Metagenome / Metatranscriptome Family F072301

Overview

Basic Information

• Family ID: F072301
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 121
• Average Sequence Length: 46 residues
• Representative Sequence: MTFKKPTRAGLLALALGVLFALFLSMSVIDRSYAEEAAAPAAA
• Number of Associated Samples: 112
• Number of Associated Scaffolds: 121

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 84.30 %
• % of genes from short scaffolds (< 2000 bps): 72.73 %
• Associated GOLD sequencing projects: 110
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (58.678 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.355 % of family members)
• Environment Ontology (ENVO): Unclassified (25.620 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (42.149 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 42.25%
  β-sheet: 0.00%
  Coil/Unstructured: 57.75%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00543	P-II	80.99
PF00909	Ammonium_transp	16.53
PF13622	4HBT_3	1.65

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	80.99
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	16.53

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.68 %
Unclassified	root	N/A	41.32 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.68 %
Unclassified	root	N/A	41.32 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.68 %
Unclassified	root	N/A	41.32 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.02 %
Unclassified	root	N/A	41.32 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	55.37 %
Unclassified	root	N/A	41.32 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	54.55 %
Unclassified	root	N/A	41.32 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	37.19 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
Unclassified	root	N/A	41.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	36.36 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.65 %
Unclassified	root	N/A	41.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.65 %
Unclassified	root	N/A	41.32 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	23.14 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	22.31 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	1.65 %
Unclassified	root	N/A	41.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Level 11

Name	Rank	Taxonomy	Distribution
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	22.31 %
Rhizobium etli CNPAF512	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	1.65 %
Unclassified	root	N/A	41.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000156|NODE_c0331076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	632
3300000546|LJNas_1025897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	627
3300000579|AP72_2010_repI_A01DRAFT_1060515	Not Available	556
3300000580|AF_2010_repII_A01DRAFT_1006411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1911
3300000651|AP72_2010_repI_A10DRAFT_1050590	Not Available	547
3300000655|AF_2010_repII_A100DRAFT_1041809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	829
3300000655|AF_2010_repII_A100DRAFT_1093394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	528
3300000793|AF_2010_repII_A001DRAFT_10033607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1195
3300000793|AF_2010_repII_A001DRAFT_10073170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	738
3300000793|AF_2010_repII_A001DRAFT_10078976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	705

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.83%
Environmental	Environmental	86.78%
Host-Associated	Host-Associated	12.40%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.31%
Plants	Host-Associated → Plants	12.40%
Solid Waste	Engineered → Solid Waste	0.83%
Terrestrial	Environmental → Terrestrial	83.47%

Category

Habitat	Taxonomy	Distribution
Grass	Engineered → Solid Waste → Grass	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.96%
Sediment	Environmental → Aquatic → Sediment	3.31%
Soil	Environmental → Terrestrial → Soil	83.47%

Type

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.48%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.65%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.57%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03310762	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTFKKPTRAGLMALALGLLFALFLSMSAINVSYAEE
LJNas_10258972	3300000546	Quercus Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAA
AP72_2010_repI_A01DRAFT_10605151	3300000579	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEA
AF_2010_repII_A01DRAFT_10064113	3300000580	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAAEA
AF_2010_repII_A01DRAFT_10445201	3300000580	Forest Soil	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAPAAPAADAAAPPACVGGTTP
AP72_2010_repI_A10DRAFT_10505901	3300000651	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAE
AF_2010_repII_A100DRAFT_10418091	3300000655	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSMSAIDHSYAEE
AF_2010_repII_A100DRAFT_10933942	3300000655	Forest Soil	MTFKKPTGAGLVALALGVLFALFLSISVIDRSYAEEAAPAAAPAAAPASPP
AF_2010_repII_A001DRAFT_100336071	3300000793	Forest Soil	MTFKKPTRAGLVSLALAVLFALFLSFSAIDGSYAEEATA
AF_2010_repII_A001DRAFT_100731702	3300000793	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSISVIDRSYAEGAT
AF_2010_repII_A001DRAFT_100789762	3300000793	Forest Soil	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAPAAPAADAAAPPAC
AP72_2010_repI_A100DRAFT_10508391	3300000837	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAITGSYAEEATTAPAAEASASPPACAG
AP72_2010_repI_A001DRAFT_10385913	3300000893	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAA
JGI10216J12902_1028031892	3300000956	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENCAP
JGI12630J15595_101012631	3300001545	Forest Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENCAPNS
JGI12053J15887_104285352	3300001661	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPACDAKMLINCT
JGI25614J43888_101320061	3300002906	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAAGAAPPACVGNPDPKLAVLENCTPN
JGI25613J43889_100833041	3300002907	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAAGAAPPACVGNPDPKLA
JGI25617J43924_101573492	3300002914	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAA
JGI25617J43924_102206902	3300002914	Grasslands Soil	MTFKKPTSAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAV
JGI25616J43925_101179991	3300002917	Grasslands Soil	MTFKKPTSAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAVLENCTPNS
JGI25405J52794_100695061	3300003911	Tabebuia Heterophylla Rhizosphere	MTFKKPTRAGFVALALGAXLALFLSVSVFDRAYAEQAAPAAPA
Ga0063356_1059808962	3300004463	Arabidopsis Thaliana Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0066388_1022172092	3300005332	Tropical Forest Soil	MPFKKNPTCAGLLALALGVLLALFLSLSVVDHSYAEEAAPAADAAPPACAGGT
Ga0066388_1038434683	3300005332	Tropical Forest Soil	MTFKKPTRAGLVALALGLLFALFLSFSAIDGSYAEEAAATPAA
Ga0070688_1003590391	3300005365	Switchgrass Rhizosphere	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAP
Ga0070659_1000215116	3300005366	Corn Rhizosphere	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAA
Ga0070694_1019108552	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTFSKPSRAGLLGIALGIAFALFLSMSAINGSYAQGAAAVSAQAPPPC
Ga0070663_1020968501	3300005455	Corn Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPA
Ga0066702_106839462	3300005575	Soil	MTFKKPTRAGLVALALGLLFALFLSFSAINGSYAEEAAAAPA
Ga0068864_1004683101	3300005618	Switchgrass Rhizosphere	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAPPAC
Ga0066903_1067338731	3300005764	Tropical Forest Soil	MTFKKPTRAGLVALALGLLFALFLSFSAIDGSYAEEAA
Ga0081455_100493221	3300005937	Tabebuia Heterophylla Rhizosphere	MTFKKPTRAGFVALALGALLALFLSVSVFDRAYAEQAAPAAPAAD
Ga0074062_100346761	3300006606	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPA
Ga0075429_1004503791	3300006880	Populus Rhizosphere	MTFKKPTRAGLVVLALGVLFALLLSMSAIDHSYAEEAAATPAAAGPPACAGNPDPKLAVLEN
Ga0075426_103016361	3300006903	Populus Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEGAAAAPVADSAPPACAGNPDPRFAVLE
Ga0075436_1006832042	3300006914	Populus Rhizosphere	MTFKKPTRAGLVALALAVLFALFLSFSAIDGSYAEEAAAAPAAEA
Ga0099795_105811972	3300007788	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADARAPIPPAWPVPG*
Ga0066710_1002075921	3300009012	Grasslands Soil	MTFKKPTRAGLVALALGALFALFLSMSAIDGSYAEEAAATPAAEA
Ga0105243_121710851	3300009148	Miscanthus Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADA
Ga0126374_117870121	3300009792	Tropical Forest Soil	MTFKKPTGAGLLALALGALFALFMNLSVIDHSYAEEAAAAPVADSAPLACAGNPD
Ga0126380_108166781	3300010043	Tropical Forest Soil	MTFKKPTGAGLLALALGALFALFMNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENC
Ga0126376_124018082	3300010359	Tropical Forest Soil	MTFKKPTRTGLVALALGALFAVFLSLSVIDHAYAEEAAATPAAEPASPPACVGGT
Ga0134128_110021702	3300010373	Terrestrial Soil	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAA
Ga0120191_100137273	3300012022	Terrestrial	MTFKKPTRAGLVALALGVLFALFLSMSAIDGSYAEEAGA
Ga0137364_102258773	3300012198	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSMSAIDHSYAEEAAATPAAAGPPACAGNPDP
Ga0137382_101460893	3300012200	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAP
Ga0137376_101214811	3300012208	Vadose Zone Soil	MTFKKPTRAGLVALTLGLLFALFLSFSAIDGSYAEE
Ga0137377_100941135	3300012211	Vadose Zone Soil	MTFRKPRRAGLLAFALGIVFALFLSMSAVDCSYAQGAAAAPA
Ga0137369_106603632	3300012355	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSFSAINGSYAEEAAAAPAAEA
Ga0137385_100360116	3300012359	Vadose Zone Soil	MTFKKPTRAGLMALALGVLFALFLSFSAINGSYAEEA
Ga0157338_10618862	3300012515	Arabidopsis Rhizosphere	MTFKKPTRAGLVALALGAFFALFLSMSALDHSYAEEAA
Ga0137358_110328632	3300012582	Vadose Zone Soil	MTFKKPIRAGLVALALGVLFTLFMSMSVIDISYAEEAAAAPPPAAAE
Ga0157287_10438121	3300012885	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEA
Ga0157309_101323971	3300012895	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAAD
Ga0157306_103603451	3300012912	Soil	MTFKKPTRAGLLALALGVLFTLLLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0137410_104811882	3300012944	Vadose Zone Soil	MTFKKPTRAGLVALALGLLLGLFLSISTFSPPSYAEEAAPAATPAPAAE
Ga0137412_109983862	3300015242	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAVTPPACD
Ga0132257_1002295081	3300015373	Arabidopsis Rhizosphere	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAP
Ga0182041_109270271	3300016294	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEKAAAAPAAA
Ga0184604_100580941	3300018000	Groundwater Sediment	MTFKKTTRAGLLALALGVLFALFLSISAIDRTYAEE
Ga0184634_102497372	3300018031	Groundwater Sediment	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADA
Ga0184635_103232102	3300018072	Groundwater Sediment	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAET
Ga0187772_103932992	3300018085	Tropical Peatland	MTFKKFSRAGLVALALGVLFGLFLSAASVTSSYAQTPDAT
Ga0190274_139989262	3300018476	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAP
Ga0193700_10227761	3300019873	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAATET
Ga0193701_10508831	3300019875	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAP
Ga0193747_11094061	3300019885	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAATETPPA
Ga0193693_10503761	3300019996	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEE
Ga0193733_11608962	3300020022	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAE
Ga0222623_101051583	3300022694	Groundwater Sediment	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAVETPPA
Ga0247754_11007532	3300023102	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPA
Ga0247794_102580271	3300024055	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAA
Ga0179589_105956972	3300024288	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAP
Ga0207653_102740051	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEA
Ga0207699_100802091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKPTRAGLVALALGLLFALFLSFSAINGSYAEEAAAAP
Ga0207676_123688852	3300026095	Switchgrass Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAV
Ga0257180_10711332	3300026354	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVA
Ga0209523_10561482	3300027548	Forest Soil	MTFKKPTGAGLLALALGALVALFLSLSVIDHSYAEEAAAAP
Ga0209701_106216292	3300027862	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAVLEN
Ga0209465_105430501	3300027874	Tropical Forest Soil	MTFKKPTGAGLLALALGALFVLFLSLSVVDHAYAEAIAAATVADSEPPACAGNPDPRFAV
Ga0209283_100429135	3300027875	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADAAPP
Ga0268265_120141422	3300028380	Switchgrass Rhizosphere	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAA
Ga0137415_103439473	3300028536	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACA
Ga0307301_102926571	3300028719	Soil	MTFKKPIRAGLVALALGLLLGLFLSISAFNPYYAEEAAPAAAP
Ga0307299_102833151	3300028793	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPA
Ga0307503_100021716	3300028802	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAA
Ga0307294_103780972	3300028810	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPAC
Ga0307312_100914224	3300028828	Soil	MTFKKPIRAGLVALALGLLLGLFLSISAFNPSYAEEAAPAAAPAAEAPP
Ga0307312_106297362	3300028828	Soil	MTFKKPTRAGLVALALGILFALFLSFSAINGSYAEEATAAPAAEAPAGPPACAG
Ga0307289_100960554	3300028875	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPACDAKTLVNC
Ga0307286_102174571	3300028876	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0307501_100277083	3300031152	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDRSYAEEAAAPAAA
Ga0308194_102383362	3300031421	Soil	MTFKKPTRAGLVALALGLLLGLFLSISAFNPSYAEEAAPAAAPAA
Ga0318541_100651793	3300031545	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPACAG
Ga0310915_100295395	3300031573	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAE
Ga0318572_100263706	3300031681	Soil	MTFKTPTGAGFLALALGALLVLFLSLSVIDHSYAEEAAAAPA
Ga0310813_112229691	3300031716	Soil	MTFKKPTRAGLVALALAVLFALFLNFSAIDGSYAEE
Ga0310813_123812141	3300031716	Soil	MTFKKPTRAGLFALALGVLFALFLSMSAIDRTYAEEAAA
Ga0307469_117393771	3300031720	Hardwood Forest Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLA
Ga0318493_106203512	3300031723	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPA
Ga0306918_100875211	3300031744	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEAAAAAPV
Ga0318492_102170972	3300031748	Soil	MTFKKPTRAGLLALALGVLFALFLSISVIDRSYAEEAAPAAAPAAEAASPPAC
Ga0318498_100704521	3300031778	Soil	MTFKKPTRAGLVALALGVLFALFLSISVIDRSYAEEAAPAAAPAAEAA
Ga0318498_104681991	3300031778	Soil	MTFKKPTGAGLVALALGALFALFLSLSVIDHAYAEE
Ga0318508_10286791	3300031780	Soil	MTFKKPTRAGLVALALGVLFALFLSLSVIDHAYAEEAAAAPAAAAE
Ga0318547_102162591	3300031781	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAE
Ga0318567_100738871	3300031821	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAAT
Ga0318536_101095153	3300031893	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPACAGN
Ga0318520_100409855	3300031897	Soil	MTFKTPTGAGFLALALGALLVLFLSLSVIDHSYAEEAAA
Ga0306921_126589792	3300031912	Soil	MTFKKNPTYAGLLALALGVLLALFVSLSVIDHSYAEEAAVAQATDAAPPACAGNPDP
Ga0318530_100234183	3300031959	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEAAAAAPVADAA
Ga0318532_100927061	3300032051	Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAAEASASP
Ga0318575_103673103	3300032055	Soil	MTFKKPTRAGLMALALGVLFALFLSISIIDRSYAEEAAPAAAPAAE
Ga0310890_115234611	3300032075	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAA
Ga0306924_120292752	3300032076	Soil	MTFKKPTGAGLLAPALGALFALFLSLSVIDHAYAEEA
Ga0307470_119450392	3300032174	Hardwood Forest Soil	MTFKKPIRAGLVALALGVLFTLFMSMSVIDISYAEEAAAAPPP
Ga0307471_1037963851	3300032180	Hardwood Forest Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEGAAAAPT
Ga0310914_114182791	3300033289	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHAYAEEAAAAPVADSAPPACAGNPDP
Ga0247830_106191132	3300033551	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAA
Ga0314794_125288_2_148	3300034669	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAPP