NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F072652

Metagenome Family F072652

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072652
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 102 residues
Representative Sequence MTTAEGNGIKKYVAVYLCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS
Number of Associated Samples 81
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.78 %
% of genes near scaffold ends (potentially truncated) 16.53 %
% of genes from short scaffolds (< 2000 bps) 55.37 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.521 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds
(16.529 % of family members)
Environment Ontology (ENVO) Unclassified
(17.355 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.975 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.
1JGI25617J43924_100748111
2JGI25617J43924_101494831
3Ga0062385_102358262
4Ga0062387_1000450074
5Ga0062386_1002295651
6Ga0062386_1004511312
7Ga0062386_1009706241
8Ga0062386_1014044911
9Ga0070713_1003170752
10Ga0070713_1018061282
11Ga0070710_107225822
12Ga0070708_1000094895
13Ga0070706_1002773463
14Ga0070707_1001035594
15Ga0070730_100270883
16Ga0070730_100656333
17Ga0070733_100062829
18Ga0070733_100660532
19Ga0070733_101397723
20Ga0070733_111872982
21Ga0070732_101721832
22Ga0070732_102659761
23Ga0080027_100826332
24Ga0066789_1000003923
25Ga0066790_105370052
26Ga0075023_1006185682
27Ga0075029_1000033596
28Ga0075029_1000044877
29Ga0075029_1000212714
30Ga0075029_1000927212
31Ga0075029_1001432093
32Ga0075029_1006103042
33Ga0075017_1000782893
34Ga0075017_1000954003
35Ga0075017_1013852142
36Ga0075030_1000137278
37Ga0075030_1007277652
38Ga0070716_1013786581
39Ga0075014_1009402502
40Ga0070765_1011575931
41Ga0075520_11075753
42Ga0073928_1000005681
43Ga0073928_100128048
44Ga0073928_100203275
45Ga0073928_104510771
46Ga0102924_10156377
47Ga0099829_100086205
48Ga0099830_106977072
49Ga0099828_103640613
50Ga0099827_102826933
51Ga0074045_100158008
52Ga0136449_1016594063
53Ga0136449_1025110321
54Ga0150983_132942881
55Ga0137391_101121832
56Ga0137391_104928641
57Ga0137393_114879002
58Ga0120139_10354312
59Ga0137388_117595181
60Ga0137383_100459514
61Ga0137381_100440385
62Ga0137378_100080017
63Ga0137378_101097542
64Ga0137387_105931601
65Ga0120123_10782152
66Ga0120132_10002418
67Ga0182024_100005827
68Ga0187802_104106211
69Ga0193751_10273694
70Ga0210407_100045949
71Ga0210399_1000145313
72Ga0210399_100144023
73Ga0210396_104261213
74Ga0210402_104431542
75Ga0212123_10000029141
76Ga0212123_1000236746
77Ga0212123_1000485917
78Ga0212123_100205646
79Ga0212123_104174493
80Ga0207684_104722002
81Ga0207646_110212331
82Ga0207700_114368371
83Ga0207665_109749121
84Ga0209863_100637842
85Ga0209890_100001308
86Ga0209648_100693044
87Ga0209733_10039874
88Ga0209117_10518352
89Ga0209118_10165643
90Ga0209446_10085144
91Ga0209448_100032783
92Ga0209039_100113735
93Ga0209039_102439722
94Ga0209580_100449623
95Ga0209580_102211863
96Ga0209180_100200454
97Ga0209166_100743662
98Ga0209701_101133092
99Ga0209167_100352094
100Ga0209167_100799452
101Ga0209283_103962883
102Ga0209590_108640602
103Ga0209067_100505153
104Ga0209067_107210692
105Ga0209698_1000171512
106Ga0209698_100081327
107Ga0209698_100794464
108Ga0209698_100814213
109Ga0209698_101834432
110Ga0170834_1017334391
111Ga0170834_1139694802
112Ga0170824_1247848091
113Ga0310686_1156003635
114Ga0310686_1194884093
115Ga0307474_100512621
116Ga0307477_1000014865
117Ga0307475_108048981
118Ga0307475_110647992
119Ga0307478_101086803
120Ga0307479_110257901
121Ga0311301_118759552
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.61%    β-sheet: 0.00%    Coil/Unstructured: 39.39%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MTTAEGNGIKKYVAVYLCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPSCytopl.Extracel.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
97.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Surface Soil
Peatlands Soil
Arctic Peat Soil
Permafrost
Grasslands Soil
Soil
Forest Soil
Hardwood Forest Soil
Bog Forest Soil
Soil
Prmafrost Soil
Permafrost
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
8.3%8.3%16.5%14.0%10.7%4.1%5.0%3.3%9.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25617J43924_1007481113300002914Grasslands SoilMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
JGI25617J43924_1014948313300002914Grasslands SoilMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRL
Ga0062385_1023582623300004080Bog Forest SoilMTTAEPPGIRKYVAVYLCLVVITALQFVVGYQNIEGGRMAVRMLTFGVIETILVVLFLMNLSAEKRALIKFIAYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS*
Ga0062387_10004500743300004091Bog Forest SoilMTTAESPGIGKYVAVYLCLVVITALQFVIGYQKIEGGQMAVRMLTFGVIETILVVVFLMNLSVENRALIKFISYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS*
Ga0062386_10022956513300004152Bog Forest SoilNTMTTAESPGIGKYVAVYLCLVVITVLQFVIGYQNIEGGQMAVRMLTFGVIETILVVLFLMNLSAEKQALIKFISYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS*
Ga0062386_10045113123300004152Bog Forest SoilMTTAESPGIGKYVAVYLCLVVITALQFVIGYQNIEGGQMAVRMLTFGVIETILVVLFLMNLSAEKRSLIKFISYFMLFVLATMNWIWTDSFRLLLFRLTKTGPS*
Ga0062386_10097062413300004152Bog Forest SoilMTTAEGQGIGKYVAVYLCLVVITALQFFIGYQNIEGPQMAVRMLTFGIIETILVVLFLMNLSAEKRAFIKFVALFMLFVLATMNMIWTDSFRLLIFRLTKIGPS*
Ga0062386_10140449113300004152Bog Forest SoilMATADAQGMGKNVAVYLCLLVIMTLQFFIGYQNIAGSQLVVRFFTFSVIEALLVVLFWMSLSSEKKVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRLTGTGPS*
Ga0070713_10031707523300005436Corn, Switchgrass And Miscanthus RhizosphereMTTASTSKYLIVYVCLLAIMALQFLVGYQHIAGPQLVVRFFTFAVIESLLVVLFWMNLGSEKPVFVKFIVYFMLFVLATMNYIWTDSFRLLLFRLTGMGPS*
Ga0070713_10180612823300005436Corn, Switchgrass And Miscanthus RhizosphereMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAALVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0070710_1072258223300005437Corn, Switchgrass And Miscanthus RhizosphereMATIARQGISKYLAVYVLLLAITGLQFMIAYQKVQGAAMVVRMLTIGVIEAILIVLFMMNLSSEKRTFIKFFAYFMLFVLAAMNWIWTDSFRLLVFRLTGMGPS*
Ga0070708_10000948953300005445Corn, Switchgrass And Miscanthus RhizosphereMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRFLTFAVIETILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0070706_10027734633300005467Corn, Switchgrass And Miscanthus RhizosphereMATAETQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0070707_10010355943300005468Corn, Switchgrass And Miscanthus RhizosphereMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0070730_1002708833300005537Surface SoilMATAQAQGIKKYVAVYIALVVITAFQFFIGYQNLEGGALIVRMLTFGGIETLLVVFVLMNLSTEKRTFFNFFVFFMLFVLTTMNIIWTDSFRLLVFRLTNTGPS*
Ga0070730_1006563333300005537Surface SoilMATAATPGIGKYVAVYLCLVVLMALQFFIGYQNIEGSALMVRVLTFGVIESLLVLLFWMNLGSEKPVFVKFVVFFTLFVLLTFNYGWTDSFRLLLFRLTGSGPS*
Ga0070733_1000628293300005541Surface SoilMTTAEGHGIGKYVAVYFCLLVVMALQFVIGYQNIEGSAMAVRMLTFAVIESILVVLFLMNLGSEKPVFVKFVVYFMLFVLATMNYIWTDSFRLLLFRITKIGPS*
Ga0070733_1006605323300005541Surface SoilMANAEAQGMGKYTAVYLCLLVVTALQFFIGYQSIEGPQLVIRFLTFAIIETILVVLFWMNLGSEKGVFIKYIIFTMVFVLATMNYIWTDSFRLLLFHLTKMGPS*
Ga0070733_1013977233300005541Surface SoilMGTAEGHGIGKYAAVYVALLLVMAVQFLIGYQNIEGSALVVRMLTFAVIETILVVVFFMNLGSEKPVFVKFVVYFMLFVLATMNYIWTDSFRLLLFRVTKVGPS*
Ga0070733_1118729823300005541Surface SoilMTTAEGHGIGKYVAVYLCLLVVMALQFVIGYQNIEGSQLVVRMLTFAVIETILVVLFLMNLGSEKPVFVKFVVFFMLFVLATMNYIW
Ga0070732_1017218323300005542Surface SoilMATIARQGISKYLAVYVLLLAIIALQFMIGYQNVQGAAMVVRMLTFGVIEAILVVLFMMNLSSEKRTFIKFFAYFMLFVLAAMNWIWTDSFRLLVFRLTGMGPS*
Ga0070732_1026597613300005542Surface SoilMATIARQGISKYLAVYVLLLAITGLQFMIGYQNVQGAAMVVRMLTFGIIEAILIVLFMMNLSSEKRTFVKFFAYFMLFVLAAMNWIWTDSFRLLVFRLTGMGPS*
Ga0080027_1008263323300005993Prmafrost SoilMATAEAQGMGKNIAVYLCLLVITALQFFIGYQNIAGSQLVVRFLTFAVVEALLVVLFWMSLGSEKKVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS*
Ga0066789_10000039233300005994SoilMASAEGQGQQQGIGKYAVVYVCLLVVMAVQFFIGYRNIEGSQLVVRMLTFAVIETILVVLFLMNLGSEKRVFVKFVVFFTLFVLATMNYIWTDSFRLLLFRLTGFGPS*
Ga0066790_1053700523300005995SoilMATDQTQGIGKYVVVYVCLLVVVALQFFIGYQNIAGPQLVVRMLTFAVIESILVVFFLMNLSSEKRNFFQFVAFFTLFVLAAMNYIWTDSFRLLLFRLTGFGPS*
Ga0075023_10061856823300006041WatershedsVLITAVQFVIGYQKIQGAQMAVRMLTFAVIETILVVLFFMNLNAERRTFFKFVSYFMLFVLATMNMIWTDSFRLLLFRLTKVGPS*
Ga0075029_10000335963300006052WatershedsMAAAEGQGTGKYVVVYACLLVITAAQFFIGYQHISGSQLVVRMLTFGAIETVLVVFFWMNLASEKKNLIQFIVFFTLFVLAAMNYIWTDSFRLLLFRLTGFGPS*
Ga0075029_10000448773300006052WatershedsMTTSEGSSISKYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAVIETILVVLFFMNLGSEKPLFIKFVVYFTLFVLACMNYPWTDSFRLLVFRLTGFSPS*
Ga0075029_10002127143300006052WatershedsMTTSEGPSISRYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAIIETILVVFFFMNLGTEKPSFIKFVIFFTIFVLACMNYPWTDSFRLLVFRLTGFGPS*
Ga0075029_10009272123300006052WatershedsMRTAEGQGIGKYVVVYLCLLVVTAAQFVIGYQHISGSQLAVRMLTFGVIETILVVFFWMNLASEKKNLIQFVVVFTLFVLSAMNYIWTDSFRLLLFRLTGFGPS*
Ga0075029_10014320933300006052WatershedsMATAGTRGIGKYVAVYLCLLVLMALQFVIGYRNIEGSALVVRALTFGTIETVLVVAFLMNLGSEKPLFIKFIVFFTGFVLLTINYGWTDSFRLLLFRLTGYSPS*
Ga0075029_10061030423300006052WatershedsMTTMQGQGIKKYVGIYLALVVIVALQFFIGYQNIEGGSLVVRMLTFGGIETILVVLFLMNLSTEKRSFFKFFVCFMLFVLTTMNIIWTDSFRLLMFRLTKIGPS*
Ga0075017_10007828933300006059WatershedsMATAEGSRIKKYGAVYLALLVITALQFFIGYQNIEGSSLAVRMLTFAVIDTILVVLFLMNLGFEKRLFVKFIVLFMLFVLATMNYIWTDSFRLLLFRLTGFSPS*
Ga0075017_10009540033300006059WatershedsMATAGTRGIGKYVAVYLCLLVVMALQFTIGYRNIEGSALVVRTLTFGIIETVLVVAFLMNLGSEKPLFIKFIVFFTGFVLLTINYGWTDSFRLLLFRLTGYTPS*
Ga0075017_10138521423300006059WatershedsMTTSEGPSISRYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAIIETILVVSFFMNLGTEKPSFIKFVIFFTIFVLACMNYPWTDSFRLLVFRLTGFGPS*
Ga0075030_10001372783300006162WatershedsMAAAEGQGTGKYVVVYACLLVITAAQFFIGYQHISGSQLVVRMLTFGAIETVLVVFFWMNLASEKKNLIQFIVFFTLFVLAAMNYIWTDSFRL
Ga0075030_10072776523300006162WatershedsMATAGTHGIGKYVAVYLVLLVITALQFFIGYQNIEGSALVVRMLTFAVIETILVVLFWMNLGSEKPVFIKFVVYFMLFVLAAMNYIWTDSFRLLMFRVTGFGPS*
Ga0070716_10137865813300006173Corn, Switchgrass And Miscanthus RhizosphereLLVVTALQFVIGYQNIAGSRLVVRFLTFAVIETILVVLFWMNLGSEKRVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0075014_10094025023300006174WatershedsMTTAEGSAIKKYVAVYLALLVITALQFVIGYQSIEGPQMAVRMLTFAVIETILVVLFLMNLGFEKRVFVKFVVFFMLFVLATMNYIWTDSF
Ga0070765_10115759313300006176SoilVITALQFVIGYQNIEGSQMAVRMLTFSVIETILVVLFFMNLSSEKRVFVKFIAYFMLFVLATMNYIWTDSFRLLLFRLTKVGPS*
Ga0075520_110757533300006795Arctic Peat SoilMTTTTAAGSGLKRNVGVLIGLLAVTALQFFIGYGNLKGSQLVVRFVTFAIIETILVVLFLMNLGLEKRLFVKFVAFFMLFVLFAMNYIWTDSFRLLMFRLTGNGPS*
Ga0073928_10000056813300006893Iron-Sulfur Acid SpringMATAGTRGIGKYVVVYVCLLVAVAAQFLVGFQNTGGLHLVVRILTFGAVETVLVVFFLMNLSLEKRNFLQFFVFFMLFVLAAMNYIWTDSFRLLVFRLTGFGPS*
Ga0073928_1001280483300006893Iron-Sulfur Acid SpringMATAEAQGIGRYAAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0073928_1002032753300006893Iron-Sulfur Acid SpringMATAETHGIGKYVAVYLCLVVLTALQFYIGYQNIEGSALMVRVLTFGIIESILVVVFWMNLGSEKPVFIKFVVFFTLFVLLTFNYGWTDSFRILLFRVTGFGPS*
Ga0073928_1045107713300006893Iron-Sulfur Acid SpringMATAETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFFQFVAFFMLFVLAGMSYLWTDSFRLLLFRLTGFGPS*
Ga0102924_101563773300007982Iron-Sulfur Acid SpringMATAQAQGIKKYVAVYIALVVITAFQFFIGYQNLEGGALIVRMLTFGGIETLLVVFVLMNLSTEKRTFFNFFVFFMLFVLTTMNIIWTDSFRLLVYRLTNTGPS*
Ga0099829_1000862053300009038Vadose Zone SoilMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0099830_1069770723300009088Vadose Zone SoilMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIETILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0099828_1036406133300009089Vadose Zone SoilLVITALQFVIGYQNIAGSQLVVRSLTFAVIETILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0099827_1028269333300009090Vadose Zone SoilMTTAEGNGIKKYVAVYLCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0074045_1001580083300010341Bog Forest SoilMTTAESPGIGKYVAVYLCLVVITVLQFVIGYQNIEGGQMAVRMLTFGVIETILVVLFLMNLSAEKQALIKFISYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS*
Ga0136449_10165940633300010379Peatlands SoilMTTTEESGIKKYATVYLALLVLVALQFFIGYRNIDGSQLAVRMLTFAVIETILVVLFLMNLGFEKRAFVKFIVLFMLFVLATMNYIWTDSFRLLLFRLTGFSPS*
Ga0136449_10251103213300010379Peatlands SoilNTMTTAESPGIGKYVAVYLCLVVITVLQFVIGYQNIEGGQMAVRMLTFGAIETILVVLFLMNLSAEKQALIKFISYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS*
Ga0150983_1329428813300011120Forest SoilMATAETRGIGKYVAAYLCLLVVVALQFFIGYQNIEGPRLVVRMLTFGVIETILVVLFFMNLGSEKPLFVKFIVFFTLFVLLTLNYGWTDSFRLLLFRLTGFGPS*
Ga0137391_1011218323300011270Vadose Zone SoilMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIETILVVLFWMNLGSENKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0137391_1049286413300011270Vadose Zone SoilMATAETQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0137393_1148790023300011271Vadose Zone SoilMATAEAQGMGKNVAVYLCLLVITALQIFIGYQNIAGPQLVVRFMTFAVIEALLVVLFWMNLGSEKKVFVKFIIYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS*
Ga0120139_103543123300012019PermafrostMATAEAQGIGRYTAVYFGLLVITSLQFFIGYQNIEGSHLVVRFVTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0137388_1175951813300012189Vadose Zone SoilMTAAEGQATRKYLVVYVCLLVITALQFLIGYRHIEGPQLVVRFLTFAVIETLLVVLFWMNLGSEKGVFVKFIVVTMLFVLATMNYIWTDSFRIMLFRLTGIGPS*
Ga0137383_1004595143300012199Vadose Zone SoilMTTTEATGIKKYLAVYICLLVITALQFVIGYQNIAGSQLVVRFLTFAVIESILVVLFWMDLGSENKVFVKFIAYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0137381_1004403853300012207Vadose Zone SoilMTTTEATGIKKYLAVYICLLVITALQFVIGYQNIAGSQLVVRFLTFAVIESILVVLFWMNLGSENKVFVKFIAYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0137378_1000800173300012210Vadose Zone SoilMATAEVQGLGKYAGVYLCLLVITGLQFFIGYQNIEGSHLVVRFLTFAVIETLLVVIFWMNLGSEKPVFMKFIVVTMLFVLATMNYIWTDSFRLLLFRFTGIGPS*
Ga0137378_1010975423300012210Vadose Zone SoilMTTTEATGIKKYLAVYICLLVITALQFVIGYQNIAGSQLVVRFLTFAVIESILVVLFWMELGSENKVFVKFIAYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0137387_1059316013300012349Vadose Zone SoilRPKQIRSHRMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRFLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS*
Ga0120123_107821523300013770PermafrostMATAEAQGIGRYTAVYFGLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS*
Ga0120132_100024183300013832PermafrostMTTAQGSAIKKYVIVYFCLLVVMAVQFLLGYQKIEGGQLVVRMLTFGAIDTFLVVLIFMNLSSEKRIFLVFIAATMVFVLATMNYIWTDSFRILLYRVTGMGPS*
Ga0182024_1000058273300014501PermafrostMATAETHGIGKYVAVYLCLVVLTALQFYIGYQNIEGSALMVRVLTFGIIESILVVVFWMNLGSEKPVFIKFVVFFTLFVLLTFNYSWTDSFRILLFRVTGIGPS*
Ga0187802_1041062113300017822Freshwater SedimentMTTAESPGIGKYVAVYLCLVVITALQFVIGYQNIEGGQMAVRMLTFGVIEAILVVLFLMNLSVEKRTLIKFISYFMLFVLATMNWIWTDSFRLLLFRLTKTGPS
Ga0193751_102736943300019888SoilMATAEAQGIGRYIAVYFGLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0210407_1000459493300020579SoilMATADAQSMRKNIAVYLCLLVIVALQFFIGYQNIAGSQLVVRFFTFAVIEALLVVLFWMSLGSEKKVFIRFTVYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS
Ga0210399_10001453133300020581SoilMATAETRGIGKYVAVYLCLVVLTALQFYIGYQNIEGSALMVRVLTFGIIESILVVVFWMNLGSEKPVFIKFVVFFTLFVLLTFNYGWTDSFRILLFRVTGFGPS
Ga0210399_1001440233300020581SoilMATAETRGIGKYVAAYLCLLVVVALQFFIGYQNIEGPRLVVRMLTFGVIETILVVLFFMNLGSEKPLFVKFIVFFTLFVLLTLNYGWTDSFRLLLFRLTGFGPS
Ga0210396_1042612133300021180SoilLVVVALQFFIGYQNIEGPRLVVRMLTFGVIETILVVLFFMNLGSEKPLFVKFIVFFTLFVLLTLNYGWTDSFRLLLFRLTGFGPS
Ga0210402_1044315423300021478SoilMATANAQGMGKNIAVYLCLLVIVALQFFIGYQNIAGSQLVVRFFTFAVIEALLVVLFWMSLGSEKKVFIKFTVYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS
Ga0212123_100000291413300022557Iron-Sulfur Acid SpringMATAGTRGIGKYVVVYVCLLVAVAAQFLVGFQNTGGLHLVVRILTFGAVETVLVVFFLMNLSLEKRNFLQFFVFFMLFVLAAMNYIWTDSFRLLVFRLTGFGPS
Ga0212123_10002367463300022557Iron-Sulfur Acid SpringMATAEAQGIGRYAAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0212123_10004859173300022557Iron-Sulfur Acid SpringMATAETHGIGKYVAVYLCLVVLTALQFYIGYQNIEGSALMVRVLTFGIIESILVVVFWMNLGSEKPVFIKFVVFFTLFVLLTFNYGWTDSFRILLFRVTGFGPS
Ga0212123_1002056463300022557Iron-Sulfur Acid SpringMATAETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFFQFVAFFMLFVLAGMSYLWTDSFRLLLFRLTGFGPS
Ga0212123_1041744933300022557Iron-Sulfur Acid SpringHRPGRISDEYGALRHQNTEQNMATAQAQGIKKYVAVYIALVVITAFQFFIGYQNLEGGALIVRMLTFGGIETLLVVFVLMNLSTEKRTFFNFFVFFMLFVLTTMNIIWTDSFRLLVYRLTNTGPS
Ga0207684_1047220023300025910Corn, Switchgrass And Miscanthus RhizosphereMATAETQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0207646_1102123313300025922Corn, Switchgrass And Miscanthus RhizosphereMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGVFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0207700_1143683713300025928Corn, Switchgrass And Miscanthus RhizosphereMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAALVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0207665_1097491213300025939Corn, Switchgrass And Miscanthus RhizosphereLLVVTALQFVIGYQNIAGSRLVVRFLTFAVIETILVVLFWMNLGSEKRVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS
Ga0209863_1006378423300026281Prmafrost SoilMATAEAQGMGKNIAVYLCLLVITALQFFIGYQNIAGSQLVVRFLTFAVVEALLVVLFWMSLGSEKKVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS
Ga0209890_1000013083300026291SoilMASAEGQGQQQGIGKYAVVYVCLLVVMAVQFFIGYRNIEGSQLVVRMLTFAVIETILVVLFLMNLGSEKRVFVKFVVFFTLFVLATMNYIWTDSFRLLLFRLTGFGPS
Ga0209648_1006930443300026551Grasslands SoilMATAEAQGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0209733_100398743300027591Forest SoilMATAETHGIGKYVAVYLCLLVVVALQFIIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFFQFVAFFMLFVLAGMSYLWTDSFRLLLFRLTGFGPS
Ga0209117_105183523300027645Forest SoilMATADAQGMGKNIAVYLCLLVIMALQFFIGYQNIAGSQLVVRFFTFGVIEALLVVLFWMSLGSEKKVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRLTGMGPS
Ga0209118_101656433300027674Forest SoilMATAETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFLQFVAFFMLFVLAGMSYLWTDSFRLLLFRLTGFGPS
Ga0209446_100851443300027698Bog Forest SoilMTTAEPPGIRKYVAVYLCLVVITALQFVVGYQNIEGGRMAVRMLTFGVIETILVVLFLMNLSAEKRALIKFIAYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS
Ga0209448_1000327833300027783Bog Forest SoilMTTAESPGIGKYVAVYLCLVVITALQFVIGYQKIEGGQMAVRMLTFGVIQTILVVVFLMNLSVENRALIKFISYFMLFVLAAMNWIWTDSFRLLLFRLTKTGPS
Ga0209039_1001137353300027825Bog Forest SoilMATAEGHGIGKYVAVYLCLLVVMALQFFIGYQNIAGSALVVRMLTFAVIETILVVLFWMNLGSEKPLFIKFIVFFTGFVLLTLNYGWTDSFRLLLFRLTGFGPS
Ga0209039_1024397223300027825Bog Forest SoilMTTAEGQGIGKYVAVYLCLVVITALQFFIGYQNIEGPQMAVRMLTFGIIETILVVLFLMNLSAEKRAFIKFVALFMLFVLATMNMIWTDSFRLLIFRLTKIGPS
Ga0209580_1004496233300027842Surface SoilMATLARQGISKYLAVYVLLLAIIALQFMIGYQNVQGAAMVVRMLTFGVIEAILVVLFMMNLSSEKRTFIKFFAYFMLFVLAAMNWIWTDSFRLLVFRLTGMGPS
Ga0209580_1022118633300027842Surface SoilMATAQAQGIKKYVAVYIALVVITAFQFFIGYQNLEGGALIVRMLTFGGIETLLVVFVLMNLSTEKRTFFNFFVFFMLFVLTTMNIIWTDSFRLLVFRLTNTGPS
Ga0209180_1002004543300027846Vadose Zone SoilMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIESILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS
Ga0209166_1007436623300027857Surface SoilMATAATPGIGKYVAVYLCLVVLMALQFFIGYQNIEGSALMVRVLTFGVIESLLVLLFWMNLGSEKPVFVKFVVFFTLFVLLTFNYGWTDSFRLLLFRLTGSGPS
Ga0209701_1011330923300027862Vadose Zone SoilMTTAEANGIKKYLAIYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIETILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS
Ga0209167_1003520943300027867Surface SoilLVVMALQFVIGYQNIEGSAMAVRMLTFAVIESILVVLFLMNLGSEKPVFVKFVVYFMLFVLATMNYIWTDSFRLLLFRITKIGPS
Ga0209167_1007994523300027867Surface SoilMANAEAQGMGKYTAVYLCLLVVTALQFFIGYQSIEGPQLVIRFLTFAIIETILVVLFWMNLGSEKGVFIKYIIFTMVFVLATMNYIWTDSFRLLLFHLTKMGPS
Ga0209283_1039628833300027875Vadose Zone SoilYVCLLVITALQFVIGYQNIAGSQLVVRSLTFAVIETILVVLFWMNLGSEKKVFVKFIVYFMLFVLATMNYIWTDSFRLLVFRLTGLGPS
Ga0209590_1086406023300027882Vadose Zone SoilGIGRYTAVYFCLLVITSLQFFIGYQNIEGSHLVVRFLTFAVIEAVLVVLFWMNLGSEKGAFVKFIIVTMLFVLATMNYIWTDSFRVLLFRLTGIGPS
Ga0209067_1005051533300027898WatershedsMATAGTRGIGKYVAVYLCLLVVMALQFTIGYRNIEGSALVVRTLTFGIIETVLVVAFLMNLGSEKPLFIKFIVFFTGFVLLTINYGWTDSFRLLLFRLTGYTPS
Ga0209067_1072106923300027898WatershedsMTTSEGPSISRYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAIIETILVVSFFMNLGTEKPSFIKFVIFFTIFVLACMNYPWTDSFRLLVFRLTGFGPS
Ga0209698_10001715123300027911WatershedsMTTSEGSSISKYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAVIETILVVLFFMNLGSEKPLFIKFVVYFTLFVLACMNYPWTDSFRLLVFRLTGFSPS
Ga0209698_1000813273300027911WatershedsMAAAEGQGTGKYVVVYACLLVITAAQFFIGYQHISGSQLVVRMLTFGAIETVLVVFFWMNLASEKKNLIQFIVFFTLFVLAAMNYIWTDSFRLLLFRLTGFGPS
Ga0209698_1007944643300027911WatershedsMATAGTRGIGKYVAVYLCLLVLMALQFVIGYRNIEGSALVVRALTFGTIETVLVVAFLMNLGSEKPLFIKFIVFFTGFVLLTINYGWTDSFRLLLFRLTGYSPS
Ga0209698_1008142133300027911WatershedsMTTSEGPSISRYAAVYVALLVIMGAQFLIGYQNISGGQLVTRFFTFAIIETILVVFFFMNLGTEKPSFIKFVIFFTIFVLACMNYPWTDSFRLLVFRLTGFGPS
Ga0209698_1018344323300027911WatershedsMRTAEGQGIGKYVVVYLCLLVVTAAQFVIGYQHISGSQLAVRMLTFGVIETILVVFFWMNLASEKKNLIQFVVVFTLFVLSAMNYIWTDSFRLLLFRLTGFGPS
Ga0170834_10173343913300031057Forest SoilMTTAEVQGIGKYAAVYLCLLLITAVQFFVGYQSIEGSHLVVRFLTFAVIETLLVVLFWMSLGSEKKVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRLTRIGPS
Ga0170834_11396948023300031057Forest SoilMTTAEGQSTGKYLAVYVCLLVITALQFFIGYQHIAGSQLVVRFFTFAVIESLLVVLFWMNLGSEKPVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRHTGMGPS
Ga0170824_12478480913300031231Forest SoilMTTASTSKYLIVYVCLLAITALQFLIGYQHIAGPQLVVRFFTFAVIESLLVVLFWMNLGSEKPVFVKFIVYFMLFVLAAMNYIWTDSFRLLLFRHTGMGPS
Ga0310686_11560036353300031708SoilMTTAEGHGIGKYLAVYLCLLVVVGVQFLIGYQNLEGSAIVVRVVTFGAIETILVVLFWMNLGSEKPMFIKFIVFFTGFVLLTINYGWTDSFRILLYRLTGVGPS
Ga0310686_11948840933300031708SoilETRGIGKYVAVYLGLVVLTALQFYIGYQNIEGSALMVRVLTFGVIESILVVVFWMNLGSEKPVFIKFVVFFTLFVLLTFNYGWTDSFRILLFRVTGFEPS
Ga0307474_1005126213300031718Hardwood Forest SoilMATAETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFFQFVAFFMLFVLACMNYVWTDSFRLLLFRLTGFGPS
Ga0307477_10000148653300031753Hardwood Forest SoilMATTETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKRNFFQFVAFFMLFVLACMNYVWTDSFRLLLFRLTGFGPS
Ga0307475_1080489813300031754Hardwood Forest SoilMTTAEKQAIRKYAAVYVCLLVTTALQFLIGYRGAEGGQLVVRMLTFAVIETLLVVLFWMNLGTEKKVFIQYVVYTMIFVLATMNYIWTDSFRVLVFRLTGLGPS
Ga0307475_1106479923300031754Hardwood Forest SoilMATLSRQGLSRYLAVYLLLLVIAALQFIVGYQNAQGAQMVVRFLTFGGIEAILMVFFMMNLGSEKPTLFKFVAYFMLFVLAAMNWIWTDSFRLLFYRVTGLGPS
Ga0307478_1010868033300031823Hardwood Forest SoilMATAETHGIGKYVAVYVCLLVVVALQFFIGYQNIEGPRLVVRMLTFAVIETILVVFYLMNLSSEKQNFFQFVAFFMLFVLACMNYVWTDSFRLLLFRLTGFGPS
Ga0307479_1102579013300031962Hardwood Forest SoilLLVITALQFLIGYRGAEGGQLVVRMLTFAVIETLLVVLFWMNLGSEKKVFIQYVVYTMIFVLATMNYIWTDSFRVLVFRLTGLGPS
Ga0311301_1187595523300032160Peatlands SoilMTTTEESGIKKYATVYLALLVLVALQFFIGYRNIEGSQLAVRMLTFAVIETILVVLFLMNLGFEKRAFVKFIVLFMLFVLATMNYIWTDSFRLLLFRLTGFSPS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.