Metagenome / Metatranscriptome Family F072478

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072478
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	89 residues
Representative Sequence	MTTTINVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVIAAAGSLTRRQTAAEEEMVQQVIAGYRAAKRKRR
Number of Associated Samples	106
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.48 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.860 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (29.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (25.620 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.36% β-sheet: 13.56% Coil/Unstructured: 55.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13470	PIN_3	34.71
PF00202	Aminotran_3	4.13
PF00075	RNase_H	3.31
PF05977	MFS_3	2.48
PF02604	PhdYeFM_antitox	1.65
PF05016	ParE_toxin	1.65
PF01208	URO-D	1.65
PF01148	CTP_transf_1	0.83
PF03450	CO_deh_flav_C	0.83
PF07291	MauE	0.83
PF01510	Amidase_2	0.83
PF00465	Fe-ADH	0.83
PF08323	Glyco_transf_5	0.83
PF07726	AAA_3	0.83
PF00291	PALP	0.83
PF08240	ADH_N	0.83
PF07963	N_methyl	0.83
PF00370	FGGY_N	0.83
PF02452	PemK_toxin	0.83
PF02096	60KD_IMP	0.83
PF01850	PIN	0.83
PF05684	DUF819	0.83
PF08450	SGL	0.83
PF14849	YidC_periplas	0.83
PF00535	Glycos_transf_2	0.83
PF00027	cNMP_binding	0.83
PF07796	DUF1638	0.83
PF02771	Acyl-CoA_dh_N	0.83
PF13602	ADH_zinc_N_2	0.83
PF01546	Peptidase_M20	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.48
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	1.65
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.65
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.65
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	0.83
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.83
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.83
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.83
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.83
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.83
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83
COG5505	Uncharacterized membrane protein YjcL	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.89 %
Unclassified	root	N/A	23.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	52.07 %
Unclassified	root	N/A	23.14 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	42.98 %
Unclassified	root	N/A	23.14 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	42.98 %
Unclassified	root	N/A	23.14 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	41.32 %
Unclassified	root	N/A	23.14 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	38.02 %
Unclassified	root	N/A	23.14 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.31 %
Thermacetogenium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Butyrivibrio	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Butyrivibrio	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	38.02 %
Unclassified	root	N/A	23.14 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2.48 %
Thermacetogenium phaeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium → Thermacetogenium phaeum	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
unclassified Pedosphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera	0.83 %
Butyrivibrio fibrisolvens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Butyrivibrio → Butyrivibrio fibrisolvens	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	38.02 %
Unclassified	root	N/A	23.14 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2.48 %
Thermacetogenium phaeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium → Thermacetogenium phaeum	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Pedosphaera sp. Tous-C6FEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera → Pedosphaera sp. Tous-C6FEB	0.83 %
Butyrivibrio fibrisolvens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Butyrivibrio → Butyrivibrio fibrisolvens	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17058884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2804	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105467914	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300000789\|JGI1027J11758_12719842	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300001213\|JGIcombinedJ13530_100953704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	657	Open in IMG/M
3300001213\|JGIcombinedJ13530_108376368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1063	Open in IMG/M
3300003616\|JGI25928J51866_1037669	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300004633\|Ga0066395_10202066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Butyrivibrio → Butyrivibrio fibrisolvens	1041	Open in IMG/M
3300004768\|Ga0007762_1482227	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005180\|Ga0066685_10403670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	949	Open in IMG/M
3300005187\|Ga0066675_11120957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	587	Open in IMG/M
3300005330\|Ga0070690_100478001	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005332\|Ga0066388_108466878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium → Thermacetogenium phaeum	512	Open in IMG/M
3300005340\|Ga0070689_100776076	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005446\|Ga0066686_10775414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	640	Open in IMG/M
3300005487\|Ga0074211_120025	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005557\|Ga0066704_11047121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium → Thermacetogenium phaeum	503	Open in IMG/M
3300005558\|Ga0066698_10276826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1161	Open in IMG/M
3300005583\|Ga0049085_10001027	All Organisms → cellular organisms → Bacteria	11006	Open in IMG/M
3300005618\|Ga0068864_100386568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1327	Open in IMG/M
3300005829\|Ga0074479_10494393	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300006224\|Ga0079037_100935511	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006904\|Ga0075424_100348661	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300006904\|Ga0075424_102718625	Not Available	516	Open in IMG/M
3300007255\|Ga0099791_10575162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	550	Open in IMG/M
3300007265\|Ga0099794_10163215	Not Available	1134	Open in IMG/M
3300009012\|Ga0066710_100064952	All Organisms → cellular organisms → Bacteria	4639	Open in IMG/M
3300009012\|Ga0066710_104382317	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009012\|Ga0066710_104642185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	513	Open in IMG/M
3300009111\|Ga0115026_10739495	Not Available	763	Open in IMG/M
3300009137\|Ga0066709_103156050	Not Available	602	Open in IMG/M
3300009137\|Ga0066709_103681150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	556	Open in IMG/M
3300009518\|Ga0116128_1053440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1268	Open in IMG/M
3300009609\|Ga0105347_1323875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	652	Open in IMG/M
3300009615\|Ga0116103_1125757	Not Available	636	Open in IMG/M
3300009617\|Ga0116123_1071989	Not Available	950	Open in IMG/M
3300009617\|Ga0116123_1072343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	947	Open in IMG/M
3300009760\|Ga0116131_1108171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	826	Open in IMG/M
3300010329\|Ga0134111_10303125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	666	Open in IMG/M
3300010361\|Ga0126378_13116360	Not Available	528	Open in IMG/M
3300010391\|Ga0136847_11876833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1135	Open in IMG/M
3300010391\|Ga0136847_12709110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	793	Open in IMG/M
3300010400\|Ga0134122_12244203	Not Available	590	Open in IMG/M
3300011270\|Ga0137391_10460033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1081	Open in IMG/M
3300011271\|Ga0137393_11569714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	548	Open in IMG/M
3300011438\|Ga0137451_1170513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	686	Open in IMG/M
3300011442\|Ga0137437_1300863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	547	Open in IMG/M
3300012200\|Ga0137382_10316267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1091	Open in IMG/M
3300012200\|Ga0137382_11232901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	530	Open in IMG/M
3300012201\|Ga0137365_10724508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	727	Open in IMG/M
3300012202\|Ga0137363_10078381	All Organisms → cellular organisms → Bacteria	2454	Open in IMG/M
3300012206\|Ga0137380_11578160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	541	Open in IMG/M
3300012208\|Ga0137376_10884532	Not Available	767	Open in IMG/M
3300012211\|Ga0137377_10557824	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012212\|Ga0150985_122606410	Not Available	569	Open in IMG/M
3300012350\|Ga0137372_10804753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	674	Open in IMG/M
3300012354\|Ga0137366_10658075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	749	Open in IMG/M
3300012358\|Ga0137368_10593549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → unclassified Pedosphaera → Pedosphaera sp. Tous-C6FEB	704	Open in IMG/M
3300012362\|Ga0137361_10446461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1188	Open in IMG/M
3300012469\|Ga0150984_109139885	Not Available	531	Open in IMG/M
3300012922\|Ga0137394_10328340	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300012923\|Ga0137359_10534307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1032	Open in IMG/M
3300012944\|Ga0137410_10615657	Not Available	898	Open in IMG/M
3300013088\|Ga0163200_1209616	Not Available	606	Open in IMG/M
3300014159\|Ga0181530_10168543	Not Available	1232	Open in IMG/M
3300014495\|Ga0182015_10842126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300014501\|Ga0182024_10541652	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300014874\|Ga0180084_1087278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	648	Open in IMG/M
3300015242\|Ga0137412_10275593	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300015245\|Ga0137409_10490808	Not Available	1051	Open in IMG/M
3300016422\|Ga0182039_10677607	Not Available	907	Open in IMG/M
3300017929\|Ga0187849_1059406	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300017931\|Ga0187877_1006382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8316	Open in IMG/M
3300018013\|Ga0187873_1005270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8615	Open in IMG/M
3300018023\|Ga0187889_10001726	All Organisms → cellular organisms → Bacteria	22901	Open in IMG/M
3300018084\|Ga0184629_10056821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1805	Open in IMG/M
3300018422\|Ga0190265_10068556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3189	Open in IMG/M
3300018482\|Ga0066669_12006720	All Organisms → cellular organisms → Bacteria → PVC group	542	Open in IMG/M
3300019487\|Ga0187893_10014544	All Organisms → cellular organisms → Bacteria	10707	Open in IMG/M
3300019487\|Ga0187893_10596388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	701	Open in IMG/M
3300019785\|Ga0182022_1227267	Not Available	1877	Open in IMG/M
3300021073\|Ga0210378_10232665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	700	Open in IMG/M
3300021411\|Ga0193709_1000088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	40978	Open in IMG/M
3300022553\|Ga0212124_10024071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3858	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10005235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7673	Open in IMG/M
3300025469\|Ga0208687_1075800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	753	Open in IMG/M
3300025936\|Ga0207670_10553778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	940	Open in IMG/M
3300026557\|Ga0179587_10877498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	591	Open in IMG/M
3300027621\|Ga0208951_1094645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	820	Open in IMG/M
3300027688\|Ga0209553_1005570	All Organisms → cellular organisms → Bacteria	5841	Open in IMG/M
3300027874\|Ga0209465_10247407	Not Available	892	Open in IMG/M
3300027903\|Ga0209488_10618117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	784	Open in IMG/M
3300031057\|Ga0170834_104269372	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300031128\|Ga0170823_10742366	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300031231\|Ga0170824_118221620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2288	Open in IMG/M
3300031446\|Ga0170820_11975917	Not Available	553	Open in IMG/M
3300031474\|Ga0170818_103095763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	621	Open in IMG/M
3300031576\|Ga0247727_10054907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4782	Open in IMG/M
3300031576\|Ga0247727_10680793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	756	Open in IMG/M
3300031999\|Ga0315274_10005306	All Organisms → cellular organisms → Bacteria	18841	Open in IMG/M
3300031999\|Ga0315274_10326675	Not Available	1816	Open in IMG/M
3300032164\|Ga0315283_11218792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	785	Open in IMG/M
3300032177\|Ga0315276_11469584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	710	Open in IMG/M
3300032261\|Ga0306920_104093414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	528	Open in IMG/M
3300032397\|Ga0315287_11803493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	681	Open in IMG/M
3300032397\|Ga0315287_11986295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	641	Open in IMG/M
3300032401\|Ga0315275_11640295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	687	Open in IMG/M
3300032401\|Ga0315275_11934655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	623	Open in IMG/M
3300032401\|Ga0315275_12282846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	564	Open in IMG/M
3300032516\|Ga0315273_11539450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	815	Open in IMG/M
3300032770\|Ga0335085_11078102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	862	Open in IMG/M
3300032829\|Ga0335070_12054655	Not Available	513	Open in IMG/M
3300033402\|Ga0326728_10190254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2097	Open in IMG/M
3300033405\|Ga0326727_10965559	Not Available	627	Open in IMG/M
3300033418\|Ga0316625_102328338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	537	Open in IMG/M
3300033485\|Ga0316626_10339393	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300033521\|Ga0316616_101362720	Not Available	912	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.87%
Host-Associated	Host-Associated	4.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.02%
Aquatic	Environmental → Aquatic	38.84%
Plants	Host-Associated → Plants	4.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.07%
Freshwater	Environmental → Aquatic → Freshwater	30.58%
Sediment	Environmental → Aquatic → Sediment	6.61%
Cave	Environmental → Terrestrial → Cave	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.48%
Marine	Environmental → Aquatic → Marine	1.65%
Peat	Environmental → Terrestrial → Peat	1.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.50%
Lake	Environmental → Aquatic → Freshwater → Lake	14.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.96%
Loam	Environmental → Terrestrial → Soil → Loam	4.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.40%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.18%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.48%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.65%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.65%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.65%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004768	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005487	Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichment	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013088	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02669930	2088090014	Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLNRSQTAEEEEMVQTAIAEHRRAARRKRG
INPhiseqgaiiFebDRAFT_1054679143	3300000364	Soil	MTTTVSVSPNGQVELPEEFRKRKKIKPGTVLRVTEIGEGLYVSPLPRPTEKELREIIAASGSLTRRQTAEDDEMVQHVIAEYRAEKRRK*
JGI1027J11758_127198422	3300000789	Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLNRSQTAEEEEMVQTAIAEHRRAARRKRG*
JGIcombinedJ13530_1009537042	3300001213	Wetland	MTTTISVSTKRQVVLPKTFCDRKRIKPGTALRVTEVGDGLYVTPIPEPSEHELKSVMAEAGSLTRRQTSDEEAMVEEMIGEYRAQKPRRRR*
JGIcombinedJ13530_1083763682	3300001213	Wetland	MTTTINVTPKRQLALPEAFCQRKRIKPGTALRVTEVGDGLYVTPIPEPSEKELKQVLAAAGSLTRPATAEDERIVQRTIAGFRAEKRQRHL*
JGI25928J51866_10376691	3300003616	Freshwater Lake	MTTTVSVLKNGEVELPENFRRRNKIKPGTALRVTEVGGGLYVTAHAEPTEKELREVIAAAGSLTRPQSKAEENMLRETITGYRAEQRRKE*
Ga0066395_102020661	3300004633	Tropical Forest Soil	MTTTINVSTKRQVVLPKKFCDRKNIQAGTALRVTEVGEGLYVTPIAEPTEKELKKVLANAGSLKREQTAEEEEMVEQIIQKYRQDKRRRK*
Ga0007762_14822272	3300004768	Freshwater Lake	VSVLKNGEVELPEDFRRRNKIKPGTALRVTEVGGGLYVTAHAEPTEKELREVIAAAGSLTRPQSKAEENMLRETITGYRAEQRRKE*
Ga0066685_104036702	3300005180	Soil	MTTTISVRTRRQVVLPKTFCDRKKIKPGTTLRVTEVGEGLYVTPVTEPTEEELKQVLASAGSLVRHQTREEEETVQQMIRK*
Ga0066675_111209571	3300005187	Soil	GQVELPEDFCRRKKIKPGTVLRVTEVGDGVYVTPVTEPTERELKEVVAVAGSLTRRETAQDEGMVQQVIADYRSRG*
Ga0070690_1004780011	3300005330	Switchgrass Rhizosphere	MTTTISVSPKRQVELPEDFCERKKIKPGTALRVTEVGDGLYVTPMPEPTEKELREVIAAAGSLMRRQTAEEAEMVQQVIADYRQGKRRKRR*
Ga0066388_1084668781	3300005332	Tropical Forest Soil	MTTTISVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVIAAAGSLARRQTPEEEEMVQEMISDYRASKRKRR*
Ga0070689_1007760762	3300005340	Switchgrass Rhizosphere	MELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELPEVIAAAGSLRRRQTAEEEEIVQQVITDYRAEKRKRR*
Ga0066686_107754142	3300005446	Soil	SVSSEGNLKLPEEFRRRRKIKPGTALRVTEIGNGLYVTPVAEPTEKELREVIATAGSLRAGQRPEDEDMVHRIIAEYRKEKRQKRG*
Ga0074211_1200251	3300005487	Sediment	MALPEQFRRRKKIKPGMALRVTEAGEGLYVTPLPEPTEKELREVIAAAGSLTRRETCEDAGMVQETVARYRAEKSLRKG*
Ga0066704_110471211	3300005557	Soil	ILRKLPAGAVCRLVARRSMKYSVAMTTTVSVSQKGRVELPKGFRKRKKIKPGTALRMTEVGEGLYVTPLPEPTAKELREVIAAAGSLTRRQTREEEEMVQSVIAEYREEKRQKR*
Ga0066698_102768263	3300005558	Soil	MTTTVSVSSEGNLKLPEEFRRRRKIKPGTALRVTEIGNGLYVTPVAEPTEKELREVIATAGSLRAGQRPEDEDMVHRIIAEYRKEKQQKRG*
Ga0049085_100010277	3300005583	Freshwater Lentic	MTTTVSVLKNGEVELPEDFRRRNKIKPGTALRVTEVGGGLYVTAHAEPTEKELREVIAAAGSLTRPQSKAEENMLRETITGYRAEQRRKE*
Ga0068864_1003865683	3300005618	Switchgrass Rhizosphere	MTTTINVSPKRQMELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELPEVIAAAGSLRRRQTAEEEEIVQQVITDYRAEKRKRR*
Ga0074479_104943931	3300005829	Sediment (Intertidal)	LVARRPMKYSVAMTTTVNVSPKGQMDLPEEFRKRRKIRPGAALRVTEVGDGLYVTPLPEPSEKELREVIAAAGSLTRAETPEDEAMVQRVIADYRKEKRQKQG*
Ga0079037_1009355113	3300006224	Freshwater Wetlands	AMTTTISVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELRAIIAAAGSLTRRQTAEEEEMVQQVIADYRAGKRKRR*
Ga0075424_1003486612	3300006904	Populus Rhizosphere	MTTTVNVSKNGQVELPKEFRKRKKIRPGMALRVTEVAGGLYVTPLPEPTEHELKEVIAAAGSLTRNQTVEEEELVKRTIAEYRAERRRA*
Ga0075424_1027186251	3300006904	Populus Rhizosphere	LLRGGAMRYSEAMTTTVNVSRKGEVELPEGFRKRKKIKPGSALRVTEVGDGLYVTTLPEPTEKQLREVIAAAGSLTRRQTHEEEKMVQNVIAECREGKRRKRG*
Ga0099791_105751622	3300007255	Vadose Zone Soil	VNVSQKGQVELPESFRKRRKIKPGTALRVTEVGDGLYVTPLSEPTEQELQKVITAAGSLIHSQTPEEEEMVQNAIGEHRKSTRRKRG*
Ga0099794_101632151	3300007265	Vadose Zone Soil	MTTTVNVSQKGQVELPESFRKRRKIKPGTALRVTEVGDGLYVTPLSEPTEQELQKVITAAGSLIHSQTPEEEE
Ga0066710_1000649523	3300009012	Grasslands Soil	MTTTVSVSSEGNLKLPEEFRRRRKIKPGTALRVTEIGNGLYVTPVAEPTEKELREVIATAGSLRAGQRPEDEDMVHRIIAEYRKEKRQKRG
Ga0066710_1043823171	3300009012	Grasslands Soil	MTTTISVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVKPLPEPNEKELREVIAAAGSLARRQTVEDEEMMQMVYAYNRDDKRIRRLV
Ga0066710_1046421851	3300009012	Grasslands Soil	MRTTINVSPKRQVELPKDFCDRNKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVITAAGSLKHRQTPEDGEMVQQVIADYRAEQRKRR
Ga0115026_107394951	3300009111	Wetland	MATTINVTPRRQLALPEEFCRRKRIKPGTALRVTEVAEGLYVTPIPEPSEKEMKQVIAAAGSLTRPPTAEDEQRVQRAIVSFRAEKRRRGS*
Ga0066709_1031560502	3300009137	Grasslands Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALHITEVGNGLYVTPLSEPTEKELHKVIAAAGSLNRSQTAEEEEMVQTAIAEHRRAARRKRG*
Ga0066709_1036811501	3300009137	Grasslands Soil	MTTTINVSTKRQVVLPKRFCERKKIKPGTALRVTEVGEGLYVTPVSEPTEQELKEVLASARSLMRKQTHEEDQVVQQIIQEYRREKRRARR*
Ga0116128_10534401	3300009518	Peatland	LPKHFCERKKIKPGTALRVTEVGDGLYTTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKRGRRR*
Ga0105347_13238751	3300009609	Soil	SQEVLVAFTILTYVSLDMTTTTSVSPKGEVALPKDFCKRKKIKPGTALRLTEIGDGVYVTPIPEPTEQELKEVIAAAGSLTRPQTAEDERMVQRVIAGYRKEKRRKHG*
Ga0116103_11257572	3300009615	Peatland	MTTTVSVSQTGQVELPEEFRRRKKIKPGATLRVTEVGDGLYVTPLTEPTERELRAVIATAGSLTRYQTAEDEEMVREVVAEYRDEKRRKRG*
Ga0116123_10719891	3300009617	Peatland	PEEFRRRKKIKPGATLRVTEVGDGLYVTPLTEPTERELRAVIATAGSLTRYQTAEDEEMVREVVAEYRDEKRRKRG*
Ga0116123_10723432	3300009617	Peatland	MTPTTISVSTKRQVVLPKHFCERKKIKPGTALRVTEVGDGLYTTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKRGRRR*
Ga0116131_11081711	3300009760	Peatland	LPKHFCERKKIKPGTALRVTEVGDGLYTTPIPEPTGEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKR
Ga0134111_103031251	3300010329	Grasslands Soil	MTTTINVSPKRQVELPKDFCDRNKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVITAAGSLKHRQTPEDGEMVQQVIADYRAEQRKRR*
Ga0126378_131163601	3300010361	Tropical Forest Soil	MTTTINVSTKRQVVLPKKFCDRKNIQAGTALRVTEVGEGLYVTPIAEPTEKELKKVLVNAGSLKREQTAEEEEMVEQIIQKYRQDKRRRK*
Ga0136847_113025851	3300010391	Freshwater Sediment	MTTTVNMTDKGQVELPKEFRRRKKIKPGAPLRVTEVGDGLYITPIPEPTEKELKAVIAAAGSLAGAPTEADQQLVQDTIRDYRSGRRSFPGGRAGKRGEGNRFKRPSLA*
Ga0136847_118768332	3300010391	Freshwater Sediment	MTTTISVSPNRQVKLPEEFCRRKKIKPGTALRVTEVGDGLYVAPMPEPTENELKEVIAAAGSLARHQTPAEEEMVRQVIADYRGEQRRKRG*
Ga0136847_127091102	3300010391	Freshwater Sediment	MTTTINVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVIAAAGSLTRRQTAAEEEMVQQVIAGYRAAKRKRR*
Ga0134122_122442032	3300010400	Terrestrial Soil	MTTTVNVSRKGEVELPEGFRKRKKIKPGSALRVTEVGDGLYVTTLPEPTEKQLREIIAAAGSLTQRQTHEEEKMVQNVIAECREGKRRKRG*
Ga0137391_104600332	3300011270	Vadose Zone Soil	MTTTISVRTRRQVVLPKTFCDRKKIKPGTTLRVTEVGEGLYVTPVTEPTEEELKQVLASAGSLARHQTREEEETVQQMIRDYRDQKRRRNR*
Ga0137393_115697141	3300011271	Vadose Zone Soil	NVSTKRQVVLPKKFCDRKKIKPGTALRVTEVGEGLYVTPISEPTEKELKSVIESAGSLLRRQTAEEEQMVQQLIRDYREEKHRHKR*
Ga0137443_10759091	3300011433	Soil	MTTTINVTDNGQVQLPKEFRQRKKIKAGTPLRVTEVGEGIYITPIPEPTEKELKEVIAAAGSLGRPQTEEEATLVQDTIREYRSERRSKGR*
Ga0137451_11705132	3300011438	Soil	MTTTVNVSPKGQMDLPEAFRKRRKIRPGAALRVTEVGDGLYVTPLPEPSEKELREVIAAAGSLSRAETPEDEAMVQRVITDYRKEKRQKQRS
Ga0137452_13228661	3300011441	Soil	MTTTINVTGKGQVELPKEFRRRKRIKPGTPLRVTEVGEGLYISPIPEPTEKELREVIATAGSLNRPQTDAEQKLVQDTIDEYRAERRSRRR*
Ga0137437_13008632	3300011442	Soil	MTTTVSISKNGAVELPEDFRKRKKIKPGMSLRVTEVGDGLYVTPVAEPTVKELREVIAAAGSLVRRQSREEEELVQATITEFRAEKRRKRR*
Ga0137382_103162672	3300012200	Vadose Zone Soil	MTTTINVSPKRQVELPEDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELREVIVAAGSLTRRQTPEEEEMVQQVIADYRAGKRKRR*
Ga0137382_112329012	3300012200	Vadose Zone Soil	KRQVVLPKNFCERKKIKPGTSLRVTEIGEGLYVTPISEPTEEELKKVIASAGSLKREQTAEEEQLVEQMIQEYRQEKRRRKR*
Ga0137365_107245081	3300012201	Vadose Zone Soil	MTTTISVSPKRQVELPEEYCKRKKIKPGTALRVTEVGDGLYVSPLPEPTENELKEVISAAGSLTRRQTPEDEEMVRQVIADYREEKRRKR*
Ga0137363_100783813	3300012202	Vadose Zone Soil	MTTTVNVSQKGQVELPESFRKRRKIKPGTALRVTEVGDGLYVTPLSEPTEQELQKVITAAGSLIHSQTPEEEEMVQNAIGEHRKSTRRKRG*
Ga0137380_115781602	3300012206	Vadose Zone Soil	MTTTVNVSENGHLELPEAFRKRKKVKPGTALRVTEVGEGLYVTPVREPTERELRDVIAAAGSLRRRQTPAEEEIVQDVIASYRHEKRSKGLIPR*
Ga0137376_108845322	3300012208	Vadose Zone Soil	MTTTTTTISVSPKRRVELPEEYCKRQKIKPGTAMRVTEVGDGLYVSPMPEPTEKELKEVIAAAGSLTRRQTPEDEEMVQQVIADYHEEKRRKR*
Ga0137377_105578242	3300012211	Vadose Zone Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLSRSQTAEEEEIVQTAIAEHRKAARRKRG*
Ga0150985_1226064102	3300012212	Avena Fatua Rhizosphere	MTTTVNVSKNGQVELPKEFRKRKKIRPGMALRVTEVAGGLYVTPLPEPTEHELREVIAAAGSLTRNQTAEEEELVKQTIAEYRAERRRG*
Ga0137372_108047532	3300012350	Vadose Zone Soil	MTTTISVSPTRQVELPEAYCKRKKIKPGTALRVTEVGDGLYVSPMPEPTEKELKEVIAAAGSLTRRQTAEDAEMVRQVIADYREEKRRKR*
Ga0137366_106580751	3300012354	Vadose Zone Soil	SWTMTTTISVSPTRQVELPEAYCKRKKIKPGTALRVTEVGDGLYVSPMPEPTEKELKEVIAAAGSLTRRQTAEDAEMVRQVIADYREEKRRKR*
Ga0137368_105935491	3300012358	Vadose Zone Soil	RRKKIKPGTPLRVTEVGDGLYITPIPEPTEMELKEVIAATGSLAGAPTEADQQMVQDTIRDYRAERRAKGR*
Ga0137361_104464613	3300012362	Vadose Zone Soil	MTTTISVRTRRQVVLPKNFCDRKKIKPGTTLRVTEVGEGLYVTPVVEPTEEELKQVLATAGSLARHQTREEEETVQQMIRDYRDQKRRRNR*
Ga0150984_1091398852	3300012469	Avena Fatua Rhizosphere	KNGQVELPKEFRKRKKIRPGMALRVTEVAGGLYVTPLPEPTEHELREVIAAAGSLTRNQTAEEEELVKQTIAEYPAERRRG*
Ga0137394_103283403	3300012922	Vadose Zone Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKDLHKVIAAAGSLIRSQSAEEEEMVQTAIAEHRKAARRKRG*
Ga0137359_105343072	3300012923	Vadose Zone Soil	MMTTISVSTKRQVVLPKGFCDRKKIKPGTALRVTEVGDGLFFFNIAAPTERELREVVAIAGSLRGRQTVAEETMVQNEIQAYRLEKHRHKK*
Ga0137410_106156572	3300012944	Vadose Zone Soil	MTTTVNVSQKGQVELPESFRKRRKIKPGTALRVTEVGDGLYVTPLSEPTEQELQKVITAAGSLIHSQTPEEEEMV
Ga0163200_12096162	3300013088	Freshwater	MTTTVSVSPKGQMDLPEEFRRRRGIKPGAALRVTEVGDGLYVTPLTEPSEKELREVIAAAGSLTHPETPEDEAMVQRVISEYRREKRQKQG*
Ga0181530_101685432	3300014159	Bog	MTTTVSVSQTGQVELPEEFRRRRKIKPGATLRVTEVGEGLYFTPLTEPTERELRAVIAAAGSLTGCQTAEDEAMVRKAVAEYREEKRQK*
Ga0182015_108421261	3300014495	Palsa	MTTTVNVLPKGQMELPEEFRRRKRIKEGTVLRVTEVGEGLYVTPVHEPTEKELREVIATAGSLSRRQNMEEEEMVDRIIGEYRKEKRRKRG*
Ga0182024_105416522	3300014501	Permafrost	MTTTINVLPKGKMELPQEFRKRKRIKEGTSLRVTEVGDGLYVTALHEPTEEELREVIATAGSLSRRQNVQEEQMVDRIIAEYRKEKRGKRG*
Ga0180084_10872782	3300014874	Soil	MTTTTSVSPKGEVALPKDFCKRKKIKPGTALRLTEIGDGVYVTPIPEPTEQELKEVIAAAGSLTRPQTAEDERMVQRVIAGYRKEKRRKHG*
Ga0137412_102755931	3300015242	Vadose Zone Soil	TTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLSRSQTAEEEEIVQTAIAEHRKAARRKRG*
Ga0137409_104908082	3300015245	Vadose Zone Soil	MTTTVNVSQKGQVELPESFRKRRKIKPGTALRVTEVGDGLYVTPLSEPTEQELQKVITAAGSLIHSQTPEEEEMVQNAIGEHRKSTRR
Ga0182039_106776071	3300016422	Soil	VVLQKSFCDRKKIKPGTTLRVTEVGEGLYITPIAEPTEQELKEVIASAGSLTRRQTADEAQLVRKAIADYRSERRSRRR
Ga0187849_10594063	3300017929	Peatland	MTTTVSVSQTGQVELPEEFRRRKKIKPGATLRVTEVGDGLYVTPLTEPTERELRAVIATAGSLTRYQTAEDEEMVREVVAEYRDEKRRKRG
Ga0187877_10063821	3300017931	Peatland	LPKHFCERKKIKPGTALRVTEVGDGLYTTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKRGRRR
Ga0187873_10052702	3300018013	Peatland	MTPTTISVSTKRQVVLPKHFCERKKIKPGMALRVTEVGDGLYTTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKRGRRR
Ga0187889_1000172610	3300018023	Peatland	MTPTTISVSTKRQVVLPKHFCERKKIKPGMALRVTEVGDGLYMTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYRAEKRGRRR
Ga0184629_100568212	3300018084	Groundwater Sediment	MTTTVSISKNGAVELPEDFRKRKKIKPGMSLRVTEVGDGLYVTPVAEPTVKELREVIAAAGSLVRRQSREEEELVQATITEFRAEKRRKRR
Ga0190265_100685566	3300018422	Soil	MTTTVSVLKNGEVELPEDFCKRNKIKPGTALRMTEVGGGLYVTAHTEPTEKELRAVVAAAGSLTRPQRKEEADMLRETISEYRAEKRRKG
Ga0066669_120067202	3300018482	Grasslands Soil	MTTTVNVSENGHLKLPEAFRKRKRIKPGTALRVTEVGEGLYVTPLREPTEKELRDVIAAAGSIRRRQSRAEEEMVQDVIA
Ga0187893_100145448	3300019487	Microbial Mat On Rocks	MSDKGQVELPKAFRERRKIKPGTPLRVTEVGEGLYITPIPEPTEKELKEVIAAAGSLTRPQNEAEGKLVEETIREYRAGRRSKGR
Ga0187893_105963882	3300019487	Microbial Mat On Rocks	MLVVRRTMKYGGAMTTTVSVSQKGQMELPEEFRKRKNIKPGTVLRVTEIGEGLYVTPLAEPTEKELRDVIAAAGSLRRRETPEDEELVQRIIAEYRDERRRKRR
Ga0182022_12272672	3300019785	Fen	MTTTVSVLPKGQVELPAGFRRRKNIKPGTTLRVTEIGDGLYVTPMAEPTERELRDVIAAAGSLAHRQSLEEEEMVQQLIAEYREEKRRKK
Ga0210378_102326653	3300021073	Groundwater Sediment	MTTTINVSPKRQVELPKDFCERKKIKPGTALRMTEVGDGLYVTPLPEPTEKELREVIAAAGSLTHRQTPDEEEMVQQVIANYRAEKRKRR
Ga0193709_100008811	3300021411	Soil	MTTTVSVSQKGQVELPEDFRRRNKIKPGTALRVTEIGDGLYVTPLLAPTEKELRKVIAAAGSLIAPQSTEEEEMVQSAIAEYRKSRRRKR
Ga0212124_100240712	3300022553	Freshwater	MTTTISMTAQGQLALPEDFCKRKRIKPGMALRVTEVGDGLYVTPIPEPTEEELKEVVAAAGSLTHGQTVEEEAMVQQVVDEYRAEKRRPGR
(restricted) Ga0233424_100052357	3300023208	Freshwater	MTTTINVSQKRQVELPKDFCERKKIKPGTALRVTEVGEGLYVTLLPEPTEKELREVIAVAGSLTRRQTAQEEEMVRQEIADYRAAKRKRR
Ga0208687_10758001	3300025469	Peatland	LPKHFCERKKIKPGTALRVTEVGDGLYTTPIPEPTEEELKNVIACAGSLTRRQTRKEEEMVQEAIAEYR
Ga0207670_105537782	3300025936	Switchgrass Rhizosphere	MTTTINVSPKRQMELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELPEVIAAAGSLRRRQTAEEEEIVQQVITDYRAEKRKRR
Ga0209056_101629461	3300026538	Soil	CDRKKIKPGTTLRVTEVGEGLYVTPVTEPTEEELKQVLASAGSLVRHQTREEEETVQQMIRK
Ga0179587_108774981	3300026557	Vadose Zone Soil	MTTTINVSPKRQVELPKDFCERKKIKPGTALRVTEVGNGLYVTPLPEPTEKELREVIAAAGSLTRQQTPEDEEMVQQVIADYRAARRKRR
Ga0208951_10946451	3300027621	Freshwater Lentic	MTTTVSVLKNGEVELPEDFRRRNKIKPGTALRVTEVGGGLYVTAHAEPTEKELREVIAAAGSLTRPQSKAEENMLRETITGYRAEQRRKE
Ga0209553_10055702	3300027688	Freshwater Lake	MTTTVSVLKNGEVELPENFRRRNKIKPGTALRVTEVGGGLYVTAHAEPTEKELREVIAAAGSLTRPQSKAEENMLRETITGYRAEQRRKE
Ga0209465_102474072	3300027874	Tropical Forest Soil	MTTTINVSTKRQVVLPKKFCDRKNIQAGTALRVTEVGEGLYVTPIAEPTEKELKKVLANAGSLKREQTAEEEEMVEQIIQKYRQDKRRRK
Ga0209488_106181171	3300027903	Vadose Zone Soil	MTTTISVSTKRQVVLPKKFCERKKIGPGTALRVTEVGDGLYVTAVPEPSEAELKRVMACAGTLARRQTPEEELMVQATIGAY
Ga0170834_1042693722	3300031057	Forest Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELYKVIAAAGSLNRSQTAEEEKMVQTAIAEHRKAARRKRG
Ga0170823_107423663	3300031128	Forest Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLNRSQTAEEEEMVQTAIAEHRKAARRKRG
Ga0170824_1182216202	3300031231	Forest Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTALRITEVGNGLYVTPLSEPTEKELHKVIAAAGSLNRSQTAEEEKMVQTAIAEHRKAARRKRG
Ga0170820_119759171	3300031446	Forest Soil	MTTTVNVSQGGQVELPEGFRKRRKIKPGTAVRITEVGNGLYVTPLSEPTEKDLHKVIAAAGSLTRSQSAEEEEMVQTAIAEHRKA
Ga0170818_1030957632	3300031474	Forest Soil	LRSIAYFSAMTTTVNVSREGQVELPEGFRKRRKIKPGTALRVTEIGNGLYVTPLSEPTEKDLHKVIAAAGSLTRSQSAEEEEMVQTAIAEHRKAARRKRG
Ga0247727_100549074	3300031576	Biofilm	MTTTVSVLTKRQVELPKDYCDRKRIRPGTALRVTEVSGGLFVTPLAEPTERELKEVIAAAGSLTRRQSAEEEATVKQVIAAYRGERRGKKE
Ga0247727_106807933	3300031576	Biofilm	TDKGQVELPKEFRQRRKIKPGTALRVTEVGDGLYITPIPEPTEKELKEVIAAAGSLTRPQSEAEEKLVQDTIREYRAGRRSKER
Ga0315274_100053063	3300031999	Sediment	MTTTINVTPRRQLALPEEFCQRKRIKPGTALRVTEVGEGLYVTPIPEPSEKELKQVIAAAGSLTRPPTAEDEQRVQRTIDGFRAEKRRRRS
Ga0315274_103266754	3300031999	Sediment	VTTTISLTAKGQLALPKEFCKRKRIKPGTALRVTEVGDGLYVTPLPEPTAKELKEIIAAAGSLIHGQTVEEETMVQQVIDEYRAEKRRPAR
Ga0315283_112187922	3300032164	Sediment	MTTTISVRAKGELALPKEFCRRKKIKPGMTLRVTEVGEGLYVTPIPEPTEEELKEVIAAAGSLKHPQTAEEEALVREAIHEYRTRNRRGGG
Ga0315276_114695841	3300032177	Sediment	LRTYAARGKVPTMTTTINVTPRRQLALPEEFCQRKRIKPGTALRVTEVGEGLYVTPIPEPSEKELKQVIAAAGSLTRPPTAEDEQRVQRTIDGFRAEK
Ga0306920_1040934141	3300032261	Soil	MTTTINVSTKRQVVLPNKFCDRKNIKPGTALRVTEVGEGLYVTPIAEPTEQELKSVIARAGSLMRRQTAKEEDMVQRLIRSYRDGKRPRR
Ga0315286_115171643	3300032342	Sediment	NASGIAKPDRVQYARSMTTPINMSDKGQVELPKEFRQRRKIKAGTSLRVTEVGDGLYITPIPEPTEKELKEVIAAAGSLTRPQSEAEEKLVQDTIREYRSGRRAKGR
Ga0315287_118034931	3300032397	Sediment	MTTTISVRAKGELALPKEFCRRKKIKPGMTLRVTEVGEGLYVTPIPEPTEEELKEVIAAAGSLKHPQTAEEEALVREAIHEYRTRNRRG
Ga0315287_119862952	3300032397	Sediment	MTTTISLTTKRQVALPKRFCERQKIKPGTALRVTEVGDGLYVTPIAEPTELELKEVIACAGSLRRRQTADEEGLVQAVIAEHRVEKRLRKR
Ga0315275_116402952	3300032401	Sediment	KGQLALPKEFCQRKRIKPGMALRVTEVGDGLYMTPIPEPTEEELKEVIAAAGSLTRGQTAAEEAMVQQTIEEYRAEKRRPG
Ga0315275_119346551	3300032401	Sediment	MTTTISATTKRQVVLPKAFCDRKRIKPGTALRVTEVADGLYVTPIAEPTEQELKKVIASAGSLRRRQTPAEEQLIQDLITEHRGKRRSRR
Ga0315275_122828462	3300032401	Sediment	VPTMTTTINVTPRRQLALPEEFCQRKRIKPGTALRVTEVGEGLYVTPIPEPSEKELKQVIAAAGSLTRPPTAEDEQRVQRTIDGFRAEKRRRRS
Ga0315273_115394502	3300032516	Sediment	MTTTISLTTKRQVALPKRFCERQKIKPGTALRVTEVGDGLYVTPIAEPTELELKEVIACAGSLRSRQTADEEGLVQAVIAEHRVEKRLRKR
Ga0335085_110781023	3300032770	Soil	MTTTINVSTKRQVVLPKKFCERKKIRPGTALRVTEVGAGLYVTPIAEPSEQELREVIMQAGSLTRPQDSREEEMVRKTVAEYRAASRLRRR
Ga0335070_120546552	3300032829	Soil	MTTTISVSTKRQVVLPKSFCDRKKIKPGTALRVTEVADGLYVTPIAQPTEQELKEVIARAGSLRRQQTPAEEGLVSQVIADYRAEKRPGRR
Ga0326728_101902543	3300033402	Peat Soil	MELPEEFRRRKRIKEGTTLRLTEVGDGLYVTPLHKPTEKELREVIATAGSLSRRQNVQEEQMVDRIIGEYRKEKRRKRG
Ga0326727_109655591	3300033405	Peat Soil	MTTTVNVLPKGKMELPEEFRRRKRIKEGTTLRLTEVGDGLYVTPLHKPTEKELREVIATAGSLSRRQNVQEEQMVDRIIGEYRKEKRRKRG
Ga0316625_1023283382	3300033418	Soil	MTTTVSVSTKRQVVLPKSFCERKQIKPGTALRVTEVEDGLYVTPIAEPTERELQMVIEEAGSLRRPQTAEEQAMVASTIRQFRAEKRRAR
Ga0316626_103393932	3300033485	Soil	MTTTISVSPKRQVELPKDFCERKKIKPGTALRVTEVGDGLYVTPLPEPTEKELRAIIAAAGSLTRRQTAEEEEMVQQVIADYRAGKRKRR
Ga0316616_1013627202	3300033521	Soil	PSSDLWSLGWLSRTYAAPGKVPTMTTTINVTPRRQLALPEEFCRRKRIKPGTALHVTEVAEGLYVTPIPEPSERELKQVIAAAGSLTRPPTAEDEQRVQRAIVSFRAEKRRRGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters