Metagenome / Metatranscriptome Family F072077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072077
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	36 residues
Representative Sequence	MMFFFSNRLGCMGSLLVSAIGTLILLLILGVINLN
Number of Associated Samples	68
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	13.22 %
% of genes from short scaffolds (< 2000 bps)	71.90 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.298 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand (43.802 % of family members)
Environment Ontology (ENVO)	Unclassified (43.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.463 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.92% β-sheet: 0.00% Coil/Unstructured: 65.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03631	Virul_fac_BrkB	9.92
PF00296	Bac_luciferase	4.13
PF13417	GST_N_3	3.31
PF13742	tRNA_anti_2	2.48
PF08241	Methyltransf_11	2.48
PF02353	CMAS	2.48
PF01258	zf-dskA_traR	1.65
PF00226	DnaJ	1.65
PF13560	HTH_31	1.65
PF09335	SNARE_assoc	1.65
PF05222	AlaDh_PNT_N	1.65
PF01734	Patatin	1.65
PF14325	DUF4383	1.65
PF02073	Peptidase_M29	0.83
PF04002	RadC	0.83
PF01850	PIN	0.83
PF00067	p450	0.83
PF00004	AAA	0.83
PF02535	Zip	0.83
PF02517	Rce1-like	0.83
PF00990	GGDEF	0.83
PF10282	Lactonase	0.83
PF02643	DUF192	0.83
PF00361	Proton_antipo_M	0.83
PF07311	Dodecin	0.83
PF13557	Phenol_MetA_deg	0.83
PF04545	Sigma70_r4	0.83
PF07366	SnoaL	0.83
PF04069	OpuAC	0.83
PF06831	H2TH	0.83
PF13579	Glyco_trans_4_4	0.83
PF04024	PspC	0.83
PF04542	Sigma70_r2	0.83
PF09423	PhoD	0.83
PF12680	SnoaL_2	0.83
PF00107	ADH_zinc_N	0.83
PF07228	SpoIIE	0.83
PF08281	Sigma70_r4_2	0.83
PF04343	DUF488	0.83
PF13489	Methyltransf_23	0.83
PF06968	BATS	0.83
PF05239	PRC	0.83
PF03795	YCII	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	9.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	4.13
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	2.48
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	2.48
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	2.48
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.65
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.65
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	1.65
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.65
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.65
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.65
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.65
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.83
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.83
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.83
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83
COG2124	Cytochrome P450	Defense mechanisms [V]	0.83
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.83
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.12 %
Unclassified	root	N/A	14.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.12 %
Unclassified	root	N/A	14.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.30 %
Unclassified	root	N/A	14.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.55 %
Unclassified	root	N/A	14.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.44 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.55 %
Unclassified	root	N/A	14.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.44 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.83 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	28.93 %
Unclassified	root	N/A	14.88 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	6.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.31 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14.05 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	5.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	5.79 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	4.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.65 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.88 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	5.79 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	4.96 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.96 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4.13 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	3.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.65 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.83 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.88 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	5.79 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4.96 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4.13 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.31 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	2.48 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.65 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.83 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.88 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	5.79 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4.13 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.31 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.48 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	2.48 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.65 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.83 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.83 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.88 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	5.79 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4.13 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.31 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.48 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	2.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.65 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.83 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.83 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.83 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.83 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111000\|2209951407	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300000956\|JGI10216J12902_116460699	Not Available	606	Open in IMG/M
3300004093\|Ga0065178_100105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	106477	Open in IMG/M
3300006844\|Ga0075428_100316562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1677	Open in IMG/M
3300006846\|Ga0075430_101354906	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006854\|Ga0075425_102978662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	518	Open in IMG/M
3300006876\|Ga0079217_10015856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2552	Open in IMG/M
3300007004\|Ga0079218_10003233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	6674	Open in IMG/M
3300007790\|Ga0105679_10923167	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300009083\|Ga0105047_10125811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3132	Open in IMG/M
3300009147\|Ga0114129_10944846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1089	Open in IMG/M
3300009148\|Ga0105243_12018067	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009789\|Ga0126307_10005011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9242	Open in IMG/M
3300009789\|Ga0126307_10028560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4277	Open in IMG/M
3300009789\|Ga0126307_10107297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	2216	Open in IMG/M
3300009789\|Ga0126307_10212947	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300009789\|Ga0126307_10365867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300009789\|Ga0126307_10961450	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009840\|Ga0126313_10528151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	947	Open in IMG/M
3300010038\|Ga0126315_10509601	Not Available	768	Open in IMG/M
3300010039\|Ga0126309_10006087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	4708	Open in IMG/M
3300010039\|Ga0126309_10203100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1098	Open in IMG/M
3300010040\|Ga0126308_10356390	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300010040\|Ga0126308_10499845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300010041\|Ga0126312_11391805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300010044\|Ga0126310_10161798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300010166\|Ga0126306_11463981	Not Available	566	Open in IMG/M
3300012042\|Ga0136627_1007249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4268	Open in IMG/M
3300012042\|Ga0136627_1144749	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300012043\|Ga0136631_10068818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1331	Open in IMG/M
3300012043\|Ga0136631_10069201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1327	Open in IMG/M
3300012043\|Ga0136631_10367453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	580	Open in IMG/M
3300012045\|Ga0136623_10000525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	11613	Open in IMG/M
3300012045\|Ga0136623_10002388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6812	Open in IMG/M
3300012046\|Ga0136634_10160350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300012091\|Ga0136625_1060185	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300012091\|Ga0136625_1089464	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300012091\|Ga0136625_1122485	Not Available	902	Open in IMG/M
3300012091\|Ga0136625_1233630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300012092\|Ga0136621_1014223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3269	Open in IMG/M
3300012093\|Ga0136632_10123690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1194	Open in IMG/M
3300012093\|Ga0136632_10282785	Not Available	748	Open in IMG/M
3300012093\|Ga0136632_10468444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300012094\|Ga0136638_10012728	All Organisms → cellular organisms → Bacteria	3022	Open in IMG/M
3300012094\|Ga0136638_10016649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2722	Open in IMG/M
3300012094\|Ga0136638_10472661	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012183\|Ga0136624_1107711	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300012184\|Ga0136610_1257518	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012186\|Ga0136620_10005037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6242	Open in IMG/M
3300012186\|Ga0136620_10007771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5072	Open in IMG/M
3300012186\|Ga0136620_10393687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300012187\|Ga0136622_10119176	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012187\|Ga0136622_10430573	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012187\|Ga0136622_10470355	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012188\|Ga0136618_10012435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3744	Open in IMG/M
3300012188\|Ga0136618_10111802	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300012188\|Ga0136618_10213296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300012188\|Ga0136618_10216615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	830	Open in IMG/M
3300012188\|Ga0136618_10340546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300012188\|Ga0136618_10436391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300012529\|Ga0136630_1194331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300012531\|Ga0136640_10003667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6347	Open in IMG/M
3300012531\|Ga0136640_10151630	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300012678\|Ga0136615_10275959	Not Available	748	Open in IMG/M
3300012679\|Ga0136616_10347558	Not Available	674	Open in IMG/M
3300012680\|Ga0136612_10022209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3166	Open in IMG/M
3300012680\|Ga0136612_10058299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1940	Open in IMG/M
3300012680\|Ga0136612_10064808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1838	Open in IMG/M
3300012680\|Ga0136612_10266448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300012680\|Ga0136612_10643304	Not Available	537	Open in IMG/M
3300012682\|Ga0136611_10019433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4843	Open in IMG/M
3300012682\|Ga0136611_10062714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2643	Open in IMG/M
3300012684\|Ga0136614_10179622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1599	Open in IMG/M
3300012684\|Ga0136614_10239554	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300013011\|Ga0169967_1024612	Not Available	1202	Open in IMG/M
3300015162\|Ga0167653_1016395	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300015165\|Ga0167628_1095731	Not Available	520	Open in IMG/M
3300017787\|Ga0183260_10447833	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300017789\|Ga0136617_10216248	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300017789\|Ga0136617_10269869	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300017789\|Ga0136617_10303966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300018432\|Ga0190275_11163662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	846	Open in IMG/M
3300018432\|Ga0190275_11189674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300018432\|Ga0190275_11762034	Not Available	698	Open in IMG/M
3300018432\|Ga0190275_11979789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300018432\|Ga0190275_13163583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	533	Open in IMG/M
3300018432\|Ga0190275_13596571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	502	Open in IMG/M
3300018465\|Ga0190269_10138106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300018465\|Ga0190269_11948643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	509	Open in IMG/M
3300018466\|Ga0190268_10117915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1278	Open in IMG/M
3300018469\|Ga0190270_10199079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1691	Open in IMG/M
3300018469\|Ga0190270_10309321	Not Available	1413	Open in IMG/M
3300018469\|Ga0190270_10625336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1054	Open in IMG/M
3300018469\|Ga0190270_11727449	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300018920\|Ga0190273_11217632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	642	Open in IMG/M
3300019377\|Ga0190264_10007169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3088	Open in IMG/M
3300019377\|Ga0190264_10192195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1113	Open in IMG/M
3300019884\|Ga0193741_1006321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3155	Open in IMG/M
3300027637\|Ga0209818_1007453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2150	Open in IMG/M
3300027638\|Ga0208612_1002616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	7239	Open in IMG/M
3300027638\|Ga0208612_1150022	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	573	Open in IMG/M
3300027886\|Ga0209486_10006899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	4976	Open in IMG/M
3300030502\|Ga0268258_10180919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	523	Open in IMG/M
3300031058\|Ga0308189_10337391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300031548\|Ga0307408_100014016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	5325	Open in IMG/M
3300031731\|Ga0307405_10210723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1418	Open in IMG/M
3300031852\|Ga0307410_11566308	Not Available	582	Open in IMG/M
3300032005\|Ga0307411_10897209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	787	Open in IMG/M
3300032080\|Ga0326721_10706416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	624	Open in IMG/M
3300032080\|Ga0326721_10830823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300034009\|Ga0334944_005911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2350	Open in IMG/M
3300034175\|Ga0334939_0065792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1136	Open in IMG/M
3300034175\|Ga0334939_0321589	Not Available	514	Open in IMG/M
3300034268\|Ga0372943_0001829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10422	Open in IMG/M
3300034268\|Ga0372943_0372252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300034377\|Ga0334931_008156	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300034377\|Ga0334931_061776	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	46.28%
Terrestrial	Environmental → Terrestrial	44.63%
Plants	Host-Associated → Plants	8.26%
Microbial	Host-Associated → Microbial	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.28%
Soil	Environmental → Terrestrial → Soil	43.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.44%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.83%
Bacteria	Host-Associated → Microbial → Bacteria	0.83%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.83%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	46.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.44%
Sand	Environmental → Terrestrial → Soil → Sand	2.48%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.83%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified	0.83%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	45.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.13%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.48%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.65%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.65%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	43.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.31%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.48%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	1.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.65%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.65%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.83%
Cyanobacterial	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Cyanobacterial	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004093	Cyanobacterial communities from the Joint Genome Institute, California, USA - FECB-22 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013011	Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015165	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3A, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300030502	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034175	Biocrust microbial communities from Mojave Desert, California, United States - 35SMC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2210111364	2209111000	Soil	AGAAMMFFFSNRLGCGGSLLVSLVGTLLLLLILGVVDF
JGI10216J12902_1164606991	3300000956	Soil	VATVFVFFSNRLGCMGSLAVSAVATLVLLLLFGVFDGGGN*
Ga0065178_10010561	3300004093	Cyanobacterial	MFLFFSNRLGCGGSLLVSLVITAILLIIFVFDLPPLGPA*
Ga0075428_1003165622	3300006844	Populus Rhizosphere	MFFFSNRLGCMGSLVVSAIGTLILLLILGVINIS*
Ga0075430_1013549062	3300006846	Populus Rhizosphere	MFFFSNRMGCMGSLVVSAIGTLILLLILGVVDVN*
Ga0075425_1029786622	3300006854	Populus Rhizosphere	LFVFFSSRFGCLLSLLVSVIGTLLLLLLLGWIRL*
Ga0079217_100158564	3300006876	Agricultural Soil	VLFFFSNRLGCAGSLVVSAIGTLILLLVIGVININ*
Ga0079216_115932041	3300006918	Agricultural Soil	MVFFSSGLGCLGSLLVSVIATLVLLMVFGVIHVG*
Ga0079218_100032336	3300007004	Agricultural Soil	VLFFFANRLRCAGSLVVSAIGTLILLLVIGVININ*
Ga0105679_109231672	3300007790	Soil	MMVFFSNRLGCLGSLAITVIGTLLLLLILGVINFD*
Ga0105047_101258113	3300009083	Freshwater	VVVLFFFSNRLGCLPSILLSVVLTAILLLVLGLL*
Ga0114129_109448462	3300009147	Populus Rhizosphere	MFFFSNRLGCMGSLVVSAIGTLILLLILGVINLG*
Ga0105243_120180671	3300009148	Miscanthus Rhizosphere	MLFFFSNRLGCMGSLLVSVLGTLLLLALLGIVNLH*
Ga0126307_100050113	3300009789	Serpentine Soil	VFVFFSNRLGCMGSILASLVGTLFLLLLLGVINLN*
Ga0126307_100285603	3300009789	Serpentine Soil	VFVFFSNRLGCMGSIVASLVGTLFLLLLLGVINLT*
Ga0126307_101072972	3300009789	Serpentine Soil	MFVFFSNRLGCMGSILASLVGTLCLLLLLGVINLN*
Ga0126307_102129473	3300009789	Serpentine Soil	MMFFFSNRLGCVGSLVASAIGTLILLLILGVVNLN*
Ga0126307_103658673	3300009789	Serpentine Soil	MFVFFSNRLGCMGSILASLAGTLFLLLLLGVINLD*
Ga0126307_109614502	3300009789	Serpentine Soil	MFVFFSNRLGCMGSILVSLVGTLFVLLLLGVINLN*
Ga0126313_105281512	3300009840	Serpentine Soil	VFFFFSNRLGCMGSIVASLVGTLFLLLLLGVINLN*
Ga0126315_105096011	3300010038	Serpentine Soil	MMFFFSNRLGCMGSLVASAIGTLILLLILGVVNLN*
Ga0126309_100060872	3300010039	Serpentine Soil	MMFFFSNRLGCMGSLLVSAIGTLMLLLILGVVNLS*
Ga0126309_102031001	3300010039	Serpentine Soil	MFFFSNRLGCMGSIMVSLVGTLFLLLLLGVINLR*
Ga0126308_103563902	3300010040	Serpentine Soil	MFVFFSNRLGCMGSILVSLVGTLIVLLLIGVINVR*
Ga0126308_104998452	3300010040	Serpentine Soil	VFVFFSNRLGCMGSILASLAGTLLLLLLLGVINLN*
Ga0126312_113918052	3300010041	Serpentine Soil	MMFFFSNRLGCMGSLLVSAIGTLILLLILGVINLN*
Ga0126310_101617981	3300010044	Serpentine Soil	VFFFFSNRLGCMGSVVASLVGTLFLLLLLGVINLN*
Ga0126306_114639812	3300010166	Serpentine Soil	MFFFFSNRLGCMGSLVASLIGTLFLLLLLGVINLN
Ga0136627_10072493	3300012042	Polar Desert Sand	VFLFSNRLGCLGSILISIVGTVILLALLGVIRLF*
Ga0136627_11447492	3300012042	Polar Desert Sand	MMFFFSNRLGCAGSILVSVIGTLLLLVLVGLINL*
Ga0136631_100688182	3300012043	Polar Desert Sand	MFFFASNRLGCGGSILVSLIGTLVLLLILGVVDL*
Ga0136631_100692012	3300012043	Polar Desert Sand	VFFFSNRLGCLGSLLISVVATLLLLLVLGGINLD*
Ga0136631_103674531	3300012043	Polar Desert Sand	VFLFASNRLGCGASILVSLIGTLVLLLILGVINID*
Ga0136623_100005255	3300012045	Polar Desert Sand	MFFFSNRLGCLGSLAVSVVATLVLLLVLGVINLD*
Ga0136623_100023882	3300012045	Polar Desert Sand	VFFFSNRLGCLGSLLISVVATLLLLLVLGVINLD*
Ga0136634_101603502	3300012046	Polar Desert Sand	VFLFASNRLGCGGSILVSLIGTLVLLLILGVINID*
Ga0136625_10601851	3300012091	Polar Desert Sand	VFVFFSNRLGCMGSLVVSAIATLILLLLFGVIDFGGGR*
Ga0136625_10894643	3300012091	Polar Desert Sand	MFFFSNRLGCLTSLLISVVGTLLLLLVLGVINLD*
Ga0136625_11224852	3300012091	Polar Desert Sand	MMVFFSNGLGCAGSILVSVVGTLLLLVLVGLINL*
Ga0136625_12336302	3300012091	Polar Desert Sand	MFFFSNRLRCGGSILVSLIGTLILLLVLGVINID*
Ga0136621_10142234	3300012092	Polar Desert Sand	MFFFSNRLGCLGSLLISVVATLLLLLVLGVINLD*
Ga0136632_101236902	3300012093	Polar Desert Sand	VFFFASNRLGCGGSILVSLIGTLLLLLLLGVVDL*
Ga0136632_102827852	3300012093	Polar Desert Sand	VFVFFSNRLGCGPSILISLGVTVLLLLLTGIIRIG*
Ga0136632_104684442	3300012093	Polar Desert Sand	MFFFSNRLGCGGSILVSLVCTLILLLVLGVINID*
Ga0136638_100127283	3300012094	Polar Desert Sand	LFFFSNRLGCVSSIVVSLIGTVVLLLVLGIISID*
Ga0136638_100166493	3300012094	Polar Desert Sand	SALMFFFSNRLGCGGSILVSIIGTLVLLLVLGVVDF*
Ga0136638_104726611	3300012094	Polar Desert Sand	MFFFSNRLGCGGSILVSLIGTLILLLVLGVINID*
Ga0136638_105373662	3300012094	Polar Desert Sand	VFFFSSRMGCAGSLLVSVVGTLLLLLILGVINID*
Ga0136624_11077112	3300012183	Polar Desert Sand	VFFFFSTRLGCLGSLALSIGLTLLLLLVLGVIQL*
Ga0136610_10963311	3300012184	Polar Desert Sand	LYSWRPVFFFSNRLGCLGSLLISVVATLLLLLVLGGINLD*
Ga0136610_12575182	3300012184	Polar Desert Sand	MFFFSNRLGCLGSILVSVVATLLLLLVLGVINFN*
Ga0136620_100050372	3300012186	Polar Desert Sand	MFAFYSNRLGCMGSLLVSAAVTVVLLLIFGVIDFN*
Ga0136620_100077715	3300012186	Polar Desert Sand	VFVFFSNRLGCMGSLLVSAAATLLLLVLFGVIDFGGGR*
Ga0136620_103936872	3300012186	Polar Desert Sand	MFFFSNRLGCLGSLLVSAVGTLVLLLIFGVISLD*
Ga0136622_101191761	3300012187	Polar Desert Sand	VFVFFSNRLGCMGSLVVSAIATLILLLLFGAIDFGGGR*
Ga0136622_104305731	3300012187	Polar Desert Sand	MFVFFSNRLGCMGSLLVSLVASVILLLLFGVIDLGGG
Ga0136622_104703552	3300012187	Polar Desert Sand	MFVFFSNRLGCMGSLLVSLAASVILLLLFGVIDLGGGN*
Ga0136618_100124351	3300012188	Polar Desert Sand	APNGVGRAAVMFFFSNRLGCGGSILVSLVGTLVLLLLFGVIDL*
Ga0136618_101118022	3300012188	Polar Desert Sand	MFVFFSNRLGCMGSLLVSLVASVILLLLFGVIDLGGGN*
Ga0136618_102132961	3300012188	Polar Desert Sand	MFFFASNRLGCGGSILVSVIGTLLLLLLLGVVDL*
Ga0136618_102166151	3300012188	Polar Desert Sand	VFFFSNRLGCLGSILISIVGTVIVLALLGVIRLF*
Ga0136618_103405461	3300012188	Polar Desert Sand	MRVEPPAVFLFFTNRLGCVGSLLISVIGTLILLLVLGI
Ga0136618_104363912	3300012188	Polar Desert Sand	MFFFSNRLGCGGSILVSLVGTLILLLVLGVINID*
Ga0136630_11943313	3300012529	Polar Desert Sand	VFFFFSNRLGCLGSLALSIGLTLLLLLVLGVIQL*
Ga0136640_100036675	3300012531	Polar Desert Sand	VFLFSNRLGCLGSILLSIVGTVILLALLGVIRLF*
Ga0136640_101516301	3300012531	Polar Desert Sand	IAGLMFFFSNKMGCLGSLAVSVVGTLLLLLVLGVFNN*
Ga0136615_102759593	3300012678	Polar Desert Sand	LMFFFSNRLGCAGSLAVSAIGTLLLLLVLGVIDLS*
Ga0136616_103475582	3300012679	Polar Desert Sand	MFFFSNRLGCGGSILVSLIGTLVLLLILGVINID*
Ga0136612_100222094	3300012680	Polar Desert Sand	MFFFSNRLGCLGSLLVSVIGTLLLLVVLGVINLD*
Ga0136612_100582993	3300012680	Polar Desert Sand	VFFFSNRLGCGGSILVSLIGTLILLLVLGVINTD*
Ga0136612_100648083	3300012680	Polar Desert Sand	MFFFSNRLGRGGSVRVSLVGTLLLLLLILGVIDF*
Ga0136612_102664481	3300012680	Polar Desert Sand	MFFFSNRLGCMGSLLLSAGITLVLLLLFGVLDTN*
Ga0136612_106433042	3300012680	Polar Desert Sand	MFFFASNRLGCGGSILVSVIGTLLLLLLLSVVDL*
Ga0136611_100194332	3300012682	Polar Desert Sand	MFFFSNRMGCLGSLVVSVIGTLLLLLVLGVLELR*
Ga0136611_100627143	3300012682	Polar Desert Sand	MFFFSNRMGCLKSLLISAVATALLLLAFGVIQLPGRW*
Ga0136614_101796221	3300012684	Polar Desert Sand	GVTLRAMMFFFSNRLGCAGSILVSVIGSLLLLVLVGLINL*
Ga0136614_102395544	3300012684	Polar Desert Sand	MRPGVFFFSNRLGCAGSIFVSLVGTVLLLLVLGFI
Ga0169967_10246122	3300013011	Rock	MMFFFSNRLGCLGSILVSVIGTLVLLVVLGVIRLD*
Ga0167653_10163953	3300015162	Glacier Forefield Soil	VFFFFSNRLGCMGSLLLSLGLTLLLLLLTGAIRLH*
Ga0167628_10957312	3300015165	Glacier Forefield Soil	MFFFSNRLGCGKSLLITIVGTLILLLVLGVIRLPGH*
Ga0183260_104478332	3300017787	Polar Desert Sand	VLVFFSNRLGCLGSIVVSVVAPVVLHELLGVIQLN
Ga0136617_102162482	3300017789	Polar Desert Sand	MFVFFSNRLGCMGSLLVSLIASVILLLLFGVIDLGGGN
Ga0136617_102698693	3300017789	Polar Desert Sand	LFLFFSNRSGCLGSIVVSVIGTLILLLILGVFNSN
Ga0136617_103039662	3300017789	Polar Desert Sand	VLVFFSNRLGCLGSIVVSVIATVVLLVLLGVIQLN
Ga0190275_111636622	3300018432	Soil	VFVFFSNRLGCMGSIVASLVGTLFLLLLLGVINLN
Ga0190275_111896742	3300018432	Soil	MFAFYSNRLGCMGSLLLSIAVTAVLLLILGVINFD
Ga0190275_117620342	3300018432	Soil	LPGAVLLLFSNRLGCGGSLLLSLVGTLLLLLILGVVDL
Ga0190275_119797892	3300018432	Soil	MFLFFSNRLGCMGSLLLSLVITAVLLLALGVIQLD
Ga0190275_131635832	3300018432	Soil	MFFFSNRVGCFKSLLISAVATIVLLLVLGVIRLPG
Ga0190275_135965712	3300018432	Soil	MFVFFSNRLGCMGSLLISAAVTVVLLLLLGVLGGN
Ga0190269_101381063	3300018465	Soil	LFVFFSNRLGCMGSILASLAGTLLLLLLLGVINLN
Ga0190269_119486432	3300018465	Soil	VFVFFSNRLGCMGSIMASLVGTLILLLLLGVINLN
Ga0190268_101179152	3300018466	Soil	VFVFFSNRLGCMGSIMASLVGTLILLLLLGVINLD
Ga0190270_101990792	3300018469	Soil	VFVFFSNRLGCMGSLLLSAGVTFVLLILFGVIDAS
Ga0190270_103093211	3300018469	Soil	VFVFFSNRLGCMGSILASLVGTLFLLLLLGVINLN
Ga0190270_106253362	3300018469	Soil	VFVFFSNRLGCMGSIIASLVGTLFLLLLLGVINLN
Ga0190270_117274492	3300018469	Soil	VFVFFSNRLGCMGSLLVSAAATLVLLLLFGVIDLGGN
Ga0190273_112176321	3300018920	Soil	MFAFYSNRLGCMGSLLVSLAATALLLLILGVIDFN
Ga0190264_100071696	3300019377	Soil	LFLFFSNRSGCLGSIVVSVIGTLILLLLLGVFNSN
Ga0190264_101921951	3300019377	Soil	QRNPVFLFFSNRSGCLGSIAISLIGTLILLLVLGVFD
Ga0193741_10063215	3300019884	Soil	MGPAVFVFFSNRLGCMGSIIASLVGTLVLLLLLGVINLN
Ga0196964_101725792	3300020202	Soil	LSKAAHCWRPALFFMFSNRLGCLSSLLISAVGTVLLLFALGWINL
Ga0209818_10074532	3300027637	Agricultural Soil	VLFFFSNRLGCAGSLVVSAIGTLILLLVIGVININ
Ga0208612_10026162	3300027638	Polar Desert	VFVFFSNRLGCMGSLLVSAAATLLLLVLFGAIDFGGGR
Ga0208612_11500222	3300027638	Polar Desert	AAVMFFFSNRLGCGGSILVSLVGTLVLLLLFGVIDL
Ga0209486_100068995	3300027886	Agricultural Soil	VLFFFANRLRCAGSLVVSAIGTLILLLVIGVININ
Ga0268258_101809191	3300030502	Agave	SKALFFFFSNRLGCLGSIAITVIGTLILLMVLGLL
Ga0308189_103373911	3300031058	Soil	LVFFFSNRLGCLGSILFSVIGTLVLLALTGAMRLF
Ga0307408_1000140167	3300031548	Rhizosphere	MFFFSNRFGCLKSLLISIVGTFVLLLVLGVIRLPGGSG
Ga0307405_102107233	3300031731	Rhizosphere	MFFFSNRFGCLKSLLISVVGTLVLLLVLGVIRLPGGSG
Ga0307410_115663081	3300031852	Rhizosphere	MFAIFSNRLGCMGSLIVSAIGTLLLLLLTGVLRFD
Ga0307411_108972092	3300032005	Rhizosphere	MFFFSNRFGCLKSLLISLVGTLVLLLVLGVIKLPGGSG
Ga0326721_107064162	3300032080	Soil	MFVFFSNRLGCMGSIVASLIGTLFLLLLLGVINLN
Ga0326721_108308232	3300032080	Soil	MMFFFSNRLGCMGSLLVSAIGTLILLLVLGVINTN
Ga0334944_005911_1392_1508	3300034009	Sub-Biocrust Soil	VLAAVMFFFSNRLGCGGSLLVSLVGTLLLLLLFGVIDL
Ga0334939_0065792_864_974	3300034175	Biocrust	MFFFSNRIGCFKSLLISAVATILLLLVLGVIQLPGR
Ga0334939_0321589_359_469	3300034175	Biocrust	MFFFSNRIGCFKSLLISAVATILLLLVLGVIRLPGR
Ga0372943_0001829_8297_8404	3300034268	Soil	MFFFFSNRLGCLGSIVVSLVVTAILLLALGVIRTH
Ga0372943_0372252_433_543	3300034268	Soil	MFFFSNRLGCAWSLLISAGATLLLLWLFGVIRLPGH
Ga0334931_008156_1545_1652	3300034377	Sub-Biocrust Soil	VFVFFSNRLGCGGSLMLSLVVTAILLLVTGVIRVH
Ga0334931_061776_287_394	3300034377	Sub-Biocrust Soil	VFFFFSNRLGCMGSLVLSLVVTAILLLATGVLRLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences