Metagenome Family F073072

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073072
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	55 residues
Representative Sequence	MKKIVFIAAYLVEDPEAYEGKTNTDVEKEILEEISPIPYVARIEKVTVLDCPT
Number of Associated Samples	57
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	74.79 %
% of genes near scaffold ends (potentially truncated)	14.17 %
% of genes from short scaffolds (< 2000 bps)	53.33 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (70.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (50.833 % of family members)
Environment Ontology (ENVO)	Unclassified (53.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 0.00% Coil/Unstructured: 81.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
d.96.1.0: Tetrahydrobiopterin biosynthesis enzymes-like	d2dj6a_	2dj6	0.67
d.96.1.2: Tetrahydrobiopterin biosynthesis enzymes-like	d2g64a1	2g64	0.67
d.96.1.0: Tetrahydrobiopterin biosynthesis enzymes-like	d2dj6a_	2dj6	0.67
d.96.1.2: Tetrahydrobiopterin biosynthesis enzymes-like	d2g64a1	2g64	0.67
d.96.1.2: Tetrahydrobiopterin biosynthesis enzymes-like	d3lx3a_	3lx3	0.66
d.96.1.2: Tetrahydrobiopterin biosynthesis enzymes-like	d3lx3a_	3lx3	0.66
d.58.41.1: SEA domain	d1ivza1	1ivz	0.59
d.58.41.1: SEA domain	d1ivza1	1ivz	0.59
d.43.2.1: Band 7/SPFH domain	d1wina1	1win	0.58
d.43.2.1: Band 7/SPFH domain	d1wina1	1win	0.58

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01555	N6_N4_Mtase	10.83
PF14520	HHH_5	1.67
PF13650	Asp_protease_2	1.67
PF09979	DUF2213	1.67
PF00589	Phage_integrase	1.67
PF13620	CarboxypepD_reg	1.67
PF00535	Glycos_transf_2	1.67
PF00156	Pribosyltran	1.67
PF13020	NOV_C	1.67
PF13412	HTH_24	1.67
PF00583	Acetyltransf_1	1.67
PF03463	eRF1_1	1.67
PF12804	NTP_transf_3	0.83
PF01935	DUF87	0.83
PF02803	Thiolase_C	0.83
PF01061	ABC2_membrane	0.83
PF04015	DUF362	0.83
PF01022	HTH_5	0.83
PF13649	Methyltransf_25	0.83
PF01916	DS	0.83
PF01862	PvlArgDC	0.83
PF02687	FtsX	0.83
PF00753	Lactamase_B	0.83
PF12172	DUF35_N	0.83
PF12850	Metallophos_2	0.83
PF07690	MFS_1	0.83
PF10040	CRISPR_Cas6	0.83
PF05942	PaREP1	0.83
PF01137	RTC	0.83
PF04014	MazE_antitoxin	0.83
PF01451	LMWPc	0.83
PF02778	tRNA_int_endo_N	0.83
PF01177	Asp_Glu_race	0.83
PF00108	Thiolase_N	0.83
PF02384	N6_Mtase	0.83
PF02663	FmdE	0.83
PF08423	Rad51	0.83
PF00899	ThiF	0.83
PF13476	AAA_23	0.83
PF16795	Phage_integr_3	0.83
PF14947	HTH_45	0.83
PF01402	RHH_1	0.83
PF01909	NTP_transf_2	0.83
PF13401	AAA_22	0.83
PF02195	ParBc	0.83
PF00005	ABC_tran	0.83
PF01850	PIN	0.83
PF08735	DUF1786	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	10.83
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	10.83
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	10.83
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.67
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.83
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.83
COG1676	tRNA splicing endonuclease subunit SEN34	Translation, ribosomal structure and biogenesis [J]	0.83
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.83
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.83
COG2191	Formylmethanofuran dehydrogenase subunit E	Energy production and conversion [C]	0.83
COG4012	Uncharacterized protein, DUF1786 family, actin-like ATPase superfamily	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	70.00 %
Unclassified	root	N/A	25.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	50.83 %
Unclassified	root	N/A	25.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.17 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	45.83 %
Unclassified	root	N/A	25.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.17 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.83 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	37.50 %
Unclassified	root	N/A	25.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.50 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1.67 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.83 %
unclassified Thermoplasmata	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	34.17 %
Unclassified	root	N/A	25.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.50 %
Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	1.67 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	1.67 %
Candidatus Bathyarchaeota archaeon BA1	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon BA1	1.67 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.83 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	34.17 %
Unclassified	root	N/A	25.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.50 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.67 %
Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	1.67 %
Candidatus Bathyarchaeota archaeon BA1	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon BA1	1.67 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	0.83 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	34.17 %
Unclassified	root	N/A	25.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.50 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.67 %
Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	1.67 %
Candidatus Bathyarchaeota archaeon BA1	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon BA1	1.67 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	0.83 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001751\|JGI2172J19969_10000994	All Organisms → cellular organisms → Archaea	12746	Open in IMG/M
3300001751\|JGI2172J19969_10002061	Not Available	9135	Open in IMG/M
3300001752\|JGI2173J19968_10010006	All Organisms → cellular organisms → Archaea → TACK group	3532	Open in IMG/M
3300001782\|WOR52_10004245	All Organisms → cellular organisms → Archaea	23487	Open in IMG/M
3300002530\|C687J35503_10106832	All Organisms → cellular organisms → Archaea	715	Open in IMG/M
3300003830\|Ga0051980_10047548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2812	Open in IMG/M
3300003891\|Ga0063011_10001716	All Organisms → cellular organisms → Archaea → TACK group	2484	Open in IMG/M
3300003891\|Ga0063011_10141529	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	735	Open in IMG/M
3300004239\|Ga0066650_10321693	Not Available	751	Open in IMG/M
3300004239\|Ga0066650_10412509	Not Available	639	Open in IMG/M
3300005236\|Ga0066636_10006126	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	7733	Open in IMG/M
3300008004\|Ga0100395_1211638	Not Available	834	Open in IMG/M
3300008005\|Ga0100385_1173906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1106	Open in IMG/M
3300008020\|Ga0100398_1184662	Not Available	1003	Open in IMG/M
3300009034\|Ga0115863_1011977	All Organisms → cellular organisms → Archaea	12337	Open in IMG/M
3300009034\|Ga0115863_1025057	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	8048	Open in IMG/M
3300009034\|Ga0115863_1140376	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2965	Open in IMG/M
3300009503\|Ga0123519_10005236	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	20756	Open in IMG/M
3300009503\|Ga0123519_10351890	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	879	Open in IMG/M
3300009943\|Ga0117933_1073729	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7560	Open in IMG/M
3300009943\|Ga0117933_1331826	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	958	Open in IMG/M
3300009943\|Ga0117933_1647677	Not Available	764	Open in IMG/M
3300009945\|Ga0117932_1120643	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1036	Open in IMG/M
3300010243\|Ga0136485_1004624	Not Available	768	Open in IMG/M
3300010324\|Ga0129297_10527647	Not Available	517	Open in IMG/M
3300010328\|Ga0129298_10049617	Not Available	2001	Open in IMG/M
3300010328\|Ga0129298_10462663	Not Available	578	Open in IMG/M
3300010938\|Ga0137716_10022397	All Organisms → cellular organisms → Archaea	8904	Open in IMG/M
3300010938\|Ga0137716_10060229	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3506	Open in IMG/M
3300010938\|Ga0137716_10158416	Not Available	1487	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10000184	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	38951	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10007687	All Organisms → cellular organisms → Archaea	7960	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10033114	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3556	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10068654	Not Available	2307	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10722736	Not Available	564	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10072751	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2341	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10103932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1894	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10166655	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1430	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10205094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1261	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10531418	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	702	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10789006	Not Available	553	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10882664	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	518	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10899921	Not Available	512	Open in IMG/M
(restricted) 3300013133\|Ga0172362_11084105	Not Available	526	Open in IMG/M
3300013233\|Ga0172420_10358518	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1093	Open in IMG/M
3300013233\|Ga0172420_10764162	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	722	Open in IMG/M
3300013233\|Ga0172420_11212389	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	564	Open in IMG/M
3300014886\|Ga0180300_10041677	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1972	Open in IMG/M
3300014886\|Ga0180300_10184742	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	765	Open in IMG/M
3300015370\|Ga0180009_10304613	All Organisms → cellular organisms → Archaea → TACK group	662	Open in IMG/M
3300021493\|Ga0190306_1039959	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	775	Open in IMG/M
3300022217\|Ga0224514_10165645	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	780	Open in IMG/M
3300022223\|Ga0224501_10431967	Not Available	644	Open in IMG/M
3300022547\|Ga0212126_1036597	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1721	Open in IMG/M
3300022551\|Ga0212089_10431268	Not Available	594	Open in IMG/M
3300024263\|Ga0209978_10012664	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4047	Open in IMG/M
3300024423\|Ga0190286_1021357	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1903	Open in IMG/M
3300024423\|Ga0190286_1039210	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1326	Open in IMG/M
3300025022\|Ga0210056_1014106	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	4958	Open in IMG/M
3300025022\|Ga0210056_1269967	Not Available	546	Open in IMG/M
3300025031\|Ga0210024_1050819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1596	Open in IMG/M
3300025129\|Ga0210027_1262880	Not Available	607	Open in IMG/M
3300025139\|Ga0210021_1264852	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	602	Open in IMG/M
3300025146\|Ga0209322_10095439	All Organisms → cellular organisms → Archaea → TACK group	1373	Open in IMG/M
3300025167\|Ga0209642_10391664	All Organisms → cellular organisms → Archaea	779	Open in IMG/M
3300025842\|Ga0210054_1285074	Not Available	538	Open in IMG/M
3300027323\|Ga0209426_1074412	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	595	Open in IMG/M
3300027863\|Ga0207433_10100130	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2673	Open in IMG/M
3300027888\|Ga0209635_10010044	Not Available	7484	Open in IMG/M
3300027893\|Ga0209636_10007637	All Organisms → cellular organisms → Archaea	11020	Open in IMG/M
3300027893\|Ga0209636_10159532	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2109	Open in IMG/M
3300031463\|Ga0272448_1000751	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	47339	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1019797	All Organisms → cellular organisms → Archaea	3342	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1119388	Not Available	1059	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1210266	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	714	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1296539	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	557	Open in IMG/M
(restricted) 3300031593\|Ga0315307_1069905	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1304	Open in IMG/M
(restricted) 3300031593\|Ga0315307_1151873	Not Available	796	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1021251	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	3288	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1173252	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon BA1	854	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1199699	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	773	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1290198	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	590	Open in IMG/M
3300031746\|Ga0315293_10069060	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3035	Open in IMG/M
(restricted) 3300031806\|Ga0315306_10078042	Not Available	1278	Open in IMG/M
(restricted) 3300031806\|Ga0315306_10168074	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	823	Open in IMG/M
3300031862\|Ga0315280_10000527	All Organisms → cellular organisms → Archaea	71025	Open in IMG/M
3300031862\|Ga0315280_10000720	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	60405	Open in IMG/M
3300031862\|Ga0315280_10020845	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	7029	Open in IMG/M
3300031862\|Ga0315280_10026953	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	5797	Open in IMG/M
3300031862\|Ga0315280_10044374	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	3939	Open in IMG/M
3300031862\|Ga0315280_10051210	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3523	Open in IMG/M
3300031862\|Ga0315280_10095963	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2124	Open in IMG/M
3300031862\|Ga0315280_10099857	All Organisms → cellular organisms → Archaea	2054	Open in IMG/M
3300031862\|Ga0315280_10404813	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	627	Open in IMG/M
3300031862\|Ga0315280_10536065	Not Available	500	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10335573	Not Available	627	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1000154	All Organisms → cellular organisms → Archaea	88810	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1000764	All Organisms → cellular organisms → Archaea	32090	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1000972	All Organisms → cellular organisms → Archaea	27602	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1001007	All Organisms → cellular organisms → Archaea	27015	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1002851	All Organisms → cellular organisms → Archaea	13991	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1008196	All Organisms → cellular organisms → Archaea	7067	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1015824	All Organisms → cellular organisms → Archaea	4582	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1022007	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	3659	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1024021	All Organisms → cellular organisms → Archaea	3439	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1086268	All Organisms → cellular organisms → Archaea → TACK group	1359	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1000045	All Organisms → cellular organisms → Archaea	242695	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1000559	All Organisms → cellular organisms → Archaea	41096	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1018396	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	3308	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1073267	Not Available	1178	Open in IMG/M
3300032020\|Ga0315296_10026735	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon BA1	4098	Open in IMG/M
3300032069\|Ga0315282_10000019	All Organisms → cellular organisms → Archaea	409600	Open in IMG/M
3300032069\|Ga0315282_10004195	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	25235	Open in IMG/M
3300032069\|Ga0315282_10045773	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4916	Open in IMG/M
3300032069\|Ga0315282_10156348	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1783	Open in IMG/M
3300032069\|Ga0315282_10467243	Not Available	729	Open in IMG/M
3300032173\|Ga0315268_10105657	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300032173\|Ga0315268_10778479	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon CG07_land_8_20_14_0_80_47_9	957	Open in IMG/M
3300032173\|Ga0315268_12674687	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	512	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.50%
Terrestrial	Environmental → Terrestrial	2.50%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	65.83%
Marine	Environmental → Aquatic → Marine	19.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	11.67%
Soil	Environmental → Terrestrial → Soil	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	54.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	11.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	11.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.67%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	6.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.33%
Sediment	Environmental → Aquatic → Marine → Sediment	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	1.67%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	54.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	11.67%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	6.67%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	4.17%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	4.17%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	4.17%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	3.33%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	3.33%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.50%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	50.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.83%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	5.83%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	5.00%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	3.33%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	2.50%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	2.50%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	2.50%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Fe-Si Sediment	2.50%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	2.50%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.67%
Hydrothermal Vent Microbial Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Vent Microbial Mat	1.67%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.67%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.67%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.67%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	0.83%
Hydrothermal Vent Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Hydrothermal Vent Sediment	0.83%
Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	0.83%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Sediment	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.83%
Hot Spring Water Column	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Water Column	0.83%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300001782	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples	Environmental	Open in IMG/M
3300002530	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_3	Environmental	Open in IMG/M
3300003830	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter	Environmental	Open in IMG/M
3300003891	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing sample CP Core 1 1cm	Environmental	Open in IMG/M
3300004239	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all	Environmental	Open in IMG/M
3300005236	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80	Environmental	Open in IMG/M
3300008004	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-19	Environmental	Open in IMG/M
3300008005	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-09	Environmental	Open in IMG/M
3300008020	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-22	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009943	Combined Assembly of Gp0139325, Gp0139347, Gp0139348	Environmental	Open in IMG/M
3300009945	Combined Assembly of Gp0139326, Gp0139349, Gp0139350, Gp0139351	Environmental	Open in IMG/M
3300010243	Marine sediment microbial community from clay-turbidite interface sediment within the South China Sea	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300013233	Combined Assembly of Gp0198154, Gp0198156, Gp0198157, Gp0198161	Environmental	Open in IMG/M
3300014886	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay15, Core 4569-2, 21-24 cm	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300021493	Hydrothermal vent sediment bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4870-07-3-4_MG	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022547	Wilbur_combined assembly	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300024263	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)	Environmental	Open in IMG/M
3300024423	Hydrothermal vent microbial mat bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4869-18-3-4_MG	Environmental	Open in IMG/M
3300025022	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80 (SPAdes)	Environmental	Open in IMG/M
3300025031	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-25 (SPAdes)	Environmental	Open in IMG/M
3300025129	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-10 (SPAdes)	Environmental	Open in IMG/M
3300025139	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17 (SPAdes)	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025842	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16 (SPAdes)	Environmental	Open in IMG/M
3300027323	Deep oceanic, basalt-hosted subsurface ecosystem from Juan de Fuca Ridge flank, Pacific Ocean, CORK Borehole 1362B_J2.571 (SPAdes)	Environmental	Open in IMG/M
3300027863	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300031463	Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-019-1	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031593 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP2	Environmental	Open in IMG/M
3300031604 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031806 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP1	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031898 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI2172J19969_100009941	3300001751	Marine Sediment	MSXIKPVKKIVFITARLVEDPEXYKNKTNTDXEKEILQEINSIPYVARIEKVKVVDYH*
JGI2172J19969_1000206112	3300001751	Marine Sediment	MSKIKPVKKIVFITARLVEDPEAYKNKTNTDIEKEILQEINSIPYVARIEKVKVVDYH*
JGI2173J19968_100100063	3300001752	Marine Sediment	MSKIKPVKKIVFITARLVEDPEVYKNKTNTDIEKEILQEINSIPYVARIEKVKVVDYH*
WOR52_1000424525	3300001782	Marine Sediment	MPRIKPMKKIVFITAWLVEDSEAYKNKTNADIEKEILQEIDLIPYVVRIEKVTVVDCH*
C687J35503_101068323	3300002530	Soil	MVFITAWLVNDPEAYKDKSAEIEKEIMDEIGPIPYVARLEKATVLNCPKNLQPE
Ga0051980_100475483	3300003830	Groundwater	MCLKKIVFITAHLVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTVLDYPG*
Ga0063011_100017162	3300003891	Hot Spring Sediments	MKKVVFIYARLVEDSEAYEGKTNADIEKEILEDMGLIPYVANIEKVTVLDCH*
Ga0063011_101415291	3300003891	Hot Spring Sediments	LVKKMVFIVAQLVDDEEAYKGKTNQDIEKEIQTEMPIIPYVAKIEKVTVLDC*
Ga0066650_103216932	3300004239	Groundwater	LKKIVFITAHLIPEAEAYENKTNEDVEKEILNKMPNIPYVTKIEKVTVLDYKG*
Ga0066650_104125091	3300004239	Groundwater	MKKIKKVVFICAQLIENPEAYEGKTNADLEKEISREIGPIPYVTQIEKVTVLDYPE*
Ga0066636_100061268	3300005236	Groundwater	MKKKAIITVRLVPTPEAYEGKTNRDVEKEILDEMPTIPYMAQIEKVTVLDC*
Ga0100395_12116381	3300008004	Aquifer	MCLKKIVFITAHMVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTVLDYPG*
Ga0100385_11739063	3300008005	Aquifer	LKKIVFITAHLVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTVLDYPG*
Ga0100398_11846623	3300008020	Aquifer	MKKIKKVVFICAQLIENPEAYEGKTNADLEKEISREIGPIPYVTQIEK
Ga0115863_10119772	3300009034	Sediment, Intertidal	MSKIKPVKKIVFITARLVEDPEAYRNKTNADIEKEILQEINSIPYVVQIEKVKVVDYH*
Ga0115863_102505710	3300009034	Sediment, Intertidal	MPRIKPMKKIVFITAWLVEDSEAYKNKTNADIEKEILQEIGLIPYVVRIEKVTVVDCH*
Ga0115863_11403762	3300009034	Sediment, Intertidal	MSKIKPVKKIVFITARLVEDPEAYKNKTNADIEKEILQEISSIPYVVHIEKVKVVDYH*
Ga0114921_101449562	3300009150	Deep Subsurface	MKHLPEQPVKKIAFITAWLVENPEAYKDKKNSDIEKEILEEISLIPYVARIEKVTVLDYRR*
Ga0123519_1000523621	3300009503	Hot Spring	MSKTVRVYMTKVKKVVVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRKL*
Ga0123519_103518901	3300009503	Hot Spring	KYAHAIKKVAFITAILIEDPEPYEGKTNADIEKEILEEIGPIPYVAKIEKVTVIDFNS*
Ga0117933_107372917	3300009943	Hot Spring Fe-Si Sediment	VKKALFICARLVNDPEAYKGKTNADIEKEILKEIGIIPYVARIEKVTVLGCPT*
Ga0117933_13318262	3300009943	Hot Spring Fe-Si Sediment	MVFIVAQLVDDEEAYKGKTNRGIEKEIQTEMPIIPYVAKIEKVTVLDC*
Ga0117933_16476771	3300009943	Hot Spring Fe-Si Sediment	VNGLKKVMFIVAHLVPNPEAYEGKSNEDVEKEILNELPVIPYVARIEKVTVLDC*
Ga0117932_11206432	3300009945	Hot Spring Water Column	MQQRSEPKMTKTKKIVFIYAQLVEEPEAYGGKTNADIEKEILKDIGLIPYVARIEKVTVLDCPP*
Ga0136485_10046242	3300010243	Marine Sediment	VGDLKKVMFIVAHLVPDPEAYEGKTNRDVENEILREMPVIPYVSRIEKVTVLDC*
Ga0129297_105276472	3300010324	Lake Sediment	MKKKALISAWLVKDPEAYKGKTNADIEKEILEEQPVIPYVARIEKVKVLDC*
Ga0129298_100496172	3300010328	Lake Sediment	MRKLTIITAWLTENTEAYKGKTNADIEKEILRGMPPIPYISRIEKVTVLDTRQGELPP*
Ga0129298_104626632	3300010328	Lake Sediment	MTIKKVVFIVASLVDTPEAYEGKTNADVEKEIQTEIPTIPYVARIEKVTVLDCGNKQHGFKSS*
Ga0137716_100223972	3300010938	Hot Spring Fe-Si Sediment	MVFIVAQLVDDEEAYKGKTNQDIEKEIQTEMPIIPYVAKIEKVTVLDC*
Ga0137716_100602294	3300010938	Hot Spring Fe-Si Sediment	MQQRSEPKMTKTKKIVFIYAQLVEEPEAYGGKTNADIEKEILDDIGLIPYVARIEKVTVLDCPP*
Ga0137716_101584162	3300010938	Hot Spring Fe-Si Sediment	MTKTKKVVFIYAQLVEEPEAYGGKTNADIEKEILDDIGLIPYVARIEKVTVLDCPP*
(restricted) Ga0172365_1000018416	3300013127	Sediment	MKKLAVILAQLVPTPEAYEGKTNADIEKEILEEMPAIPYVARIEKVTVLDLSS*
(restricted) Ga0172365_100076878	3300013127	Sediment	VKKILFICAKLIEDPEAYERKTNIEIEKEIAEEIGPIPYVARIEKVTVLDCPP*
(restricted) Ga0172365_100331144	3300013127	Sediment	MTKVKKVAVIRARLVENPEAYEGKTNTDIEKEILAEIGIIPYVARIEKVTVLDHQA*
(restricted) Ga0172365_100686545	3300013127	Sediment	MKKLVFIVAHLIETPEAYEDKSNTDIEKDILEEMPIIPYVARIEKVTVLDCPD*
(restricted) Ga0172365_107227363	3300013127	Sediment	MTKVKKVAVIHVRLVENPEAYEGKTNADIEKEILAEIGIIPYVARIEKVTVLD
(restricted) Ga0172366_100727512	3300013128	Sediment	MTKVKKVAVIHVRLVENPEAYEGKTNADIEKEILAEMGIIPYVARIEKVTVLDRQA*
(restricted) Ga0172366_101039321	3300013128	Sediment	VIRARLVENPEAYEGKTNADVEKEILAEIGVIPYVARIEKVTVLDHRA*
(restricted) Ga0172366_101666552	3300013128	Sediment	MTKVKKVAVIRARLVENPEAYEGKTNVDVEKEILAEAGIIPYVARIEKVTVLDQKA*
(restricted) Ga0172366_102050941	3300013128	Sediment	MTKVKKVAVIHARLVENPEAYEGKTNTDIEKEILAEIGIIPYVARIEKVTVLDHQA*
(restricted) Ga0172366_105314182	3300013128	Sediment	MTKVKKVAVIRARLVENPEAYKGKTNNDIEKEILAETGTIPYVARIEKVKVLDRQA*
(restricted) Ga0172366_107890062	3300013128	Sediment	VSSLKKIVFITALLVPDPDAYKGKTNKDVEKEILEELPVIPYVARIEKVTVLDAEG*
(restricted) Ga0172366_108826642	3300013128	Sediment	MTKVKKVAVIRARLVENPEAYEGKTNADVEKEILTEIGIIPYVARIEKVTVLDH*
(restricted) Ga0172366_108999212	3300013128	Sediment	MAKTKKVVFICAVLVEDSEAYEGKTNADIEKEILEEIGSVPYTARIEKVTVLDYPS*
(restricted) Ga0172362_110841051	3300013133	Sediment	AVILAQLVPTPEAYEGKTNADIEKEILEEMPAIPYVARIEKVTVLDLSS*
Ga0172420_103585183	3300013233	Marine	MKKMMFITAWLVEDPEAYKNKTNTDIEREIQKKIGLIPYVERIVKVTVMDCK*
Ga0172420_107641621	3300013233	Marine	MKKLALITAWLVEDPEAYKGRSNADIEKEILKEIVKGMSLIPYVARIEKVTVLDVDLCML
Ga0172420_112123891	3300013233	Marine	MSRAKHSCKKPIKKKMVFVTAWLVEDPEAYRNKTNTDIEREIQKEIGLIPYVERIVKVTVMDCE*
Ga0180300_100416771	3300014886	Marine Sediment	KIALITVWLVDDPEAYEGKTNSDIEKEILEDIGSIPYAARIEKITVLDCPDCDS*
Ga0180300_101847421	3300014886	Marine Sediment	MKKIALITVWLVDDPEAYEGKTNSDVEKEILEDIGSIPYAARIEKITVLDYPDCNA*
Ga0180009_103046132	3300015370	Groundwater	MSKKVVFIFAHLIEDPEAYKDKTNTDIEKEILKEINPIPYVKRIEKVTVLDC*
Ga0190306_10399591	3300021493	Hydrothermal Vent Sediment	MKKIALITVWLVDDPEAYEGKTNSDIEKEILEDIGSIPYAARIEKITVLDYPDCNA
Ga0224514_101656452	3300022217	Sediment	VPRIKPMKKIVFITAWLVEDSEAYKNKTNGDIEKEILQEIGLIPYVVRIEKVTVVDCH
Ga0224501_104319671	3300022223	Sediment	MVRVQMKKVVFICARLLEDPEPYQGKTNADIEKEILEEIGPIPYVTRIEKVTVLDCES
Ga0212126_10365973	3300022547	Hot Spring Sediment	MKKKAIITIILIEDPEAYKSKTNSDIEKEILEEIGPIPYAASVEKVTVIDFQKETKTRPT
Ga0212089_104312681	3300022551	Lake Sediment	MRKLTIITAWLTENTEAYKGKTNADIEKEILRGMPPIPYISRIEKVTVLDTRQGELPP
Ga0209978_100126645	3300024263	Deep Subsurface	MKHLPEQPVKKIAFITAWLVENPEAYKDKKNSDIEKEILEEISLIPYVARIEKVTVLDYR
Ga0190286_10213575	3300024423	Hydrothermal Vent Microbial Mat	MKKVSKVVFIFARLINNPEAYEGKTNEDIEREILEEIAPIPYVARIEKVTVLDYRDC
Ga0190286_10392104	3300024423	Hydrothermal Vent Microbial Mat	MNKVSKVVFIFARLINDPEAYEGKTNEDIEREILEEIGSIPYVARIEKVTVLDYQDC
Ga0210056_10141062	3300025022	Groundwater	MKKKAIITVRLVPTPEAYEGKTNRDVEKEILDEMPTIPYMAQIEKVTVLDC
Ga0210056_12699671	3300025022	Groundwater	MKKIKKVVFICAQLIENPEAYEGKTNADLEKEISREIGPIPYVTQIEKVTVLDYPE
Ga0210024_10508193	3300025031	Aquifer	MCLKKIVFITAHLVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIE
Ga0210027_12628801	3300025129	Aquifer	MCLKKIVFITAHMVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTVLDYPG
Ga0210021_12648522	3300025139	Aquifer	MCLKKIVFITAHLVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTV
Ga0209322_100954393	3300025146	Soil	VKKVLFICAKLIEDSEAYEGKTNIEIEKEIAEEVGPIPYVARIEKVTVLDCPP
Ga0209642_103916642	3300025167	Soil	LSKKRKQPALKRIVLITAWLVDDPEAYRDKTNIDIEKEITEEIDIIPYVERIEKVTVLDCPR
Ga0210054_12850741	3300025842	Aquifer	ITAHLVPDPEAYEGKTNKDVEKEILEELPVIPYVAKIEKVTVLDYPG
Ga0209426_10744122	3300027323	Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	VKMKKVVFIYARLVEDPEAYQGKTNADIEKEILEEIGPIPYVTLIEKVTVLDCP
Ga0207433_101001302	3300027863	Hot Spring	MSKTVRVYMTKVKKVVVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRKL
Ga0209635_100100443	3300027888	Marine Sediment	MSKIKPVKKIVFITARLVEDPEAYKNKTNTDIEKEILQEINSIPYVARIEKVKVVDYH
Ga0209636_1000763712	3300027893	Marine Sediment	MPRIKPMKKIVFITAWLVEDSEAYKNKTNADIEKEILQEIDLIPYVVRIEKVTVVDCH
Ga0209636_101595323	3300027893	Marine Sediment	MSKIKPVKKIVFITARLVEDPEVYKNKTNTDIEKEILQEINSIPYVARIEKVKVVDYH
Ga0272448_100075122	3300031463	Sediment	VKKVLFICARLVNDPEAYKGKTNADIEKEILKEIGIIPYVARIEKVTVLDCPT
(restricted) Ga0315308_10197972	3300031587	Sediment	VKKLVIITAWLVETPEAYEGKTNQDVEEEILEKAPAIPYVARIERVTVLDVE
(restricted) Ga0315308_11193882	3300031587	Sediment	MKKKALISAWLVKDPEAYKGKTNADIEKEILEEQPIIPYVARIEKVKVLDC
(restricted) Ga0315308_12102663	3300031587	Sediment	MKKVLFIYAALVDDSEAYEGKTNADIEKEILAEIGIIPYVARIEKVTVLDHQT
(restricted) Ga0315308_12965392	3300031587	Sediment	MTKIKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRQA
(restricted) Ga0315307_10699054	3300031593	Sediment	MKHPFMKKIAFITAWLVDDLEAYKDKTNPDIEKEILEEIGLIPYVARIEKVTVLDCR
(restricted) Ga0315307_11518731	3300031593	Sediment	MKKKALISAWLVKDPEAYKGKTNADIEKEILEEQPVIPYVARIEKVKVLDC
(restricted) Ga0315309_10212513	3300031604	Sediment	MSKRKHSTERAVKKMLFITATLLDNPEAYKGKMNADIEKEISEEIGIIPYVARIEKVTVLDYQ
(restricted) Ga0315309_11732522	3300031604	Sediment	MKKLVFIVAHLVETPEAYEGKSNTDIEKEILEEMPVIPYVGRIEKVTVLDCPNXLDAHVH
(restricted) Ga0315309_11996992	3300031604	Sediment	MPQHKQNRGVDMTKVKKVAVIRARLVENPEAYEGKTNTDVEKEILAEIGIIPYVARIEKVTVLDHQA
(restricted) Ga0315309_12901981	3300031604	Sediment	MTKTKKVVFIYALLVEEPEAYEGKTNADVEKEISEETGPIPYVARIEKVTVLDCPT
Ga0315293_100690606	3300031746	Sediment	MKKVMFIVARLVPDPEAYEGKSNEDVEKEILDELPAIPYMARIEKVTVVDAA
(restricted) Ga0315306_100780421	3300031806	Sediment	MKKKALISAWLVKDPEAYKGKTNADIEKEILEEQPVIPYVARIEKVKV
(restricted) Ga0315306_101680742	3300031806	Sediment	MTKVKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDHQA
Ga0315280_1000052732	3300031862	Sediment	MKKVVFITALLVDNPKAFKGKTNSDIEKEILEGIGSIPYVAKIDKVTVLDYET
Ga0315280_1000072042	3300031862	Sediment	MTKVKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGIIPYVARIEKVTVLDRKL
Ga0315280_100208456	3300031862	Sediment	IITVRLVPTPEAYEGKTNRDVEKEILDEMPTIPYMAQIEKVTVLDC
Ga0315280_100269533	3300031862	Sediment	MKKIVFIAAYLVEDPEAYEGKTNADVEKEILEEINPIPYVARIEKVTVLDCSTQ
Ga0315280_100443747	3300031862	Sediment	MKKKAIITVRLVPTPEAYEGKTNRDVEKEILDEMPTIPYMVQIEKVTVLDC
Ga0315280_100512102	3300031862	Sediment	MAKVKKVVFIYARLIDDPDAYKGKTNADVEKEILEEIGSIPYVAQIEKVSVLDHPT
Ga0315280_100959633	3300031862	Sediment	MAKTKKVVFICAVLVEDPEAYEGKTNADIEKEILEEIGSVPYTARIEKVTVLDYPS
Ga0315280_100998571	3300031862	Sediment	MKKIVFIAAYLVEDPEAYEGKTNADVEKEILEEISPIPYVARIEKVTVLDCPTQ
Ga0315280_104048132	3300031862	Sediment	MTKIKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRKL
Ga0315280_105360651	3300031862	Sediment	VRKVVFIYAWLIEDSSAYEGKTNEEIEKEILEEICPIPYVARIEKVT
(restricted) Ga0315310_103355732	3300031876	Sediment	KLAFIVAWLVEDPEAYEGKTNADVEKEILEEAPTIPYVARIEKVTVLDVGQA
(restricted) Ga0315314_100015444	3300031877	Sediment	VKKIALIAARLVEDPEAYRGKSNTDIEKEIMEETLTIPYVARIEKVTVIDIG
(restricted) Ga0315314_10007644	3300031877	Sediment	MQVKKLAFIVARLVEEEEAYEGKTNHDVEEEILEEMPAIPYVAKIDKVTVLDC
(restricted) Ga0315314_10009725	3300031877	Sediment	LKKKKRKIAFIVAWLINHPEAYEGKTNADIEQEILKETSRIPYVARIEKVSVIDIPQEKEKS
(restricted) Ga0315314_100100725	3300031877	Sediment	VKKLVIITAWLVETPEAYKGKANQDVEKEILEKAPTIPYVARIERVTVLDVE
(restricted) Ga0315314_10028514	3300031877	Sediment	MQVKKLAFIVARLVGEEEAYESKTNHDVEKEILEEMPVIPYVAKIDKVTVLDC
(restricted) Ga0315314_10081969	3300031877	Sediment	MKKVVFIYARLVEDSAAYEGKTNADIEKEILEDIGLIPYVESIEKVTVLDCPT
(restricted) Ga0315314_10158246	3300031877	Sediment	VKKLVIITAWLVETPEAYKGKANQDVEKEILEKALSIPYVARIEKVTVLDVE
(restricted) Ga0315314_10220074	3300031877	Sediment	MKKIVFIAAYLVEDPEAYEGKTNTDVEKEILEEISPIPYVARIEKVTVLDCPT
(restricted) Ga0315314_10240212	3300031877	Sediment	MKKIAFISAWLVEDPEAYKGKTNADIEKEILEEQVVIPYVARIEKVTVLDCQT
(restricted) Ga0315314_10862683	3300031877	Sediment	MKKPKKVLFMYAELVKDPEAYKDKTNADIEKEILGEIGPIPYVARIEKITVLDCPP
(restricted) Ga0315312_1000045282	3300031898	Sediment	VSSVKIAFIVCRLVPTPEAYEGKTNADIEKEILEEVLAIPYVARIEKVTVLDVEG
(restricted) Ga0315312_100055933	3300031898	Sediment	MQVKKLAFIVARLVEEEEAYEGKTNHDVEKEILEEMPAIPYVAKIDKVTVLDC
(restricted) Ga0315312_10183966	3300031898	Sediment	MKKIVFIAAYLVEDPEAYEGKTNADVEKEILEEISPIPYMARIEKVTVLDCPTQ
(restricted) Ga0315312_10732672	3300031898	Sediment	MKKVVFIYAWLIEDMEAYKGKTNADIEREILEEISPIPYVARIEKVTVLDCKHDAHVHE
Ga0315296_100267355	3300032020	Sediment	MKKRAIITVRLIPTPEAYEGKTNRDVEKEILDEMPTIPYMAQIEKVTVLDC
Ga0315282_100000196	3300032069	Sediment	VSDLRKIAFIVLSLVEAPEAYEGKTNRDVEREILSGLPAIPYVARVEKVTVLDEE
Ga0315282_1000419520	3300032069	Sediment	MTKVKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRKL
Ga0315282_100457735	3300032069	Sediment	VKKIMFIVAHLVPDPEAYEGKTNEDVEKEILDELPVIPYVARVEKVTVLDCP
Ga0315282_101563482	3300032069	Sediment	MTKIKKVAVIHARLVENPEAYESKTNADIEKEILEETGPIPYVARIEKVTVLDCPT
Ga0315282_104672431	3300032069	Sediment	MQNQICIKVRPMKKIMFIVAXLVETPEAYEGKTNEDIEKEILNELQKQAVPAIPYMTYVEKVTVLDCPS
Ga0315268_101056571	3300032173	Sediment	MELEKRPVKKVMFIVARLVEAPEAYEGKTNEDVEKEILDELPVIPYVARVEKVTVLDCP
Ga0315268_107784791	3300032173	Sediment	TVRLIPTPEAYEGKTNRDVEKEILDEMPTIPYIAQIEKVTVLDC
Ga0315268_126746871	3300032173	Sediment	HNISKTARVYMTKVKKVAVIHARLVENPEAYEGKTNADIEKEILAEIGVIPYVARIEKVTVLDRQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters