Metagenome / Metatranscriptome Family F072574

Basic Information
Family ID	F072574
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	101 residues
Representative Sequence	MRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Number of Associated Samples	112
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.25 %
% of genes near scaffold ends (potentially truncated)	28.93 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (74.380 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.884 % of family members)
Environment Ontology (ENVO)	Unclassified (31.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.669 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.00% β-sheet: 2.00% Coil/Unstructured: 33.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00239	Resolvase	2.48
PF01068	DNA_ligase_A_M	2.48
PF04392	ABC_sub_bind	0.83
PF13557	Phenol_MetA_deg	0.83
PF14347	DUF4399	0.83
PF13489	Methyltransf_23	0.83
PF01425	Amidase	0.83
PF05598	DUF772	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.48
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.48
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.48
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.48
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
All Organisms	root	All Organisms	25.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
cellular organisms	root	All Organisms → cellular organisms	25.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.49 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.65 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig67793	Not Available	749	Open in IMG/M
2228664022\|INPgaii200_c1171551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2966	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100707162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300004153\|Ga0063455_100477767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300005165\|Ga0066869_10117374	Not Available	548	Open in IMG/M
3300005355\|Ga0070671_101227794	Not Available	660	Open in IMG/M
3300005356\|Ga0070674_101616947	Not Available	584	Open in IMG/M
3300005441\|Ga0070700_101142154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300005457\|Ga0070662_100542359	Not Available	974	Open in IMG/M
3300005616\|Ga0068852_101339155	Not Available	738	Open in IMG/M
3300005719\|Ga0068861_100088596	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300005843\|Ga0068860_102313203	Not Available	558	Open in IMG/M
3300005844\|Ga0068862_100875379	Not Available	882	Open in IMG/M
3300006038\|Ga0075365_10424780	Not Available	938	Open in IMG/M
3300006038\|Ga0075365_10463184	Not Available	895	Open in IMG/M
3300006042\|Ga0075368_10316709	Not Available	675	Open in IMG/M
3300006046\|Ga0066652_101465435	Not Available	635	Open in IMG/M
3300006047\|Ga0075024_100440623	Not Available	671	Open in IMG/M
3300006175\|Ga0070712_101902060	Not Available	521	Open in IMG/M
3300006177\|Ga0075362_10034679	Not Available	2200	Open in IMG/M
3300006178\|Ga0075367_10713175	Not Available	638	Open in IMG/M
3300006573\|Ga0074055_11598148	Not Available	522	Open in IMG/M
3300006844\|Ga0075428_102243435	Not Available	563	Open in IMG/M
3300006846\|Ga0075430_100075212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2832	Open in IMG/M
3300006880\|Ga0075429_101587546	Not Available	569	Open in IMG/M
3300009100\|Ga0075418_10571314	Not Available	1216	Open in IMG/M
3300009143\|Ga0099792_10829860	Not Available	607	Open in IMG/M
3300009147\|Ga0114129_10150085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3190	Open in IMG/M
3300009176\|Ga0105242_11234184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300009553\|Ga0105249_12739273	Not Available	565	Open in IMG/M
3300010362\|Ga0126377_11442574	Not Available	761	Open in IMG/M
3300010375\|Ga0105239_11794247	Not Available	711	Open in IMG/M
3300010397\|Ga0134124_10815706	Not Available	933	Open in IMG/M
3300010398\|Ga0126383_11809042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300010399\|Ga0134127_11670970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300010400\|Ga0134122_10525646	Not Available	1076	Open in IMG/M
3300011119\|Ga0105246_10841221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	818	Open in IMG/M
3300012212\|Ga0150985_111213520	Not Available	994	Open in IMG/M
3300012469\|Ga0150984_100758577	Not Available	2964	Open in IMG/M
3300012924\|Ga0137413_11156653	Not Available	615	Open in IMG/M
3300012924\|Ga0137413_11274106	Not Available	589	Open in IMG/M
3300012951\|Ga0164300_10189553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300012955\|Ga0164298_10600198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	756	Open in IMG/M
3300012957\|Ga0164303_10591978	Not Available	728	Open in IMG/M
3300012958\|Ga0164299_10558946	Not Available	774	Open in IMG/M
3300012961\|Ga0164302_11005116	Not Available	650	Open in IMG/M
3300012988\|Ga0164306_11811861	Not Available	530	Open in IMG/M
3300012989\|Ga0164305_10198698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300013297\|Ga0157378_11973852	Not Available	633	Open in IMG/M
3300013308\|Ga0157375_13093737	Not Available	555	Open in IMG/M
3300014968\|Ga0157379_12438373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300015242\|Ga0137412_10789768	Not Available	698	Open in IMG/M
3300015371\|Ga0132258_11383816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1778	Open in IMG/M
3300015372\|Ga0132256_100937280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300015373\|Ga0132257_100339798	Not Available	1812	Open in IMG/M
3300015373\|Ga0132257_101373049	Not Available	899	Open in IMG/M
3300015374\|Ga0132255_102074444	Not Available	866	Open in IMG/M
3300015374\|Ga0132255_106130651	Not Available	509	Open in IMG/M
3300016294\|Ga0182041_11900259	Not Available	553	Open in IMG/M
3300017792\|Ga0163161_12036586	Not Available	511	Open in IMG/M
3300017997\|Ga0184610_1272960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	560	Open in IMG/M
3300018027\|Ga0184605_10094042	Not Available	1319	Open in IMG/M
3300018028\|Ga0184608_10083158	Not Available	1315	Open in IMG/M
3300018031\|Ga0184634_10268869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300018072\|Ga0184635_10062545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1446	Open in IMG/M
3300018073\|Ga0184624_10041956	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300018078\|Ga0184612_10423096	Not Available	666	Open in IMG/M
3300018081\|Ga0184625_10489556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300018469\|Ga0190270_10184692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1742	Open in IMG/M
3300018476\|Ga0190274_12785041	Not Available	585	Open in IMG/M
3300018481\|Ga0190271_11856314	Not Available	714	Open in IMG/M
3300021082\|Ga0210380_10378712	Not Available	647	Open in IMG/M
3300021344\|Ga0193719_10475098	Not Available	506	Open in IMG/M
3300021363\|Ga0193699_10020603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2408	Open in IMG/M
3300022195\|Ga0222625_1322509	Not Available	511	Open in IMG/M
3300022694\|Ga0222623_10240919	Not Available	699	Open in IMG/M
3300022756\|Ga0222622_10392586	Not Available	975	Open in IMG/M
3300025927\|Ga0207687_10904465	Not Available	755	Open in IMG/M
3300025931\|Ga0207644_10979117	Not Available	710	Open in IMG/M
3300025937\|Ga0207669_10223784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1383	Open in IMG/M
3300025938\|Ga0207704_10671464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	855	Open in IMG/M
3300026067\|Ga0207678_11375893	Not Available	624	Open in IMG/M
3300027909\|Ga0209382_10274540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300028707\|Ga0307291_1111085	Not Available	687	Open in IMG/M
3300028708\|Ga0307295_10190312	Not Available	579	Open in IMG/M
3300028710\|Ga0307322_10197860	Not Available	547	Open in IMG/M
3300028711\|Ga0307293_10128888	Not Available	805	Open in IMG/M
3300028714\|Ga0307309_10112976	Not Available	659	Open in IMG/M
3300028715\|Ga0307313_10244891	Not Available	557	Open in IMG/M
3300028716\|Ga0307311_10215650	Not Available	565	Open in IMG/M
3300028718\|Ga0307307_10276395	Not Available	539	Open in IMG/M
3300028719\|Ga0307301_10253035	Not Available	575	Open in IMG/M
3300028720\|Ga0307317_10155193	Not Available	769	Open in IMG/M
3300028768\|Ga0307280_10370544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300028787\|Ga0307323_10079715	Not Available	1167	Open in IMG/M
3300028793\|Ga0307299_10063878	Not Available	1363	Open in IMG/M
3300028796\|Ga0307287_10264245	Not Available	651	Open in IMG/M
3300028802\|Ga0307503_10952629	Not Available	500	Open in IMG/M
3300028809\|Ga0247824_10743164	Not Available	602	Open in IMG/M
3300028814\|Ga0307302_10324072	Not Available	759	Open in IMG/M
3300028819\|Ga0307296_10142739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300028819\|Ga0307296_10401699	Not Available	749	Open in IMG/M
3300028819\|Ga0307296_10688809	Not Available	558	Open in IMG/M
3300028828\|Ga0307312_10203049	Not Available	1273	Open in IMG/M
3300028878\|Ga0307278_10041623	Not Available	2090	Open in IMG/M
3300028885\|Ga0307304_10047264	Not Available	1581	Open in IMG/M
3300030916\|Ga0075386_11649618	Not Available	759	Open in IMG/M
3300031170\|Ga0307498_10007888	Not Available	2016	Open in IMG/M
3300031170\|Ga0307498_10063256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300031198\|Ga0307500_10311869	Not Available	503	Open in IMG/M
3300031199\|Ga0307495_10151818	Not Available	600	Open in IMG/M
3300031199\|Ga0307495_10194861	Not Available	553	Open in IMG/M
3300031226\|Ga0307497_10213294	Not Available	843	Open in IMG/M
3300031226\|Ga0307497_10346589	Not Available	695	Open in IMG/M
3300031231\|Ga0170824_116312278	Not Available	1467	Open in IMG/M
3300031446\|Ga0170820_12016734	Not Available	647	Open in IMG/M
3300031469\|Ga0170819_10646398	Not Available	1137	Open in IMG/M
3300031573\|Ga0310915_10244614	Not Available	1262	Open in IMG/M
3300031740\|Ga0307468_102217677	Not Available	532	Open in IMG/M
3300031908\|Ga0310900_11833012	Not Available	517	Open in IMG/M
3300034417\|Ga0364941_012703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	32.23%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.20%
Plants	Host-Associated → Plants	32.23%
Aquatic	Environmental → Aquatic	10.74%
Modeled	Engineered → Modeled	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.92%
Sediment	Environmental → Aquatic → Sediment	9.09%
Roots	Host-Associated → Plants → Roots	4.13%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.13%
Loam	Environmental → Terrestrial → Soil → Loam	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.13%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0793.00004540	2166559005	Simulated	VNMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
INPgaii200_11715511	2228664022	Soil	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH
INPhiseqgaiiFebDRAFT_1007071622	3300000364	Soil	KREAGICMMRWIMLCRARLAATILPARWITMIGGAFLLSLFFLVSFIAAEAWMSRQPXSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0063455_1004777671	3300004153	Soil	LDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0066869_101173741	3300005165	Soil	MMRWIMLRLDQLAPTMGVESWIIIASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0070671_1012277941	3300005355	Switchgrass Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNDKWQQELSRLRDDCMVALYKYEPTNTKYGLTGAR*
Ga0070674_1016169471	3300005356	Miscanthus Rhizosphere	MMRWIMLRLDQLAPTMGVGGWIIMAGGAFLISLCFLVSFIAADAWMSRQPMSLRSICSNVLELYESRGEITYNDKWQQELSRLRDDCMVALYKYEPTNTKYGLTGAR*
Ga0070700_1011421541	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSGERRMRWIMLRLDQLAPTMGVESRIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR*
Ga0070662_1005423592	3300005457	Corn Rhizosphere	MRWIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR*
Ga0068852_1013391551	3300005616	Corn Rhizosphere	MRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0068861_1000885963	3300005719	Switchgrass Rhizosphere	MMRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0068860_1023132031	3300005843	Switchgrass Rhizosphere	DIRMMRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLKLYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0068862_1008753792	3300005844	Switchgrass Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELRRLRNDCAVALSTKYSPTGTR*
Ga0075365_104247803	3300006038	Populus Endosphere	MMRWIMLCRAQLAATILPAGWITMVGGAFLLSLLFLVSFIAAEAWMSRQPTSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0075365_104631842	3300006038	Populus Endosphere	MRWIMLRLDQVAPTIGVEGWIIMGSGAFLISLCFLVSFIAAEAWMSRQPMSLRSICSNVLELYESRGEITSNEKWQQELSRLRDDCAVALYK*
Ga0075368_103167091	3300006042	Populus Endosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPTSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0066652_1014654352	3300006046	Soil	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0075024_1004406232	3300006047	Watersheds	MMRWTMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSIKYSPTGTR*
Ga0070712_1019020602	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMRWIMLRLDQLAPTMGVGGWIIMAGGAFLLSLCFLVSFIAADLWMSRQPISLRSICSSVLELYEGRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0075362_100346793	3300006177	Populus Endosphere	MMRWIMLCRAQLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKY
Ga0075367_107131751	3300006178	Populus Endosphere	ICMMRWIMLCRAQLAATILPAGWITMVGGAFLLSLLFLVSFIAAEAWMSRQPTSLRSICSNVLNLYRNRDEITDNERWRQELTNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0074055_115981482	3300006573	Soil	MRWIMLRLDQLAPTMGVGGWIIMGSGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLR
Ga0075428_1022434351	3300006844	Populus Rhizosphere	VAHLFVGGGDIRMLRWIMLRLDQLAPTIGVEGWIIMGSGAFLISLCFLVSFIAAEAWMSRQPMSLRSICSNVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTSTR*
Ga0075430_1000752124	3300006846	Populus Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPTSFRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0075429_1015875461	3300006880	Populus Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0075418_105713142	3300009100	Populus Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSAALYKYDPTSPTYGLTSFDSTRPH*
Ga0099792_108298601	3300009143	Vadose Zone Soil	DQLASTMGVENWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSNVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR*
Ga0114129_101500853	3300009147	Populus Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSQQPMSLRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0105242_112341841	3300009176	Miscanthus Rhizosphere	WIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0105249_127392731	3300009553	Switchgrass Rhizosphere	MRWIMLRLDQLAPTRGVESWLIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0126377_114425741	3300010362	Tropical Forest Soil	MMRWIMLCRAQLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYQNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0105239_117942472	3300010375	Corn Rhizosphere	VIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPMSLRSICSNVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYSLTGAR*
Ga0134124_108157061	3300010397	Terrestrial Soil	MRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQRISLRSICSSVLELYESRGEITDKEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0126383_118090421	3300010398	Tropical Forest Soil	LILDGRFAMQIPSSVVEVWIKMAAGAFLISLCFLVGFIAADAWMSRHPTSLQSICLNVLELYKSREEITDNEKWQQELNRLHDDCTVALHKYELTGTR*
Ga0134127_116709702	3300010399	Terrestrial Soil	VIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0134122_105256461	3300010400	Terrestrial Soil	MRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0105246_108412211	3300011119	Miscanthus Rhizosphere	RWIMLRLDQLAPTMGVGGWIIMAGGAFLISLCFLVSFIAADAWMSRQPMSLRSICSNVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPIGSARPSEWPGSWLL*
Ga0150985_1112135202	3300012212	Avena Fatua Rhizosphere	MLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0150984_1007585772	3300012469	Avena Fatua Rhizosphere	VIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR*
Ga0137413_111566531	3300012924	Vadose Zone Soil	MLRLDQLAPTMGVENWIIMASAAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0137413_112741061	3300012924	Vadose Zone Soil	MMRWIMLRLDQLAPTMGVEGWIIMGSGAFLISLCFLVSFIAADAWMSRQQMSFRGICLNVLELYESRGEITCNEKWQQELSHLRDDCAVALSARQARPNTSR*
Ga0164300_101895532	3300012951	Soil	MMRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQRISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0164298_106001982	3300012955	Soil	MRWIVLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQEELSRLRNDCAVALSTKYSPTGTR*
Ga0164303_105919781	3300012957	Soil	MMGRIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQRISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0164299_105589462	3300012958	Soil	MRWIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLKLYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0164302_110051161	3300012961	Soil	VNMLRLDQLAPTMSVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0164306_118118611	3300012988	Soil	VIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELGRLRNDCAVALSTKYSPTGTR*
Ga0164305_101986981	3300012989	Soil	MLRLDQLAPTMGVGGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYSLTATW*
Ga0157378_119738521	3300013297	Miscanthus Rhizosphere	MRWIMLRLDQLAPTMGVESWIIIASGAFLLSLCFLVSFIAADVWMSRQPISLRSICSSVQELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR*
Ga0157375_130937371	3300013308	Miscanthus Rhizosphere	MMRWIMLRLDQLAPTMGVGGWIIMASGAFLISLCFLVSFIAADAWMSRQPMSLRSICSNVLELYESRGEITYNDKWQQELSRLRDDCMVALYKYEPTNTKYGLTGAR*
Ga0157379_124383731	3300014968	Switchgrass Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR*
Ga0137412_107897681	3300015242	Vadose Zone Soil	REPALFPQHDRLRNQNVVFQRVLNGLRLDQLAPTMGVENWIIMASAAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0132258_113838161	3300015371	Arabidopsis Rhizosphere	WIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALSARQARPNTSR*
Ga0132256_1009372802	3300015372	Arabidopsis Rhizosphere	VIMLRLDQLAPAMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALSARQARPNTSR*
Ga0132257_1003397982	3300015373	Arabidopsis Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYQNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH*
Ga0132257_1013730492	3300015373	Arabidopsis Rhizosphere	MMRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYGTR*
Ga0132255_1020744441	3300015374	Arabidopsis Rhizosphere	MVRWNILRLDQFAPTISVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALSARQARPNTSR*
Ga0132255_1061306511	3300015374	Arabidopsis Rhizosphere	MMRWIMLCRAQLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPMSLRSICSNVLNLYQNRDEITDNERWRQELKNLHDDCSVALYKYDPTSSTYGLTSFDSTRPH*
Ga0182041_119002592	3300016294	Soil	GSIFDPGRRFAMRIPSSVVEGWIRMVAGAFLISLCFLVGFIAANAWMSRHPTSLQSICSNVLEVYKIRDEITDNEKWQQELNRLHDDCTVALHKYELTGTR
Ga0163161_120365861	3300017792	Switchgrass Rhizosphere	MRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0184610_12729602	3300017997	Groundwater Sediment	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADGWMSRQPMSLQSICSNVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0184605_100940424	3300018027	Groundwater Sediment	MRWIMLRLDQLASTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSNVLELYESRGEITYNEKWQQELSRLRNDCAIALSTKYSPTGTR
Ga0184608_100831581	3300018028	Groundwater Sediment	MLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0184634_102688692	3300018031	Groundwater Sediment	MRWIMLRLDQLAPTMGVGGWIIMAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0184635_100625455	3300018072	Groundwater Sediment	VGDGGTSALRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0184624_100419561	3300018073	Groundwater Sediment	MRWIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR
Ga0184612_104230962	3300018078	Groundwater Sediment	MMRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTS
Ga0184625_104895561	3300018081	Groundwater Sediment	MLRLDQLAPTMGVESWIIMASGAFLLSLCFSVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQEFSRLRNDCAVALSTKYSPTGTR
Ga0190270_101846921	3300018469	Soil	MRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR
Ga0190274_127850411	3300018476	Soil	MRWIMLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR
Ga0190271_118563141	3300018481	Soil	SLRVTLASFRKLYDLLSDRRTGLLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0210380_103787121	3300021082	Groundwater Sediment	MRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0193719_104750981	3300021344	Soil	MMRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0193699_100206031	3300021363	Soil	RSVSGVTGWITMVGGAFLISLCFLASFIAANGWMSRQPMSLQSICSNVLELYESRGEITYNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0222625_13225092	3300022195	Groundwater Sediment	VSLWATGGIRMMRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPMSLQSICSNVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTSAR
Ga0222623_102409192	3300022694	Groundwater Sediment	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0222622_103925862	3300022756	Groundwater Sediment	MLHLDQLTPAMRVEGWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0207687_109044652	3300025927	Miscanthus Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0207644_109791172	3300025931	Switchgrass Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSNVLELYESRGEITYNDKWQQELSRLRDDCMVALYKYEPTNTKYGLTGAR
Ga0207669_102237844	3300025937	Miscanthus Rhizosphere	MRWIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0207704_106714642	3300025938	Miscanthus Rhizosphere	MRWIMLRLDQLTPTMGVESWIIMASGAFLLSLCFLVSFIAADVWMSRQPISLRSICSSVQELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0207678_113758931	3300026067	Corn Rhizosphere	MLRLDQLAPTMGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0209382_102745403	3300027909	Populus Rhizosphere	MMRWIMLCRARLAATILPAGWITMVGGAFLLSLFFLVSFIAAEAWMSRQPTSFRSICSNVLNLYRNRDEITDNERWRQELKNLHDDCSVALYKYDPTSPTYGLTSFDSTRPH
Ga0307291_11110852	3300028707	Soil	MLHLDQLTPAMRVEGWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAAALSTKYSPTGTR
Ga0307295_101903121	3300028708	Soil	CLTPCVPFVCGRRGDIRMMRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307322_101978601	3300028710	Soil	GDIRMMRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307293_101288881	3300028711	Soil	MGVGGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307309_101129761	3300028714	Soil	GVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307313_102448911	3300028715	Soil	IRMMRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307311_102156501	3300028716	Soil	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTSAR
Ga0307307_102763951	3300028718	Soil	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELNRLRND
Ga0307301_102530351	3300028719	Soil	GIRMMRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307317_101551932	3300028720	Soil	MMRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307280_103705441	3300028768	Soil	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPMSLRSICSNVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGT
Ga0307323_100797152	3300028787	Soil	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRVRNDCAVALSARQARPNTSR
Ga0307299_100638782	3300028793	Soil	MRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRSEITDNEKWQQELNRLRNDCAVALSARQARPNTSR
Ga0307287_102642451	3300028796	Soil	LRWIMLRLDQLAPTMGVGGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRSEITDNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0307503_109526291	3300028802	Soil	MLHLDQLTPAMRVEGWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR
Ga0247824_107431641	3300028809	Soil	MLRWIMLRLDQLAPTIGVEGWIIMGSGAFLISLCFLVSFIAAEAWMSRQPMSLRSICSNVLELYESRGEITYNEKWQQELSRLRDDCVVALYKYEPTSTKYGLTS
Ga0307302_103240721	3300028814	Soil	PTMGVGGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSNVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTGTKYSLTGAR
Ga0307296_101427391	3300028819	Soil	IMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRVRDDCAVALSARQARPNTSR
Ga0307296_104016992	3300028819	Soil	MMRWIMLRLDQLAPTMGVEGWIIMGSGAFLISLCFLVSFIAADAWMSRQQMSFRGICLNVLELYESRGEITHNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTSTR
Ga0307296_106888091	3300028819	Soil	MMRWIMLRLDQLAPTMGVEGWIKTAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSARQA
Ga0307312_102030492	3300028828	Soil	MMRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRVRDDCAVALSARQARPNTSR
Ga0307278_100416233	3300028878	Soil	MVRWIMLRLDQLAPTMGVEGWIIMAGGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307304_100472642	3300028885	Soil	MRWIMLRLDQLAPTMGVEGWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRVRNDCAVALSARQARPNTSR
Ga0075386_116496182	3300030916	Soil	MLRLDQLAPTMGVEGWIIMASGAFLLSLCFLVSFIAADAWISRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTGAR
Ga0307498_100078883	3300031170	Soil	MLRLDQLAPAMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0307498_100632561	3300031170	Soil	MMRWIMLRLDQLAPIMGVEGWIIMGSGAFLISLCFLVSFIAADAWMSRQQMSFRGICLNVLELYESRGEITHNEKWQQELSRLR
Ga0307500_103118691	3300031198	Soil	MLRLDQLAPTMGVESWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307495_101518183	3300031199	Soil	MLRLDQLAPTMGVESWIMMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRVRNDCAV
Ga0307495_101948611	3300031199	Soil	DGGRDICMMRWIMLRLDQLAPSMGLEGWIIMGSGAFLISLCFLVSFIAAEAWMSRQPMSLRSICSNVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0307497_102132942	3300031226	Soil	MRWIMLRLDQLAPTLGVESWIIMASGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0307497_103465891	3300031226	Soil	MMRWIMLRLDQLAPTMGVEGWIIMGSGAFLISLCFLVSFIAADAWMSRQQMSFRGICLNVLELCESRGEITHNEKWQQELSRLRDDCAVALYKYEPTSTKYGLTSTR
Ga0170824_1163122782	3300031231	Forest Soil	MLRLDQLAPAMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0170820_120167341	3300031446	Forest Soil	MVRWIMLRLDQLAPTMGVESWIIMASGAFLISLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0170819_106463981	3300031469	Forest Soil	MLRLDQLAPAMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSARQARPNTSR
Ga0310915_102446142	3300031573	Soil	MRIPSSVVEGWIRMVAGAFLISLCFLVGFIAANAWMSRHPTSLQSICLNVLELYKSREEITDNEKWQQELNRLHDDCTVALHKYELTGTR
Ga0307468_1022176771	3300031740	Hardwood Forest Soil	DQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPNSLRSICSSVLELYESRGEITDNEKWQQELSRLRNDCAVALSTKYSPTGTR
Ga0310900_118330121	3300031908	Soil	MMRWIMLRLDQLAPTMGVESWIIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKY
Ga0364941_012703_32_334	3300034417	Sediment	MRWIMLRLDQLAPTMGVESWLIMAGGAFLLSLCFLVSFIAADAWMSRQPISLRSICSSVLELYESRGEITYNEKWQQEFSRLRNDCAVALSTKYSPTGTR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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