NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072056

Metagenome / Metatranscriptome Family F072056

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072056
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 86 residues
Representative Sequence MTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNL
Number of Associated Samples 104
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 63.25 %
% of genes near scaffold ends (potentially truncated) 40.50 %
% of genes from short scaffolds (< 2000 bps) 82.64 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.116 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(9.917 % of family members)
Environment Ontology (ENVO) Unclassified
(41.322 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.504 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.05%    β-sheet: 0.00%    Coil/Unstructured: 55.95%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF04392ABC_sub_bind 6.61
PF01902Diphthami_syn_2 3.31
PF01590GAF 3.31
PF06863DUF1254 2.48
PF06745ATPase 1.65
PF04828GFA 1.65
PF00571CBS 1.65
PF13531SBP_bac_11 0.83
PF02622DUF179 0.83
PF04545Sigma70_r4 0.83
PF04290DctQ 0.83
PF06808DctM 0.83
PF12544LAM_C 0.83
PF06480FtsH_ext 0.83
PF01565FAD_binding_4 0.83
PF03073TspO_MBR 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 6.61
COG2102Diphthamide synthase (EF-2-diphthine--ammonia ligase)Translation, ribosomal structure and biogenesis [J] 3.31
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 2.48
COG3791Uncharacterized conserved proteinFunction unknown [S] 1.65
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.83
COG1678Putative transcriptional regulator, AlgH/UPF0301 familyTranscription [K] 0.83
COG3476Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)Signal transduction mechanisms [T] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.12 %
All OrganismsrootAll Organisms33.88 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000044|ARSoilOldRDRAFT_c028767Not Available509Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10018219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1928Open in IMG/M
3300000816|AF_2010_repII_A10DRAFT_1001659All Organisms → cellular organisms → Bacteria → Proteobacteria2182Open in IMG/M
3300004157|Ga0062590_101072265Not Available773Open in IMG/M
3300004633|Ga0066395_10047419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1886Open in IMG/M
3300005168|Ga0066809_10111080Not Available680Open in IMG/M
3300005328|Ga0070676_10526825Not Available843Open in IMG/M
3300005329|Ga0070683_102063619Not Available548Open in IMG/M
3300005330|Ga0070690_100030262All Organisms → cellular organisms → Bacteria → Proteobacteria3363Open in IMG/M
3300005332|Ga0066388_100401363All Organisms → cellular organisms → Bacteria2016Open in IMG/M
3300005332|Ga0066388_100578164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1749Open in IMG/M
3300005332|Ga0066388_102730544Not Available901Open in IMG/M
3300005332|Ga0066388_102864536All Organisms → cellular organisms → Bacteria → Proteobacteria881Open in IMG/M
3300005332|Ga0066388_106390038All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M
3300005334|Ga0068869_100826632Not Available798Open in IMG/M
3300005338|Ga0068868_100071583All Organisms → cellular organisms → Bacteria → Proteobacteria2765Open in IMG/M
3300005343|Ga0070687_100855745Not Available648Open in IMG/M
3300005344|Ga0070661_100605257Not Available886Open in IMG/M
3300005347|Ga0070668_100438764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1120Open in IMG/M
3300005355|Ga0070671_100255826Not Available1488Open in IMG/M
3300005434|Ga0070709_10009986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5249Open in IMG/M
3300005456|Ga0070678_101152857Not Available717Open in IMG/M
3300005459|Ga0068867_100272359Not Available1385Open in IMG/M
3300005535|Ga0070684_100184761Not Available1896Open in IMG/M
3300005544|Ga0070686_101794168Not Available522Open in IMG/M
3300005546|Ga0070696_101550848Not Available568Open in IMG/M
3300005547|Ga0070693_100882780Not Available669Open in IMG/M
3300005549|Ga0070704_100964262Not Available770Open in IMG/M
3300005577|Ga0068857_101546583Not Available647Open in IMG/M
3300005614|Ga0068856_101353976Not Available727Open in IMG/M
3300005713|Ga0066905_100015231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3872Open in IMG/M
3300005713|Ga0066905_100586611Not Available941Open in IMG/M
3300005718|Ga0068866_10015290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3407Open in IMG/M
3300005719|Ga0068861_101819671Not Available604Open in IMG/M
3300005764|Ga0066903_100914266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense1590Open in IMG/M
3300005764|Ga0066903_102407793All Organisms → cellular organisms → Bacteria → Proteobacteria1018Open in IMG/M
3300005764|Ga0066903_104387014All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300005764|Ga0066903_108721025Not Available515Open in IMG/M
3300005843|Ga0068860_100652052Not Available1061Open in IMG/M
3300005844|Ga0068862_101520608Not Available675Open in IMG/M
3300006852|Ga0075433_10781420Not Available835Open in IMG/M
3300006852|Ga0075433_11591211Not Available564Open in IMG/M
3300006854|Ga0075425_100616776All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1247Open in IMG/M
3300006871|Ga0075434_100660604Not Available1063Open in IMG/M
3300006903|Ga0075426_11438017Not Available524Open in IMG/M
3300006904|Ga0075424_100350980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71571Open in IMG/M
3300007076|Ga0075435_100057228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_73153Open in IMG/M
3300007076|Ga0075435_100437937Not Available1127Open in IMG/M
3300009101|Ga0105247_10147095All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300009156|Ga0111538_10394462Not Available1753Open in IMG/M
3300009553|Ga0105249_12132843Not Available633Open in IMG/M
3300009553|Ga0105249_12822212Not Available557Open in IMG/M
3300010043|Ga0126380_11391923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium616Open in IMG/M
3300010046|Ga0126384_11682599Not Available599Open in IMG/M
3300010359|Ga0126376_10801489Not Available919Open in IMG/M
3300010360|Ga0126372_10057203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2686Open in IMG/M
3300010360|Ga0126372_11009913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales844Open in IMG/M
3300010366|Ga0126379_13671463Not Available514Open in IMG/M
3300010371|Ga0134125_12146128Not Available607Open in IMG/M
3300010398|Ga0126383_13095536Not Available543Open in IMG/M
3300011107|Ga0151490_1387409Not Available553Open in IMG/M
3300012487|Ga0157321_1019925Not Available606Open in IMG/M
3300012493|Ga0157355_1028310Not Available564Open in IMG/M
3300012494|Ga0157341_1005100Not Available974Open in IMG/M
3300012948|Ga0126375_11344534Not Available603Open in IMG/M
3300012948|Ga0126375_11367259Not Available598Open in IMG/M
3300012955|Ga0164298_10266670Not Available1042Open in IMG/M
3300012987|Ga0164307_10171304Not Available1451Open in IMG/M
3300012989|Ga0164305_10449545Not Available1000Open in IMG/M
3300013296|Ga0157374_10126468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2471Open in IMG/M
3300013308|Ga0157375_12815080Not Available581Open in IMG/M
3300014969|Ga0157376_10056483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3279Open in IMG/M
3300015374|Ga0132255_101131573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1177Open in IMG/M
3300017792|Ga0163161_11813062Not Available543Open in IMG/M
3300017974|Ga0187777_11300802Not Available534Open in IMG/M
3300025899|Ga0207642_10195943Not Available1112Open in IMG/M
3300025900|Ga0207710_10074101All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300025914|Ga0207671_11506159Not Available519Open in IMG/M
3300025919|Ga0207657_10251488Not Available1409Open in IMG/M
3300025923|Ga0207681_11115020Not Available663Open in IMG/M
3300025925|Ga0207650_11451041Not Available584Open in IMG/M
3300025927|Ga0207687_10252672Not Available1402Open in IMG/M
3300025927|Ga0207687_10694105Not Available863Open in IMG/M
3300025928|Ga0207700_10006701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6989Open in IMG/M
3300025936|Ga0207670_10023221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3857Open in IMG/M
3300025937|Ga0207669_10487214Not Available984Open in IMG/M
3300025942|Ga0207689_10700922Not Available854Open in IMG/M
3300025972|Ga0207668_11284038Not Available659Open in IMG/M
3300026023|Ga0207677_10864985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium chubuense813Open in IMG/M
3300026035|Ga0207703_11791165Not Available590Open in IMG/M
3300026067|Ga0207678_10321523Not Available1331Open in IMG/M
3300026089|Ga0207648_10217906Not Available1696Open in IMG/M
3300026089|Ga0207648_12157077Not Available518Open in IMG/M
3300026116|Ga0207674_10686865Not Available988Open in IMG/M
3300026118|Ga0207675_100236172All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300026121|Ga0207683_10006164All Organisms → cellular organisms → Bacteria → Proteobacteria10277Open in IMG/M
3300027560|Ga0207981_1064163Not Available673Open in IMG/M
3300028072|Ga0247675_1038889Not Available700Open in IMG/M
3300028380|Ga0268265_10570985All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae1077Open in IMG/M
3300028380|Ga0268265_11447315Not Available690Open in IMG/M
3300028381|Ga0268264_10250482Not Available1645Open in IMG/M
3300031198|Ga0307500_10065093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria913Open in IMG/M
3300031546|Ga0318538_10066442All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300031547|Ga0310887_10123460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1320Open in IMG/M
3300031771|Ga0318546_11102950Not Available558Open in IMG/M
3300031797|Ga0318550_10264308All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300031854|Ga0310904_10509695Not Available808Open in IMG/M
3300031892|Ga0310893_10011218All Organisms → cellular organisms → Bacteria → Proteobacteria2447Open in IMG/M
3300031912|Ga0306921_10002606All Organisms → cellular organisms → Bacteria → Proteobacteria18100Open in IMG/M
3300031943|Ga0310885_10420639Not Available715Open in IMG/M
3300032003|Ga0310897_10438011Not Available625Open in IMG/M
3300032012|Ga0310902_10016477All Organisms → cellular organisms → Bacteria → Proteobacteria3150Open in IMG/M
3300032017|Ga0310899_10566239Not Available565Open in IMG/M
3300032066|Ga0318514_10617876Not Available577Open in IMG/M
3300032122|Ga0310895_10146806Not Available1014Open in IMG/M
3300032180|Ga0307471_103023252Not Available597Open in IMG/M
3300032261|Ga0306920_101783833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria869Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.13%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.13%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.13%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.31%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.48%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.65%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000044Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil oldHost-AssociatedOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000816Forest soil microbial communities from Amazon forest - 2010 replicate II A10EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012487Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510Host-AssociatedOpen in IMG/M
3300012493Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610EnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300028072Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ARSoilOldRDRAFT_02876723300000044Arabidopsis RhizosphereRSFFRSQLDALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
AF_2010_repII_A1DRAFT_1001821933300000597Forest SoilMTDANGSAAELITWYFVARIALQFVFLSFVIFLLLNVMRLILLSLFPRLVREAPGPPLCTCGKWKYCLRDCPSNWPPRNYPSEAATLKRRLGLR*
AF_2010_repII_A10DRAFT_100165933300000816Forest SoilMTDPNGNTTELITWYFVGRIALQFLFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL*
Ga0062590_10107226513300004157SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0066395_1004741913300004633Tropical Forest SoilMTDANGSATELITWYFVGRIALQFVFLSLVIFLLFNVVFIILLSMFPRPVREAPEPPLCTCGKWKYCLRDYADCPGNWLPTRSGLPP*
Ga0066809_1011108013300005168SoilMTDASGNATELITWYFVARIALQFGFLSLVIYLLLNVVVIILYILGMFPTPVQEAPKPPLCTCGKWKYCLRNYADCPARDRAPHAPVE*
Ga0070676_1052682513300005328Miscanthus RhizosphereLFASSIALDQTAATDGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0070683_10206361913300005329Corn RhizosphereKMTDASGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0070690_10003026213300005330Switchgrass RhizosphereMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0066388_10040136333300005332Tropical Forest SoilMTDPNGNATELITWYFVGRIALQFVFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL*
Ga0066388_10057816443300005332Tropical Forest SoilMTDANGSAAELITWYFVGRIALQFVLLSFVIFLLLNVMRLILLSLFPRLVREAPGPPLCSCGKWKYCLRQYTDCPGIWPPP*
Ga0066388_10273054413300005332Tropical Forest SoilMTDANGNATELITWYFVGRIALQFVFLSLVIYLMLNVVRIILQSFGMFLPPVPEAPKPPLCTCGKWKYCLRQYTDCPGNWSRGAR*
Ga0066388_10286453613300005332Tropical Forest SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVFLILRFGLFPPLVRKESQFPLCTCGKWKYCLRDYADCPGNWPST*
Ga0066388_10639003823300005332Tropical Forest SoilMTDASGNATELITWYFVGRIALQFVSLSLAIYLLLVIVLYILGMFPAPVHQAPKPPLCTCGKWKYCLRNCVTGIRST*
Ga0068869_10082663213300005334Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0068868_10007158313300005338Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYC
Ga0070687_10085574523300005343Switchgrass RhizosphereTELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0070661_10060525713300005344Corn RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCNKWKYCLRQYTNCPGNWIITTEWPIATFPAR*
Ga0070668_10043876423300005347Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQESPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0070671_10025582613300005355Switchgrass RhizosphereGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0070688_10016121643300005365Switchgrass RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKW
Ga0070709_1000998643300005434Corn, Switchgrass And Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0070678_10115285713300005456Miscanthus RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0068867_10027235913300005459Miscanthus RhizosphereSFRTQWKMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0070684_10018476143300005535Corn RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWPRGGR*
Ga0070686_10179416813300005544Switchgrass RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWQRGGR*
Ga0070696_10155084813300005546Corn, Switchgrass And Miscanthus RhizosphereMTDANGSATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0070693_10088278013300005547Corn, Switchgrass And Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0070704_10096426213300005549Corn, Switchgrass And Miscanthus RhizosphereTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0068857_10154658323300005577Corn RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP*
Ga0068856_10135397613300005614Corn RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNL
Ga0066905_10001523143300005713Tropical Forest SoilMTDANGSAAELITWYFVGRIALQFVLLSFVIFLLLNVMRLILLSLFPRLVREAPGPPLCSCGKWKYCLRQYTDYPGIWPPP*
Ga0066905_10058661113300005713Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFVFMSLVIYLLLNVVRIILQRFGMFLPPLPEAPKPPLCTCGKWKYCLRQYTDCPGNWPSGARRQQTTARIPFEKQPRRRYWASDL*
Ga0068866_1001529033300005718Miscanthus RhizosphereMTDASGNATELISWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0068861_10181967123300005719Switchgrass RhizosphereFVFLFASSIALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWPRGGR*
Ga0066903_10091426623300005764Tropical Forest SoilMTDASGNATELITWYFVGRIALKFVFMSLVIYLLLNAVILILRCFGLFSPPVPKASQFPLCTCGKWKYCLRDYVDCPGNWLARDRWPLGG*
Ga0066903_10240779313300005764Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFVFMSLVIYLLLNVVRIILQSFGMFLPPLPEAPKPPLCTCGKWKYCLRQYTDCPGNWPSGARRQQTTARI
Ga0066903_10438701423300005764Tropical Forest SoilMTDPNGNATVSLRGFVGRIALQFVFVSLVIYLLLNVIRIILQSFGMFLPPVPEAPKPPFCTCGKWKYRLRQYTDCPDNWPRAN*
Ga0066903_10872102523300005764Tropical Forest SoilMTDPNGNATELITWYFVGRIALQFVFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDY
Ga0068860_10065205223300005843Switchgrass RhizosphereMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0068862_10152060813300005844Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNWP*
Ga0075433_1078142033300006852Populus RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVISLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0075433_1159121123300006852Populus RhizosphereSGNATDLITWHFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP*
Ga0075425_10061677623300006854Populus RhizosphereMTDASGNSTELITWYFLGRIALQFVSLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0075434_10066060413300006871Populus RhizosphereFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCHRNYADCPGNSPVRPSNLP*
Ga0075426_1143801723300006903Populus RhizosphereMLTDANGNATELITWYFVGRIALQFVFLSLVIYLLLNAVRIILQSFGVFLPQVPEAPKPPLCTCGKWKY
Ga0075424_10035098033300006904Populus RhizosphereMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP*
Ga0075435_10005722853300007076Populus RhizosphereMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP*
Ga0075435_10043793713300007076Populus RhizosphereSFRTQWKMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0105245_1017863533300009098Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKW
Ga0105247_1014709533300009101Switchgrass RhizosphereLFASSIALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWPRGGR*
Ga0111538_1039446233300009156Populus RhizosphereLFASSIALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0105249_1213284323300009553Switchgrass RhizosphereVRFLFASSIALDQTAATDGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0105249_1282221223300009553Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQESPKPPLCTCGKWKYCLRDCPGNSPVRP
Ga0126380_1139192313300010043Tropical Forest SoilKMTDASGNATDLITWYFVGRIALQFVSLSLAIYLLLVIVLYILGMFPAPMHQAPKPPLCTCGKWKYCLRNCVTGIRSA*
Ga0126384_1168259923300010046Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFVFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLR
Ga0126376_1080148913300010359Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFLFMSLVIYLLLNVVRIILQRFGMFLPPLPEAPKPPLCTCGKWKYCLRQYTDCPGNWPSGARRQQTTARITF*
Ga0126372_1005720323300010360Tropical Forest SoilMTDASGNATELITWYFVGRIALQFVSLSLAIYLLLVIVLYILGMFPAPMHQAPKPPLCTCGKWKYCLRNCVTGIRST*
Ga0126372_1100991323300010360Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFVFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL*
Ga0126379_1367146323300010366Tropical Forest SoilMTDANGSAAELITWYFVGRIALQFVLLSFVIFLLLNVMRLILLSLFPRLVREAPAPPLCTCGKWKYCLHQYTDCPGNWQSGARRN*
Ga0134125_1214612813300010371Terrestrial SoilTDGRQWRHDSVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0126383_1309553623300010398Tropical Forest SoilMTDANGSAAELITWYFVGRIALQFVLLSFVIFLLLNVMRLILLSLFPRLVREAPAPPLCTCGKWKYCL
Ga0151490_138740913300011107SoilKMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0157321_101992513300012487Arabidopsis RhizosphereELITWYFLGRIALQFVSLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP*
Ga0157355_102831013300012493Unplanted SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPMPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP*
Ga0157341_100510023300012494Arabidopsis RhizosphereVVALAVIVVVCGMIEFVLFLFASSIALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0126375_1134453423300012948Tropical Forest SoilMLTDPNGNATELVTWYFVGRIALQFVFMSLVIYLLLNVVPIILQSFGMFLPPLPEAPKPPLCTCGKWKYCLRQYTDCPGNWPSGARRQQTTARITF*
Ga0126375_1136725923300012948Tropical Forest SoilMTDANGSAAELITWYFVGRIALQFVLLSFVIFLLLNVMRLILLSLFPRLVREAPGPPLCSCG
Ga0164298_1026667013300012955SoilELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0164307_1017130413300012987SoilLFASSIALDQTAATDGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGN*
Ga0164305_1044954513300012989SoilTELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR*
Ga0157374_1012646823300013296Miscanthus RhizosphereMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRSSNLP*
Ga0157375_1018220533300013308Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWK
Ga0157375_1281508013300013308Miscanthus RhizosphereMTDASGNSTELITWYFLGRIALQFVSLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPV
Ga0157376_1005648333300014969Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCL
Ga0132255_10113157313300015374Arabidopsis RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNSP*
Ga0163161_1181306213300017792Switchgrass RhizosphereMTDASGNSTELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0187777_1130080213300017974Tropical PeatlandLFRARWKMTDASGNATDLITWYFVGRIALQFVSLSLAIYLLLVIVLYILGMFPAPVHQAPKPPLCTCGKWKYCLRNCVTGIRST
Ga0207642_1019594323300025899Miscanthus RhizosphereMTDASGNATELISWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207710_1007410133300025900Switchgrass RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWPRGGR
Ga0207647_1017771323300025904Corn RhizosphereMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNVARIILQTFGLFLPPAPEAPKAR
Ga0207671_1150615913300025914Corn RhizosphereLFASSIALDQTAATDGRQWRDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWPRGGR
Ga0207657_1025148833300025919Corn RhizosphereMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVVVVILYILGMFPTPVQESPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207681_1111502013300025923Switchgrass RhizosphereMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP
Ga0207650_1145104123300025925Switchgrass RhizosphereMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSN
Ga0207687_1025267233300025927Miscanthus RhizosphereSSIALDQTAATDGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0207687_1069410523300025927Miscanthus RhizosphereMTDASGNSTELITWYFLGRIALQFVSLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207700_1000670173300025928Corn, Switchgrass And Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLQVRPTNLP
Ga0207670_1002322133300025936Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLR
Ga0207669_1048721413300025937Miscanthus RhizosphereRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0207689_1070092213300025942Miscanthus RhizosphereMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP
Ga0207668_1128403813300025972Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQEAPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP
Ga0207677_1086498513300026023Miscanthus RhizosphereLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207703_1179116513300026035Switchgrass RhizosphereTAATDGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0207678_1032152333300026067Corn RhizosphereTELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0207648_1021790613300026089Miscanthus RhizosphereQWKMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207648_1215707713300026089Miscanthus RhizosphereGRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0207674_1068686523300026116Corn RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP
Ga0207675_10023617223300026118Switchgrass RhizosphereMTDASGNATELITWYFLGRIALQFVSLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207683_1000616443300026121Miscanthus RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVIVLYILGMFPTRVQEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0207981_106416313300027560SoilMTDASGNATELITWYFVARIALQFGFLSLVIYLLLNVVVIILYILGMFPTPVQEAPKPPLCTCGKWKYCLRNYADCPARDRAPHAPVE
Ga0247675_103888923300028072SoilTQWKMTDASGNATELITWYFLGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNLP
Ga0268265_1057098523300028380Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDCPGNLPVRPTNWP
Ga0268265_1144731513300028380Switchgrass RhizosphereRQWRHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0268264_1025048213300028381Switchgrass RhizosphereMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQESPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP
Ga0307500_1006509313300031198SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQEAPKPPLCTCGKWKYCLRD
Ga0318538_1006644213300031546SoilPRGWKMTDPNGNATELITWYFVGRIALQFLFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL
Ga0310887_1012346033300031547SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPTPVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP
Ga0318546_1110295013300031771SoilMTDPNGNATELITWYFVGRIALQFLFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKY
Ga0318550_1026430813300031797SoilSPLRVIRLKCRAHTPRGWKMTDPNGNATELITWYFVGRIALQFVFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL
Ga0310904_1050969513300031854SoilMTDASGNATELITWYFVGRIALQFVFLSLVIYLLLNVVVVILYILGMFPRPVQEAPKPPLCTCGKWKYCLRNYADCPGNSPVRPSNLP
Ga0310893_1001121833300031892SoilMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVVVVILYILGMFPTPVQESPKPPLCTCGKWKYCLRDCPGNSPVRPTNLP
Ga0306921_10002606193300031912SoilMTDPNGNATELITWYFVGRIALQFLFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL
Ga0310885_1042063923300031943SoilMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCL
Ga0310897_1043801113300032003SoilMTDASGNATDLITWHFVGRIALQFVFLSLVIYLLLNAVVIILYILGMFPTPVHEAPKPPLCTCGKWKYCLRDYAHCPGNWRVH
Ga0310902_1001647763300032012SoilMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPQAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0310899_1056623913300032017SoilDDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0318514_1061787613300032066SoilELITWYFVGRIALQFLFLSLIFYLLLNAVLIILHGFGMFWPPVREAPKPPLCTCGKWKYCLRDYADCPGNWKL
Ga0310895_1014680613300032122SoilHDAVRTQWKMTDPNGNATELITWYFVGRIALQFVFMSLVIYLLLNVARIILQTFGLFLPPAPEAPKPPLCTCGKWKYCLRQYTNCPGNWSRGGR
Ga0307471_10302325213300032180Hardwood Forest SoilMTDASGNATELITWYFVGRIALQFVFLSLIIYLLLNVVVIILHSLGMFPSAVREAPKPPLCTCGKWKYCLRDYAHCPGNWRVH
Ga0306920_10178383323300032261SoilMTDPNGNATELITWYFVGRIALQFVFVSLVIYLLLNVIRIVLQSFGMFLPPVPEAPKPPLCTCGKWKYCLRQYTDCPGNWPRAN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.