Metagenome / Metatranscriptome Family F072829

Basic Information
Family ID	F072829
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	55 residues
Representative Sequence	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEEKND
Number of Associated Samples	34
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	78.33 %
% of genes near scaffold ends (potentially truncated)	11.57 %
% of genes from short scaffolds (< 2000 bps)	53.72 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Archaea (64.463 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (55.372 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (85.950 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.66% β-sheet: 0.00% Coil/Unstructured: 46.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF05014	Nuc_deoxyrib_tr	16.53
PF02562	PhoH	11.57
PF00860	Xan_ur_permease	10.74
PF00574	CLP_protease	6.61
PF02540	NAD_synthase	2.48
PF00075	RNase_H	1.65
PF01068	DNA_ligase_A_M	1.65
PF02518	HATPase_c	1.65
PF01381	HTH_3	1.65
PF02086	MethyltransfD12	1.65
PF13730	HTH_36	1.65
PF13638	PIN_4	0.83
PF13479	AAA_24	0.83
PF13240	zinc_ribbon_2	0.83
PF00202	Aminotran_3	0.83
PF00692	dUTPase	0.83
PF10269	Tmemb_185A	0.83
PF03989	DNA_gyraseA_C	0.83
PF01471	PG_binding_1	0.83
PF02592	Vut_1	0.83
PF09682	Phage_holin_6_1	0.83
PF07155	ECF-ribofla_trS	0.83
PF01541	GIY-YIG	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	16.53
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	13.22
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	13.22
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	11.57
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	11.57
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	6.61
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	2.48
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	1.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.65
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	1.65
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.83
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.83
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.83
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.83
COG4720	ECF-type riboflavin transporter, membrane (S) component	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.69 %
Unclassified	root	N/A	22.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.38 %
Unclassified	root	N/A	22.31 %
Viruses	superkingdom	All Organisms → Viruses	3.31 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	64.46 %
Unclassified	root	N/A	22.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.92 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.31 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	64.46 %
Unclassified	root	N/A	22.31 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.48 %

Name	Rank	Taxonomy	Distribution
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	64.46 %
Unclassified	root	N/A	22.31 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %

Name	Rank	Taxonomy	Distribution
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	64.46 %
Unclassified	root	N/A	22.31 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %

Name	Rank	Taxonomy	Distribution
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	64.46 %
Unclassified	root	N/A	22.31 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %

Name	Rank	Taxonomy	Distribution
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	64.46 %
Unclassified	root	N/A	22.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.83 %

Name	Rank	Taxonomy	Distribution
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	64.46 %
Unclassified	root	N/A	22.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	64.46 %
Unclassified	root	N/A	22.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.83 %

Name	Rank	Taxonomy	Distribution
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	64.46 %
Unclassified	root	N/A	22.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001484\|rank12_10497501	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	550	Open in IMG/M
3300009869\|Ga0130078_12648639	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	664	Open in IMG/M
3300009872\|Ga0130079_13846417	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	588	Open in IMG/M
3300009872\|Ga0130079_13877440	Not Available	677	Open in IMG/M
3300009872\|Ga0130079_13916778	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	984	Open in IMG/M
3300010976\|Ga0138317_1191285	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	767	Open in IMG/M
3300012983\|Ga0123349_10565078	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	795	Open in IMG/M
3300012983\|Ga0123349_10711827	Not Available	707	Open in IMG/M
3300021254\|Ga0223824_10000317	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	61303	Open in IMG/M
3300021254\|Ga0223824_10010126	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	9359	Open in IMG/M
3300021254\|Ga0223824_10034464	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	4707	Open in IMG/M
3300021254\|Ga0223824_10039298	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	4379	Open in IMG/M
3300021254\|Ga0223824_10039397	All Organisms → cellular organisms → Bacteria	4373	Open in IMG/M
3300021254\|Ga0223824_10071543	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	3174	Open in IMG/M
3300021254\|Ga0223824_10223418	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1680	Open in IMG/M
3300021254\|Ga0223824_10259021	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1536	Open in IMG/M
3300021254\|Ga0223824_10509812	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300021254\|Ga0223824_10636151	Not Available	848	Open in IMG/M
3300021254\|Ga0223824_10637874	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	846	Open in IMG/M
3300021254\|Ga0223824_10640098	Not Available	844	Open in IMG/M
3300021254\|Ga0223824_11057530	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	581	Open in IMG/M
3300021255\|Ga0223825_11053045	Not Available	14045	Open in IMG/M
3300021255\|Ga0223825_11094528	All Organisms → cellular organisms → Bacteria	5554	Open in IMG/M
3300021255\|Ga0223825_11323260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	189572	Open in IMG/M
3300021255\|Ga0223825_11383123	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	7310	Open in IMG/M
3300021255\|Ga0223825_11442062	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1973	Open in IMG/M
3300021255\|Ga0223825_12307238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2169	Open in IMG/M
3300021255\|Ga0223825_12637378	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	758	Open in IMG/M
3300021255\|Ga0223825_12766648	Not Available	1515	Open in IMG/M
3300021255\|Ga0223825_12766649	Not Available	2617	Open in IMG/M
3300021256\|Ga0223826_10025083	Not Available	5857	Open in IMG/M
3300021256\|Ga0223826_10034928	All Organisms → cellular organisms → Bacteria	4808	Open in IMG/M
3300021256\|Ga0223826_10848098	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	658	Open in IMG/M
3300021387\|Ga0223845_10876549	Not Available	652	Open in IMG/M
3300021387\|Ga0223845_11189228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	179940	Open in IMG/M
3300021399\|Ga0224415_10000056	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	182655	Open in IMG/M
3300021399\|Ga0224415_10000067	Not Available	169338	Open in IMG/M
3300021399\|Ga0224415_10000639	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	46539	Open in IMG/M
3300021399\|Ga0224415_10006846	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	11741	Open in IMG/M
3300021399\|Ga0224415_10028881	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	5151	Open in IMG/M
3300021399\|Ga0224415_10079304	Not Available	3033	Open in IMG/M
3300021400\|Ga0224422_10142582	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1306	Open in IMG/M
3300021400\|Ga0224422_10384388	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300021400\|Ga0224422_10403100	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	61434	Open in IMG/M
3300021400\|Ga0224422_10725558	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	15445	Open in IMG/M
3300021400\|Ga0224422_12129929	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1502	Open in IMG/M
3300021400\|Ga0224422_12591483	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	89280	Open in IMG/M
3300021426\|Ga0224482_10003274	Not Available	21013	Open in IMG/M
3300021431\|Ga0224423_10035239	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	4976	Open in IMG/M
3300024337\|Ga0255060_10013307	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	3037	Open in IMG/M
3300024337\|Ga0255060_10100890	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1331	Open in IMG/M
3300024337\|Ga0255060_10149714	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1112	Open in IMG/M
3300024337\|Ga0255060_10556645	Not Available	579	Open in IMG/M
3300024342\|Ga0255061_10000283	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	13976	Open in IMG/M
3300024342\|Ga0255061_10000573	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	10768	Open in IMG/M
3300024342\|Ga0255061_10000709	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	10035	Open in IMG/M
3300024342\|Ga0255061_10002211	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	6476	Open in IMG/M
3300024342\|Ga0255061_10067216	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300024342\|Ga0255061_10142306	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1213	Open in IMG/M
3300024342\|Ga0255061_10201694	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1023	Open in IMG/M
3300024342\|Ga0255061_10249329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	919	Open in IMG/M
3300024342\|Ga0255061_10364304	Not Available	753	Open in IMG/M
3300024342\|Ga0255061_10464887	Not Available	662	Open in IMG/M
3300024345\|Ga0255062_10250953	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	846	Open in IMG/M
3300024345\|Ga0255062_10462132	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	616	Open in IMG/M
3300024345\|Ga0255062_10468333	Not Available	612	Open in IMG/M
3300024486\|Ga0255059_10104117	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1266	Open in IMG/M
3300024486\|Ga0255059_10251252	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	819	Open in IMG/M
3300028048\|Ga0256405_10003344	Not Available	33322	Open in IMG/M
3300028555\|Ga0302048_1253533	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	642	Open in IMG/M
3300028591\|Ga0247611_10001941	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	35310	Open in IMG/M
3300028591\|Ga0247611_10014251	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	8848	Open in IMG/M
3300028591\|Ga0247611_10016026	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	8214	Open in IMG/M
3300028591\|Ga0247611_10078870	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300028591\|Ga0247611_10124646	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2686	Open in IMG/M
3300028591\|Ga0247611_10148346	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2462	Open in IMG/M
3300028591\|Ga0247611_10176541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2256	Open in IMG/M
3300028591\|Ga0247611_10313625	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1686	Open in IMG/M
3300028591\|Ga0247611_10526499	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1268	Open in IMG/M
3300028591\|Ga0247611_10730436	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1044	Open in IMG/M
3300028591\|Ga0247611_10880124	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	931	Open in IMG/M
3300028805\|Ga0247608_10000152	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	133082	Open in IMG/M
3300028805\|Ga0247608_10000942	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	43114	Open in IMG/M
3300028805\|Ga0247608_10017051	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	6878	Open in IMG/M
3300028805\|Ga0247608_10441041	Not Available	1286	Open in IMG/M
3300028805\|Ga0247608_10726905	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	953	Open in IMG/M
3300028805\|Ga0247608_10767674	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	921	Open in IMG/M
3300028833\|Ga0247610_10000045	Not Available	188358	Open in IMG/M
3300028833\|Ga0247610_10014856	All Organisms → cellular organisms → Bacteria	7756	Open in IMG/M
3300028833\|Ga0247610_10096905	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2933	Open in IMG/M
3300028833\|Ga0247610_10100461	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2882	Open in IMG/M
3300028833\|Ga0247610_10140745	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2444	Open in IMG/M
3300028833\|Ga0247610_10391378	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1456	Open in IMG/M
3300028833\|Ga0247610_10491864	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1284	Open in IMG/M
3300028833\|Ga0247610_10585750	Not Available	1163	Open in IMG/M
3300028833\|Ga0247610_11304104	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	712	Open in IMG/M
3300028833\|Ga0247610_12086766	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	516	Open in IMG/M
3300028888\|Ga0247609_10000139	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	102283	Open in IMG/M
3300028888\|Ga0247609_10163391	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2236	Open in IMG/M
3300028888\|Ga0247609_10466033	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1339	Open in IMG/M
3300028888\|Ga0247609_10868032	Not Available	938	Open in IMG/M
3300028888\|Ga0247609_11098250	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	811	Open in IMG/M
3300028888\|Ga0247609_11243229	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	749	Open in IMG/M
3300028888\|Ga0247609_12204757	Not Available	507	Open in IMG/M
3300030772\|Ga0061013_12456346	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	588	Open in IMG/M
3300030772\|Ga0061013_12489146	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	984	Open in IMG/M
3300030772\|Ga0061013_12495681	Not Available	677	Open in IMG/M
3300030915\|Ga0061011_11422851	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	559	Open in IMG/M
3300031760\|Ga0326513_10005531	Not Available	8985	Open in IMG/M
3300031760\|Ga0326513_10089908	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2493	Open in IMG/M
3300031760\|Ga0326513_10998858	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	740	Open in IMG/M
3300031853\|Ga0326514_10059599	All Organisms → cellular organisms → Bacteria	2906	Open in IMG/M
3300031853\|Ga0326514_10148193	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1951	Open in IMG/M
3300031867\|Ga0326511_10219572	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1827	Open in IMG/M
3300031992\|Ga0310694_10934869	Not Available	850	Open in IMG/M
3300031994\|Ga0310691_10109080	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2907	Open in IMG/M
3300031998\|Ga0310786_11309557	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	773	Open in IMG/M
3300032030\|Ga0310697_10637898	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1098	Open in IMG/M
3300032038\|Ga0326512_10000009	Not Available	166616	Open in IMG/M
3300032038\|Ga0326512_10005198	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	9444	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Foregut	Host-Associated → Mammals → Digestive System → Foregut	98.35%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	1.65%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	93.39%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	4.96%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	1.65%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	55.37%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	33.88%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	4.96%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	3.31%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	1.65%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	0.83%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001484	Sheep rumen microbial communities from New Zealand - Rank12_low	Host-Associated	Open in IMG/M
3300009869	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Corn Stover. Combined Assembly of Gp0148673, Gp0148674	Host-Associated	Open in IMG/M
3300009872	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Switchgrass. Combined Assembly of Gp0148675, Gp0148676	Host-Associated	Open in IMG/M
3300010976	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome) (version 4)	Host-Associated	Open in IMG/M
3300012983	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 Metagenome	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021399	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021426	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300021431	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300024337	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024342	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024345	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024486	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026526	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_05 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300028048	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_02	Host-Associated	Open in IMG/M
3300028555	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028888	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300030772	Coassembly of Cow X Switchgrass	Host-Associated	Open in IMG/M
3300030915	Coassembly of Cow X Corn Stover	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300031992	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032030	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rank12_104975012	3300001484	Sheep Rumen	MENFYNQLIDEYFKRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKEEANG*
Ga0130078_126486391	3300009869	Rumen	EDKYMYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKDE*
Ga0130079_138464172	3300009872	Rumen	MYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKDE*
Ga0130079_138774402	3300009872	Rumen	MRYFYDKLIEEYFNRHPEAGMAWWMLPLEQQPEGFKQEMYDIMWDLTHKEEVND*
Ga0130079_139167782	3300009872	Rumen	MEEFNMSEKKSITWDDIIDEYFNRHPDAGLAWWDLPLEDQPEEFKAMMYDIIWSLLKEDK
Ga0138317_11912852	3300010976	Fungi-Associated Bovine Rumen	IAEDKYMYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKDE*
Ga0123349_105650782	3300012983	Fecal	MGGKNMENLYDQLIDEYFRRHPDAGLAWWMLPVEEQPDGFKQEMYDIMWDLTHKEEANG*
Ga0123349_107118271	3300012983	Fecal	MKNFYDKLIDEYFNRHPDAGLAWWMLPLEEQPEGFKQEMYDIMWDLTHKEEANG*
Ga0223824_1000031725	3300021254	Cattle And Sheep Rumen	MYDKEQVWEDMIAEYFNRHPDAGLAWWMLPLKDQPEGFKLEMYDIIWDLTHKENKDE
Ga0223824_100101268	3300021254	Cattle And Sheep Rumen	MSEQRTIYNDMIDKYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKENKDE
Ga0223824_100344645	3300021254	Cattle And Sheep Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLKDQPEGFKQEMYDIMWDLTHKENKNESL
Ga0223824_100392982	3300021254	Cattle And Sheep Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEEEND
Ga0223824_100393973	3300021254	Cattle And Sheep Rumen	MEQNQKYGNLWEDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDIMWYLTHKEEVND
Ga0223824_100715437	3300021254	Cattle And Sheep Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKEETND
Ga0223824_102234186	3300021254	Cattle And Sheep Rumen	MSKHTIYDEMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEDSNE
Ga0223824_102590213	3300021254	Cattle And Sheep Rumen	MENLYDQLIDEYFKRHPDAGLAWWMLPLEEQPEGFKQEMYDIMWDLTHKEEANG
Ga0223824_105098123	3300021254	Cattle And Sheep Rumen	KSIGVIYMSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKENKD
Ga0223824_106361512	3300021254	Cattle And Sheep Rumen	MSEHTIYDEMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKENKNE
Ga0223824_106378741	3300021254	Cattle And Sheep Rumen	NLCLWHSIKWRNKMENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEEKND
Ga0223824_106400982	3300021254	Cattle And Sheep Rumen	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHKEQNTDVQ
Ga0223824_110575302	3300021254	Cattle And Sheep Rumen	MKNIYDEMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDILWDLTHKEE
Ga0223825_1105304513	3300021255	Cattle And Sheep Rumen	MEQNQKYGNLWDDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDIMWYLTHKEE
Ga0223825_1109452810	3300021255	Cattle And Sheep Rumen	MSEHTIYDEMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEDSNE
Ga0223825_1132326065	3300021255	Cattle And Sheep Rumen	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWNLTHKEQNTDVQ
Ga0223825_113831233	3300021255	Cattle And Sheep Rumen	MTNKQLWDNLIDEYFKRYPEAGLAWWQAPLDEQPEGYKIRMYDILWDLTYREEK
Ga0223825_114420623	3300021255	Cattle And Sheep Rumen	MNNIYEQMIDEYFKRHPDAGLAWWMLPLKEQPEGFKLEMYDILWDMTHKEERNE
Ga0223825_123072382	3300021255	Cattle And Sheep Rumen	MDTLYEQMVDEYFKRHPDAGLAWWILPLKEQPEGFKLEMYDIMWDLTHKDSN
Ga0223825_126373782	3300021255	Cattle And Sheep Rumen	MEQNQKYGNLWEDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEIYDILWDLTHKEGVND
Ga0223825_127666482	3300021255	Cattle And Sheep Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLKDQPEGFKQEMYDIMWDLTHKEETNG
Ga0223825_127666492	3300021255	Cattle And Sheep Rumen	MSKQRTFYDDMIDEYFKRHPDAGLAWWMLPLKDQPEGFKQEMYDIMWDLTHKEETNG
Ga0223826_100250833	3300021256	Cattle And Sheep Rumen	MEQNQKYGNLWDDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDIMWYLTHKEEVND
Ga0223826_100349286	3300021256	Cattle And Sheep Rumen	MEHENNFNKDLYDALIDEYFNRHPDAGLAWWMLPLNEQPEGFKQEMYDILWDLTHKEEK
Ga0223826_108480981	3300021256	Cattle And Sheep Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWDLTHKEEEND
Ga0223845_108765493	3300021387	Cattle And Sheep Rumen	MENFYNKLIDEYFRRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKEEVND
Ga0223845_11189228113	3300021387	Cattle And Sheep Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLKDQPEGFKQEMYDIMWDLTHKEDSNG
Ga0224415_10000056199	3300021399	Cattle And Sheep Rumen	MSEQHTIYDDMIDEYFNRHPDAGLAWWMLPLKEQPEGFKLEMYDILWDLTHKENKDE
Ga0224415_1000006753	3300021399	Cattle And Sheep Rumen	MPKRTIYDEMIDEYFNRHPDAGLAWWMLPVEQQPEGFKQEMYDILWDLTHKENKNESL
Ga0224415_1000063960	3300021399	Cattle And Sheep Rumen	MKNLYDQLIDEYFKRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHKEE
Ga0224415_1000684616	3300021399	Cattle And Sheep Rumen	MENFYNQLIDEYFKRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKEEANG
Ga0224415_100288815	3300021399	Cattle And Sheep Rumen	MMTNKQLWDKLIDEYFKRYPEAGLAWWQAPLDEQPEGYKIRMYDILWNLTYGEKK
Ga0224415_100793043	3300021399	Cattle And Sheep Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLKDQPEGFKQEMYDIMWDLTHKEEANG
Ga0224422_101425823	3300021400	Cattle And Sheep Rumen	MKNFYNKLIDEYFNRHPDAGLAWWMLPLEQQPDGFKQEMYDIMWDLTHKEEENG
Ga0224422_103843884	3300021400	Cattle And Sheep Rumen	MSNQKYDKKLLDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKIEMYDILWDMLHKEEENG
Ga0224422_1040310098	3300021400	Cattle And Sheep Rumen	MENLYDQLIDEYFKRHPDAGLAWWMLPLKEQPEGFKLEMYDIMWNLTHKEEPLNE
Ga0224422_1072555821	3300021400	Cattle And Sheep Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEEKND
Ga0224422_121299292	3300021400	Cattle And Sheep Rumen	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEEKND
Ga0224422_12591483108	3300021400	Cattle And Sheep Rumen	MKNFYEQMIDEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDILWDLTHKED
Ga0224482_1000327422	3300021426	Cattle And Sheep Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWHLTHKEDKDE
Ga0224423_1003523912	3300021431	Cattle And Sheep Rumen	MSKHTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWSLLNKT
Ga0255060_100133072	3300024337	Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKENKDE
Ga0255060_101008901	3300024337	Rumen	FYMEQNKIFSPIYDTMIEEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDILWDLTHKENKNELL
Ga0255060_101497142	3300024337	Rumen	MKDLYDKMIDEYFNRHPDAGLAWWMLPLDQQPEGFKQEMYDILWDLTHKEETNG
Ga0255060_105566453	3300024337	Rumen	EQHTIYDDMINEYFNRHPDAGLAWWMLPLKDQPEGFKLEMYDILWDLMHKENK
Ga0255061_1000028311	3300024342	Rumen	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEDKDE
Ga0255061_1000057314	3300024342	Rumen	MEQNKIFSPIYDTMIEEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDILWDLTHKENKNELL
Ga0255061_1000070916	3300024342	Rumen	MENIYNKMIEEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEAK
Ga0255061_100022117	3300024342	Rumen	MKDLYDKMIDEYFNRHPDAGLAWWMLPLDQQPEDFKQEMYDILWDLTHKEE
Ga0255061_100672163	3300024342	Rumen	MENKVTFREFWDIMIEEYFNRHPDAGLAWWMLPVEEQPEGFKQEMYDILWDLTHREE
Ga0255061_101423063	3300024342	Rumen	GGMYMSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWHLTHMEEKT
Ga0255061_102016942	3300024342	Rumen	MSEQRTIYNDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEAK
Ga0255061_102493291	3300024342	Rumen	MENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHKEQNADVQ
Ga0255061_103643041	3300024342	Rumen	KMENFYDKLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHKEQNAVK
Ga0255061_104648872	3300024342	Rumen	MENFYDQLIDEYFNRHPDAGLAWWQLPLNEQPEGFKQEMYDIMWDLTHKEDK
Ga0255062_102509534	3300024345	Rumen	GKNMSEHTIYDEMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEDSNE
Ga0255062_104621322	3300024345	Rumen	MENLYDQLINEYFNRHPDAGLAWWMLPLKEQPEGFKLEMYDIMWDLTHKETK
Ga0255062_104683332	3300024345	Rumen	MENIYDKMIDEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDILWDLTHKEAK
Ga0255059_101041171	3300024486	Rumen	MGGKNMENLYDQLIDEYFKRHPDAGLAWWMLPVEEQPDGFKQEMYDIMWDLTHKENE
Ga0255059_102512522	3300024486	Rumen	MSEHTIYDDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKQEMYDIIWDLTHREDK
Ga0256869_12809522	3300026526	Rumen	MSEQKYDKKQVWDDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKMEMYDILWDLTHKEDSN
Ga0256405_1000334433	3300028048	Rumen	MSEQKYDKKQVWDDMIDEYFNRHPDAGLAWWMLPVEQQPEGFKMEMYDILWDLIHKEDSN
Ga0302048_12535331	3300028555	Fungi-Associated Bovine Rumen	DKYMYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKDE
Ga0247611_1000194139	3300028591	Rumen	MENFYDKLIEEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHREEANG
Ga0247611_100142517	3300028591	Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWHLTHKEEEND
Ga0247611_100160264	3300028591	Rumen	MSEQRTIYDDMINEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDILWDLTHKEDSNE
Ga0247611_100788705	3300028591	Rumen	MENIYNKMIEEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKENK
Ga0247611_101246467	3300028591	Rumen	MEGVKKMSKRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWDLTHKEDKDE
Ga0247611_101483463	3300028591	Rumen	MENLYDQLIDEYFKRHPDAGLAWWMLPLEEQPEGFKQEMYDILWDLTHKEEPNE
Ga0247611_101765412	3300028591	Rumen	MENLYDQMIDEYFRRHPDAGLAWWMLPLGEQPEGFKQEMYDIMWDLTHKD
Ga0247611_103136252	3300028591	Rumen	MENIYDKMIDEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDILWDLTHKEEAND
Ga0247611_105264993	3300028591	Rumen	MENFYDQLIDEYFNRHPDAGLAWWQLPLNEQPEGFKQEMYDIMWDLTHKEDKE
Ga0247611_107304361	3300028591	Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEAK
Ga0247611_108801241	3300028591	Rumen	MPEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWDLTHKENKDE
Ga0247608_10000152179	3300028805	Rumen	MENLYDQLIDEYFKRHPDAGLAWWMLPVEEQPDGFKQEMYDIMWDLTHKENE
Ga0247608_1000094237	3300028805	Rumen	MGGINMENFYNQLIDEYFKRHPDAGLAWWMLPVEEQPDWFKQEMYDIMWDLTHKENKDE
Ga0247608_100170518	3300028805	Rumen	MYDKEQVWEDMIVEYFNRHPDAGLAWWMLPLKDQPEGFKLEMYDIIWDLTHKENKDE
Ga0247608_104410413	3300028805	Rumen	MENKVTFREFWDIMIEEYFNRHPDAGLAWWMLPVEEQPEGFKQEMYDILWDLTHGEDKDESL
Ga0247608_107269052	3300028805	Rumen	MENLYNQLIDEYFNRHPDAGLAWWMLPPEQQPEGFKLEMYDILWDLTHKEDKDE
Ga0247608_107676742	3300028805	Rumen	MPKHTIYEDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEEKND
Ga0247610_1000004569	3300028833	Rumen	MENFYDKLIDEYFKRHPDAGLAWWMLPLEEQPEGFKQEMYDIMWDLTHKENE
Ga0247610_100148563	3300028833	Rumen	MKNFYDQLIDEYFNRHPDAGLAWWQLPLNEQPEGFKQEMYDIMWDLTHKEDK
Ga0247610_100969053	3300028833	Rumen	MSYNKEQIWDDMIEEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYDILWDLTHKEDSNE
Ga0247610_101004611	3300028833	Rumen	DIGGFYMSEQRTMYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKEN
Ga0247610_101407453	3300028833	Rumen	MPEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWDLTHKEDKDE
Ga0247610_103913783	3300028833	Rumen	MSEQRTIYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIIWHLTHKEEKND
Ga0247610_104918643	3300028833	Rumen	MENRVTFREFWDIMIEEYFNRHPDAGLAWWMLPVEEQPEGFKQEMYDILWDLTHREE
Ga0247610_105857504	3300028833	Rumen	MSEQRTMYDDMIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDLTHKENK
Ga0247610_113041042	3300028833	Rumen	MEVQIMENLYDQLIDEYFRRHPDAGLAWWMLPLEEQPEGFKQEMYDIMWDLTHKEAK
Ga0247610_120867662	3300028833	Rumen	MKNFYDQLIDEYFNRHPDAGLAWWMLPLEEQPEGFKQEMYDIMWDLTHKEEANG
Ga0247609_1000013920	3300028888	Rumen	MEVQIMENLYGQLIDEYFKRHPDAGLAWWMLPLEEQPEGFKLEMYDIMWDLTHKEETNG
Ga0247609_101633915	3300028888	Rumen	LMIEEYFKRHPDAGLAWWMLPLDQQPEGFKQEMYNILWDLTHKEETND
Ga0247609_104660332	3300028888	Rumen	MSEQHTIYDDMINEYFNRHPDAGLAWWMLPLKDQPEGFKLEMYDILWDLTHKEDK
Ga0247609_108680323	3300028888	Rumen	MENFYNKLIDEYFRRHPDAGLAWWMLPLEQQPEGFKLEMYDIMWDLTHKEETK
Ga0247609_110982502	3300028888	Rumen	MEHLYDKMIEEYFKRHPDAGLAWWMLPLEQQPEGFKQEMYDILWDMTHKEEEQGK
Ga0247609_112432292	3300028888	Rumen	MEVQIMENLYNQLIDEYFRRHPDAGLAWWMLPLKEQPEGFKLEMYDIMWDLTHKEEKNG
Ga0247609_122047572	3300028888	Rumen	MENFYDKLIDEYFKRHPDAGLAWWMLPLEEQPEGFKLEMYDIMWDLTHKEETNG
Ga0061013_124563462	3300030772	Fungi-Associated Bovine Rumen	MYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKDE
Ga0061013_124891462	3300030772	Fungi-Associated Bovine Rumen	MSEKKSITWDDIIDEYFNRHPDAGLAWWDLPLEDQPEEFKAMMYDIIWSLLKEDK
Ga0061013_124956812	3300030772	Fungi-Associated Bovine Rumen	MRYFYDKLIEEYFNRHPEAGMAWWMLPLEQQPEGFKQEMYDIMWDLTHKEEVND
Ga0061011_114228511	3300030915	Fungi-Associated Bovine Rumen	EDKYMYDKKQVWEDMITEYFNRHPDAGLAWWMLPLEEQPEGFKLEMYDIIWDLTHKEDKD
Ga0326513_1000553112	3300031760	Rumen	MKNIYDEMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYNILWDLTHKEE
Ga0326513_100899082	3300031760	Rumen	MENRKSLHPTLQVMIDEYFRRHPDAGLAWWDLPVEQQPEGFKIEMYDILWDLMHKEETNE
Ga0326513_109988583	3300031760	Rumen	MNQLWKNMINEYFNRHPDAGLAWWMLPLEEQPEGFKIEMYNILWDLTHKEDSNE
Ga0326514_100595995	3300031853	Rumen	MKNLYDQLIDEYFKRHPDAGLAWWMLPVEEQPEGFKQEMYDIMWDLTHKEEANG
Ga0326514_101481932	3300031853	Rumen	MKNFYDQLIDEYFKRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKEEANG
Ga0326511_102195722	3300031867	Rumen	MKDLYDKMIDEYFNRHPDAGLAWWMLPLEQQPEGFKLEMYDILWDLTHKEE
Ga0310694_109348693	3300031992	Rumen	KLIDEYFNRHPDAGLAWWMLPLEQQPEGFKQEMYDIMWDLTHKEQNADVQ
Ga0310691_101090804	3300031994	Rumen	MKEYSQLWEDMITEYFNRHPEAGLALWQLPIEEQPEGFKKEMYDIFWTLTYKKAEGE
Ga0310786_113095572	3300031998	Rumen	MENLYDQLIDEYFRRHPDAGLAWWQLPLEEQPEGFKQEMYDIMWDLTHKNSK
Ga0310697_106378982	3300032030	Rumen	MENKVTFREFWDIMIEEYFNRHPDAGLAWWMLPVEEQPEGFKQEMYDILWDLTHREDKDE
Ga0326512_10000009153	3300032038	Rumen	MKNIYDEMIDEYFNRHPDAGLAWWMLPVEQQPEGFKLEMYNILWDLTHKENK
Ga0326512_100051988	3300032038	Rumen	MENFYNKLIDEYFRRHPDAGLAWWMLPLNEQPEGFKQEMYDIMWDLTHKENE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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Geographical Distribution

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