Metagenome Family F072177

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072177
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	49 residues
Representative Sequence	MDSTNRKIFWILFTILSLFGYFLPFGWAIAEMFVALFASWWIVYRSGLL
Number of Associated Samples	73
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.02 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	69.42 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.769 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (58.678 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters	d5c6na_	5c6n	0.77191
d.163.1.2: Eukaryotic DNA topoisomerase I, catalytic core	d1k4ta2	1k4t	0.73798
f.41.1.0: automated matches	d5awwy_	5aww	0.7152
a.4.9.1: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	d1whua1	1whu	0.7097
a.19.1.1: Fertilization protein	d1gaka_	1gak	0.70667

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF12900	Pyridox_ox_2	14.05
PF02954	HTH_8	8.26
PF01841	Transglut_core	4.13
PF03979	Sigma70_r1_1	3.31
PF14403	CP_ATPgrasp_2	2.48
PF10410	DnaB_bind	2.48
PF11146	DUF2905	1.65
PF08002	DUF1697	1.65
PF07470	Glyco_hydro_88	1.65
PF07973	tRNA_SAD	0.83
PF12244	DUF3606	0.83
PF04174	CP_ATPgrasp_1	0.83
PF04216	FdhE	0.83
PF00374	NiFeSe_Hases	0.83
PF09496	CENP-O	0.83
PF02518	HATPase_c	0.83
PF12704	MacB_PCD	0.83
PF13451	zf-trcl	0.83
PF07883	Cupin_2	0.83
PF11236	DUF3037	0.83
PF12697	Abhydrolase_6	0.83
PF03605	DcuA_DcuB	0.83
PF13231	PMT_2	0.83
PF01584	CheW	0.83
PF04545	Sigma70_r4	0.83
PF03952	Enolase_N	0.83
PF13620	CarboxypepD_reg	0.83
PF00072	Response_reg	0.83
PF13561	adh_short_C2	0.83
PF00196	GerE	0.83
PF00829	Ribosomal_L21p	0.83
PF11005	DUF2844	0.83
PF00383	dCMP_cyt_deam_1	0.83
PF04542	Sigma70_r2	0.83
PF00535	Glycos_transf_2	0.83
PF00355	Rieske	0.83
PF04168	Alpha-E	0.83
PF07238	PilZ	0.83
PF03237	Terminase_6N	0.83
PF13177	DNA_pol3_delta2	0.83
PF01740	STAS	0.83
PF12706	Lactamase_B_2	0.83
PF01887	SAM_HAT_N	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	4.13
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	1.65
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.83
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.83
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	0.83
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.83
COG2308	Circularly permuted ATP-grasp protein	General function prediction only [R]	0.83
COG2704	Anaerobic C4-dicarboxylate transporter	Carbohydrate transport and metabolism [G]	0.83
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.23 %
Unclassified	root	N/A	32.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.61 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	2.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.61 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005836\|Ga0074470_11511545	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300005892\|Ga0075275_1002550	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300006052\|Ga0075029_100231894	Not Available	1161	Open in IMG/M
3300006795\|Ga0075520_1231467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300009628\|Ga0116125_1184087	Not Available	589	Open in IMG/M
3300009638\|Ga0116113_1159528	Not Available	568	Open in IMG/M
3300009645\|Ga0116106_1189333	Not Available	655	Open in IMG/M
3300009650\|Ga0105857_1111330	Not Available	744	Open in IMG/M
3300009665\|Ga0116135_1038726	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300009665\|Ga0116135_1086290	Not Available	1123	Open in IMG/M
3300009665\|Ga0116135_1136934	Not Available	907	Open in IMG/M
3300009665\|Ga0116135_1312906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	622	Open in IMG/M
3300010343\|Ga0074044_10476841	Not Available	815	Open in IMG/M
3300010379\|Ga0136449_100900420	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300012207\|Ga0137381_11361979	Not Available	602	Open in IMG/M
3300014160\|Ga0181517_10000126	All Organisms → cellular organisms → Bacteria	103605	Open in IMG/M
3300014160\|Ga0181517_10001495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	25868	Open in IMG/M
3300014160\|Ga0181517_10169705	Not Available	1213	Open in IMG/M
3300014160\|Ga0181517_10192088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1121	Open in IMG/M
3300014160\|Ga0181517_10257252	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300014161\|Ga0181529_10606309	Not Available	571	Open in IMG/M
3300014167\|Ga0181528_10000006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	267002	Open in IMG/M
3300014167\|Ga0181528_10000009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	246122	Open in IMG/M
3300014169\|Ga0181531_10006293	All Organisms → cellular organisms → Bacteria → Acidobacteria	7005	Open in IMG/M
3300014200\|Ga0181526_10052901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2591	Open in IMG/M
3300014490\|Ga0182010_10377235	Not Available	771	Open in IMG/M
3300014492\|Ga0182013_10223406	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300014492\|Ga0182013_10310048	Not Available	881	Open in IMG/M
3300014493\|Ga0182016_10035021	All Organisms → cellular organisms → Bacteria	4158	Open in IMG/M
3300014493\|Ga0182016_10038344	All Organisms → cellular organisms → Bacteria	3913	Open in IMG/M
3300014493\|Ga0182016_10307875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300014496\|Ga0182011_10570677	Not Available	722	Open in IMG/M
3300014654\|Ga0181525_10426960	Not Available	729	Open in IMG/M
3300014655\|Ga0181516_10058724	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300014655\|Ga0181516_10480001	Not Available	637	Open in IMG/M
3300014658\|Ga0181519_10299611	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300014658\|Ga0181519_10912888	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300014838\|Ga0182030_10001841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	44395	Open in IMG/M
3300014838\|Ga0182030_10161407	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300014838\|Ga0182030_10255959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1993	Open in IMG/M
3300014838\|Ga0182030_10326726	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300014838\|Ga0182030_11561681	Not Available	542	Open in IMG/M
3300014838\|Ga0182030_11741559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	504	Open in IMG/M
3300014839\|Ga0182027_10448548	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300017946\|Ga0187879_10638426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300017948\|Ga0187847_10164031	Not Available	1213	Open in IMG/M
3300017948\|Ga0187847_10270178	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300017975\|Ga0187782_10328938	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300017975\|Ga0187782_10664015	Not Available	803	Open in IMG/M
3300017988\|Ga0181520_10000260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	116261	Open in IMG/M
3300017988\|Ga0181520_10000340	All Organisms → cellular organisms → Bacteria	103605	Open in IMG/M
3300017988\|Ga0181520_10000855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	65780	Open in IMG/M
3300017988\|Ga0181520_10001576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	45881	Open in IMG/M
3300017988\|Ga0181520_10029870	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300017988\|Ga0181520_10118028	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300017988\|Ga0181520_10752933	Not Available	661	Open in IMG/M
3300018035\|Ga0187875_10221533	Not Available	1039	Open in IMG/M
3300018038\|Ga0187855_10811728	Not Available	546	Open in IMG/M
3300018042\|Ga0187871_10804044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300018043\|Ga0187887_10041488	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300018043\|Ga0187887_10134892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300018046\|Ga0187851_10167505	Not Available	1322	Open in IMG/M
3300019082\|Ga0187852_1216389	Not Available	785	Open in IMG/M
3300022861\|Ga0224528_1000199	All Organisms → cellular organisms → Bacteria	50135	Open in IMG/M
3300022863\|Ga0224532_1010496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300022863\|Ga0224532_1015898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	968	Open in IMG/M
3300023088\|Ga0224555_1086202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300023247\|Ga0224529_1044586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300025987\|Ga0208906_1009423	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300027905\|Ga0209415_10526438	Not Available	901	Open in IMG/M
3300028572\|Ga0302152_10095535	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300028574\|Ga0302153_10212998	Not Available	662	Open in IMG/M
3300028779\|Ga0302266_10383314	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300028859\|Ga0302265_1264065	Not Available	507	Open in IMG/M
3300028873\|Ga0302197_10415780	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300029908\|Ga0311341_10196532	Not Available	1258	Open in IMG/M
3300029914\|Ga0311359_10398963	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300030041\|Ga0302274_10179355	Not Available	1062	Open in IMG/M
3300030225\|Ga0302196_10383677	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300030518\|Ga0302275_10018760	All Organisms → cellular organisms → Bacteria	5890	Open in IMG/M
3300030518\|Ga0302275_10031412	All Organisms → cellular organisms → Bacteria	4264	Open in IMG/M
3300031258\|Ga0302318_10192697	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300031258\|Ga0302318_10510473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031524\|Ga0302320_10012062	All Organisms → cellular organisms → Bacteria	18195	Open in IMG/M
3300031759\|Ga0316219_1011794	All Organisms → cellular organisms → Bacteria	4853	Open in IMG/M
3300031813\|Ga0316217_10000349	All Organisms → cellular organisms → Bacteria	67384	Open in IMG/M
3300031813\|Ga0316217_10003766	All Organisms → cellular organisms → Bacteria	16923	Open in IMG/M
3300032160\|Ga0311301_10921167	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300032675\|Ga0316225_1074583	Not Available	1192	Open in IMG/M
3300032677\|Ga0316227_1251913	Not Available	599	Open in IMG/M
3300032722\|Ga0316231_1358681	Not Available	554	Open in IMG/M
3300032805\|Ga0335078_11693479	Not Available	694	Open in IMG/M
3300032829\|Ga0335070_10877580	Not Available	832	Open in IMG/M
3300032892\|Ga0335081_11624793	Not Available	709	Open in IMG/M
3300032893\|Ga0335069_10469266	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300032893\|Ga0335069_10675962	Not Available	1176	Open in IMG/M
3300032893\|Ga0335069_11101371	Not Available	875	Open in IMG/M
3300032896\|Ga0335075_11602315	Not Available	535	Open in IMG/M
3300033402\|Ga0326728_10008312	All Organisms → cellular organisms → Bacteria → Acidobacteria	25880	Open in IMG/M
3300033402\|Ga0326728_10059777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5314	Open in IMG/M
3300033402\|Ga0326728_10071962	All Organisms → cellular organisms → Bacteria	4578	Open in IMG/M
3300033402\|Ga0326728_10486802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300033405\|Ga0326727_10003590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	49126	Open in IMG/M
3300033405\|Ga0326727_10250247	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300033755\|Ga0371489_0000030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	295386	Open in IMG/M
3300033755\|Ga0371489_0281692	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300034124\|Ga0370483_0000003	All Organisms → cellular organisms → Bacteria	104594	Open in IMG/M
3300034124\|Ga0370483_0162708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	753	Open in IMG/M
3300034124\|Ga0370483_0305633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300034130\|Ga0370494_013215	All Organisms → cellular organisms → Bacteria → Acidobacteria	2151	Open in IMG/M
3300034163\|Ga0370515_0000046	All Organisms → cellular organisms → Bacteria	35765	Open in IMG/M
3300034163\|Ga0370515_0001501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11703	Open in IMG/M
3300034163\|Ga0370515_0004549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6847	Open in IMG/M
3300034163\|Ga0370515_0309941	Not Available	667	Open in IMG/M
3300034199\|Ga0370514_012490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1995	Open in IMG/M
3300034199\|Ga0370514_078726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300034199\|Ga0370514_129155	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300034282\|Ga0370492_0029732	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300034282\|Ga0370492_0129477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1032	Open in IMG/M
