Metagenome / Metatranscriptome Family F072772

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	63 residues
Representative Sequence	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC
Number of Associated Samples	94
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.30 %
% of genes near scaffold ends (potentially truncated)	29.75 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.207 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.223 % of family members)
Environment Ontology (ENVO)	Unclassified (25.620 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.240 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.78% β-sheet: 17.78% Coil/Unstructured: 54.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07264	EI24	3.31
PF08281	Sigma70_r4_2	3.31
PF01019	G_glu_transpept	1.65
PF05433	Rick_17kDa_Anti	0.83
PF13537	GATase_7	0.83
PF09849	DUF2076	0.83
PF01068	DNA_ligase_A_M	0.83
PF00753	Lactamase_B	0.83
PF08450	SGL	0.83
PF00111	Fer2	0.83
PF14559	TPR_19	0.83
PF02586	SRAP	0.83
PF00230	MIP	0.83
PF01556	DnaJ_C	0.83
PF13545	HTH_Crp_2	0.83
PF00892	EamA	0.83
PF04542	Sigma70_r2	0.83
PF00155	Aminotran_1_2	0.83
PF09912	DUF2141	0.83
PF11746	DUF3303	0.83
PF04657	DMT_YdcZ	0.83
PF01925	TauE	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.65
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.83
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.83
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.83
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.21 %
Unclassified	root	N/A	24.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.42 %
Unclassified	root	N/A	24.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.85 %
Unclassified	root	N/A	24.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	50.41 %
Unclassified	root	N/A	24.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.41 %
Unclassified	root	N/A	24.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.41 %
Unclassified	root	N/A	24.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.83 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.41 %
Unclassified	root	N/A	24.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	0.83 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.41 %
Unclassified	root	N/A	24.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Paraburkholderia sp. MM5384-R2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. MM5384-R2	0.83 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12697497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300002568\|C688J35102_117769314	Not Available	505	Open in IMG/M
3300002568\|C688J35102_118326199	Not Available	549	Open in IMG/M
3300004081\|Ga0063454_101719107	Not Available	546	Open in IMG/M
3300004114\|Ga0062593_103201909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300004153\|Ga0063455_100749338	Not Available	667	Open in IMG/M
3300004631\|Ga0058899_12236904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300005175\|Ga0066673_10341136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300005179\|Ga0066684_10438108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300005187\|Ga0066675_10789464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300005353\|Ga0070669_101299525	Not Available	630	Open in IMG/M
3300005434\|Ga0070709_10164152	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300005434\|Ga0070709_10554715	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300005434\|Ga0070709_10560043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300005435\|Ga0070714_100343517	Not Available	1400	Open in IMG/M
3300005435\|Ga0070714_100982066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300005435\|Ga0070714_101466053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300005436\|Ga0070713_100231810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1679	Open in IMG/M
3300005436\|Ga0070713_100471915	Not Available	1181	Open in IMG/M
3300005436\|Ga0070713_102029377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300005458\|Ga0070681_11333532	Not Available	641	Open in IMG/M
3300005467\|Ga0070706_100678032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300005529\|Ga0070741_10198216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1958	Open in IMG/M
3300005560\|Ga0066670_10882823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300005564\|Ga0070664_102306087	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300005566\|Ga0066693_10013112	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300005569\|Ga0066705_10313443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300005575\|Ga0066702_10651077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300005598\|Ga0066706_10372599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300005610\|Ga0070763_10032301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M
3300005614\|Ga0068856_100012698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8155	Open in IMG/M
3300005614\|Ga0068856_100131312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2509	Open in IMG/M
3300005616\|Ga0068852_102444825	Not Available	543	Open in IMG/M
3300005903\|Ga0075279_10114289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300006028\|Ga0070717_10857143	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300006032\|Ga0066696_10255427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1133	Open in IMG/M
3300006046\|Ga0066652_101670088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300006163\|Ga0070715_10926631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300006173\|Ga0070716_100096748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1800	Open in IMG/M
3300006797\|Ga0066659_11262535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300006804\|Ga0079221_10754290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300006806\|Ga0079220_10073752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300006904\|Ga0075424_101530749	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300006954\|Ga0079219_10504994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300009137\|Ga0066709_103016281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300010036\|Ga0126305_10268239	Not Available	1102	Open in IMG/M
3300010039\|Ga0126309_11186067	Not Available	523	Open in IMG/M
3300010040\|Ga0126308_10525170	Not Available	802	Open in IMG/M
3300010042\|Ga0126314_10260941	Not Available	1231	Open in IMG/M
3300010044\|Ga0126310_11670534	Not Available	528	Open in IMG/M
3300010045\|Ga0126311_10993026	Not Available	686	Open in IMG/M
3300010321\|Ga0134067_10265378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300010371\|Ga0134125_11558532	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300010373\|Ga0134128_10801494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1044	Open in IMG/M
3300010373\|Ga0134128_13012806	Not Available	518	Open in IMG/M
3300010396\|Ga0134126_13065353	Not Available	504	Open in IMG/M
3300011120\|Ga0150983_10977994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300011120\|Ga0150983_11135471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	965	Open in IMG/M
3300011120\|Ga0150983_13591827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300011120\|Ga0150983_14348115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300012198\|Ga0137364_10647095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300012200\|Ga0137382_11239805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300012212\|Ga0150985_100998306	Not Available	1584	Open in IMG/M
3300012212\|Ga0150985_101877449	Not Available	662	Open in IMG/M
3300012212\|Ga0150985_121339371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1319	Open in IMG/M
3300012212\|Ga0150985_121892039	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300012469\|Ga0150984_113806954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	977	Open in IMG/M
3300012469\|Ga0150984_114214515	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300012469\|Ga0150984_119914932	Not Available	1276	Open in IMG/M
3300012960\|Ga0164301_10502272	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300012960\|Ga0164301_11278214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300012984\|Ga0164309_10814202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300013296\|Ga0157374_10490138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1233	Open in IMG/M
3300014166\|Ga0134079_10727501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300014488\|Ga0182001_10291779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300014497\|Ga0182008_10092853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1489	Open in IMG/M
3300014497\|Ga0182008_10413439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300015262\|Ga0182007_10423419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300015372\|Ga0132256_103866185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300015374\|Ga0132255_103317006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300018431\|Ga0066655_10693865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300018433\|Ga0066667_10914244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300018465\|Ga0190269_10650444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300018465\|Ga0190269_12021599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300018482\|Ga0066669_10888984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300021170\|Ga0210400_10000704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35477	Open in IMG/M
3300021170\|Ga0210400_10667657	Not Available	855	Open in IMG/M
3300021362\|Ga0213882_10011337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3239	Open in IMG/M
3300021362\|Ga0213882_10108730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300021401\|Ga0210393_10046655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3404	Open in IMG/M
3300021401\|Ga0210393_11161160	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300021420\|Ga0210394_10038214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4257	Open in IMG/M
3300021445\|Ga0182009_10076853	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300021474\|Ga0210390_10661285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. MM5384-R2	873	Open in IMG/M
3300021474\|Ga0210390_11661897	Not Available	501	Open in IMG/M
3300022467\|Ga0224712_10453510	Not Available	616	Open in IMG/M
3300025898\|Ga0207692_11069281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300025906\|Ga0207699_10516800	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300025906\|Ga0207699_10640292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300025910\|Ga0207684_10393658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300025923\|Ga0207681_10476735	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300025928\|Ga0207700_10356663	Not Available	1274	Open in IMG/M
3300025928\|Ga0207700_10814617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300025929\|Ga0207664_11665530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300026078\|Ga0207702_12080790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300026316\|Ga0209155_1044114	Not Available	1757	Open in IMG/M
3300026319\|Ga0209647_1020008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4165	Open in IMG/M
3300026323\|Ga0209472_1115878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300026330\|Ga0209473_1192714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300026530\|Ga0209807_1111715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300026547\|Ga0209156_10188077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300027884\|Ga0209275_10227854	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300030499\|Ga0268259_10096413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300030990\|Ga0308178_1070797	Not Available	691	Open in IMG/M
3300031058\|Ga0308189_10407419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300031231\|Ga0170824_108108700	Not Available	941	Open in IMG/M
3300031718\|Ga0307474_11279869	Not Available	579	Open in IMG/M
3300031962\|Ga0307479_10172551	All Organisms → cellular organisms → Bacteria → Proteobacteria	2125	Open in IMG/M
3300033475\|Ga0310811_10970143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.82%
Plants	Host-Associated → Plants	18.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.44%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.65%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.24%
Loam	Environmental → Terrestrial → Soil → Loam	28.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.31%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.31%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.65%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126974971	3300000789	Soil	MKTSKEGVAIWLLDENRYAVGINHLIRYVGPLEECQRRAAILSSKGDRDLQDRALLSVVXHRSX*
C688J35102_1177693141	3300002568	Soil	MTTPKEGVAVRRLDENRYAISLDQVIRYVGSQADCERRAEILLRQNSRDVQDRALARVCRMG*
C688J35102_1183261991	3300002568	Soil	MKIRKEGVAVRRLDENRYAISLDQVIRYVGSQAECDRRAEILLRKNGRDVQD
Ga0063454_1017191071	3300004081	Soil	EGVAVRRLDENRYAISVDQVVRYVGSQAECERRAEILVQKNSRDAQDVALVRACRMC*
Ga0062593_1032019091	3300004114	Soil	MKARKEKIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKIQDEALVRACQIC*
Ga0063455_1007493382	3300004153	Soil	MKIRKEGVAVRQLDENRYAISLDQVIRYVGSQAECDRRAEILLRKNGRDVQDRALARACRIG*
Ga0058899_122369042	3300004631	Forest Soil	VAVWRLDELGYAMGVDHVIRYVGSQEECQRRAAILLPKSTRDFQDRALARASRMDR*
Ga0066673_103411362	3300005175	Soil	MKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0066684_104381082	3300005179	Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0066675_107894641	3300005187	Soil	RVMECRAFSGVCRCMKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0070669_1012995251	3300005353	Switchgrass Rhizosphere	SPKEGVAVRRLDENRYAISVDQVIRFVGSQEECERRAKILASSHTRDMQDRALARACRVCW*
Ga0070709_101641522	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MECRAFSDVCRCIKARKEGVAIWRLDEKRYAISVDQVIRYAGSQEGCQRRAEILLPKDSREEQDNTLMRACKLC*
Ga0070709_105547151	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQIC*
Ga0070709_105600432	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKCRAFPDVCRCMKARKEKIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS**
Ga0070714_1003435171	3300005435	Agricultural Soil	MKARKEKIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0070714_1009820662	3300005435	Agricultural Soil	METRKEGIAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRAL
Ga0070714_1014660531	3300005435	Agricultural Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0070713_1002318104	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKARNEGVAIWRLDERRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0070713_1004719152	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MALKEGVAVWRLDENRYAVSVDRVIRYVGSLEECQRRAAILSPKSDRNVQDQSLVRACRYAATAY*
Ga0070713_1020293771	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SRDSSMPEFKAVRRPNRVTECSLFSDVCRCMKARKEGVAIWRLDENRYAISVDHVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLR*
Ga0070681_113335321	3300005458	Corn Rhizosphere	MEIRYAMSVGQLIRYVGSQEECQRRAEMLLPKNTRDAQDHALARACRMAGLSV*KG
Ga0070706_1006780322	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPRKEGVAIWRLDEARYAVGVHHVIRYVGSLEECQRRAEILSPKNDRDVQDLGLARACRCIATAD*
Ga0070741_101982165	3300005529	Surface Soil	MKQRKEGVAVWRLDEIRYAMGVDQVVRYVGSQEECQRRAEMLLPKNNREAQDHALARACRMAGLSV*
Ga0066670_108828231	3300005560	Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAKILLPKDSRKVQDAALVRACQFC*
Ga0070664_1023060872	3300005564	Corn Rhizosphere	MKICKEGVAVRRLDENRYALSVDQVIGFVGSQEECERRAEILVPRDTREMQDRALSRACRVC*
Ga0066693_100131124	3300005566	Soil	MKARKEGVAIWQLDEKRYAISVDQVIRYVGSQEECQRRAKILLPKDSRKVQDAALVRACQFC*
Ga0066705_103134433	3300005569	Soil	MKARTEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0066702_106510772	3300005575	Soil	MECRAFSDVCRCMKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0066706_103725992	3300005598	Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0070763_100323015	3300005610	Soil	MKTQMLGVAILRLDETRYAVAVDNVVRHVGSQEECRRRAEILLPKNDRDMQDRALLRVCGV*
Ga0068856_1000126983	3300005614	Corn Rhizosphere	METRKEGIAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALSRACRVC*
Ga0068856_1001313125	3300005614	Corn Rhizosphere	MKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKIQDEALVRACQIC*
Ga0068852_1024448251	3300005616	Corn Rhizosphere	MKTRKEGVAVRRLDENRYAISVDQVIRYVGSQAECDRRAEILLRKNGRDVQDRALAGACRIG*
Ga0075279_101142892	3300005903	Rice Paddy Soil	MKTCKEGIAVRRLDDSRYAVSLDQVIRYVGSQEECERRADILSRKNTRDLQNGALARACRMS*
Ga0070717_108571432	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MALKEGVAVWRLDENRYAVSVDRVIRYVGSLEECQRRAAILSPKNDRNVQDQGLVRACRYAATAY*
Ga0066696_102554273	3300006032	Soil	MECRAFSGVCRCMKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0066652_1016700882	3300006046	Soil	MYESSEGRGRHLAAWQLDDKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0070715_109266311	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RRCIAFLECRAFSDVCRCMKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQIC*
Ga0070716_1000967484	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	METRKEGVAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALSRACRVC*
Ga0066659_112625352	3300006797	Soil	MKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKLQDEALVRACQFC*
Ga0079221_107542902	3300006804	Agricultural Soil	MECRTFSDVCRCMKAREEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0079220_100737523	3300006806	Agricultural Soil	MKTRKQGIAVRRLDETRYAMTVDQVIRYVGSQDECERRAKILRPVNSRDAQDQALVRVCGMG*
Ga0075424_1015307491	3300006904	Populus Rhizosphere	VAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKIQDEALVRACQIC*
Ga0079219_105049942	3300006954	Agricultural Soil	MECRAFPDVCRCMKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKIQDEALVRACQIC*
Ga0066709_1030162812	3300009137	Grasslands Soil	MKARKEGVAIWQLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0126305_102682391	3300010036	Serpentine Soil	MKTRKEGVAVRQFDENRYAVSLDQVIRYVGSQAECDRRAEILLRKNVRDVQDRALAWACR
Ga0126309_111860671	3300010039	Serpentine Soil	MKTRKEGIAVRRLDENRYAISLDQVIRYVGSQAECDRRAEILLRENRRDVQDGALARACRMG*
Ga0126308_105251701	3300010040	Serpentine Soil	MKTRKEGVAVWRLDENRYAISLDQVIRYVGSQAECDRRAEILLRKNGRDVQDRALARACRIG*
Ga0126314_102609412	3300010042	Serpentine Soil	MKTRKEDVAVRRLDENRYAISLDRVIRYAGSQAECDRRAEILLRKNIRDVQDRALARACRMD*
Ga0126310_116705342	3300010044	Serpentine Soil	MTTPKEGVAVRRLDGNRYAISLDQVIRYVGSQADCERRAEILLRQNSRDVQDRALARVCRMG*
Ga0126311_109930262	3300010045	Serpentine Soil	RCRSSAGIVHRCIKTRKEGIAVRRLDENRYAISVDHVVRYVGSQADCERRAEILVQKNRRDVQDGALARVCRMG*
Ga0134067_102653781	3300010321	Grasslands Soil	MNPRKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0134125_115585321	3300010371	Terrestrial Soil	TGERLWVMETRKEGVAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALSRACRVC*
Ga0134128_108014941	3300010373	Terrestrial Soil	MKARKERVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0134128_130128061	3300010373	Terrestrial Soil	MKTRKEGVAVRRLDENRYAINVDQVVRYVGSQAECERRAEILVQKNSRDAQDRALVRICRMG*
Ga0134126_130653531	3300010396	Terrestrial Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSYEECQRRAEILLSKDSRKEQDNALMRACQLC*
Ga0150983_109779942	3300011120	Forest Soil	MALKEGVAIWRLDEHRYAVGVDRVIRYVGSLEECQRRAAILSPKNDRNRQDQGLVRACRYAATAY*
Ga0150983_111354712	3300011120	Forest Soil	MKNPKEGVAIWRLDENRYAVGFDRLIRYVGSQEECQRRADILSTKGERDTQDRSLAHACYFAC*
Ga0150983_135918272	3300011120	Forest Soil	MKQRKEGVAVWRLDELGYAMGVDHVIRYVGSQEECQRRAAILFPTNTRDFQDRALARASRMDR*
Ga0150983_143481151	3300011120	Forest Soil	RAFTIMKTPKEGVAIWRLDENRYAVSIDRLIRYVGSQEECQRRADILSPKGNRDMQDRSLAHACYR*
Ga0137364_106470952	3300012198	Vadose Zone Soil	MKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC*
Ga0137382_112398052	3300012200	Vadose Zone Soil	MRARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC*
Ga0150985_1009983062	3300012212	Avena Fatua Rhizosphere	VPGFAKHNIAKTRKEGAAVRRLDENRYAISVDQVVRYVGSQAECERRAEIHLRQNSRDVQDRALARVCRMC*
Ga0150985_1018774491	3300012212	Avena Fatua Rhizosphere	MNIRKEGVAVRQLDENRYAISLDQVIRYVGSQAECDRRAEILLRKNGRDVQDRALARACRIS*
Ga0150985_1213393711	3300012212	Avena Fatua Rhizosphere	MTTPKEGVAVRRLDENRYAISLDQVIRYVGSQADCERRAEILLRQNSRDMQDRALARVCRMG*
Ga0150985_1218920391	3300012212	Avena Fatua Rhizosphere	KEGVAVRRLDENRYAISVDQVVRYVGSQAECERRAEILVQKNSREAQDVALVRACRMC*
Ga0150984_1138069542	3300012469	Avena Fatua Rhizosphere	LFRSGVAVRRLDENRYAISLDQVIRYVGSQVDCERRAEILLRQNSRDVQDRALARVCRMG
Ga0150984_1142145152	3300012469	Avena Fatua Rhizosphere	GVAVRRLDENRYAISVDQVVRYVGSQAECERRAEILVQKNSRDAQDVALVRACRMC*
Ga0150984_1199149322	3300012469	Avena Fatua Rhizosphere	MKIRKEGVAVRQLDENRYAISLDQVIRYVGSQAECDRGAEILLRKNGRDVQDRALARACRIG*
Ga0164301_105022721	3300012960	Soil	GVAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALPRACRVC*
Ga0164301_112782142	3300012960	Soil	EGVAIWRLDERRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0164309_108142022	3300012984	Soil	METRKEGIAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALPRACRVC*
Ga0157374_104901381	3300013296	Miscanthus Rhizosphere	MKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDKALVRACQIC*
Ga0134079_107275012	3300014166	Grasslands Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQFC*
Ga0182001_102917792	3300014488	Soil	MKICKEGVAVRRLDKNRYAMSVDQVIRYVGSQEECERRAAILLPKNSRDMQDRALARVCQMG*
Ga0182008_100928533	3300014497	Rhizosphere	MKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDNALMRACQLC*
Ga0182008_104134392	3300014497	Rhizosphere	MKICKEEGVAVRRLDENRYAMSVDQVIRYVGSQEECERRAAILLPKNSRDMQDRALARVCRMG*
Ga0182007_104234191	3300015262	Rhizosphere	MKICKEGVAVRRLDEHRYAMSVDQVIRYVGSQEECERRAAILLPKNSRDMQDRALARVCQMG*
Ga0132256_1038661851	3300015372	Arabidopsis Rhizosphere	MKARKEGVAIRRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS*
Ga0132255_1033170061	3300015374	Arabidopsis Rhizosphere	MKARNEGVAIWRLDEKRYAISVDQVIRYAGSQEGCQRRAEILLPKDSREEQDNSLMRACKLC*
Ga0066655_106938652	3300018431	Grasslands Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC
Ga0066667_109142442	3300018433	Grasslands Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDSALMRACQLC
Ga0190269_106504441	3300018465	Soil	MKICKKGVAVRRLDENRYAMSVDQVIRYVGSQEECERRAAILLPKNSRDMQDRALVRVCQMG
Ga0190269_120215991	3300018465	Soil	MKICKEGVAVRRLDENRYAMSVDQVIRYVGSQEECERRAVILLPKNSRDMQDRALARVCQMG
Ga0066669_108889842	3300018482	Grasslands Soil	MKARTEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC
Ga0210400_1000070425	3300021170	Soil	MALKEGVAVWRLDENRYAVGVDRVIRYVGSLEECQRRAAILSPKSDRNVQDQGLVRACRHAATAY
Ga0210400_106676571	3300021170	Soil	MKSRKEGVAVCRLDERRYAVTIDRLVWYVGSLEECERRAKMLGSSKSNRYMQDRALVRACRW
Ga0213882_100113374	3300021362	Exposed Rock	MKTPKEGIAVWRLDENRYAMSVDQVIRYVGSQEECQRRAEILLPKNNRDMQDLALARACRMG
Ga0213882_101087303	3300021362	Exposed Rock	KEGIAIWRLDNDRYAMSVDQVIRYVGSQEECQRRAEILLPKNNRDMQDLALARACRMG
Ga0210393_100466552	3300021401	Soil	MKTRNEGIAVRRLDKNRYAVSVDQVVRYVGSQEECERRAKILVPKDNRDMQDGALVRVCRAS
Ga0210393_111611601	3300021401	Soil	MKQRKEGVAVWRLDEFRYAMGVDQVIRYVGSLQECRRRAEMLLPKDTRDAQNHAL
Ga0210394_100382144	3300021420	Soil	MKTPKEGVAIWRLDANRYAVGVNRLIRYVGSQEECQRRAEILSPRADRDMQDRAVVHACYCSR
Ga0210394_100689263	3300021420	Soil	MKNPKEGVAIWRLDENRYAVGFDRLIRYVGSQEECQRRADILSTKGERDTQDRSLAHACYFAC
Ga0210391_115623332	3300021433	Soil	MKNPKEGVAIWRLDENRYAVGFDRLIRYVGSQEECQRRADILSTKGERDTQDRSLAHACY
Ga0182009_100768534	3300021445	Soil	ARKEKIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQIC
Ga0210390_106612852	3300021474	Soil	MKQRKQGVAVWRLDEFRYAMGVDQVIRYVGSLQECRRRAEMLLPKDTRDAQNHALVRVCRMGG
Ga0210390_116618971	3300021474	Soil	LCMKQCKEGVAVWRLDELGYAMGVDHVIRYVGSQEECQSRAAILFPTNTRDFQDRALARASRMDR
Ga0224712_104535103	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	RKEGVAVWRLDGIRYAMSVDQVIRFVGSEEDCQRRAAMLVPKNTRAIQDHALARACRMAASF
Ga0207692_110692811	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQLC
Ga0207699_105168003	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALPRACRVC
Ga0207699_106402923	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RKEKIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQFS
Ga0207684_103936584	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRPRKEGVAIWRLDEARYAVGVHHVIRYVGSLEECQRRAEILSPKNDRDVQDLGLARACRCIATAD
Ga0207681_104767351	3300025923	Switchgrass Rhizosphere	KSPKEGVAVRRLDENRYAISVDQVIRFVGSQEECERRAKILASSHTRDMQDRALARACRVCW
Ga0207700_103566633	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MALKEGVAVWRLDENRYAVSVDRVIRYVGSLEECQRRAAILSPKSDRNVQDQSLVRACRYAATAY
Ga0207700_108146172	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	METRKEGVAVRRLDENRYALSVDQVIRFVGSQEECERRAEILVPRDTREMQDRALPRACR
Ga0207664_116655301	3300025929	Agricultural Soil	FSDVCRCMKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQIC
Ga0207702_120807901	3300026078	Corn Rhizosphere	WRLDERRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQIS
Ga0209155_10441142	3300026316	Soil	MKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC
Ga0209647_10200085	3300026319	Grasslands Soil	MKTSKGVAIWRLDDSRYAVAVDHVVRYVGSQEECQRRAEILLPKGDRDMQDRALLRACGA
Ga0209472_11158783	3300026323	Soil	MECRAFSGVCRCMKARKEGIAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQFC
Ga0209473_11927142	3300026330	Soil	MECRAFSGVCRCMKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC
Ga0209807_11117151	3300026530	Soil	KSCRATIYRVMECRAFSDVCRCMKARTEAVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALMRACQLC
Ga0209156_101880772	3300026547	Soil	MKARKEGVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKEQDNALTRACQLC
Ga0209275_102278541	3300027884	Soil	MKTQMLGVAILRLDETRYAVAVDNVVRHVGSQEECRRRAEILLPKNDRDMQDRALLRVCG
Ga0268259_100964132	3300030499	Agave	MKICKEGVAVRRLDEHRYAMSVDQVIRYVGSQEECERRAAILLPKNSRDMQDRALARVCQMG
Ga0308178_10707972	3300030990	Soil	MTTRKEGVAVRRLDENRHAISLDQVIRYVGSQAECDRRAEILLRENRRDVQDGALARACRMG
Ga0308189_104074191	3300031058	Soil	AIWRLDEKRYAISVDQVIRYVGSQEECERRAEILLPKDSRKEQDNALMRACQLC
Ga0170824_1081087003	3300031231	Forest Soil	MALKEGVAIWRLDEHRYAVGVDRVIRYVGSLEECQCRAAILSPKNDRNRQDQGLVRACRYAATAY
Ga0307474_112798692	3300031718	Hardwood Forest Soil	MKTRKLGVAILRLDETRYAVAVDNVVRHVGSQEECRRRAEILLPKNDRDMQDRALLRVCG
Ga0307479_101725512	3300031962	Hardwood Forest Soil	MKTSKGIAIWRLDDNRYAVAVDHVVRYVGSQEECQRRAEILLPKGDRDMQDRALLRACGV
Ga0310811_109701431	3300033475	Soil	FLECRAFSDVCRCMKARKEKVAIWRLDEKRYAISVDQVIRYVGSQEECQRRAEILLPKDSRKVQDEALVRACQIC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences