Metagenome / Metatranscriptome Family F072265

Basic Information
Family ID	F072265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	41 residues
Representative Sequence	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVT
Number of Associated Samples	95
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.12 %
% of genes near scaffold ends (potentially truncated)	91.74 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (68.595 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (33.058 % of family members)
Environment Ontology (ENVO)	Unclassified (66.116 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.942 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1JGI1221J11331_10096596 2JGI25908J49247_101505202 3JGI25907J50239_10331051 4JGI25930J51415_10375293 5Ga0007829_101470841 6Ga0069718_101171762 7Ga0068877_106443101 8Ga0068876_106281592 9Ga0049082_100856171 10Ga0007848_10814083 11Ga0075471_104109163 12Ga0070749_103665561 13Ga0075473_102557871 14Ga0075473_103403223 15Ga0105746_11718443 16Ga0114343_12265431 17Ga0114347_12746112 18Ga0114350_11664442 19Ga0114337_10633055 20Ga0114363_11483621 21Ga0114876_11306083 22Ga0114876_12671502 23Ga0114880_11918631 24Ga0104242_10508873 25Ga0114981_107819551 26Ga0114979_104191883 27Ga0114974_106001012 28Ga0114976_100392111 29Ga0114982_12036461 30Ga0129333_112770322 31Ga0129333_117011802 32Ga0129336_101281604 33Ga0133913_107292051 34Ga0139557_10104482 35Ga0157210_10406781 36Ga0157549_11027752 37Ga0164293_106888241 38Ga0164294_109464352 39Ga0181338_10135773 40Ga0181338_10667841 41Ga0181339_10136001 42Ga0181364_10122271 43Ga0181363_10903712 44Ga0181350_10809021 45Ga0181362_11126832 46Ga0181365_10610431 47Ga0181365_11332531 48Ga0181352_10283354 49Ga0181352_10795023 50Ga0181352_11291531 51Ga0181352_11994142 52Ga0181344_10254325 53Ga0181344_11406221 54Ga0181344_12153932 55Ga0181344_12367982 56Ga0181344_12388882 57Ga0181358_10754671 58Ga0181357_10480084 59Ga0181357_10519711 60Ga0181357_11635741 61Ga0181346_11272213 62Ga0181346_12032861 63Ga0181348_11428453 64Ga0181348_12827822 65Ga0181355_11600603 66Ga0181355_11736151 67Ga0181355_13317831 68Ga0181563_103068343 69Ga0181563_106803042 70Ga0181359_12433422 71Ga0211734_112895343 72Ga0211726_108361753 73Ga0211726_109786371 74Ga0214219_10325373 75Ga0181337_10286593 76Ga0181354_10861153 77Ga0214917_102468563 78Ga0255232_10570913 79Ga0209616_10032481 80Ga0208107_10134081 81Ga0208618_10139981 82Ga0208147_10615383 83Ga0208784_11549453 84Ga0208005_10161366 85Ga0208916_101830583 86Ga0208916_105131952 87Ga0255155_10740161 88Ga0256311_11490672 89Ga0255089_10256651 90Ga0255086_10660781 91Ga0209442_12472231 92Ga0209087_11259083 93Ga0209596_13050312 94Ga0209296_12224471 95Ga0209296_13975872 96Ga0209768_100940103 97Ga0209500_101302101 98Ga0209972_102612993 99Ga0304728_10460735 100Ga0307377_102314211 101Ga0315907_112081862 102Ga0315900_105003991 103Ga0315297_112543522 104Ga0315904_105797951 105Ga0315904_107358661 106Ga0315904_107476041 107Ga0315294_113700892 108Ga0315274_105984563 109Ga0315274_112419431 110Ga0315289_107802503 111Ga0315289_108171833 112Ga0315905_103205681 113Ga0316218_11110041 114Ga0316231_100301325 115Ga0335035_0162674_1_120 116Ga0335063_0128967_1361_1486 117Ga0335066_0344457_1_150 118Ga0335068_0501996_1_141 119Ga0335017_0401900_3_140 120Ga0335065_0470040_631_756 121Ga0335013_0606078_493_639
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1JGI1221J11331_10096596 2JGI25908J49247_101505202 3Ga0007829_101470841 4Ga0068877_106443101 5Ga0068876_106281592 6Ga0075471_104109163 7Ga0070749_103665561 8Ga0075473_102557871 9Ga0105746_11718443 10Ga0114350_11664442 11Ga0104242_10508873 12Ga0133913_107292051 13Ga0164293_106888241 14Ga0181365_11332531 15Ga0181344_12153932 16Ga0181358_10754671 17Ga0181348_11428453 18Ga0181359_12433422 19Ga0214219_10325373 20Ga0181337_10286593 21Ga0208147_10615383 22Ga0209596_13050312 23Ga0335063_0128967_1361_1486
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38. 1Ga0181338_10135773 2JGI1221J11331_10096596 3JGI25907J50239_10331051 4JGI25930J51415_10375293 5Ga0069718_101171762 6Ga0075471_104109163 7Ga0070749_103665561 8Ga0075473_103403223 9Ga0114347_12746112 10Ga0114350_11664442 11Ga0114880_11918631 12Ga0104242_10508873 13Ga0114979_104191883 14Ga0129333_112770322 15Ga0133913_107292051 16Ga0181364_10122271 17Ga0181365_11332531 18Ga0181352_10283354 19Ga0181344_10254325 20Ga0181344_12153932 21Ga0181344_12367982 22Ga0181358_10754671 23Ga0181348_11428453 24Ga0181355_11736151 25Ga0211726_109786371 26Ga0181337_10286593 27Ga0209616_10032481 28Ga0208618_10139981 29Ga0208147_10615383 30Ga0255155_10740161 31Ga0209596_13050312 32Ga0304728_10460735 33Ga0315289_108171833 34Ga0335035_0162674_1_120 35Ga0335063_0128967_1361_1486 36Ga0335068_0501996_1_141
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.84% β-sheet: 0.00% Coil/Unstructured: 67.16%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08448	PAS_4	0.83
PF03237	Terminase_6N	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	31.40 %
Unclassified	root	N/A	68.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.65 %
Unclassified	root	N/A	68.60 %
Viruses	superkingdom	All Organisms → Viruses	29.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.83 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	25.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Unclassified	root	N/A	68.60 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	25.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Unclassified	root	N/A	68.60 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Unclassified	root	N/A	68.60 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	25.62 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	25.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Unclassified	root	N/A	68.60 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	24.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Unclassified	root	N/A	68.60 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.83 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Unclassified	root	N/A	68.60 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	24.79 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000525\|JGI1221J11331_1009659	All Organisms → Viruses → Predicted Viral	2637	Open in IMG/M
3300003277\|JGI25908J49247_10150520	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300003394\|JGI25907J50239_1033105	All Organisms → Viruses → Predicted Viral	1099	Open in IMG/M
3300003499\|JGI25930J51415_1037529	Not Available	858	Open in IMG/M
3300004095\|Ga0007829_10147084	Not Available	501	Open in IMG/M
3300004481\|Ga0069718_10117176	Not Available	753	Open in IMG/M
3300005525\|Ga0068877_10644310	Not Available	572	Open in IMG/M
3300005527\|Ga0068876_10628159	Not Available	580	Open in IMG/M
3300005584\|Ga0049082_10085617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1106	Open in IMG/M
3300006111\|Ga0007848_1081408	Not Available	601	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.35%
Terrestrial	Environmental → Terrestrial	1.65%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.83%
Freshwater	Environmental → Aquatic → Freshwater	85.12%
Marine	Environmental → Aquatic → Marine	12.40%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.83%
Soil	Environmental → Terrestrial → Soil	0.83%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.83%
Coastal	Environmental → Aquatic → Marine → Coastal	10.74%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.65%
Lake	Environmental → Aquatic → Freshwater → Lake	33.06%
Lentic	Environmental → Aquatic → Freshwater → Lentic	39.67%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.83%
River	Environmental → Aquatic → Freshwater → River	4.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.48%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	37.19%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	28.10%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.74%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.44%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.83%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.09%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.13%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	33.06%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.09%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.48%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.48%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.13%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	0.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.83%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000525	Hypersaline microbial communities from Lake Vida, Antarctica - Brine Hole Two >0.2 micron	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006111	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1221J11331_10096596	3300000525	Hypersaline	MMDKKDTKQSKATAAAAVHKHERAMHKGQSMTKLAKGGKTNMQ
JGI25908J49247_101505202	3300003277	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGKTNEMM
JGI25907J50239_10331051	3300003394	Freshwater Lake	MDKADLKQDKKMMAKAVHKHEKKLHPGKPMTKLAKGGPTS
JGI25930J51415_10375293	3300003499	Freshwater Lake	MDKKDLAQDKKMIAGAVHKHEKALHKGKPMTKLKKGGVTS
Ga0007829_101470841	3300004095	Freshwater	MMAKVDKEDIKQDKKMIATAIHKHEKHDHPGKPLTKLAKGGKTNANMLKYGR
Ga0069718_101171762	3300004481	Sediment	MDKKDLKQDKATAAKAVHKHERAMHKGKPLTKMAKGGKTN
Ga0068877_106443101	3300005525	Freshwater Lake	MNKSDLKQDKKMVASAVHKHESSMHPGKPKTKLAKGGGIKMRGT
Ga0068876_106281592	3300005527	Freshwater Lake	MDKKDLKQDKATAAKAVHKHERAMHKGKPLTKMAKGGKT
Ga0049082_100856171	3300005584	Freshwater Lentic	MNDMKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGGKTN
Ga0007848_10814083	3300006111	Freshwater	MAKVDKEDIKQDKKMIATAIHKHEKHDHPGKPLTKLAKGGKT
Ga0075471_104109163	3300006641	Aqueous	MAEKHDKADIKADKKMVASAVHKHEKNMHPGKAVTKLKAGG
Ga0070749_103665561	3300006802	Aqueous	MDKKDLAQDKKMIAGAVHKHEKAKHKGAPLTKLKKGGPP
Ga0075473_102557871	3300006875	Aqueous	MDKKDLAQDKKTAAKAVHKHEKAMHPGKPMTKMRAGGKTNSDM
Ga0075473_103403223	3300006875	Aqueous	MDKKDLAQDKKMVAGAVHKHERAKHKGQPLTKLKKGGPTGMDMRKM
Ga0105746_11718443	3300007973	Estuary Water	MDKKDLAQDKKMVAGAVHKHEKKMHPGKPMTKLKAG
Ga0114343_12265431	3300008110	Freshwater, Plankton	MDKKDLAQDKKMIAGAVHKHEKAKHKGAPLTKLKKGGPTG
Ga0114347_12746112	3300008114	Freshwater, Plankton	MNKSDLKQDKKMVASAVHKHESSMHPGKPKTKLAKGGGIKMRGTG
Ga0114350_11664442	3300008116	Freshwater, Plankton	MDKKDLKQDKAMVAKAVHKHERAKHKGQPMTKLAKGGKTNAQMGAMGRN
Ga0114337_10633055	3300008262	Freshwater, Plankton	MDKADLKQDKKMVAGAVHKHEKKLHPGQPMTKLAKGGKTNLQMKKGG*
Ga0114363_11483621	3300008266	Freshwater, Plankton	MMDKKDLAQDKRMIAGAVHKHERAKHKGAPLTKLKKGGPTGEMMRKM
Ga0114876_11306083	3300008448	Freshwater Lake	MDKKDMKQDKKMVAGAVHKHEKKLHPGKPMTKLAKGGVTTDQM
Ga0114876_12671502	3300008448	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKKMHPGKPMTKLAKGGKTNEMMKSM
Ga0114880_11918631	3300008450	Freshwater Lake	MHKADMKQDKKMMAGAVHKHEKRLHPGKPMTKLAKGGKT
Ga0104242_10508873	3300008962	Freshwater	MKDGMKQDKKIAGAIHKHEKHMHPGKSMTKLRKGGLTSEMMR
Ga0114981_107819551	3300009160	Freshwater Lake	MDKADLKQDKKMIAGAVHKHEKRMHPGKPMTKLAKGGVTG
Ga0114979_104191883	3300009180	Freshwater Lake	MDKADLKQDKKMIAGAVHKHEKRMHPGKPMTKLKKGGVTGDMMK
Ga0114974_106001012	3300009183	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGK
Ga0114976_100392111	3300009184	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVTTDMMKSM
Ga0114982_12036461	3300009419	Deep Subsurface	MDKKDLAQDKKMVAGAVHKHEKKMHPGKPMTKLKK
Ga0129333_112770322	3300010354	Freshwater To Marine Saline Gradient	MDKKDLAQDKKMIAGAVHKHEKAKHPGKPLTKLAKGGKT
Ga0129333_117011802	3300010354	Freshwater To Marine Saline Gradient	MMDKKDLAQDKKMIAGAVHKHERAKHKGAPLTKLKK
Ga0129336_101281604	3300010370	Freshwater To Marine Saline Gradient	MDKKDLAQDKKMIAGAVHKHEKAKHKGQPLTKLAKGGKTNANML
Ga0133913_107292051	3300010885	Freshwater Lake	MDKEDLKQDKAMISAAVHKHEANMHKGKPMTKLKSGGSV
Ga0139557_10104482	3300011010	Freshwater	MNDMKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGGKTXXX*
Ga0157210_10406781	3300012665	Freshwater	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVTSDMM
Ga0157549_11027752	3300012732	Freshwater	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVTTDMMKVCCNGR*
Ga0164293_106888241	3300013004	Freshwater	MDKADKKQDKKMIANMVHTHEGKLHPGKPKTKFAKG
Ga0164294_109464352	3300013006	Freshwater	MDKKDLKQDKKMIAGAVHKHEKRLHPGKPITKLAKGGKTNE
Ga0181338_10135773	3300015050	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVT
Ga0181338_10667841	3300015050	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGKTNEMMMSMG
Ga0181339_10136001	3300017700	Freshwater Lake	MDKKDMKQDKKMIAGAVHKHEKKLHPGKPMTKLAK
Ga0181364_10122271	3300017701	Freshwater Lake	MDKKDLAQDKKMVAGAVHKHEKKLHPGQPMTKFAKGGKTNEQ
Ga0181363_10903712	3300017707	Freshwater Lake	MDKKDLKQDKKMIASAVHKHEAKMHPGKPMTKLAKGGVTSANMKKYGR
Ga0181350_10809021	3300017716	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKKLHLGQPMTKFAKGGKTNAHM
Ga0181362_11126832	3300017723	Freshwater Lake	MDKKDLKQDKKMMAGAVHKHEKRLHPGKPMTKLAKGGKTN
Ga0181365_10610431	3300017736	Freshwater Lake	MNDMKQDKKMVAGAVHKHEKKLHPGKPMTKLAKGGKTN
Ga0181365_11332531	3300017736	Freshwater Lake	MDKADMKQDKKRMAGAVHKHKKRLHPGKTPTKFAKGGKTDMDMMKYG
Ga0181352_10283354	3300017747	Freshwater Lake	MDKKDLAQDKKMVAGAVHKHEKKMHPGKPMTKLKAGG
Ga0181352_10795023	3300017747	Freshwater Lake	MDKADLKQDKKMIASAVHKHEAKMHPGKPMTKLKKGGVTSM
Ga0181352_11291531	3300017747	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLKKGGVTGEMMKSMG
Ga0181352_11994142	3300017747	Freshwater Lake	MDKADLKQDKKMIAGAVHKHEKKLHPGKPMTKLKKGGVTGEM
Ga0181344_10254325	3300017754	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKKMHPGQPMTKLAKGGKTNLQMKQL
Ga0181344_11406221	3300017754	Freshwater Lake	MDKKDLKQDKKMIASAVHKHEAKMHPGKPMTKLAKGGVTSANMK
Ga0181344_12153932	3300017754	Freshwater Lake	MKHDDAKADMKMDKAQDKKMIKAAVGKHEKKLHPGQPMTKLAKGGKTNLQMKQL
Ga0181344_12367982	3300017754	Freshwater Lake	MDKKDLAQDKKTAARAVHKHEAAMHPGKPMTKMRVGGKT
Ga0181344_12388882	3300017754	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLKKGGVTTDMM
Ga0181358_10754671	3300017774	Freshwater Lake	MDKKDMKQDKKMVAGAVHKHEKRLHPGKSMTKLAKGGVTTDQMKAVG
Ga0181357_10480084	3300017777	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVTTDQM
Ga0181357_10519711	3300017777	Freshwater Lake	MDKADMKQDKKIIAGAVHKHEKKLHPGKPMTKLAKGGVTTDQMKAVGR
Ga0181357_11635741	3300017777	Freshwater Lake	MDKADMKQDKKMMAGAVHKHEKRLHPGKPMTKLAKGG
Ga0181346_11272213	3300017780	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKKLHPGQPMTKFAKGGK
Ga0181346_12032861	3300017780	Freshwater Lake	MDKADLKQDKKMIAGAVHKHEKKLHPGKPMTKFAKGGKTN
Ga0181348_11428453	3300017784	Freshwater Lake	MAKHDTKQDKKMITSAVHKHERSKHPGTPLTKMAKGG
Ga0181348_12827822	3300017784	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGGKT
Ga0181355_11600603	3300017785	Freshwater Lake	MNKADMKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGG
Ga0181355_11736151	3300017785	Freshwater Lake	MDKADKKQDKKMMAGAVNKHEKRMHPGKTPTKFAQGGKTDMDMMKY
Ga0181355_13317831	3300017785	Freshwater Lake	MDKKDLKQDKKMVAGAVHKHEKALHPGKPMTKLKAGG
Ga0181563_103068343	3300018420	Salt Marsh	MDKKDLAQDKKMIAGAVHKHEKKLHPGKPMTKLKAGG
Ga0181563_106803042	3300018420	Salt Marsh	MDKKDLAQDKKMIAGAVHKHEKAKHKGQPLTKLAK
Ga0181359_12433422	3300019784	Freshwater Lake	MNDMKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGG
Ga0211734_112895343	3300020159	Freshwater	MDKADLKQDKKMMAGAVHKHEKKLHPGKPMTKLAKGGKTN
Ga0211726_108361753	3300020161	Freshwater	MDKKDLAQDKKMIAGAVHKHEKKLHPGKPMTKLRAGG
Ga0211726_109786371	3300020161	Freshwater	MDKKDMKQDKAMIAGAVHKHEKAKHKGKPLTKLAKGGKTNAQMK
Ga0214219_10325373	3300020735	Freshwater	MAKVDKEDIKQDKKMIAAAVHKHERHDHPGKPLTKL
Ga0181337_10286593	3300022173	Freshwater Lake	MAKEKGKSDMAQDKAMVKKAVGKHEKRLHPGKSLTK
Ga0181354_10861153	3300022190	Freshwater Lake	MDKADMKQDKKMVAGAVHKHEKRLHPGKPMTKLAKGGKTNEMI
Ga0214917_102468563	3300022752	Freshwater	MDKADLKQDKKMIAGAVHKHEKKMHPGKPMTKLKKG
Ga0255232_10570913	3300024558	Freshwater	MDKKDLAQDKKMVASAVHKHEARMHPGKAPTKLAKGGV
Ga0209616_10032481	3300025091	Freshwater	MDKKDLKQDKKMVAGAVHKHEKALHPGKPMTKLRAGGKTNSDMLKM
Ga0208107_10134081	3300025399	Freshwater	MAKVDKEDIKQDKKMIATAIHKHEKHDHPGKPLTKLAKGGK
Ga0208618_10139981	3300025435	Freshwater	MAKVDKEDIKQDKKMIATAIHKHEKHDHPGKPLTKLAKGGKTNANMLKYG
Ga0208147_10615383	3300025635	Aqueous	MDKKDLAQDKKMIGAAVHKHEARMHPGKAPTKLAKGGVTGK
Ga0208784_11549453	3300025732	Aqueous	MDKKDLAQDKKMIAGAVHKHEKAKHKGQPLTKLKKGGPTGM
Ga0208005_10161366	3300025848	Aqueous	MDKKDLKQDKKMIASAVHKHEAKMHPGKPMTKLAKGG
Ga0208916_101830583	3300025896	Aqueous	MDKKDLAQDKKMVAGAVHKHERAKHKGQPLTKLKKGGPTGMD
Ga0208916_105131952	3300025896	Aqueous	MDKKDLAQDKKMIAGAVHKHEKAKHKGQPLTKLAKG
Ga0255155_10740161	3300026455	Freshwater	MDKADLKQDKKMIASAVHKHEKRMHPGKPVTKLKAGGKTNS
Ga0256311_11490672	3300026565	Freshwater	MDKADLKQDKKMIASAVHKHEKNMHPGKAVTKLRAGG
Ga0255089_10256651	3300027130	Freshwater	MDKKDLKQDKKMIASAVHKHEAKMHPGKPMTKLAK
Ga0255086_10660781	3300027486	Freshwater	MDKKDLAQDKKTAARAVHKHEAAMHPGKPMTKMRAGGKTNSDMLKMGR
Ga0209442_12472231	3300027732	Freshwater Lake	MDKADMKQDKKMMAGAVHKHEKRLHPGKPMTKLAKGGKTNEMMM
Ga0209087_11259083	3300027734	Freshwater Lake	MDKADLKQDKKMMAGAVHKHEKAMHPGKPMTKLKKGGVTSMAMK
Ga0209596_13050312	3300027754	Freshwater Lake	MAKESGKSDIKQDKAMIKAMIHKHEKKAHPGKPLTKLAKG
Ga0209296_12224471	3300027759	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPLTKLAK
Ga0209296_13975872	3300027759	Freshwater Lake	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGG
Ga0209768_100940103	3300027772	Freshwater Lake	MDKKDMKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGKT
Ga0209500_101302101	3300027782	Freshwater Lake	MDKADLKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGVTT
Ga0209972_102612993	3300027793	Freshwater Lake	MDKKDLAQDKKTAASAVHKHEKAMHPGKPMTKLAK
Ga0304728_10460735	3300028393	Freshwater Lake	MAKESSKSDIKQDKAMIKAMVHKHEKHDHPGKPLTKLAKGGKTNMQM
Ga0307377_102314211	3300031673	Soil	MDKADLKQDKKMIAGAVHKHEKSMHPGKPMTKLAKGGKTNEMM
Ga0315907_112081862	3300031758	Freshwater	MDKADLKQDKKMMAGAVHKHEKRMHPGKPMTKFAKGGK
Ga0315900_105003991	3300031787	Freshwater	MDKKDLKQDKKMIAGAVHKHEKKLHPGKPMTKLRAGG
Ga0315297_112543522	3300031873	Sediment	MNKADMKQDKKMMAGAVHKHEKRLHPGKPMTKLAKGGKTNEMMMS
Ga0315904_105797951	3300031951	Freshwater	MDKKDLAQDKKTAAKAVHKHEKAMHPGKPMTKMRAGG
Ga0315904_107358661	3300031951	Freshwater	MDKKDLKQDKKMIAGAVHKHEKKLHPGQPMTKLKKGGTTSL
Ga0315904_107476041	3300031951	Freshwater	MNDMKQDKKMVAGAVHKHEKKLHPGKPMTKLAKGGK
Ga0315294_113700892	3300031952	Sediment	MNKADMKQDKKMMAGAVHEHEKKLHPGKPMTKLAK
Ga0315274_105984563	3300031999	Sediment	MNKADMKQDKKMMAGAVHKHEKKLHPGKPMTKLAK
Ga0315274_112419431	3300031999	Sediment	MDKADMKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGKTNEM
Ga0315289_107802503	3300032046	Sediment	MDKADMKQDKKMIAGAVHKHEKKLHPGKPMTKLAKGGKTN
Ga0315289_108171833	3300032046	Sediment	MDKADMKQDKKMMAGAVHKHEKSMHPGKPMTKFAKGGKTNMDMM
Ga0315905_103205681	3300032092	Freshwater	MDKKDMKQDKATVAKAVHKHERAKHKGQPLTKLAKGGKTN
Ga0316218_11110041	3300032117	Freshwater	MAKESSKSDIKQDKAMIKAMIHKHERHDHPGKPLTKFAKGGK
Ga0316231_100301325	3300032722	Freshwater	MAKESSKSDIKQDKAMIKAMIHKHERHDHPGKPLTKFAK
Ga0335035_0162674_1_120	3300034105	Freshwater	MDKADKKQDKKMIADMVHTHEGKLHPGKPKTKFAKGGKTD
Ga0335063_0128967_1361_1486	3300034111	Freshwater	MADKDMAQDKATVHKAVHKHERAMHPGKPLTKMRKGGEVGC
Ga0335066_0344457_1_150	3300034112	Freshwater	MDKKDMKQDKATAAKAVHKHERAMHKGKPLTKMAKGGKTNAQMGAMGRNL
Ga0335068_0501996_1_141	3300034116	Freshwater	MDKKDLAQDKKTAASAVHKHEKAMHPGKPMTKLAKGGKTNLQMKQLG
Ga0335017_0401900_3_140	3300034167	Freshwater	MDKADKKQDKKMIAGAVHKHEKRMHPGKTPTKFAHGGKTGEDMMKY
Ga0335065_0470040_631_756	3300034200	Freshwater	MDKKDLKQDKATAAKAVHKHERAKHKGQPLTKLAKGGKTNMQ
Ga0335013_0606078_493_639	3300034284	Freshwater	MMDKKDLAQDKKMVAGAVHKHEKAKHKGQPLTKLRKGGKTNAEMKTLGR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences