Metagenome Family F072615

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072615
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	93 residues
Representative Sequence	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRT
Number of Associated Samples	101
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	95.87 %
% of genes from short scaffolds (< 2000 bps)	95.04 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.851 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.10% β-sheet: 0.00% Coil/Unstructured: 37.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07969	Amidohydro_3	93.39
PF13620	CarboxypepD_reg	2.48
PF16933	PelG	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	77.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	77.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	55.37 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	14.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	55.37 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	14.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	55.37 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	14.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	55.37 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	14.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	55.37 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	14.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104751858	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300004153\|Ga0063455_101587027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300005093\|Ga0062594_100998614	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005093\|Ga0062594_102159115	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005293\|Ga0065715_10393104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	891	Open in IMG/M
3300005293\|Ga0065715_10929441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	566	Open in IMG/M
3300005328\|Ga0070676_10743134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	720	Open in IMG/M
3300005329\|Ga0070683_100164247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2107	Open in IMG/M
3300005333\|Ga0070677_10620867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	601	Open in IMG/M
3300005335\|Ga0070666_11114337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	587	Open in IMG/M
3300005337\|Ga0070682_101671606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300005337\|Ga0070682_101802756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	534	Open in IMG/M
3300005337\|Ga0070682_101833115	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300005355\|Ga0070671_100702817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300005356\|Ga0070674_101086521	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005364\|Ga0070673_100976703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	788	Open in IMG/M
3300005365\|Ga0070688_101698632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300005435\|Ga0070714_100119957	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300005439\|Ga0070711_100179115	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300005457\|Ga0070662_101100038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	682	Open in IMG/M
3300005535\|Ga0070684_100107376	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300005543\|Ga0070672_101824833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300005544\|Ga0070686_100347892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1113	Open in IMG/M
3300005563\|Ga0068855_100390152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1527	Open in IMG/M
3300005607\|Ga0070740_10055770	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300005614\|Ga0068856_101855872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300005618\|Ga0068864_102172791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300005618\|Ga0068864_102329777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	542	Open in IMG/M
3300005719\|Ga0068861_102376649	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005844\|Ga0068862_101175213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300006058\|Ga0075432_10472244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300006175\|Ga0070712_100136194	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300006237\|Ga0097621_101692683	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006854\|Ga0075425_102361540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300009012\|Ga0066710_104065302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	547	Open in IMG/M
3300009100\|Ga0075418_12731144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	539	Open in IMG/M
3300009101\|Ga0105247_10467937	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009148\|Ga0105243_10982977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	845	Open in IMG/M
3300009156\|Ga0111538_12721908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	620	Open in IMG/M
3300009174\|Ga0105241_10819690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300009177\|Ga0105248_11449472	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300010042\|Ga0126314_10641137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300010043\|Ga0126380_10922719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300010046\|Ga0126384_11976705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300010358\|Ga0126370_11044010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300010358\|Ga0126370_11611502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	621	Open in IMG/M
3300010362\|Ga0126377_11750502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300010371\|Ga0134125_12321792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300010375\|Ga0105239_11453546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300010399\|Ga0134127_11274926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300010399\|Ga0134127_12516108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	594	Open in IMG/M
3300010399\|Ga0134127_13630299	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300010401\|Ga0134121_12452369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300012212\|Ga0150985_115570636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	723	Open in IMG/M
3300012517\|Ga0157354_1067467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300012893\|Ga0157284_10338550	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012914\|Ga0157297_10421131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300012955\|Ga0164298_11177247	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012971\|Ga0126369_11677404	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012985\|Ga0164308_11675873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	589	Open in IMG/M
3300013105\|Ga0157369_11369235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300013296\|Ga0157374_11851438	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300013296\|Ga0157374_12088233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	593	Open in IMG/M
3300013307\|Ga0157372_10619427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1261	Open in IMG/M
3300014326\|Ga0157380_12093224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300015200\|Ga0173480_10518607	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300015200\|Ga0173480_10726486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300015372\|Ga0132256_101122286	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300015372\|Ga0132256_103002737	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300017792\|Ga0163161_11789677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	546	Open in IMG/M
3300017936\|Ga0187821_10117313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	989	Open in IMG/M
3300017936\|Ga0187821_10265066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300017974\|Ga0187777_11404992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300021445\|Ga0182009_10843401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300022756\|Ga0222622_10492477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	875	Open in IMG/M
3300024283\|Ga0247670_1053426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	729	Open in IMG/M
3300025911\|Ga0207654_10310436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1075	Open in IMG/M
3300025911\|Ga0207654_10996775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	609	Open in IMG/M
3300025912\|Ga0207707_10902827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	730	Open in IMG/M
3300025914\|Ga0207671_10686658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	814	Open in IMG/M
3300025915\|Ga0207693_10101583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2255	Open in IMG/M
3300025917\|Ga0207660_11589341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300025920\|Ga0207649_10397965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1030	Open in IMG/M
3300025920\|Ga0207649_10622050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	832	Open in IMG/M
3300025929\|Ga0207664_11574587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300025931\|Ga0207644_10646708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	880	Open in IMG/M
3300025933\|Ga0207706_10972190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300025937\|Ga0207669_10699772	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300025941\|Ga0207711_10253979	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300025944\|Ga0207661_10871791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	829	Open in IMG/M
3300025945\|Ga0207679_10160152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1842	Open in IMG/M
3300025945\|Ga0207679_11127183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300025945\|Ga0207679_11484217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	622	Open in IMG/M
3300025949\|Ga0207667_10277597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1712	Open in IMG/M
3300025960\|Ga0207651_10407619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1158	Open in IMG/M
3300026116\|Ga0207674_11273904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300026121\|Ga0207683_11206235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	701	Open in IMG/M
3300027706\|Ga0209581_1061064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1415	Open in IMG/M
3300027773\|Ga0209810_1388566	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300028381\|Ga0268264_10292900	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300031057\|Ga0170834_106264684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300031231\|Ga0170824_110270499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300031231\|Ga0170824_122503205	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031716\|Ga0310813_11011992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	758	Open in IMG/M
3300031768\|Ga0318509_10570246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300031938\|Ga0308175_101108780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300031938\|Ga0308175_101631796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300031938\|Ga0308175_101898805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300031939\|Ga0308174_11631338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300031941\|Ga0310912_10800876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300031996\|Ga0308176_10526695	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1204	Open in IMG/M
3300032009\|Ga0318563_10674024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300032074\|Ga0308173_10056962	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300033412\|Ga0310810_11213846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	609	Open in IMG/M
3300033412\|Ga0310810_11391224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300033433\|Ga0326726_12398726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300033475\|Ga0310811_10975881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300034090\|Ga0326723_0076092	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1437	Open in IMG/M
3300034149\|Ga0364929_0312629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	539	Open in IMG/M
3300034268\|Ga0372943_0609283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.02%
Host-Associated	Host-Associated	42.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	42.98%
Aquatic	Environmental → Aquatic	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.57%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Peat	Environmental → Terrestrial → Peat	1.65%
Sediment	Environmental → Aquatic → Sediment	0.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1047518582	3300000364	Soil	MVPPIAGLGPAQDAIDQRHAWLTPDRLTRVRAILFGLTLFFGLAVYVFHTLGVARSASPLLITKLRGVGLLTWIYALMQMADM
Ga0063455_1015870271	3300004153	Soil	MVPMPPQLTEFGPADTVAGRYPWLTPDRLTRVRAVLLGLSLFFGLVVYVFHTVNAGRDMSPVFVAKLRGVGVLTWIYALVQMIDLRFYN
Ga0062594_1009986141	3300005093	Soil	MVPPIVGLGPATNSIDGRHRWLTPERLTRVRAILLAVSLFFGLAVYVFHTLGVAPVQPLLITKLRGVGLLTWIYALVQMIDLR
Ga0062594_1021591151	3300005093	Soil	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVL
Ga0065715_103931041	3300005293	Miscanthus Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRNSSNIPD
Ga0065715_109294411	3300005293	Miscanthus Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAPPELVKKLRGVGMLTWIYALVQLV
Ga0070676_107431342	3300005328	Miscanthus Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRN
Ga0070683_1001642471	3300005329	Corn Rhizosphere	MVSLPPQLTEFGPSDTVVGRYPWLTPERLTRVRAILLALSLFLGLVVYVFHTVSTARNATPVLIHKLRGVGVLTWIYALVQMVDLRFYNSRWAKR
Ga0070677_106208671	3300005333	Miscanthus Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRW
Ga0070666_111143372	3300005335	Switchgrass Rhizosphere	MVPPIAELGPPSRAAEQRNHWLSPDRLTRVRAVLLGVSLFLGLVVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDL
Ga0070682_1016716061	3300005337	Corn Rhizosphere	MVPPIAGLGPPARAAEQRYAWMSPDRLTRVRAVLLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWMQKRRTAIGI
Ga0070682_1018027561	3300005337	Corn Rhizosphere	MVPPIAGLGPATDVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAPPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRNASNIP
Ga0070682_1018331152	3300005337	Corn Rhizosphere	MVPPVAGLGPATESIDDRHPWLTPERLTRVRAILFALTLFFGLVVYVFHTLGETRVVQPLLVRKLRGVGMLTWIYALVQMVDMRFYNSRWAQRRRAST
Ga0070671_1007028171	3300005355	Switchgrass Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRTAIGIPDS
Ga0070674_1010865211	3300005356	Miscanthus Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVG
Ga0070673_1009767032	3300005364	Switchgrass Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQ
Ga0070688_1016986322	3300005365	Switchgrass Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRT
Ga0070714_1001199573	3300005435	Agricultural Soil	MVPPIAGVGPATEALDDQTGWLSAERLVRLRAVLLGLTLFFGLVVYVFHTLGVSPLSHPDLVKKLRGVGILTWIYALVQM
Ga0070711_1001791152	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVPPVAGLGPATDAIDQRQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLGASHLAQPVMVRKLRGVGVLTWLYALVQM
Ga0070662_1011000381	3300005457	Corn Rhizosphere	MVPPIAELGPPSRAAEQRQTWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGAAHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWTQRRRTAIGIPDSLHGWLFG
Ga0070684_1001073761	3300005535	Corn Rhizosphere	MVPPIAGLGPSAGAVDARHPWLTPERLTRVRAILLALSLFLGLVVYVFHTLVAARSPQPVLVTKLRGVGLLTWLYALVQM
Ga0070672_1018248332	3300005543	Miscanthus Rhizosphere	MVPPVAGLGPATDVVDSKRRLATPQTLIRVRAILLGVSLFLGLVVYVFHTLGASHLAQPELVKKLRGVGMLTWIYALVQLIDLRFYNSRWAQRRRASTGIPDSLHGWLF
Ga0070686_1003478921	3300005544	Switchgrass Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQR
Ga0068855_1003901521	3300005563	Corn Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRF
Ga0070740_100557702	3300005607	Surface Soil	MVPLRTTEVGAPRARSAWLTAERLPRVRAILMALSLFLGLAVYVFHTITTVRNATPPLLVTKLRGVGVLTWLYALVQMIDLRFYNSRWARR
Ga0068856_1018558721	3300005614	Corn Rhizosphere	MVPPIAGLGPSADAVDARHPWLTPERLTRVRTILLALSLFLGLVVYVFHTLVAAGSPQPVLVAKLRGVGVLTWLYALVQMIDL
Ga0068864_1021727911	3300005618	Switchgrass Rhizosphere	MVPPVAELGPSTESLDERARWLTPERLTRLRTILLALTLFFGLAVYVFHTLGSSHLAQPLLIRKLRGVGVLTWIYALVQMVDLRFYNSRWARRRRESMGLPDSL
Ga0068864_1023297772	3300005618	Switchgrass Rhizosphere	MVPPVAGLGPASDVVDPKQRLATPQTLIRVRAILFGASLFLGLVVYVFHTLGASHIAHPELIKKLRGVGMLTWI
Ga0068861_1023766492	3300005719	Switchgrass Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQL
Ga0068862_1011752131	3300005844	Switchgrass Rhizosphere	MVPPIAELGPPSRAAEQRQTWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGAAHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWTQRRRTAIGI
Ga0075432_104722441	3300006058	Populus Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRN
Ga0070712_1001361942	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRW
Ga0097621_1016926831	3300006237	Miscanthus Rhizosphere	MVPPIAELGPPSRAAEQRNHWLSPDRLTRVRAVLLGVSLFLGLVVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYAL
Ga0075425_1023615401	3300006854	Populus Rhizosphere	MVPPVAGLGPATDAIDQRQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLGASHLAQPVMVRKLRGVGVLTWLYALVQMIDLRFYNSRWARRRRETTGIPDSLHG
Ga0066710_1040653021	3300009012	Grasslands Soil	MVPPIAGFGPSTDEIASQNSWLTPDRLTRVRAILLAISLFFGLAVWIFHSLGAVRSPTPVFITKLRGVGVLTWL
Ga0075418_127311441	3300009100	Populus Rhizosphere	MVPPVAGLGPAAEVVDEKQRQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLR
Ga0105247_104679372	3300009101	Switchgrass Rhizosphere	MVPPIAGLGPATDVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDL
Ga0105243_109829771	3300009148	Miscanthus Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRNASN
Ga0111538_127219081	3300009156	Populus Rhizosphere	MVPPIAELGPPSRAAEQRQTWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGAAHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWTQRRRTAIGIPDSLHGWLF
Ga0105241_108196902	3300009174	Corn Rhizosphere	MVPPIAGLGPSARANDQRYSWLSPDRLTRVRAIILGVSLFFGLAVYVFHTLGAAHLAQPILVKKLRGVGVLTWLYALVQMVDLRFYNSRWMQRR
Ga0105248_114494723	3300009177	Switchgrass Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGM
Ga0126314_106411371	3300010042	Serpentine Soil	MVPPSPPVAELGPPTESLDGRTRWLTPERLTRLRTILLALTLFFGLAVYVFHTLGSSHLAQPLLIKKLRGVGVLTWIYALVQMVDLRF
Ga0126380_109227192	3300010043	Tropical Forest Soil	MVPPVAGLGPATESIDERHPWLTPERLTRVRAILLALSLFLALVVYVFHTLGETRAVQPLFVRKLRGVGVLTWIYALVQMVDMRFYNSRWAQRRRASTRIPDSLHGWLFG
Ga0126384_119767052	3300010046	Tropical Forest Soil	MVPPVAGLGPAAESIEHRHPWLTPERLTRVRAILLALSLFLGLAVYVFHTLGETHVVQPLLVRKLRGVGVLTWIYALVQMVDMRFYNSRWAQRRRASTRI
Ga0126370_110440102	3300010358	Tropical Forest Soil	MVPPVAGLGPATESIDERHPWLTPERLTRVRAILLALSLFLALVVYVFHTLGETRAVQPLFVRKLRGVGVLTWIYALVQMVDMRFYNSRWAQ
Ga0126370_116115021	3300010358	Tropical Forest Soil	MVPPIAELGPPAEAVSDRFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGVAHLAQPTLVRKLRGLGVLTWLYALVQMVDLRFYNSRWAQRRRATMGIPDSLHGW
Ga0126377_117505022	3300010362	Tropical Forest Soil	MVPPIAELGPPAEAASDRFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQPTLVRKLRGLGVLTWLYALVQMVDLRFYNSRWAQRRR
Ga0134125_123217922	3300010371	Terrestrial Soil	MVPPRPITELGPAAPTPLDPHPWLTPERLTRVRAILLGLSLLLGLAVYIFHTISTVVNAKPELITKLRGVGVLTWLYALVQMIDLRFYNSRWARRRRS
Ga0105239_114535462	3300010375	Corn Rhizosphere	MVPPIAGLGPATDVVPQRDWLTPDRLTRVRAILLALSLLLGLAVYVFHTLGASHIAQPTLIRKLRGVGMLTWIYALVQLVDLRFYNSRWA
Ga0134127_112749261	3300010399	Terrestrial Soil	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRNSSNIPDS
Ga0134127_125161081	3300010399	Terrestrial Soil	MVPPIAGLGPSTEAIDERHRWLTPDRLTRVRAILLALSLFLGLAVYIFHTLGESRLAQPLLVTKLRGVGALTWIYALIQMIDLRFYNSRW
Ga0134127_136302992	3300010399	Terrestrial Soil	MVPPIAGLGPAEAVDDRHRWLTPERLTRVRAILLALSLFLGLAVYVFHTLSETRSAQPLLITKLRGVGVLTWLYALVQMID
Ga0134121_124523692	3300010401	Terrestrial Soil	MVPPVAGLGPAQDAIAQRRAWLTPERLTRVRAILLALTLFFGLAVYVFHTLGVAKSAPPVLITKLRGLGLLTWIYALIQMIDLRFYNSRWARRRRETTGIPDSLHGWL
Ga0150985_1155706362	3300012212	Avena Fatua Rhizosphere	MVPPVAGLGPAADVVAEKHAVLTPERLTRVRAILLGLSLFLGLAVYVFHTLGASHLAQPLLIRKLRGVGMLTWIYALVQLIDLRFYNSRWAQRRRTSTRIP
Ga0157354_10674671	3300012517	Unplanted Soil	MVPPIAGLGPATSSIDGRHRWLTPERLTRVRAILLAASLFLGLAVYVFHTLGVAPVQPLLITKLRGVGLLTWIYALVQMIDLRFYNSRWAQRRRASTGIPDSLHGW
Ga0157284_103385501	3300012893	Soil	MVPPVAGLGPAAEVVDEKQRQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYAL
Ga0157297_104211312	3300012914	Soil	MAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRTAIGIPDSLHG
Ga0164298_111772472	3300012955	Soil	MVPPIAGLGPATDVVDEKPQRLLSAAHLTRVRAILLALRLLLGLVVYVFHSLGASHMAHPELVTKLRG
Ga0126369_116774042	3300012971	Tropical Forest Soil	MVPPIAELGPPAEAVSERFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQPTLVRKLRGLGVLTWLYALGHMVDLRFYT
Ga0164308_116758731	3300012985	Soil	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGVAHLAQATLVRKLRGLGVLTWLYALVQMV
Ga0157369_113692351	3300013105	Corn Rhizosphere	MAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRTAIGI
Ga0157374_118514382	3300013296	Miscanthus Rhizosphere	MVPPIAGLGPATDVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLV
Ga0157374_120882332	3300013296	Miscanthus Rhizosphere	MVPPIAGLGPSADAVDARHPWLTPERLTRVRTILLALSLFLGLVVYVFHTLVAAGSPQPVLVAKLRGVGVLTWLYALVQMIDLRFYNSRWA
Ga0157372_106194271	3300013307	Corn Rhizosphere	MVPPIAELGPTTQHADGRYPWLSPSRLTRVRAALLAVTLFLGLVVYVFHAVGASHQADPILIKKLRGV
Ga0157380_120932242	3300014326	Switchgrass Rhizosphere	MVPPIVGLGPATSSIEGRQRWLTPERLIRVRAILLAASLFFGLAVYVFHTLGEARAVQPLLVTKLRGVGLLTWIYALIQMIDL
Ga0173480_105186072	3300015200	Soil	MVPPVAGLGPATDVVDSKRRLATPQTLIRVRAILLGVSLFLGLVVYVFHTLGASHLAQPELVKKLRGVGMLTWIY
Ga0173480_107264861	3300015200	Soil	MVPPIVGLGPATNSIDGRHRWLTPERLTRVRAILLAVSLFFGLAVYVFHTLGVARSVQPILITKLRGVGLLTWIYALVQMIDLRFYNSRWAQRRRASTGIPD
Ga0132256_1011222862	3300015372	Arabidopsis Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRF
Ga0132256_1030027371	3300015372	Arabidopsis Rhizosphere	MVPPIVGLGPATNSIDGRHRWLTPERLTRVRAILLAVSLFFGLAVYVFHTLGVAPVQPLLITKLRGVGLLTWIYALVQMIDLRFYNSR
Ga0163161_117896771	3300017792	Switchgrass Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQ
Ga0187821_101173131	3300017936	Freshwater Sediment	MVPPIAELGPPAEAVSDRFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGVAHLAQPTLVRKLRGLGVLTWLYALVQMVDLRFYNSRWAQRRRAATGIPDSLHGWLLGQMLAWFGIL
Ga0187821_102650662	3300017936	Freshwater Sediment	MVPPIAELGPPAEAVSDRYAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQPTLVRKLRGLGVLTWLYALVQMIDLRFYNSRWAQRRRAAT
Ga0187777_114049921	3300017974	Tropical Peatland	MVRPIAELGPSTEAVSERFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQPTLIRKLRGVGVLTWLYALIQMVDLRFYNSRWAQRRRIS
Ga0190274_103666912	3300018476	Soil	MVPPIVGLGPAANSIDGRHRWLTPERLTRVRAILLAASLFFGLAVYVFHTLGVARSVQPVLITKLRGVGLLTWI
Ga0182009_108434012	3300021445	Soil	MVPPIVGLGPAANSIDGRHRWLTPERLTRVRAILLAVSLFFGLAVYVFHTLGVAPVQPLLITKLRGVGLLTWIYALVQMIDLRFYNSRWAQRRRASTGI
Ga0222622_104924772	3300022756	Groundwater Sediment	MRALFSSGGLMVPPIAGLGPATEVVDEKQRLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPDLVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRNSSNIPDSLHGW
Ga0247670_10534262	3300024283	Soil	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRWARRRRAAVGIPDSLQGWLLGQML
Ga0207654_103104361	3300025911	Corn Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRTA
Ga0207654_109967751	3300025911	Corn Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRR
Ga0207707_109028271	3300025912	Corn Rhizosphere	MVPLPPQLTEFGPADAVPARYPWLTPERLTRVRAILLGLSLFFGLVVYVFHTVSTARNASPVLITKLRGVGVLTWLYALVQMIDLRFYNSRWAQ
Ga0207671_106866581	3300025914	Corn Rhizosphere	MAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRR
Ga0207693_101015832	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRWARRRRAAVGIPDSLQGWLLGQMLA
Ga0207660_115893412	3300025917	Corn Rhizosphere	MVPPQLSDVGNDGTVAGRIAGLSPDRLTRVRAILLGISLLLGLAVYVFHAVTIARHSQPDFIHKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRASTGLPD
Ga0207649_103979652	3300025920	Corn Rhizosphere	MVPPVAGLGPATDVVAERQWLTPERLTRVRAILLALSLFLGLAVYVFHTLGASHLAQPILVRKLRGVGMLTWIYALVQLIDLRFYNSRWAQRRRAS
Ga0207649_106220501	3300025920	Corn Rhizosphere	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWA
Ga0207664_115745872	3300025929	Agricultural Soil	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLFGLTLFFGLAVYVFHTIGAAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRWARRRRAAMGIPDSLQGWLLGQMLAWFGIV
Ga0207644_106467082	3300025931	Switchgrass Rhizosphere	MVPPIAGLGPATDVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQ
Ga0207706_109721902	3300025933	Corn Rhizosphere	MVPPIAELGPPSRAAEQRQTWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGAAHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWTQRRRTAIGIPDSLHGWL
Ga0207669_106997722	3300025937	Miscanthus Rhizosphere	MVPPVAGLGPATDVVDSKRRLATPQTLIRVRAILLGISLFLGLVVYVFHTLGASHLAQPELVKKLR
Ga0207711_102539791	3300025941	Switchgrass Rhizosphere	MVPPVAGLGPAAEVVDEKQQQGLLTPGRLTRVRAILLALTLLLGLVVYVFHSLGASHMAHPELVKKLRGVGMLTWIYALVQLVDLR
Ga0207661_108717911	3300025944	Corn Rhizosphere	MVPPPLTDFGPTEAVVTRHPWLTPDRLTRVRAILLAVSLFFGLAVYVFHTVSTARDASPVLISKLRGVGVLTWLYALVQLIDLRFYNSRWA
Ga0207679_101601521	3300025945	Corn Rhizosphere	MVPPIAGLGPATDVVPHRDWLTPDRLTRVRAILLALSLLLGLAVYVFHTLGASHIAQPTLIRKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRASTGIPDSLH
Ga0207679_111271831	3300025945	Corn Rhizosphere	MVPPIAGLGPSTDVVPHKSTLSPEALTRVRAILLALSLLLGLAVYIFHTLGASHIAQPTLIRKLRGVGVLTWIYALVQLIDLRFYNSRWAQRRRASTRIPD
Ga0207679_114842172	3300025945	Corn Rhizosphere	MVPPIAELGPSARAAEQRNSWLSPDRLIRVRAIMLGVSLFLGLAVYVFHTLGASHLAQPILVKKLRGVGVLTWIYALIQMIDLRFYNSRWTQRRRSAIGIPDSLHGWL
Ga0207667_102775971	3300025949	Corn Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFSNSRWAQRRRTA
Ga0207651_104076192	3300025960	Switchgrass Rhizosphere	MVPPIAELGPPSRAAEQRNHWLSPDRLTRVRAVLLGVSLFLGLVVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWMQRRRTAI
Ga0207674_112739043	3300026116	Corn Rhizosphere	MVPPIAGLGPSTDVVPQKSALTPDALTRVRAILLALSLLLGLAVYIFHTLGASHIAQPTLIRKLRGVGMLTWI
Ga0207683_112062352	3300026121	Miscanthus Rhizosphere	MVPPIAELGPPSRAAEQRNHWLSPDRLTRVRAVLLGVSLFLGLVVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWMQRRRTAWLASRRWSG
Ga0209581_10610641	3300027706	Surface Soil	MVPLRTTEVGAPRARSAWLTAERLPRVRAILMALSLFLGLAVYVFHTITTVRNATPPLLVTKLRGVGVLTWLYALVQMIDLRFYNSRWARRRRESIG
Ga0209810_13885662	3300027773	Surface Soil	MVPIRTTEVGATRARGAWLTAERLPRVRAILLALSLFLGLAVYVFHTVTTARNATPPLMITKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRQSIGIPDSLHGW
Ga0268264_102929002	3300028381	Switchgrass Rhizosphere	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMI
Ga0170834_1062646841	3300031057	Forest Soil	MVPPIAELGPSAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGVAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRWARRRRAAVG
Ga0170824_1102704991	3300031231	Forest Soil	MVPPIAELGPPAEAVSERFGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGVAHLAQATLVRKLRGLGVLTWLYALVQMVDLRFYNSRWARRRRAAVG
Ga0170824_1225032051	3300031231	Forest Soil	MVPPVAGLGPSADAIDDRHRWLTPDRLTRVRAILLALSLLFGLAVYVFHTLGESYHAPPVLIAKLRGVGVLTWL
Ga0310813_110119922	3300031716	Soil	MVPPRTASQLSPAAGAAPIDERHAWLTPDRLTRLRAILLALSLFFGLAVYVFHTVSTARDASPLLVTKLRGIGLLTWIYALVQMIDLRFYNSRWAQRRRAQTGLPDSLHGWLLGQ
Ga0318509_105702462	3300031768	Soil	MVPPIAELGPPAEAVSERFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTISAAHLAQPTLVRKLRGLGVLTWLYALVQMVDLR
Ga0308175_1011087802	3300031938	Soil	MVPLPPQLTEFGPADAVPARYPWLTPERLTRVRAILLGLSLFLGLVVYVFHTVSTARNASPVLITKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRSSTGIPDSLH
Ga0308175_1016317962	3300031938	Soil	MVPPVAGLGPATDAIDQRQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLSASHLAQPVLVRKLRGVGVLTWLYALVQMIDLRFYNSRWARRRR
Ga0308175_1018988051	3300031938	Soil	MVPPVAGLGPTEALGQRQQWLTPERLTRLRAILLALTLFFGLAVYVFHTLGSSHSAQPLLVKKLQGVGVLTWLYALVQMIDL
Ga0308174_116313381	3300031939	Soil	MVPPVAGLGPATDAIDQRQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLGASHLAQPVFVRKLRGVGVLTWLYALVQMIDLRFYNSRWARRRRESMGIPDS
Ga0310912_108008762	3300031941	Soil	MVPPIAELGPPAEAVSERFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTISAAHLAQPTLVRKLRGLGVLTWLYALVQMVDLRFYNSRWAQRRRATMGIPDSLHGWLLGQMLAWFGIL
Ga0308176_105266952	3300031996	Soil	MVPPVAGLGPATDAIDQRQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLSASHLAQPVLVRKLRGVGVLTWLYALVQMIDLRFYNSRWARRR
Ga0318563_106740242	3300032009	Soil	MVPPIAELGPPAEAVSERFAWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTISAAHLAQPTLVRKLRGLGVLTWLYALVQMVDLRFYNSRWAQRRRATMGIPDSLHG
Ga0308173_100569621	3300032074	Soil	MVPPVAGLGPASDVVDPKQRLATPQTLIRVRAILLGASLFLGLVVYVFHTLGASHIAHPELIKKLRGVGMLTWIYALVQLIDLRFYNSRWAQRRRASTGIPDSLHGWLF
Ga0310810_112138461	3300033412	Soil	MVPPIAGLGPATDVVPHRDWLTPDRLTRVRAILLALSLLLGLAVYVFHTLGASHIAQPTLIRKLRGVGMLTWIYALVQLVDLRFYNSRWAQRRRASTGIPDSLHGW
Ga0310810_113912242	3300033412	Soil	MVPPIAGLGPATEVVDEKPQRLLSAAHLTRVRAILLALSLLLGLVVYVFHSLGVSHMAHPELVKKLRGVGMLTWIYALVQLVDLRFYNSRWAQR
Ga0326726_123987262	3300033433	Peat Soil	MVPPIAELGPPAEAVSERYGWLSPDRLTRVRAVLLGLTLFFGLAVYVFHTIGAAHLAQPTLIRKLRGLGVLTWLYALFQMVDLRFYNSRWARRRRAAMGIPDSLHGWL
Ga0310811_109758811	3300033475	Soil	MVPPMAELGPPARAAEVRYPWLSPDRLTRVRAILLGVSLFLGLAVYVFHTLGASHLAQPVLVKKLRGVGVLTWLYALVQMIDLRFYNSRWAQRRRTAI
Ga0326723_0076092_2_274	3300034090	Peat Soil	MVPPVAGLGPATDAIGERQRWLTPERLTRLRGILLALTLFFGLAVYVFHTLGASHLAQPIVVQKLRGVGVLTWIYALVQMIDLRFYNSRWA
Ga0364929_0312629_1_231	3300034149	Sediment	MVPPIAGLGPAQDAIDQRHPWLTPERLTRVRAILLALTLFFGLAVYVFHTLGVARSASPLLITKLRGIGLLTWIYAL
Ga0372943_0609283_1_285	3300034268	Soil	MVPPIAGLGPANEAIGGRHDWLTPDRLTRVRGILLGLTLFVGLAVYVFHTLGALHMAPPELVKKLRGVGVLTWIYALVQMADMRFYNSRWARRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences