NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072033

Metagenome / Metatranscriptome Family F072033

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072033
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 90 residues
Representative Sequence MNHVVPVIALTGVIFVGTQAHAVDSTSQSTMNKRQMIVQMVGCMRKRMSANKSSSYNEAMKACKDQINKESDDLPSGALVASDTPAKP
Number of Associated Samples 80
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.50 %
% of genes near scaffold ends (potentially truncated) 23.97 %
% of genes from short scaffolds (< 2000 bps) 82.64 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.157 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(47.107 % of family members)
Environment Ontology (ENVO) Unclassified
(49.587 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(76.860 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 31.03%    β-sheet: 0.00%    Coil/Unstructured: 68.97%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF04972BON 7.44
PF04828GFA 4.13
PF01258zf-dskA_traR 3.31
PF06723MreB_Mbl 3.31
PF07238PilZ 2.48
PF04542Sigma70_r2 1.65
PF13545HTH_Crp_2 1.65
PF02518HATPase_c 1.65
PF12681Glyoxalase_2 0.83
PF14534DUF4440 0.83
PF00691OmpA 0.83
PF02594DUF167 0.83
PF03993DUF349 0.83
PF02979NHase_alpha 0.83
PF06271RDD 0.83
PF12812PDZ_1 0.83
PF11295DUF3096 0.83
PF07045DUF1330 0.83
PF01588tRNA_bind 0.83
PF02469Fasciclin 0.83
PF08281Sigma70_r4_2 0.83
PF13376OmdA 0.83
PF13091PLDc_2 0.83
PF02211NHase_beta 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG3791Uncharacterized conserved proteinFunction unknown [S] 4.13
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 3.31
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 3.31
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.65
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.65
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.65
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.65
COG0073tRNA-binding EMAP/Myf domainTranslation, ribosomal structure and biogenesis [J] 0.83
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.83
COG1872Uncharacterized conserved protein YggU, UPF0235/DUF167 familyFunction unknown [S] 0.83
COG2335Uncaracterized surface protein containing fasciclin (FAS1) repeatsGeneral function prediction only [R] 0.83
COG2517Predicted RNA-binding protein, contains C-terminal EMAP domainGeneral function prediction only [R] 0.83
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.16 %
All OrganismsrootAll Organisms38.84 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001471|JGI12712J15308_10180534All Organisms → cellular organisms → Bacteria → Proteobacteria551Open in IMG/M
3300001593|JGI12635J15846_10150560Not Available1596Open in IMG/M
3300001593|JGI12635J15846_10334778Not Available934Open in IMG/M
3300001593|JGI12635J15846_10424084All Organisms → cellular organisms → Bacteria → Proteobacteria798Open in IMG/M
3300002245|JGIcombinedJ26739_100124335All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2430Open in IMG/M
3300002245|JGIcombinedJ26739_100295925All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp.1503Open in IMG/M
3300004120|Ga0058901_1255356Not Available665Open in IMG/M
3300004631|Ga0058899_11406724Not Available670Open in IMG/M
3300005541|Ga0070733_10443222Not Available866Open in IMG/M
3300005541|Ga0070733_10524714Not Available793Open in IMG/M
3300005602|Ga0070762_10055758All Organisms → cellular organisms → Bacteria → Proteobacteria2190Open in IMG/M
3300005994|Ga0066789_10016181All Organisms → cellular organisms → Bacteria3300Open in IMG/M
3300006055|Ga0097691_1185764All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata539Open in IMG/M
3300006893|Ga0073928_10003199All Organisms → cellular organisms → Bacteria → Proteobacteria26306Open in IMG/M
3300006893|Ga0073928_10079218All Organisms → cellular organisms → Bacteria → Proteobacteria2818Open in IMG/M
3300006893|Ga0073928_10789989Not Available656Open in IMG/M
3300010876|Ga0126361_10410372Not Available502Open in IMG/M
3300010880|Ga0126350_10886210Not Available571Open in IMG/M
3300011120|Ga0150983_15144233Not Available719Open in IMG/M
3300011120|Ga0150983_16306471Not Available672Open in IMG/M
3300011271|Ga0137393_10657791All Organisms → cellular organisms → Bacteria → Proteobacteria898Open in IMG/M
3300012203|Ga0137399_10948366Not Available724Open in IMG/M
3300012363|Ga0137390_10329669All Organisms → cellular organisms → Bacteria → Proteobacteria1508Open in IMG/M
3300012685|Ga0137397_10132758All Organisms → cellular organisms → Bacteria → Proteobacteria1839Open in IMG/M
3300012925|Ga0137419_10374631All Organisms → cellular organisms → Bacteria → Proteobacteria1107Open in IMG/M
3300014501|Ga0182024_10033293All Organisms → cellular organisms → Bacteria → Proteobacteria8747Open in IMG/M
3300015197|Ga0167638_1069662Not Available726Open in IMG/M
3300019890|Ga0193728_1069528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1676Open in IMG/M
3300019890|Ga0193728_1142138Not Available1065Open in IMG/M
3300020579|Ga0210407_10017105All Organisms → cellular organisms → Bacteria → Proteobacteria5373Open in IMG/M
3300020579|Ga0210407_10135997All Organisms → cellular organisms → Bacteria → Proteobacteria1888Open in IMG/M
3300020580|Ga0210403_10164965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1814Open in IMG/M
3300020580|Ga0210403_10253183Not Available1445Open in IMG/M
3300020580|Ga0210403_10370326Not Available1171Open in IMG/M
3300020580|Ga0210403_10467631All Organisms → cellular organisms → Bacteria → Proteobacteria1026Open in IMG/M
3300020580|Ga0210403_11477886Not Available512Open in IMG/M
3300020582|Ga0210395_10666447All Organisms → cellular organisms → Bacteria → Proteobacteria779Open in IMG/M
3300020583|Ga0210401_10180183All Organisms → cellular organisms → Bacteria → Proteobacteria1969Open in IMG/M
3300020583|Ga0210401_10335773Not Available1373Open in IMG/M
3300021168|Ga0210406_10167147All Organisms → cellular organisms → Bacteria → Proteobacteria1840Open in IMG/M
3300021168|Ga0210406_10266713All Organisms → cellular organisms → Bacteria → Proteobacteria1401Open in IMG/M
3300021168|Ga0210406_10425501Not Available1060Open in IMG/M
3300021168|Ga0210406_10721651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium766Open in IMG/M
3300021168|Ga0210406_10732770Not Available758Open in IMG/M
3300021170|Ga0210400_10040543All Organisms → cellular organisms → Bacteria → Proteobacteria3614Open in IMG/M
3300021170|Ga0210400_10643826Not Available873Open in IMG/M
3300021170|Ga0210400_10777041Not Available786Open in IMG/M
3300021170|Ga0210400_11161696Not Available623Open in IMG/M
3300021171|Ga0210405_10118651All Organisms → cellular organisms → Bacteria → Proteobacteria2090Open in IMG/M
3300021180|Ga0210396_10962680Not Available725Open in IMG/M
3300021181|Ga0210388_10575794All Organisms → cellular organisms → Bacteria → Proteobacteria986Open in IMG/M
3300021404|Ga0210389_11370478Not Available540Open in IMG/M
3300021405|Ga0210387_10726089All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium880Open in IMG/M
3300021406|Ga0210386_10012043All Organisms → cellular organisms → Bacteria → Proteobacteria6779Open in IMG/M
3300021407|Ga0210383_11010043Not Available705Open in IMG/M
3300021407|Ga0210383_11576057Not Available541Open in IMG/M
3300021420|Ga0210394_10015352All Organisms → cellular organisms → Bacteria → Proteobacteria7301Open in IMG/M
3300021420|Ga0210394_10239254Not Available1588Open in IMG/M
3300021420|Ga0210394_10892132Not Available774Open in IMG/M
3300021432|Ga0210384_10925890Not Available772Open in IMG/M
3300021432|Ga0210384_11088867Not Available702Open in IMG/M
3300021475|Ga0210392_10114327All Organisms → cellular organisms → Bacteria → Proteobacteria1797Open in IMG/M
3300021475|Ga0210392_11043078Not Available612Open in IMG/M
3300021477|Ga0210398_11601815Not Available505Open in IMG/M
3300021478|Ga0210402_10636059Not Available988Open in IMG/M
3300021478|Ga0210402_10727930Not Available916Open in IMG/M
3300021478|Ga0210402_11267487Not Available664Open in IMG/M
3300021479|Ga0210410_10070875All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3055Open in IMG/M
3300021479|Ga0210410_10293843All Organisms → cellular organisms → Bacteria → Proteobacteria1458Open in IMG/M
3300021479|Ga0210410_10877524Not Available784Open in IMG/M
3300022508|Ga0222728_1031985Not Available818Open in IMG/M
3300022509|Ga0242649_1036628Not Available649Open in IMG/M
3300022518|Ga0224548_1041456Not Available509Open in IMG/M
3300022525|Ga0242656_1072108Not Available635Open in IMG/M
3300022528|Ga0242669_1051060Not Available708Open in IMG/M
3300022532|Ga0242655_10147485Not Available687Open in IMG/M
3300022532|Ga0242655_10204595All Organisms → cellular organisms → Bacteria → Proteobacteria605Open in IMG/M
3300022557|Ga0212123_10005490All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria22487Open in IMG/M
3300022713|Ga0242677_1029345Not Available727Open in IMG/M
3300022722|Ga0242657_1104130Not Available703Open in IMG/M
3300022724|Ga0242665_10155365Not Available726Open in IMG/M
3300023046|Ga0233356_1016375Not Available844Open in IMG/M
3300024288|Ga0179589_10602248Not Available515Open in IMG/M
3300025457|Ga0208850_1031713Not Available908Open in IMG/M
3300025504|Ga0208356_1009712Not Available2191Open in IMG/M
3300026291|Ga0209890_10004543Not Available5933Open in IMG/M
3300026515|Ga0257158_1083229Not Available620Open in IMG/M
3300026557|Ga0179587_10510828Not Available789Open in IMG/M
3300026557|Ga0179587_10685113Not Available675Open in IMG/M
3300027439|Ga0209332_1045431Not Available812Open in IMG/M
3300027565|Ga0209219_1122826Not Available633Open in IMG/M
3300027587|Ga0209220_1075202Not Available893Open in IMG/M
3300027629|Ga0209422_1133684Not Available563Open in IMG/M
3300027660|Ga0209736_1023042Not Available1896Open in IMG/M
3300027660|Ga0209736_1130098Not Available674Open in IMG/M
3300027667|Ga0209009_1153807Not Available585Open in IMG/M
3300027727|Ga0209328_10062401Not Available1142Open in IMG/M
3300027908|Ga0209006_10029140All Organisms → cellular organisms → Bacteria → Proteobacteria5003Open in IMG/M
3300027908|Ga0209006_10189199All Organisms → cellular organisms → Bacteria → Proteobacteria1792Open in IMG/M
3300027908|Ga0209006_10382539Not Available1188Open in IMG/M
3300027908|Ga0209006_11382604Not Available539Open in IMG/M
3300028047|Ga0209526_10075957All Organisms → cellular organisms → Bacteria2364Open in IMG/M
3300028047|Ga0209526_10167395All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300028047|Ga0209526_10423059All Organisms → cellular organisms → Bacteria → Proteobacteria880Open in IMG/M
3300028800|Ga0265338_10200549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.1505Open in IMG/M
3300028906|Ga0308309_10456082Not Available1102Open in IMG/M
3300029636|Ga0222749_10715448Not Available548Open in IMG/M
3300030743|Ga0265461_13937663Not Available505Open in IMG/M
3300030937|Ga0138302_1622189All Organisms → cellular organisms → Bacteria → Proteobacteria735Open in IMG/M
3300030991|Ga0073994_11813820Not Available730Open in IMG/M
3300031057|Ga0170834_104523825Not Available631Open in IMG/M
3300031128|Ga0170823_12347189Not Available554Open in IMG/M
3300031708|Ga0310686_110360698All Organisms → cellular organisms → Bacteria → Proteobacteria843Open in IMG/M
3300031715|Ga0307476_10048066All Organisms → cellular organisms → Bacteria2899Open in IMG/M
3300031715|Ga0307476_10608330All Organisms → cellular organisms → Bacteria → Proteobacteria810Open in IMG/M
3300031718|Ga0307474_10041320All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3400Open in IMG/M
3300031754|Ga0307475_10534115Not Available941Open in IMG/M
3300031754|Ga0307475_11301645Not Available563Open in IMG/M
3300031823|Ga0307478_11292827Not Available606Open in IMG/M
3300032174|Ga0307470_10001354All Organisms → cellular organisms → Bacteria → Proteobacteria9752Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil47.11%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil20.66%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.79%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.48%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.65%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.65%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.65%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.83%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.83%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015197Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022518Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023046Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MSEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030937Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12712J15308_1018053423300001471Forest SoilIAFTSVMFVGTQALAVDSSRQSTMSKRQMIVQIVDCMKKRMSADKSHSYNEAMKTCKDQINRESDDLSSGALVASDTSAKR*
JGI12635J15846_1015056053300001593Forest SoilMNRLVPRIALTAVIAVGTQAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNEAMKACKDQNKESDHSPSGALVASDIPAKP*
JGI12635J15846_1033477823300001593Forest SoilMDEILNALDLRRGIPMNRVATVIALTGVIFACAPALAGDSTGQSTMSKRQMIAQMVGCMRKRMSADRNSSYNDARKACQDQINKQSDSLASGALVASDTPAKP*
JGI12635J15846_1042408423300001593Forest SoilMSRVPMNRVVTVIASSGVIFVGTAALAADSIRQPTMSKRQMYAQIVDCMKKRMSANKNSSYNEAMKACKDQINKARGNGALVASDTPAKR*
JGIcombinedJ26739_10012433513300002245Forest SoilMNRLVTVIALSGVVFASTRALAGDTPSPSPMSKRQMLAQIVGCMKKRMSANRNSSYNEAMKACKEQIRKENGNSPGGTVVASDTAPKR*
JGIcombinedJ26739_10029592533300002245Forest SoilMPMNRVVTVIALTSVIFVGTQALAVESARPPTMSKHQLIAQMIGCMRKRMSADKNSSYHDSMKACKNQIDKQNDTLPSVPPAASDTLGKP*
Ga0058901_125535623300004120Forest SoilMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP*
Ga0058899_1140672413300004631Forest SoilRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP*
Ga0070733_1044322223300005541Surface SoilMNRVVPIIALTSVMFVGAQARAVDSTSQSTMSKRQMIVQIVDCMKKRMSADKSRSYNEAMKACKDQINKESDDLSSGALVASDTSAKR*
Ga0070733_1052471413300005541Surface SoilMHGIVNTLDLGRRILMKRVVMVIALTCAIFVGAQALAVDSTGQPTMSKRQMNAQMVGCMRKRMSANKNTSYNDAMKACKDQIYKQSDSLPSSALVASDIPAKL*
Ga0070762_1005575853300005602SoilMNRVVPIIALTGVLFAGAQAQAVDSTGQSAMSKRQMIAQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ*
Ga0066789_1001618123300005994SoilMNRLVPRIALTAVIAVGAQAHAVDSTSQSTTSKYQAIAQLVGCMRKRMSANTGRSYNEAMKACKDQMNKESDHLPSGALVASDIPAKP*
Ga0097691_118576413300006055Arctic Peat SoilMNREMAAIVLIGVIFVGTQAHAVDSTSQATISKRQMIVQMVGCMKKQMSANKSRSYNEAVKACKDQINMESEDLPSGALVASDTPAKR*
Ga0073928_10003199193300006893Iron-Sulfur Acid SpringMNRLLTVIAATGVIFTSAQALAVDSVRQSTMSKRQMIVQIVGCMKKRMAADKSSSYNEAMKACKHQINKESDNLESGALVASDSPAKP*
Ga0073928_1007921823300006893Iron-Sulfur Acid SpringMNRVVAVIALSGVICVGTRALAVDSIISQSTMSKRQMVALIIGCMKKRMSANKNSSYNEAMRACKDQIKKETDNLPSGALVASDTPAKQ*
Ga0073928_1078998923300006893Iron-Sulfur Acid SpringMKRIVTVIALTGAIFVGTQALAVDSTSPPTMSKRQMIVLMVGCMRKRMSTDKSSSYNTAMKACKDQINKESDNVPPGTLVASDTPAKP*
Ga0126361_1041037213300010876Boreal Forest SoilMNRLVPRIALTAVIAVGTQAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNEAMKACKDQNKESDHLPSGALVASDIPAKP*
Ga0126350_1088621013300010880Boreal Forest SoilMNRLVPIIALTGVIAGGTQARAVDSTSQSTTSKYQAIVQLVGCMRKRMSANKGRSYNEAMKACKDQNKESDHLPSGALVASDIPAKP*
Ga0150983_1514423313300011120Forest SoilLLAAAVDGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP*
Ga0150983_1630647113300011120Forest SoilMHHLLTVIASTGAMFVGAQALAADSINQPTMSKRQMIVQIVGCMKKRMAADRSSSYNAAMKACKGQMNKERDDLSSGALVASDTPAKR*
Ga0137393_1065779123300011271Vadose Zone SoilMNRIVTVIAVSGVILVGTKALAADAVNQSTMSKRQMFAQIVDCMKKRMSANKNSSYNEAMKACKDQISQASGNLPSGALVASDTPAKQ*
Ga0137399_1094836623300012203Vadose Zone SoilMNRVVTVIALSGVICLGPRAFAVDSISPSTMSKRQMHAQIVGCMKKRMSANKNSSYNEALKACKDQIKKEADTLPSGTLVASDTPAKR*
Ga0137390_1032966933300012363Vadose Zone SoilRVVTVIALSGVICLGTRAFAVDSISPSTMSKRQMLTQIVGCMKKRMSANKNSSYIEAMKACKDQIKKETDNLPSGALVASDAPAKRR*
Ga0137397_1013275833300012685Vadose Zone SoilMNRVVQAIILTGVVFVSPQAHADDSASQSTTSRAQIIAQLVDCMRKRISADKSRSYNEAMKACKGQANRASDDSPSGALVASDTQPKR*
Ga0137419_1037463113300012925Vadose Zone SoilMAVAALSGAILVGARAPAAEPENRSTLSKRQMYAQIVDCMKKRMSANKNGSYIEAMKACKDQVNQGNSSLPSGALVASDTPAKQ*
Ga0182024_10033293113300014501PermafrostMNHVVPVIALTGVIFVGTQAHAVDSTSQSTMNKRQMIVQMVGCMRKRMSANKSSSYNEAMKACKDQINKESDDLPSGALVASDTPAKP*
Ga0167638_106966213300015197Glacier Forefield SoilMHSILNTADSRRIPANRVVTVIMLTGAISLGAQAFAGDSTTQPTMSKRQTVVQIVDCMRKRMSANKSRSYNEAMKACKDQIKESDNPPAGTLVAADAA
Ga0193728_106952833300019890SoilMNRVVTVIVLSGVIFVGTRALAADPMSQSALNKRQMLAQIVGCMKKRMSANKNSSYNEAMKACKEQIKRDNDNLPSGTLVASDAAANR
Ga0193728_114213823300019890SoilMNRVVTVIALTGVTFVGAQAHAVDSTSQSRMSKRQLIVQMVGCMRKRMSADKGTSYNEAMKACKDQMNQENDNVPSGALVAS
Ga0210407_1001710543300020579SoilMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0210407_1013599753300020579SoilMNRVVPIIALTGVLFAGAQAQAVDSTGQSAMSKRQMIVQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0210403_1016496533300020580SoilMNRLVTVIALSGVVFASTRALAGDTPSQSPMSKRQMVAQVVGCMKKRMSANKNSSYNEAMKACKEQIRKENDNSPGGTLVVSDTAPKR
Ga0210403_1025318323300020580SoilMNRVVPIIALTGVIFVAAQAQAIDSTSQSTTSKRQMIVQMVDCMKKRMSADKSRSYNEAMKTCKDQMKESDDLSPGALVASDTSAKQ
Ga0210403_1037032613300020580SoilMKRVVMVVALAGVIFGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNDAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0210403_1046763123300020580SoilMNRVVTVIALTSVIFLGTQALAVDSARQPTMSKHQMIAQMLGCMRKRMSADKNSSYHDSMKACKTQINKQSDTLPSVPPAASDTLGKP
Ga0210403_1147788613300020580SoilATATHGVLNAQNFRRRILMKRVVTVIALTGVIFIGTQALAVDSTSPPTMSKRQMIAQVVGCMRKRMSANKNSSYNEAMKACKDQINKQSYNLPSGALVASDTPAKP
Ga0210395_1066644733300020582SoilMNRVVPIIALTGVIFVAAQAQAIDSTSQSTTSKRQMIVQMVDCMKKRMSADKSRSYNEAMKACKDHMNKESDDLSPGALVASDTSAKQ
Ga0210401_1018018343300020583SoilMNRVVPIIALTGVLFAGAQALAVDSTGQSAMSKRQMIVQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0210401_1033577313300020583SoilLIIAAIFVGTRARAVDSTSQSTMSKRQTIAQIVDCMRKRMSADKSRSYNEAMKACKDQIHKESDDLSPGVLVASESSPKR
Ga0210406_1016714713300021168SoilMHHLLTVIASTGAMFVGAQALAADSINQPTMSKRQMIVQIVGCMKKRMAADRSSSYNEAMKACKGQMNKERGDLSSGALVASDTPAKR
Ga0210406_1026671323300021168SoilMNHLLTVIAATGAMFAGAQALAADSINPPTMSKRQMIVQIVGCMKKRMAADRSSSYNAAMKACKGQMNKERGDLSSGALVASDTPAKR
Ga0210406_1042550123300021168SoilMKRVVTVIALTGVIFVGAQALAVDSTSPPTMSKRQMIAQVVGCMRKRMSANKNSSYNEAMKACKDQINKQSYNLPSGALVASDTPAKP
Ga0210406_1072165113300021168SoilTMRGILNSLHGVGEFRMNRVVTAIALSGVIFVGARALAADSVNRPTMSKRQVVAQIISCMKKRMSASKSSSYNEAMKACKDQIKRENADLPSDPLVASDGAGKQ
Ga0210406_1073277013300021168SoilMKRVVMVVALAGVIFVGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNDAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0210400_1004054333300021170SoilMNRIVTAISMTGVIFAGTQARAVDSAQPKTNKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQINKESDNLPSGALVASDTPPKP
Ga0210400_1064382623300021170SoilVNRIVTVIALSGLVFASTRALAADPPSQSPMSKRQVVARVVGCMKKRMAANKNSSYNEAMKVCKEQIRKENDNSPGGTLVASDSAPKR
Ga0210400_1077704123300021170SoilMHGILGALEICWGVTMNHLLTVIAATGAMFAGAQALAADSINQPTMSKRQMIVQIVGCMKKRMAADRSSSYNEAMKACKGQMNKERGDLSSGALVASDTPAKR
Ga0210400_1116169623300021170SoilMHGIVNTLDLSRRILMKRVVMVVALAGVIFGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNAAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0210405_1011865133300021171SoilMNRVVPIIALTGVLFAGAQAQAVDSTGQPAMSKRQMIVQMVDCMKKRMSADKSRSYNEAMKTCKDQINKESDDLPSGALVASDTSAKQ
Ga0210405_1087882423300021171SoilMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSP
Ga0210396_1096268013300021180SoilMNRIVTAISMTGVIFAGAQARAVDSASQPKTNKHRTIVQIVDCMKKRMSADRNSSYNAAMKACKEQINKESDNLPSGALVASDTPAKP
Ga0210388_1057579433300021181SoilMNRVVPIIALTGVIFVGAQAQAIDSTSQSTTSKRQMIVQMVDCMKKRMSADKSRSYNEAMKACKDHMNKESDDLSPGALVASDTSAKQ
Ga0210389_1137047813300021404SoilMNRIVTAISMTGVIFAGTQARAVDSAQPKTNKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQINKESDNLPSGALVASDTPQKP
Ga0210387_1072608913300021405SoilMNRVVTAISMTGVIFAGTQARAVDAASQPKTSKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQVNKERDDLASDALVASDTPAKP
Ga0210386_1001204333300021406SoilMNRIMMVIALSSAIVIGTRALAVDSTGQPAMSKRQLLAQVVECMKKRMSANKNTSYNEAMKACKEQINKESDNLSSGALVASDSQTKQ
Ga0210383_1101004323300021407SoilMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTRAKP
Ga0210383_1157605713300021407SoilMNRVVPIIALTGVIFVGAQAQAIDSTSQSTTSKRQMIVQMVDCMKKRMSADKSRSYNEAMKACKDHMNKESD
Ga0210394_1001535293300021420SoilMNRLLTAIAMTGVIFVAAPALAVDSASQPTMSKHHQMLVQMAGCMRKRMSADRNSSYNEAMKACKSKIDKGSDDLPSDVLVASDTPSKR
Ga0210394_1023925433300021420SoilMNRVVPIIALTGVLFAGAQAQAVDSTGQSAMSKRQMIAQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0210394_1089213223300021420SoilMNRLVPRIALTAVIAVGTQAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNEAMKACKDQINKESDHLPSGALVASDIPAKP
Ga0210384_1092589023300021432SoilMTRIVTAIALTGVICVGAQALAVDSTSQPTMSKRQMIVQIAGCMRKRMSDNKSSSYSDAMKACKDQMNKQSGTLPSGALVASDTPEKP
Ga0210384_1108886723300021432SoilMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDKINKERDNSPSGALVASDTQAKP
Ga0210392_1011432733300021475SoilMNRVVPIIALTGVLFAGAQAQAVDSMGQSAMSKRQMIVQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0210392_1104307813300021475SoilMTGVIFAGAQARAVDSASQPKTNKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQINKESDNLPSGALVASDTPPKP
Ga0210398_1160181513300021477SoilMNRVVPIIALTGVIFVAAQAQAIDSTSQSTTSKRQMIVQMVDCMKKRMSADKSRSYNEAMKACKDRMNKESDDLSPGALVASDTSAKQ
Ga0210402_1063605923300021478SoilMHGIVNTLDLSRRILMKRVVMVVALAGVIYVGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNDAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0210402_1072793023300021478SoilMNRIVTAISMTGVIFAGAQARAVDSASQPKTNKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQINKESDNLPSGALVASDTPAKP
Ga0210402_1126748713300021478SoilMTRVVTAIALTGVICVGAQALAVDSTSQPTMSKRQMIVQIAGCMRKRMSDNKSSSYSDAMKACKDQMNKQSGTLPSGALVASDTPEKP
Ga0210410_1007087553300021479SoilMNRLLTVIAATGVIFVGARAPAADSVNQSTMSKRQMIAHVVGCMKKRMAADKNSSYNGAMKACKDRINKQSDNLPPGALVASDAPAKP
Ga0210410_1029384323300021479SoilMNHLLTVIAATGAMFAGAQALAADSINQPTMSKRQMIVQIVGCMKKRMAADRSSSYNEAMKACKGQMNKERGDLSSGALVASDTPAKR
Ga0210410_1087752413300021479SoilGVIFVGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNAAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0222728_103198523300022508SoilRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTHAKP
Ga0242649_103662823300022509SoilNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0224548_104145613300022518SoilATINRLLNVIATTGVMFAGAQALAVDSINQPTISKRQMIVQVAGCMRKQMSSSKTVSYNQAMKACRDQINKRMDNSVSGALVASAAPAKP
Ga0242656_107210823300022525SoilGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0242669_105106023300022528SoilLAAAVDGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0242655_1014748523300022532SoilTLLAAAVDGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0242655_1020459513300022532SoilRIPMNRVVPIIALTGVLFAGAQALAVDSTGQSAMSKRQMIVQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0212123_1000549023300022557Iron-Sulfur Acid SpringMNRLLTVIAATGVIFTSAQALAVDSVRQSTMSKRQMIVQIVGCMKKRMAADKSSSYNEAMKACKHQINKESDNLESGALVASDSPAKP
Ga0242677_102934523300022713SoilEVVTLLAAAVDGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0242657_110413023300022722SoilDGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0242665_1015536513300022724SoilGILITLNVHGRIPMNRLLIGIATAGAIFVSSQALAVDSVNQSAMSKRQMIAQIVSCMKRRMSANKDSSYKEAMKACKDQINKERDNSPSGALVASDTQAKP
Ga0233356_101637513300023046SoilMNRVVTVIALSGVICVGTRALAGDSISQSTVGKRQMLAQIVGCMKKRMSADKNSTYNEAMRACKDQIKRETGNSPSSALVASDTPVKR
Ga0179589_1060224813300024288Vadose Zone SoilMNRVVTVIALSGVICLGPRAFAVDSISPSTMSKRQMHAQIVGCMKKRMSANKNSSYNEALKACKDQIKKEADTLP
Ga0208850_103171323300025457Arctic Peat SoilMNREMAAIVLIGVIFVGTQAHAVDSTSQATISKRQMIVQMVGCMKKQMSANKSRSYNEAVKACKDQINMESEDLPSGALVASDTPAKR
Ga0208356_100971253300025504Arctic Peat SoilMNRVVPMIALTGVMLVGAQAHAVDSASQSTMNKRQMIVQMVDCMKKRMSADKNRSYNEAMKACKDQINKESDDLSSGALVASDTSAKR
Ga0209890_1000454363300026291SoilMNRLVPRIALTAVIAVGAQAHAVDSTSQSTTSKYQAIAQLVGCMRKRMSANTGRSYNEAMKACKDQMNKESDHLPSGALVASDIPAKP
Ga0257158_108322913300026515SoilMNRLLTVIAATGVIFAGAQALAVDSVRQTTMSKRQMIVQIVGCMKKRMAANKSSSYHEAMKACKDQINKEGDNLASGALVASDTPAKP
Ga0179587_1051082813300026557Vadose Zone SoilMKRVATTISLTGVIFVGTQALAVDSTSQPTMSKRQMIVQMAGCMKKRMSANKNGSYNDAMKACKDQINKQSDKLPSGALVASDTTAKP
Ga0179587_1068511313300026557Vadose Zone SoilMNRVVQAILLTGVVFVSPQAHADDSASQSTTSRAQIIAQLVDCMRKRISADKSRSYNEAMKACKGQANRASDDSPSGALVASDTQPKR
Ga0209332_104543123300027439Forest SoilMSCLVPRIALTAVIAVGAQAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNEAMKACKDQINKQSDNLASGALVASDTPAKP
Ga0209219_112282613300027565Forest SoilMNRLVPRIALTAVIAVGTQAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNEAMKACKDQMNKESDHSPSGALVASDIPAKP
Ga0209220_107520213300027587Forest SoilMNRIMAVVAMSGAILVGARALAADPVNQSTMSKRQMYAQVIDCMKKRMSSNKNSSYNEAMKACKDQIKKGSGSLPSGALVASDTPAKR
Ga0209422_113368413300027629Forest SoilMFGGIPMSRVPMNRVVTVIASSGVIFVGTAALAADSIRQPTMSKRQMYAQIVDCMKKRMSANKNSSYNEAMKACKDQNKESDHLPSGALVASDIPAKP
Ga0209736_102304223300027660Forest SoilMNRLVPIIALTGVIAVGTRAHAVDSTSQSTTSKYQTIAQLVGCMRKRMSANKGRSYNGAMKACKDQINKESDHLPSGALVASDIPAKP
Ga0209736_113009823300027660Forest SoilMHGILGALEICWGVTMNRLLTVMSATGAMFVGAQALAADSINHPTMSKRQMIVQIVGCMKKRMAADRSSSYNEAMKACKGQMNKERGSLSSGALVASDTPAKP
Ga0209009_115380713300027667Forest SoilMYRVATAIALTGVLFACTPALAGDSTSQSTMSKRQMIAQMVGCMRKRMSADRNRSYNDARKACQDQMNKQSDSLASGALVASD
Ga0209328_1006240123300027727Forest SoilMNRVVAVIALSGVICVGTRALAVDSIISQSTMSKRQMVAQIIGCMKKRMSANKNSSYNEAMRACKDQIKKETDNLPSGALVASDTPAKQ
Ga0209006_1002914073300027908Forest SoilMNRVVPIIALTAVMFAGAQAHAVDSTSQSTTSKRQMIVQIVDCMKKRMSADKNRSYNETMKVCKDRINKESDDLSSGALVASDTPAKR
Ga0209006_1018919933300027908Forest SoilMIRVAPIIALTAVMFVGAQAHAVDSTSQSTIGKRQMIAQMLDCMKKRMSADKNRSYNEALKTCKDQINNESNNLSSGALVASDTSAKR
Ga0209006_1038253913300027908Forest SoilMNRVVPIIAFTSVMFVGTQALAVDSSRQSTMSKRQMIVQIVDCMKKRMSADKSHSYNEAMKTCKDQINRESDDLSSGALVASDTSAKR
Ga0209006_1138260413300027908Forest SoilMNRMVTAISMTGVIFAGTQARAVDSASQPKTNKHQTIVQIVGCMKKRMSADRSSSYNAAMKACKEQINKESDNLPSGALVASDTPPKP
Ga0209526_1007595733300028047Forest SoilMNRLVTVIALSGVVFASTRALAGDTPSPSPMSKRQMLAQIVGCMKKRMSANRNSSYNEAMKACKEQIRKENGNSPGGTVVASDTAPKR
Ga0209526_1016739513300028047Forest SoilMKRLVKVIALTGVIFAGTPALADDSTSPPTMSKRQMIVQMLGCMRKRMSANKNGSYNDAMKACKDQISKQSDNLPSGALVASDPPAK
Ga0209526_1042305923300028047Forest SoilMHCALNTQDIRHMPMNRVVTVIALTSVIFVGTQALAVESARPPTMSKHQLIAQMIGCMRKRMSADKNSSYHDSMKACKNQIDKQNDTLPSVPPAASDTLGKP
Ga0265338_1020054933300028800RhizosphereMIRLVQVRVLIGVMFIVAQAHAADSTSQSTMSKRQMIVQMIDCMKKRMSADKGRSYNEAMKACKDEMNRESGNLSSGALVASETQPKQ
Ga0308309_1045608223300028906SoilMNRVVPIIALTGVMFVGAQAHAVDSTGQSTMSKRQVIVQIVDCMKKRMSADKSHSYNEAMKACKDQINKES
Ga0222749_1071544813300029636SoilMHGIVNTLDLSRRILMKRVVMVVALAGVIFGAQALAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNTSYNDAMKACKDQINKQSDSFPSGALVASGTPAKP
Ga0265461_1393766313300030743SoilMNRVVPIIALTGVMFVGAQAHAVDSTGQSTISKRQMIVQIVDCMKKRMSADKSHSYNEAMKTCKDQINRESDALSSGALVASDTSAKR
Ga0138302_162218913300030937SoilPLGRNRMNRIMMVIALSGAIVIGTRALAADSTGQPAMSKRQLLAQVVECMKKRMSANKNSSYNEAKKACKEQINKESDNLSSGALVASDSQAKQ
Ga0073994_1181382013300030991SoilMNLVVTIALTSAIFFGAQALAVDSASQPAMSKHQMIAQMLGCMRKRMSADKNSSYHDSMKACKDQTKKQSDNLPSVPPAAGITPLGRG
Ga0170834_10452382513300031057Forest SoilMKRVVTAIALTGVIFVGAQARAADSASQPTMSKRQMIAQMVGCMRKRMSANKNSSYNDAMKACKDQINRQSDNFPSGALVASDTPAKP
Ga0170823_1234718913300031128Forest SoilMHGIVNTLDLRRRILMKRVVTAIALAGVIFVGAQARAADSASQPTMSKRQMIAQMVGCMRKRMSANKNSSYNDAMKACKDQINRQSDNFPSGALVASDTPAKP
Ga0310686_11036069813300031708SoilMNRVVPIIALTSVMFVGAQAHAVDSTSQSTTSKRQMIVQIVDCMKKRMSADKSHSYNEAMKACKDQLNKESDDLSSGALVASDTSAKR
Ga0307476_1004806643300031715Hardwood Forest SoilMNRVVPMIALTAVMFAGAQAHAVDSTSQSTTSKRQMIVQIADCMKRRMSADKSRSYNEAMKVCKDRINKESDDLSSGALVASDTPSKR
Ga0307476_1060833023300031715Hardwood Forest SoilMNRVVPIIALTGVLFAGAQAQSVDSTGQSAMSKRQMIVQVVDCMKKRMSADKSRSYNEAMKACKDRINKESDDLPSGALVASDTSAKQ
Ga0307474_1004132033300031718Hardwood Forest SoilMNRLLAVIAATGVIFVGARTLAADSVNQSTMSKRQMIVQIVGCMRKRMAADKSTSYNEAMKACKNRMNKESDNLPSGALVASDTPAKP
Ga0307475_1053411513300031754Hardwood Forest SoilMKRVVTAIALAGVIFVGTQAQAVDSTSQSTMRKRQMLAQMVGCMRKRMSADKNSSYNDAMKACKDQTNRQRDNFP
Ga0307475_1130164523300031754Hardwood Forest SoilMKRVVMAIALTGAIFVGAQAPAVDSTSQPTMSKRQMIAQMVGCMRKRMSANKNSSYNDAMKACKDQIYKQSDSLPSGALVASDTPAKP
Ga0307478_1129282723300031823Hardwood Forest SoilRRNSDTHRRVRSLVVVGMHGILETLGISWGVTMNRLLTVIAATGVIFVGARALAADSVNQSTMSKRQMIVQIVGCMRKRMAADKSTSYNEAMKACKNRMNKESDNLPSGALVASDTPAKP
Ga0307470_10001354113300032174Hardwood Forest SoilMYIGLGTLPMKRVVTVIAFTGVICVGAQALAVDLTNPPAMNKRQMFVQVIGCMKKRMSANKSSSYDDAMKVCKDQISKQSDSSSSGALVASAAPAKP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.