Soil	SAFAWLDRANWRFGHRAARSDPALDPLRSDPRFAELVLRVDRELGMR
Ga0190274_110975141	3300018476	Soil	RLAKVQPREPFTVARGHVALQEPDSAFVWLDRSSWKWPHRAVLADPALDPVRADPRFVQLSARVEREMGLR
Ga0207684_111152271	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGLNEPDSAFAWFERTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR
Ga0207660_115460241	3300025917	Corn Rhizosphere	ESLRRAELQPREPFNIARAYVALGEPDSAFAWLERANWKWPHRAVLSDPALDPIRADPRFVQLSERVAREMGLR
Ga0207649_111556101	3300025920	Corn Rhizosphere	LGEPDSAFAWLDRSSWKWPHRALRADPALDPLRSDPRFTRLSERIDHEMGLR
Ga0207650_108420001	3300025925	Switchgrass Rhizosphere	QWLASRSYVAPAEPDSAFAWLEPRTWTWPHRAVRSDPALDRLRSDPRFAQLSARIEREMGMEPRLAVQ
Ga0207659_113194371	3300025926	Miscanthus Rhizosphere	SWLWPHRAALVDPALDPIRSDPRFARLSDRIEREMGLR
Ga0207711_116720642	3300025941	Switchgrass Rhizosphere	FVWFDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR
Ga0207679_116701201	3300025945	Corn Rhizosphere	AFSIGRARMALGDLDSAFVWFDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR
Ga0207640_106947531	3300025981	Corn Rhizosphere	FVWLERSNWKFPHRAVRSDPGLDPLRSDARFARLADRIDREMGVR
Ga0207658_103751741	3300025986	Switchgrass Rhizosphere	AFAWFERTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR
Ga0256866_11535122	3300027650	Soil	AALGEKDSAFAWFERSSWRWPHRAVRADPALDRLRADPRFDLLVQRVDREMGLR
Ga0209814_104396932	3300027873	Populus Rhizosphere	DSAFAWFDRADWRWPHRGNRYDPALDPVRADPRFARLSQRIDREMGMR
Ga0209481_102367212	3300027880	Populus Rhizosphere	RSNWKFPHRAVRAEPALDSLRSDARFVRLVERIDREMGLR
Ga0209481_103119461	3300027880	Populus Rhizosphere	AFAWLERSRWQWPHRAVLSDPALDPLRSDPRFARLVERVEREMGIR
Ga0209486_100847491	3300027886	Agricultural Soil	IARAYVALQQPDSAFALLERSNWHWTHRADRRDPALDPVRSDPRFARLSARIDQQMGVRQ
Ga0209486_104931812	3300027886	Agricultural Soil	VALGEPDSAFAWFDRADWRWPHRGNRYDPALDPVRADPRFARLSQRIDREMGVR
Ga0209486_111809462	3300027886	Agricultural Soil	LGEPDSAFAWLDRSSWKWPHRAVRADPALDPLRSDPRFAELSVRIEREMGIR
Ga0209382_114817351	3300027909	Populus Rhizosphere	HVALGEPDSAFAWFDRAEWRWPHRGNRFDPALDPVRADPRFARLSERIDREMGLR
Ga0268266_106452722	3300028379	Switchgrass Rhizosphere	FEPFNIGRAYVALGEPDSAFAWLERSSWQWPDRAARIDPGLVPLHGDPRFARLSARVNRDMGMR
Ga0268265_100098321	3300028380	Switchgrass Rhizosphere	YVALQEPDSAFVWLDRSSWLWPHRAAVIDPALDPLRSDPRFARLSDRIEREMGLR
Ga0268265_106957701	3300028380	Switchgrass Rhizosphere	NIGRAHVGLNEPDSAFAWFERTSWEWPHRASLDDPALDPVRADPRFPQLAARIQRDMGMR
Ga0247821_112641241	3300028596	Soil	YAWFDRADWRWPHRGNRYDPALDPVRSDPRFARLSARVDREMGLR
Ga0307282_101998441	3300028784	Soil	SAFAWLERSTWQFPHRAVLSDPALDPIRGDPRFARLRARIARDMGIR
Ga0247824_105393561	3300028809	Soil	EPDSAFAWLERSSWQWPHRANRGDLGLDPLRSDPRFARLVVRIEREMGMQ
Ga0247827_110723082	3300028889	Soil	AVGDLDSAFAWLDRADWRWPHRGNRYDPALASVRADPRFVRLSERVDREMGMR
Ga0247826_112396851	3300030336	Soil	IGRARMALGDLDSAFAWLDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR
Ga0268240_101035981	3300030496	Soil	WLDRADWRWPHRGNRFDPALDPLRADPRFARLSERVDREMGIR
Ga0302046_102962821	3300030620	Soil	ALRQPDSAFTWLERGSWQWPHRAVLSDPGLDPLRTDARFARLSARVEGEMGIR
Ga0310887_105240061	3300031547	Soil	ALGDLDSAFVWFDRADWRWPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR
Ga0307408_1011034652	3300031548	Rhizosphere	NIARAHVALQEPDSAFAWLDRSGWLWPHRAALIDPALDPIRSDPRFGLLSSRIRREMGLR
Ga0307405_109676742	3300031731	Rhizosphere	FGNNRAPFEPFNVARAYVALREPDSAFAWLDRSNWLWPHRAALIDPALDPIPSDPRFARLSDRIQREMGLR
Ga0307413_103248981	3300031824	Rhizosphere	SNWLWPHRAALIDPALDPIPSDPRFARLSDRIQREMGLR
Ga0307413_105627401	3300031824	Rhizosphere	NIGRAYVALGEPDSAFAWLDRARWQWPHRAMLDDPALDPLRADPRFPRLRARITREMGLR
Ga0307410_103942502	3300031852	Rhizosphere	DWTWPLYALRADPSLDPIRGDPRFAALSERVEREMGLR
Ga0307410_111008982	3300031852	Rhizosphere	WPHRGNRYDPTLDPVRADPRFVRLSERVDREMGLR
Ga0307406_109089511	3300031901	Rhizosphere	PDSAFAWLERSNWNWSHRADRRDPALDAVRSDPRFARLSARIDKQMGLRQ
Ga0307406_114705812	3300031901	Rhizosphere	AYVALRQPDSAFKWLERSNWQWTHRADRRDPALDPVRADPRFARLSARVDREMGVRQ
Ga0310891_100380951	3300031913	Soil	SSWLWPHRAAVIDPALDPLRSDPRFARLSDRIEREMGLR
Ga0307409_1003412501	3300031995	Rhizosphere	DSAFAWLERSAWQWPHRAVRGDPALDPLRADPRFSRISERVDREMGVR
Ga0307409_1007814541	3300031995	Rhizosphere	ADWRWPHRGNRFDPALDPVRADPRFARLSQRIDREMGVR
Ga0307416_1003380593	3300032002	Rhizosphere	VALGEADSAFAWFERADWRWPHRGNRYDPALDPVRADLRFARLSERIDREMGMR
Ga0307416_1009383012	3300032002	Rhizosphere	PDSAFAWLDRADWRWPHRGNRYDPTLDPVRADPRFARLSQRIDQEMGLR
Ga0307414_103965901	3300032004	Rhizosphere	DSAFAWLERSAWQWPHRAVRGDPALDPLRADPRFTRISERVDREMGVQ
Ga0307414_117076451	3300032004	Rhizosphere	VALGEADSAFAWFERADWRWPHRGNRYDPTLDPVRADLRFARLSERIDR
Ga0307414_122327661	3300032004	Rhizosphere	PDSAFAWLERSSWKWPHRAIRADPALDPLRSDPRFARLSLRVEREMGIR
Ga0307411_108437701	3300032005	Rhizosphere	WPHRGNRFDPALDPVRADPRFARLSQRIDREMGVR
Ga0310899_104736541	3300032017	Soil	SSWLWPHRAALVDPALDPIRSDPRFTRLSERIDREMGLR
Ga0310890_113169941	3300032075	Soil	RAYVALQEPDSAFAWLERSSWQWPHRAVRMDPALDPIRSDPRFARLSERIEREMGLR
Ga0307415_1002573221	3300032126	Rhizosphere	WLERSSWKWPHRAMRADPALDPLRSDPRFARLSARVEREMGIR
Ga0307415_1006158932	3300032126	Rhizosphere	RSAWQWPHRAVRGDPALDPLRADPRFSRISERVDREMGVR
Ga0315910_104799611	3300032144	Soil	AQPKEPFTIARALVALHELDSAFVWLDRSSWLWPHRAALVDPALDPIRSDPRFAQLQVRINREMGLR
Ga0247830_116432332	3300033551	Soil	GRAHIALGEPDSAFAWFDRADWRWPHRGNRYDPTLDPVRADPRFARLSQRIDREMGLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences