NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072449

Metagenome / Metatranscriptome Family F072449

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072449
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 80 residues
Representative Sequence MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTP
Number of Associated Samples 114
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.38 %
% of genes near scaffold ends (potentially truncated) 94.21 %
% of genes from short scaffolds (< 2000 bps) 86.78 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.868 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.397 % of family members)
Environment Ontology (ENVO) Unclassified
(30.579 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.843 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.
1INPhiseqgaiiFebDRAFT_1045842882
2F24TB_154402401
3JGI10215J12807_11938671
4JGI10214J12806_122787203
5JGI10220J13317_120612353
6C687J26615_101067692
7C687J26623_100247684
8JGI26128J50194_10059141
9JGI26129J50193_10106072
10JGI26141J51220_10134072
11Ga0055438_100150711
12Ga0055500_100652921
13Ga0062589_1002222701
14Ga0062590_1005391763
15Ga0066397_100469841
16Ga0066685_101975421
17Ga0065696_13048911
18Ga0065712_101168071
19Ga0070703_101236473
20Ga0070710_113139172
21Ga0070700_1010141931
22Ga0070708_1011441971
23Ga0070699_1020425711
24Ga0070697_1021385272
25Ga0070672_1004223511
26Ga0070766_101371701
27Ga0075417_107051792
28Ga0075026_1001086413
29Ga0097621_1019819692
30Ga0079221_112996962
31Ga0079220_118313851
32Ga0075429_1015807491
33Ga0075426_100081627
34Ga0075419_105654323
35Ga0099830_108488581
36Ga0105245_102541181
37Ga0105241_106508193
38Ga0105248_100929385
39Ga0105249_105909593
40Ga0105249_130046131
41Ga0105081_10334081
42Ga0134088_101941073
43Ga0126370_103953971
44Ga0126370_115022612
45Ga0126378_132153692
46Ga0126379_126104882
47Ga0126379_133407132
48Ga0126379_133581552
49Ga0134125_120368891
50Ga0150983_106196213
51Ga0137439_11418062
52Ga0137458_12752611
53Ga0137463_11142041
54Ga0137361_103825841
55Ga0137361_111765792
56Ga0157291_103771551
57Ga0137404_122076941
58Ga0164298_107330971
59Ga0164303_101267821
60Ga0164299_104405963
61Ga0164301_108834502
62Ga0164302_110922552
63Ga0164309_106284061
64Ga0157378_108351863
65Ga0157372_105249681
66Ga0157375_101420744
67Ga0134075_104360001
68Ga0120098_10574512
69Ga0132256_1031921272
70Ga0132255_1019712443
71Ga0182033_106488691
72Ga0187779_105684941
73Ga0184626_100440241
74Ga0184639_103466511
75Ga0190273_120659382
76Ga0184648_10737342
77Ga0193747_10091605
78Ga0193711_10043214
79Ga0193731_10523593
80Ga0193726_11186483
81Ga0193724_10157804
82Ga0210382_100950441
83Ga0210377_104472001
84Ga0210408_111903512
85Ga0210384_113134662
86Ga0126371_110989053
87Ga0242656_10043121
88Ga0242654_100152924
89Ga0209321_101417711
90Ga0210094_10866521
91Ga0207647_101976253
92Ga0207662_100743564
93Ga0207646_1001079710
94Ga0207646_104805823
95Ga0207687_101593124
96Ga0207691_102603984
97Ga0207661_111204892
98Ga0207651_102325624
99Ga0207668_118175142
100Ga0207675_1004754273
101Ga0257170_10007944
102Ga0257180_10027901
103Ga0257150_10631471
104Ga0257146_10263913
105Ga0257171_10207601
106Ga0257160_10347821
107Ga0209869_10190372
108Ga0209845_10502181
109Ga0209996_10011051
110Ga0209982_10015084
111Ga0208981_10354801
112Ga0209588_10065001
113Ga0209283_102042063
114Ga0209481_104517781
115Ga0233417_103994571
116Ga0257175_10000865
117Ga0222749_101848071
118Ga0222749_103268472
119Ga0308194_103600661
120Ga0307505_100482604
121Ga0307469_117782641
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.67%    β-sheet: 0.00%    Coil/Unstructured: 41.33%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
95.9%4.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Sediment
Natural And Restored Wetlands
Soil
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Soil
Agricultural Soil
Soil
Soil
Soil
Hardwood Forest Soil
Tropical Peatland
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Soil
Groundwater Sand
Fossill
Arabidopsis Rhizosphere
Switchgrass Rhizosphere Bulk Soil
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
12.4%5.0%5.8%4.1%10.7%6.6%4.1%4.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10458428823300000364SoilMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPSSDAGVVAPGTTPVDPVLAAPPGDNGDGR
F24TB_1544024013300000550SoilMPDVNSRASFSDEERHSLVXXXRLCEMIIEANPSDTGALETLKEIYTKLGDRERLGQVMARLATLAGGRPLA
JGI10215J12807_119386713300000881SoilMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADP
JGI10214J12806_1227872033300000891SoilMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATA
JGI10220J13317_1206123533300001139SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVVPTSTRAPA
C687J26615_1010676923300002121SoilMAQTENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTMGGRPSASVAPAPELTAVPAPAPA
C687J26623_1002476843300002122SoilMAQTENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTMGG
JGI26128J50194_100591413300003347Arabidopsis Thaliana RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSAAAG
JGI26129J50193_101060723300003349Arabidopsis Thaliana RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVLATPPGDNGDGRGA
JGI26141J51220_101340723300003503Arabidopsis Thaliana RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVLATPPGDNGDGRGAG
Ga0055438_1001507113300003995Natural And Restored WetlandsMAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEP
Ga0055500_1006529213300004062Natural And Restored WetlandsMAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSAS
Ga0062589_10022227013300004156SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEV
Ga0062590_10053917633300004157SoilMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSAS
Ga0066397_1004698413300004281Tropical Forest SoilMAQIENKTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIP
Ga0066685_1019754213300005180SoilMAQASGKASFSAEERQSLMESARLCEMIVEANPSDTGALETLKEIYTKLGDRARLGPVVGRMASLAGGRPAAAGAS
Ga0065696_130489113300005280Switchgrass Rhizosphere Bulk SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTV
Ga0065712_1011680713300005290Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPT
Ga0070703_1012364733300005406Corn, Switchgrass And Miscanthus RhizosphereMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPS
Ga0070710_1131391723300005437Corn, Switchgrass And Miscanthus RhizosphereMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0070700_10101419313300005441Corn, Switchgrass And Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRA
Ga0070708_10114419713300005445Corn, Switchgrass And Miscanthus RhizosphereMAQIESKALSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSAS
Ga0070699_10204257113300005518Corn, Switchgrass And Miscanthus RhizosphereMTQGSRLTSFSDDERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQIVARLAGLAGGS
Ga0070697_10213852723300005536Corn, Switchgrass And Miscanthus RhizosphereMIQHDGPMSPSEDERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLATFAGPSQT
Ga0070672_10042235113300005543Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTST
Ga0070766_1013717013300005921SoilMAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDQENLTRVVARLAGTVGGRPSASVTPPLEPASARPTLPA
Ga0075417_1070517923300006049Populus RhizosphereMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVVTAPAPSPAP
Ga0075026_10010864133300006057WatershedsMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVTAAPIPAVPVPPA
Ga0097621_10198196923300006237Miscanthus RhizosphereMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEAVAPPIRTAAPVPPATVEMDPGMPG
Ga0079221_1129969623300006804Agricultural SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVATPVLDLDAAGS
Ga0079220_1183138513300006806Agricultural SoilMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLADRENLARVVARLAGTVGGRPSASITPAAELAAPAP
Ga0075429_10158074913300006880Populus RhizosphereMAQIENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPT
Ga0075426_1000816273300006903Populus RhizosphereMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTP
Ga0075419_1056543233300006969Populus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVT
Ga0099830_1084885813300009088Vadose Zone SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVAPPIPA
Ga0105245_1025411813300009098Miscanthus RhizosphereMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAP
Ga0105241_1065081933300009174Corn RhizosphereMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPM
Ga0105248_1009293853300009177Switchgrass RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVATP
Ga0105249_1059095933300009553Switchgrass RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVA
Ga0105249_1300461313300009553Switchgrass RhizosphereMPDVNSKTSFSDEERHSLVESARLCEMIIEANPSDTGALETLKEIYTKLGDRERLGHVMARLATLAGGRPLASGPSTA
Ga0105081_103340813300009806Groundwater SandMAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGG
Ga0134088_1019410733300010304Grasslands SoilMAQAGGKASLSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRMASLAGGRPAAAG
Ga0126370_1039539713300010358Tropical Forest SoilMAQSDNKTSLSPDEKRSLSESARLCEMIVEANPSDTGALETLKEIYGKLSDRENLARVVARLAGTVGGRPSASVIASAE
Ga0126370_1150226123300010358Tropical Forest SoilMSPATFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLAGLAAGRPLASGVATGPRPVS
Ga0126378_1321536923300010361Tropical Forest SoilMSDVSSKPSFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLAQVMARLATLPGARPLARGSAAVSRSPQ
Ga0126379_1261048823300010366Tropical Forest SoilMSDVSSKPSFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLAQVMARLATLPGARPLARGS
Ga0126379_1334071323300010366Tropical Forest SoilMAQSDNKTSLSPDEKRSLSESARLCEMIVEANPSDTGALETLKEIYGKLGDRENLARVVARLAGTVGGRPSASVIPSVE
Ga0126379_1335815523300010366Tropical Forest SoilMPDVNSKPSFSDEERHSLVESASLCEMIVEANPSDTGALETLKEIYTKLGDRERLSQVMARLATLAGGRPLASGSAA
Ga0134125_1203688913300010371Terrestrial SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRP
Ga0150983_1061962133300011120Forest SoilMAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDHENLTRVVARLAGTVGGRPSASVTPPLEPAP
Ga0137439_114180623300011424SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0137458_127526113300011436SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPMNVGATGR
Ga0137463_111420413300011444SoilMAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPS
Ga0137361_1038258413300012362Vadose Zone SoilMAQASGKASFSAEERQSLVESAQLCEMIVEANPSDTVTDETLKEIYTKLGDRERLGQVVGRMASLAGGRPAAAG
Ga0137361_1117657923300012362Vadose Zone SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGR
Ga0157291_1037715513300012902SoilMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIP
Ga0137404_1220769413300012929Vadose Zone SoilMAQASGKASFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRLASLAGGR
Ga0164298_1073309713300012955SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTPAPAPAPVATPV
Ga0164303_1012678213300012957SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTRAPAP
Ga0164299_1044059633300012958SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTRAPAPAPV
Ga0164301_1088345023300012960SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVVTAPA
Ga0164302_1109225523300012961SoilMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPPANSL*
Ga0164309_1062840613300012984SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPVPEVAAAPIPAAPVPLAPATVELEPGMS
Ga0157378_1083518633300013297Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGHVVARLAALAGAGQG
Ga0157372_1052496813300013307Corn RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASIIPSAAAGIAPAADPVL
Ga0157375_1014207443300013308Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRP
Ga0134075_1043600013300014154Grasslands SoilMAQASGKASFSAEERQSLMESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRLASLAGGRPAAAGAS
Ga0120098_105745123300015170FossillLAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVVSAPELVAGRSRSSDEMEAL
Ga0132256_10319212723300015372Arabidopsis RhizosphereMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRGNLSRVVARLAGTVGGRPSASVTP
Ga0132255_10197124433300015374Arabidopsis RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTPAPAPA
Ga0182033_1064886913300016319SoilMPDVNSKAPFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYPKLGDRERLSQVRGRLDTLAGGRPL
Ga0187779_1056849413300017959Tropical PeatlandMAQIDNKTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYAKLGDRENLGRVVARLAGTVGGRPSASVTPPSEP
Ga0184626_1004402413300018053Groundwater SedimentMAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTV
Ga0184639_1034665113300018082Groundwater SedimentMAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGT
Ga0190273_1206593823300018920SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAG
Ga0184648_107373423300019249Groundwater SedimentMAQIDNKASLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPA
Ga0193747_100916053300019885SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAA
Ga0193711_100432143300019997SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVG
Ga0193731_105235933300020001SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVPAAAA
Ga0193726_111864833300020021SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVPA
Ga0193724_101578043300020062SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVP
Ga0210382_1009504413300021080Groundwater SedimentMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRPSASVAPAAEHAG
Ga0210377_1044720013300021090Groundwater SedimentMAQTENKTSLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEPAPIAAAAPASPIVELES
Ga0210408_1119035123300021178SoilMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVAT
Ga0210384_1131346623300021432SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAREVAAAPIPAAPAPLPAATVE
Ga0126371_1109890533300021560Tropical Forest SoilMSPATFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLGGLAAGRPLASGVATGTRPVSP
Ga0242656_100431213300022525SoilMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEV
Ga0242654_1001529243300022726SoilMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVATAPAPPPA
Ga0209321_1014177113300025312SoilMAQKDSKGSMSTEEKHSLEESARLCEMIVEANPSDTGALETLKEIYTKLGDREKLAKIVVRLAGSTGGRPSATV
Ga0210094_108665213300025549Natural And Restored WetlandsMAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPAPGRAPAAEEMEALAASIEVVP
Ga0207647_1019762533300025904Corn RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAP
Ga0207662_1007435643300025918Switchgrass RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGR
Ga0207646_10010797103300025922Corn, Switchgrass And Miscanthus RhizosphereMAQASDKASFSAEERQSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVRSMASLAGGRPAAAGASIA
Ga0207646_1048058233300025922Corn, Switchgrass And Miscanthus RhizosphereMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPAVVTAPAP
Ga0207687_1015931243300025927Miscanthus RhizosphereMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSA
Ga0207691_1026039843300025940Miscanthus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPA
Ga0207661_1112048923300025944Corn RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0207651_1023256243300025960Switchgrass RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVST
Ga0207668_1181751423300025972Switchgrass RhizosphereMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRPSAS
Ga0207675_10047542733300026118Switchgrass RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTA
Ga0257170_100079443300026351SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGG
Ga0257180_100279013300026354SoilMAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVA
Ga0257150_106314713300026356SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVAPPIPAVAPISPATVELEPGTPG
Ga0257146_102639133300026374SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGGRPSASVTPVPEVAAAPIPAAPA
Ga0257171_102076013300026377SoilMAQIDNKTSLSSEEKRSLGESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRP
Ga0257160_103478213300026489SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGGRPSASVTPVPEVAA
Ga0209869_101903723300027187Groundwater SandMAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIP
Ga0209845_105021813300027324Groundwater SandMAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPSDPTPAVAPAPAPAVAELE
Ga0209996_100110513300027395Arabidopsis Thaliana RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSA
Ga0209982_100150843300027552Arabidopsis Thaliana RhizosphereMAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVGIFGSDRPISS
Ga0208981_103548013300027669Forest SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRP
Ga0209588_100650013300027671Vadose Zone SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTV
Ga0209283_1020420633300027875Vadose Zone SoilMAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAR
Ga0209481_1045177813300027880Populus RhizosphereMAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTP
(restricted) Ga0233417_1039945713300028043SedimentMAQIENKTALSSEEKRSLTESARLCEMIVEANPSDTGALETLKEIYGKLGDRENLARVVARLSGTVGGRPSASVAP
Ga0257175_100008653300028673SoilMAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAREPMTTGAPGRPP
Ga0222749_1018480713300029636SoilMAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDQENLTRVVARLAGTVGGRPSASVTPPLEP
Ga0222749_1032684723300029636SoilMAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVATAPAPP
Ga0308194_1036006613300031421SoilMAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEP
Ga0307505_1004826043300031455SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAPAPEAAPGRAPA
Ga0307469_1177826413300031720Hardwood Forest SoilMAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAPAPEAAPGRAPSTEEMETL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.