3300034282\|Ga0370492_0230786	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300034282\|Ga0370492_0438512	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.16%
Aquatic	Environmental → Aquatic	38.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.84%
Freshwater	Environmental → Aquatic → Freshwater	37.19%
Peat	Environmental → Terrestrial → Peat	22.31%
Sediment	Environmental → Aquatic → Sediment	1.65%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	26.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.79%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	18.18%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	12.40%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.57%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	9.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.26%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	4.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.48%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.48%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025987	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0074470_115115452	3300005836	Sediment (Intertidal)	MDGTKRKIFWILLSVLSLLGYFLPFGWAVAEMFAAIFASWWLVYRSGLL*
Ga0075275_10025503	3300005892	Rice Paddy Soil	MERKMFWVIFTVLSLFGYFLPFVWAIVEMFVALIVSWWIVYRSDWI*
Ga0075029_1002318941	3300006052	Watersheds	MSDDGINKKLFWIIWTVLSLLGYFLPFGWAVVEMFVALFVSWWFVYKSGII*
Ga0075520_12314671	3300006795	Arctic Peat Soil	PYDYPQAIMDRKIFWILFTVLSCGGYFLPFGWAILEMFVSLFVSWWIVYRSGWL*
Ga0116125_11840871	3300009628	Peatland	MDSTNRKIFWLLFSVLSLGGYFLPFVWAVAEMFFALWLSWWIVYRSGLL*
Ga0116113_11595281	3300009638	Peatland	VSEDSSNRKIFWLLWTVLSLVGYFLPWGWAIGEMFAAMWLSWWIVYRSGWL*
Ga0116106_11893332	3300009645	Peatland	MDSTNRKIFWILFTVLSLLGYFLPFGWAVAEMFVALAASWWIVYRSG
Ga0105857_11113302	3300009650	Permafrost Soil	MIGDMDSTNRKIFWILFTLLSFGGYFLPFGWAVAEMFLSLFVSWWIVYRSGLL*
Ga0116135_10387262	3300009665	Peatland	MFWIIFTILSLFGYFLPFGWAVVEMFVAIFASWWIVYRSGLL*
Ga0116135_10862903	3300009665	Peatland	MDSTNRKIFWILFTVLSLFGYFLPLGWAVAEMFVALFASWWIVYRSGWL*
Ga0116135_11369342	3300009665	Peatland	MDSTNRKIFWILFTVLSLAGYFLPFVWAIVEMFFALWLSWWIVYRSGLL*
Ga0116135_13129061	3300009665	Peatland	MDSTNRKIFWILFTILSLFGYFLPFGWAIAEMFVALFASWWIVYRSGLL*
Ga0074044_104768412	3300010343	Bog Forest Soil	MDSTNRKIFWMLWTILSLLGYFLPLGWAIAETFVAMWVSWWVVYRSGLL*
Ga0136449_1009004202	3300010379	Peatlands Soil	MDHRQAKMDSTDRKIFWLLFTVLSLGGYFLPFVWGVVEVFLSLLVSWWIVYRSGWL*
Ga0137381_113619792	3300012207	Vadose Zone Soil	VDSVDRKIFWILFTILSLFGYFLPFGWAIAEMFAALILSWWIVSRSGVL*
Ga0181517_1000012635	3300014160	Bog	VDTDSTKRKVFWLLYIFLSLFAFFLPFMWGIAENLVALFVSWWLVYRTDLL*
Ga0181517_100014953	3300014160	Bog	VSADPTNRKIFWVLFTVLSLGGYFLPLAWAIAEMFLALWVAWWIVYRSGMF*
Ga0181517_101697052	3300014160	Bog	MDSVQRKIFWILWFVLSLFGYLLPFGWAVVESFVALFASWWIVYRSGWL*
Ga0181517_101920883	3300014160	Bog	MASSDRKIFWILFTVLSLGGYFLPFGWAVVEMFLSLVASWWIVYRSDWF*
Ga0181517_102572522	3300014160	Bog	MDSTNRKIFWIVFTILSLGGYFLPFGWAIAEMFVSLFVSWWVVYRSGLL*
Ga0181529_106063091	3300014161	Bog	MDSVQRKIFWILWAILSLFGYLLPFSWGVVESFVALFASWWIVYRSGWLS*
Ga0181528_1000000614	3300014167	Bog	MFARADSRRIGLTMDSTNRKIFWVLFTILSLFGYFLPFGWAVAEMFVALFASWWIVYRSGWL*
Ga0181528_10000009210	3300014167	Bog	MDSTNRKIFWILFTILSLFGYFLPFGWAVAEMFVALFASWWIVYRSGWL*
Ga0181531_100062934	3300014169	Bog	MNSTNRKIFWILFTILSLFGYFLPFGWAIAEMFVALFASWWIVYRSGLL*
Ga0181526_100529013	3300014200	Bog	DRKIFWILFTVLSLGGYFLPFGWAVVEMFLSLVASWWIVYRSDWF*
Ga0182010_103772352	3300014490	Fen	SESESESPNMDSTNRKVFWVLFTLLSLGGYFLPFGWAIAEVFLALWVSWWIVYRSGLL*
Ga0182013_102234062	3300014492	Bog	MDSTNRKIFWILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF*
Ga0182013_103100481	3300014492	Bog	MDSMNRKIFWILFTILSLFGYFLPFGWAVVEMFVALFASWWIVYRSGWL*
Ga0182016_100350214	3300014493	Bog	MDSLQRKIFWILWMILSLVGYFLPLGWAVAESFVALFVSWWIVYRSGWI*
Ga0182016_100383443	3300014493	Bog	VSDDSTNRKIFWMLWTILSLVGYFMPIGWAIAEMFVAMWVSWWIVYRSGLL*
Ga0182016_103078751	3300014493	Bog	MERKIFWILFTLLSLLGYFLPFGWAVAETFVALFASWWIVYRSGWI*
Ga0182011_105706772	3300014496	Fen	MDSTNRKVFWVLFTLLSLGGYFLPFGWAIAEVFLALWVSWWIVYRSGLL*
Ga0181525_104269601	3300014654	Bog	MDSTNRKIFWILFTILSLGGYFMPFGWAIAEMFLALFVSWWIVYRSGLL*
Ga0181516_100587241	3300014655	Bog	VSDDSTNRKIFWILWTVLSLIGYFLPFGWAIAEMFVSMWVSWWIVYRSGLL*
Ga0181516_104800011	3300014655	Bog	MDVDPINRKIFWILFTVLSLGGYFLPFGWAVAEMFLSLFVSWWVVYRSGLL*
Ga0181519_102996112	3300014658	Bog	KFFWILWTVLGLPGYFLPFGWAVAEMFAALWLSWWIVYRSGLL*
Ga0181519_109128882	3300014658	Bog	TDRKIFWILFTVLSLGGYFLPFAWAVAEMFLALFVSWWIVYRSGLL*
Ga0182030_1000184133	3300014838	Bog	MDSTNRKIFWVLFSVLSLGGYFLPFIWAVAEMFFALWLSWWIVYRSGLL*
Ga0182030_101614074	3300014838	Bog	MDSTNRKIFWILWTLLSLGGYFLPFGWAIVESFVALFASWWIVYRSGLL*
Ga0182030_102559593	3300014838	Bog	MASTDRKIFWILFTVLSLGGYFLPFGWAVVEMFLSLVASWWIVYRSDWF*
Ga0182030_103267262	3300014838	Bog	VSEDSTNRKVFWLLWTILSLAGYFLPFGWAIVEMFVALWLSWWIVYRSGML*
Ga0182030_115616811	3300014838	Bog	VSEDSTNRQIFWGLFTLLSLGGYFLPFAWAIAEMFLALWVSWWIVYRSGMF*
Ga0182030_117415592	3300014838	Bog	MDHRQATMDSTDRKIFWILFTVLSCGGYFLSLGWAIVEMFLSLIVSWWIVYRSGWL*
Ga0182027_104485482	3300014839	Fen	MDRKIFWILFSVLSCGGYFLPFGWAIVEMFVSLFVSWWIVYRSGWL*
Ga0187879_106384261	3300017946	Peatland	MASSDRKIFWILFTVLSLGGYFLPFGWAVVEMFLSLVASWWIVYRSDWF
Ga0187847_101640312	3300017948	Peatland	MDSTNRKIFWLLFTILSLGGYFLPLGWAVAEMFFALWLSWWIVYRSGLL
Ga0187847_102701781	3300017948	Peatland	MDSTNRKIFWLLFTILSLGGYFLSFGWAIVEMVFALWLSWWIVYR
Ga0187782_103289381	3300017975	Tropical Peatland	LLGVGIASTNRKLFWVLFTLLSLLGWFLPFGWAIAEMFASLVASWWFVYRSGIV
Ga0187782_106640151	3300017975	Tropical Peatland	DVGIDSTKRKFFWLVFAVLSLLGWFLPFYWAILETFVALFASWWIVYRTDLI
Ga0181520_1000026054	3300017988	Bog	MDSTNRKIFWIVFTILSLGGYFLPFGWAIAEMFVSLFVSWWVVYRSGLL
Ga0181520_1000034035	3300017988	Bog	VDTDSTKRKVFWLLYIFLSLFAFFLPFMWGIAENLVALFVSWWLVYRTDLL
Ga0181520_1000085541	3300017988	Bog	VSADPTNRKIFWVLFTVLSLGGYFLPLAWAIAEMFLALWVAWWIVYRSGMF
Ga0181520_1000157639	3300017988	Bog	MADSSNRKFFWILWTVLGLPGYFLPFGWAVAEMFAALWLSWWIVYRSGLL
Ga0181520_100298704	3300017988	Bog	MATTNSRMIESVDSTNRKIFWILFTILSLFGYFLPFAWAVAEMFLALAVSWWIVYRSDLL
Ga0181520_101180282	3300017988	Bog	MDADSSKRKIFWLLFFGLSVFGYFLPFVWGVVESFAALIVSWWLVYRTDIF
Ga0181520_107529332	3300017988	Bog	MDSVQRKIFWILWAILSLFGYLLPFSWGVVESFVALFASWWIVYRSGWLS
Ga0187875_102215331	3300018035	Peatland	VSDDSTNRKVFWLLWTILSLAGYFLPFGWAIVEMFVALWLSWWIVYRSGLL
Ga0187855_108117282	3300018038	Peatland	MDSTNRKIFWLLFTILSLGGYFLPFGWAIAEMLFALWLSWWIVYRSDLL
Ga0187871_108040441	3300018042	Peatland	QVRMDSTNRKIFWILFTLLSLLGYFLPFGWAVVEMFVALFASWWIVYRSGWL
Ga0187887_100414882	3300018043	Peatland	MDSTNRKIFWILFTILSLFGYLLPFGWAIAEMFLALFASWWIVYRSGLL
Ga0187887_101348921	3300018043	Peatland	MDSTNRKIFWLLFTVLSLGGYFLPFVWAVVEMFLALWLSWWIVYRSGLL
Ga0187851_101675051	3300018046	Peatland	VSDDSTNRKVFWLLWTILSLAGYFLPFGWAIAEMFVALFASWWIVYRS
Ga0187852_12163892	3300019082	Peatland	MDSTNRKIFWILFTILSFGGYFLPLGWAIAEMFLALVVSWWIVYRSGLL
Ga0224528_10001997	3300022861	Soil	MNSDRKIFWILCTILSLGGYFLPLGWAIAEMFLSIIVSWWIVYRSDWL
Ga0224532_10104962	3300022863	Soil	VSDDSTDRKIFWILFTVLSLGGYFLPFAWAVAEMFLALFVSWWIVYRSGLL
Ga0224532_10158982	3300022863	Soil	MDSTNRKIFWILWTLLSLGGYFLPFGWAIVESFVALFASWWIVYRSGLL
Ga0224555_10862022	3300023088	Soil	MERKFFWILFTVLSCGGYFLPFGWAIVEMFVSLFVSWWIVYRSGWL
Ga0224529_10445862	3300023247	Soil	MDSTNRKIFWILFTVLSLFGYFLPLGWAVAEMFVALFASWWIVYRSGWL
Ga0208906_10094232	3300025987	Rice Paddy Soil	MERKMFWVIFTVLSLFGYFLPFVWAIVEMFVALIVSWWIVYRSDWI
Ga0209415_105264382	3300027905	Peatlands Soil	MDSTDRKIFWLLFTVLSLGGYFLPFVWGVVEVFLSLLVSWWIVYRSGWL
Ga0302152_100955352	3300028572	Bog	MDSTNRKIFWILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF
Ga0302153_102129982	3300028574	Bog	MDSMNRKIFWILFTILSLFGYFLPFGWAVVEMFVALFASWWIVYRS
Ga0302266_103833142	3300028779	Bog	RKIFWILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF
Ga0302265_12640652	3300028859	Bog	MDSLQRKIFWILWTILSLVGYFLPLGWAVAESFVALFVSWWIVYRSGWI
Ga0302197_104157801	3300028873	Bog	PRLSMDSTNRKIFWILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF
Ga0311341_101965321	3300029908	Bog	MDSMNRKIFWILFTILSLFGYFLPFGWAVVEMFVALFASWWIVYRSGW
Ga0311359_103989633	3300029914	Bog	LGITMDSTNRKIFWILWTLLSLGGYFLPFGWAIVESFVALFASWWIVYRSGLL
Ga0302274_101793553	3300030041	Bog	MDSMNRKIFWILFTILSLFGYFLPFGWAVVEMFVALFASWWIVYRSGWL
Ga0302196_103836771	3300030225	Bog	MDSLQRKIFWILWMILSLVGYFLPLGWAVAESFVALFVSWWIVYRS
Ga0302275_100187601	3300030518	Bog	QRKIFWILWTILSLVGYFLPLGWAVAESFVALFVSWWIVYRSGWI
Ga0302275_100314121	3300030518	Bog	WILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF
Ga0302318_101926973	3300031258	Bog	APRLSMDSTNRKIFWILWTVLSLGGYFFSFGWAIVEMFVALFVSWWVVYRSGWF
Ga0302318_105104732	3300031258	Bog	SGAGNALQVSMDSTNRKIFWILFTVLSLFGYFLPLGWAVAEMFVALFASWWIVYRSGWL
Ga0302320_1001206218	3300031524	Bog	WILFTVLSLGGYFLPFAWAVAEMFLALFVSWWIVYRSGLL
Ga0316219_10117944	3300031759	Freshwater	VSDDSTDRKIFWILFTVLSLGGYFLPFAWAVAEMFVALFVSWWIVYRSGLL
Ga0316217_1000034948	3300031813	Freshwater	MERKIFWILFTLLSLLGYFLPFGWAVAETFVALFASWWIVYRSGWI
Ga0316217_1000376613	3300031813	Freshwater	MDSDSTKRKLFWLLFTVLSLVGWFLPFWWAVLEMFVALFASWWLIYRADII
Ga0311301_109211672	3300032160	Peatlands Soil	MDHRQAKMDSTDRKIFWLLFTVLSLGGYFLPFVWGVVEVFLSLLVSWWIVYRSGWL
Ga0316225_10745833	3300032675	Freshwater	VSEDSTNRKIFWLLWTVLSLGGYFLPWGWAIAEMFAAMWLSWWIVYRSGML
Ga0316227_12519132	3300032677	Freshwater	IFWLLWTVLSLGGYFLPWGWAIAEMFAAMWLSWWIVYRSGML
Ga0316231_13586811	3300032722	Freshwater	KIFWLLWTVLSLGGYFLPWGWAIAEMFAAMWLSWWIVYRSGML
Ga0335078_116934791	3300032805	Soil	MESDSTKRKLFWLLFFILSVGGYFLPFGWAVLEMFVALGASWWLVYRSEII
Ga0335070_108775802	3300032829	Soil	MGDDGINKILFWIIWTILSLLGYFLPLGWAIVEMFVALFVSWWFVYKSGII
Ga0335081_116247932	3300032892	Soil	MDSTNRKIFWLLFTVLSLGGYFLPFVWAVAEMFFALWLSWWIVYRSGLL
Ga0335069_104692663	3300032893	Soil	DDGINKILFWIIWTILSLLGYFLPLGWAIVEMFVALFVSWWFVYKSGII
Ga0335069_106759622	3300032893	Soil	MGGDGINKKLFWIIWTILSLLGYFLPLGWAIVEMFVALFVSWWFVYKSGI
Ga0335069_111013711	3300032893	Soil	MDATKRKLFWLLFFVLSLFGYFLPFGWAVLESFVALFASWWLVYRSNIF
Ga0335075_116023152	3300032896	Soil	MERKMFWILFTVLSLLGYFLPFGWAVAEMFVALFASWWIVYRSGWI
Ga0326728_1000831217	3300033402	Peat Soil	MDSDSTDRKIFWLLFAFLSLFAWFLPFVWGVVETLVALVASWWIVYRSGLL
Ga0326728_100597774	3300033402	Peat Soil	MDSTNRKIFWILFTILSLGGYFLSFGWAVAEMFVSLFVSWWVVYRSGLL
Ga0326728_100719622	3300033402	Peat Soil	MDSTSRKIFWILFGVLSLIGYFLPFGWAIAEMFVALWASWWIVYRSGWL
Ga0326728_104868021	3300033402	Peat Soil	LGTDSTKRKIFWLLFTVLSLVGWFLPLGWAILETFLALFASWWLVYRSDII
Ga0326727_1000359044	3300033405	Peat Soil	VSADPTNRKIFWVLFTVLSLGGYFLPFAWAIAEMFLALWVAWWIVYRSGMF
Ga0326727_102502474	3300033405	Peat Soil	MDSTDRKIFWILFTVLSCGGYFLPLGWAIVEMFLSLIVSWWIVYRSGWL
Ga0371489_0000030_183833_183982	3300033755	Peat Soil	MDSLKRKIFWILFTLLSALGYFLPLGWAVLEMFVALFASWWIVYRSEWI
Ga0371489_0281692_502_657	3300033755	Peat Soil	MDVDPIKRKVFWLLFAVLSLFGWYLPFGWAVLENFVALVASWWLVYRSDLL
Ga0370483_0000003_39007_39156	3300034124	Untreated Peat Soil	MDSANRKIFWILFTILGLFGYFLPFGWAIAEMFLALFLSWWIVYRSGLL
Ga0370483_0162708_258_407	3300034124	Untreated Peat Soil	MDSTDRKIFWVLFTILSLLGYFLPLGWAIAEMFVALFASWWIVYRSGLL
Ga0370483_0305633_1_123	3300034124	Untreated Peat Soil	WILFTILSLFGYFLPLGWAIAEMFVALFASWWIVYRSGLL
Ga0370494_013215_1224_1373	3300034130	Untreated Peat Soil	MDSTNRKIFWVLFTILSLFGYLLPFGWAVAEMFVALFASWWIVYRSGWL
Ga0370515_0000046_22729_22878	3300034163	Untreated Peat Soil	MDSTNRKIFWILFTILSLFGYLLPLGWAIAEMFLALVVSWWIVYRSDLL
Ga0370515_0001501_5488_5637	3300034163	Untreated Peat Soil	MDSTNRKIFWLIFTVLSFGGYFLPFGWAIAEMFFALWLSWWVVYRSGLL
Ga0370515_0004549_1524_1673	3300034163	Untreated Peat Soil	MDSTNRKIFWLLFSVLSLGGYFLPFVWAVAEMFFALWLSWWIVYRSGLL
Ga0370515_0309941_82_222	3300034163	Untreated Peat Soil	MERKIFWILFTLLSLLGYFLPFGWAVAEMFVALFGSWWIVYRSGWI
Ga0370514_012490_1678_1827	3300034199	Untreated Peat Soil	MDSTNRKIFWILFTVLSLFGYFLPLGWAIAEMFVALFASWWIVYRSGLL
Ga0370514_078726_3_179	3300034199	Untreated Peat Soil	LAVSWQQGRSDFMERKYFWIIFTLLSLLGYFLPFGWAVAETFVALFASWWIVYRSGWI
Ga0370514_129155_210_359	3300034199	Untreated Peat Soil	MDCMERKLFWILFTLLSLLGYFLPFGWAVAETFVALFASWWIVYRSGWI
Ga0370492_0029732_867_1016	3300034282	Untreated Peat Soil	MDSTNRKIFWILFTILSLGGYFLPFGWAIAEMFVSLFVSWWVVYRSGLL
Ga0370492_0129477_143_292	3300034282	Untreated Peat Soil	MDSTNRKIFWVLFTILSLFGYFLPFGWAVAEMFVALFASWWIVYRSGWL
Ga0370492_0230786_283_435	3300034282	Untreated Peat Soil	MDSANRKIFWILFSVLSLFGYFLSFGWAVVEMFVALFASWWIVYRSGLLQ
Ga0370492_0438512_389_529	3300034282	Untreated Peat Soil	TNRKIFWILWTLLSLGGYFLPFGWAIVESFVALFASWWIVYRSGLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072177

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences