Metagenome / Metatranscriptome Family F071970

Basic Information
Family ID	F071970
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	80 residues
Representative Sequence	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Number of Associated Samples	42
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	44.54 %
% of genes near scaffold ends (potentially truncated)	28.10 %
% of genes from short scaffolds (< 2000 bps)	84.30 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (86.777 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (71.901 % of family members)
Environment Ontology (ENVO)	Unclassified (81.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (71.901 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 12199924783 2BS_KBA_SWE12_21mDRAFT_100024875 3B570J14230_100605282 4B570J14230_101372621 5B570J14230_101625441 6B570J14230_101768991 7B570J29645_1027751 8B570J29645_1058131 9JGI24768J34885_101051872 10Ga0074478_13680642 11Ga0074471_106431582 12Ga0073914_100377062 13Ga0102825_10792661 14Ga0102859_10869263 15Ga0102852_11052151 16Ga0105737_12035401 17Ga0114361_10124626 18Ga0114361_10697232 19Ga0102810_11537211 20Ga0129318_100884862 21Ga0164293_110652101 22Ga0211732_13845651 23Ga0208088_10134861 24Ga0207934_10728881 25Ga0208597_10410331 26Ga0214168_11273311 27Ga0210351_13230122 28Ga0210309_11126391 29Ga0210301_11373461 30Ga0210298_10039501 31Ga0210363_11293191 32Ga0210347_10774601 33Ga0208797_10510691 34Ga0208923_10805392 35Ga0315271_116732281 36Ga0334977_0509941_286_537 37Ga0334989_0004323_2_232 38Ga0334989_0011403_2997_3260 39Ga0334989_0012978_674_937 40Ga0334989_0016401_351_599 41Ga0334989_0017668_1336_1599 42Ga0334989_0018798_667_912 43Ga0334989_0022761_1354_1563 44Ga0334989_0041987_1205_1456 45Ga0334989_0087710_1_186 46Ga0334989_0097013_270_533 47Ga0334989_0139113_288_551 48Ga0334989_0139138_1088_1348 49Ga0334989_0144568_1087_1320 50Ga0334989_0152841_546_809 51Ga0334989_0165566_2_181 52Ga0334989_0170268_854_1120 53Ga0334989_0176331_728_982 54Ga0334989_0179712_424_675 55Ga0334989_0206917_540_785 56Ga0334989_0225765_622_885 57Ga0334989_0234446_769_996 58Ga0334989_0260847_420_671 59Ga0334989_0268543_239_502 60Ga0334989_0279827_307_570 61Ga0334989_0281761_2_208 62Ga0334989_0292336_457_708 63Ga0334989_0299338_113_376 64Ga0334989_0325330_1_240 65Ga0334989_0331532_476_727 66Ga0334989_0336838_65_328 67Ga0334989_0343171_466_729 68Ga0334989_0370786_235_486 69Ga0334989_0434266_421_666 70Ga0334989_0440844_376_654 71Ga0334989_0445736_466_654 72Ga0334989_0504204_266_535 73Ga0334989_0506450_217_423 74Ga0334989_0600151_167_418 75Ga0334989_0621523_259_513 76Ga0334989_0622914_153_383 77Ga0335003_0409673_3_212 78Ga0334998_0444256_321_584 79Ga0335005_0004323_7259_7513 80Ga0335005_0230521_3_218 81Ga0335005_0258591_776_1039 82Ga0335005_0560011_369_626 83Ga0335005_0624039_178_441 84Ga0335024_0230515_28_306 85Ga0335024_0247221_107_370 86Ga0335024_0327667_185_424 87Ga0335024_0499738_345_593 88Ga0334990_0091580_1251_1514 89Ga0335035_0614966_57_308 90Ga0335068_0163794_980_1192 91Ga0335017_0002973_3_212 92Ga0335017_0009058_22_285 93Ga0335017_0050539_2072_2335 94Ga0335017_0050633_1106_1369 95Ga0335017_0053822_1462_1725 96Ga0335017_0059310_1572_1823 97Ga0335017_0086322_1518_1781 98Ga0335017_0127297_1151_1414 99Ga0335017_0130254_1272_1472 100Ga0335017_0138996_1_225 101Ga0335017_0202750_35_298 102Ga0335017_0218197_1_276 103Ga0335017_0229734_840_1055 104Ga0335017_0234867_3_230 105Ga0335017_0249955_208_459 106Ga0335017_0260088_132_353 107Ga0335017_0265869_733_963 108Ga0335017_0368839_540_782 109Ga0335017_0379258_291_542 110Ga0335017_0551146_270_521 111Ga0335017_0558263_23_262 112Ga0335017_0632816_328_549 113Ga0335017_0645068_315_542 114Ga0335017_0648660_345_539 115Ga0335017_0694843_328_516 116Ga0335061_0053828_1766_1972 117Ga0335061_0071754_1518_1844 118Ga0335061_0103605_1205_1435 119Ga0335061_0210074_340_603 120Ga0335061_0591394_310_549 121Ga0335064_0376000_598_828
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 12199924783 2B570J14230_101372621 3B570J29645_1058131 4Ga0073914_100377062 5Ga0114361_10124626 6Ga0114361_10697232 7Ga0334989_0022761_1354_1563 8Ga0334989_0087710_1_186 9Ga0334989_0206917_540_785 10Ga0335061_0071754_1518_1844 11Ga0335061_0591394_310_549
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 12199924783 2B570J14230_101372621 3B570J29645_1058131 4Ga0073914_100377062 5Ga0114361_10124626 6Ga0114361_10697232 7Ga0334989_0022761_1354_1563 8Ga0334989_0087710_1_186 9Ga0334989_0206917_540_785 10Ga0335061_0071754_1518_1844 11Ga0335061_0591394_310_549
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.92% β-sheet: 11.49% Coil/Unstructured: 27.59%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00153	Mito_carr	1.65
PF00078	RVT_1	0.83
PF13359	DDE_Tnp_4	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	13.22 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	13.22 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	13.22 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	11.57 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	11.57 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	11.57 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	11.57 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Bacillariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae	1.65 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	9.92 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Bacillariophycidae	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae	1.65 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	9.92 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Bacillariales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales	0.83 %
Naviculales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales	0.83 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	9.92 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Amphipleuraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae	0.83 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	0.83 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	9.92 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Amphiprora	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora	0.83 %
Fragilariopsis	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis	0.83 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	9.92 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Amphiprora paludosa	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa	0.83 %
Fragilariopsis cylindrus	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus	0.83 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	4.96 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	3.31 %
Unclassified	root	N/A	86.78 %

Name	Rank	Taxonomy	Distribution
Amphiprora paludosa	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa	0.83 %
Fragilariopsis cylindrus CCMP1102	strain	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	0.83 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	4.96 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	3.31 %
Unclassified	root	N/A	86.78 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352003\|2199772387	Not Available	500	Open in IMG/M
3300000124\|BS_KBA_SWE12_21mDRAFT_c10002487	All Organisms → cellular organisms → Eukaryota	6606	Open in IMG/M
3300001282\|B570J14230_10060528	Not Available	1225	Open in IMG/M
3300001282\|B570J14230_10137262	Not Available	707	Open in IMG/M
3300001282\|B570J14230_10162544	Not Available	632	Open in IMG/M
3300001282\|B570J14230_10176899	Not Available	597	Open in IMG/M
3300002390\|B570J29645_102775	Not Available	1076	Open in IMG/M
3300002390\|B570J29645_105813	Not Available	711	Open in IMG/M
3300002447\|JGI24768J34885_10105187	Not Available	948	Open in IMG/M
3300005827\|Ga0074478_1368064	Not Available	651	Open in IMG/M

Showing 1 to 10 of 119 entries

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.17%
Terrestrial	Environmental → Terrestrial	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.12%
Marine	Environmental → Aquatic → Marine	12.40%
Sediment	Environmental → Aquatic → Sediment	1.65%
Soil	Environmental → Terrestrial → Soil	0.83%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.92%
Lake	Environmental → Aquatic → Freshwater → Lake	75.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.92%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.61%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	9.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	74.38%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	9.92%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	71.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.61%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.83%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.65%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	0.83%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.65%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352003	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002390	Freshwater microbial communities from Lake Mendota, WI - 02APR2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300006040	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199924783	2199352003	Freshwater	MWYGGIEILDVLRHQIEWLRLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIHRIFM
BS_KBA_SWE12_21mDRAFT_100024875	3300000124	Marine	MWYGGIEILDVLRHQIEWLCLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIHRIFM*
B570J14230_100605282	3300001282	Freshwater	MWYGGIEILDVLRHQIEWLRLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIHRIFM*
B570J14230_101372621	3300001282	Freshwater	VPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
B570J14230_101625441	3300001282	Freshwater	VFHVXVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM*
B570J14230_101768991	3300001282	Freshwater	HRVFLHANVVYVACGIEILDVLDIKIRVATLDESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
B570J29645_1027751	3300002390	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
B570J29645_1058131	3300002390	Freshwater	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQXTCHARASXILITKXXKILYLGFRRIYT*
JGI24768J34885_101051872	3300002447	Freshwater And Sediment	MLKRVMISECVSCVPRVFLHASVEYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0074478_13680642	3300005827	Sediment (Intertidal)	MLKRVMRSGCVSCVPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0074471_106431582	3300005831	Sediment (Intertidal)	VFRMLPYATVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0073914_100377062	3300006040	Sand	MISECVSCVPRVFLHASVVYVARGIEILDVLDIRFVWLCLYESLLTYVAHMDLVGDPLQDTCHARASEILITKVRKIST*
Ga0102825_10792661	3300007655	Estuarine	VPRVFLHVSVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0102859_10869263	3300007708	Estuarine	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM*
Ga0102852_11052151	3300007718	Estuarine	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0105737_12035401	3300007862	Estuary Water	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARSSEILITKIHKIFYLGFRRIFM*
Ga0114361_10124626	3300008265	Freshwater, Plankton	MCVLRVLHMFLHATTACGTELLMYLASSIVWLCLYKSLLTYVAHMDLVGDPLQGTCHARASEILITKMRKILYLGFRRIYT*
Ga0114361_10697232	3300008265	Freshwater, Plankton	MLKRMMISECVSCVPRVFLHASVVYVACGIEILDVLDIKICVATLVRESTYLHSSHGSRRRSASSLITKIHKIFYLEICRIFM*
Ga0102810_11537211	3300009002	Estuarine	VFHVCVACFLHAGVECVACGIEILDVLDIRFGWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKI
Ga0129318_100884862	3300011009	Freshwater To Marine Saline Gradient	VFHVCVACFLHAGVECVACGIEILDVLDIRFGWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM*
Ga0164293_110652101	3300013004	Freshwater	MISECVSCVPRVFLHASVVYVARGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM*
Ga0211732_13845651	3300020141	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDTKIRVATLVRESLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0208088_10134861	3300020505	Freshwater	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0207934_10728881	3300020561	Freshwater	MWYGGIEILDVLRHQIEWLCLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIHRIFM
Ga0208597_10410331	3300020562	Freshwater	VPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0214168_11273311	3300021140	Freshwater	MISESVSCVPRVFLHASVVCVACDIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0210351_13230122	3300021316	Estuarine	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0210309_11126391	3300021317	Estuarine	VFRMLPYATVACGIKILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0210301_11373461	3300021325	Estuarine	VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKMRKILYLGFRRIWILAPSLI
Ga0210298_10039501	3300021328	Estuarine	VRISESVSCVPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0210363_11293191	3300021330	Estuarine	VFRMLPYATVACGIEILDVLDIRFGWLRLYESLLTYVAHLDLVGDPLEDTCHARASEILITKIHKIFYLGIRRIFM
Ga0210347_10774601	3300021331	Estuarine	MISECVSCVPRVFLHASVVYVAHGIEILDVLNIKFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0208797_10510691	3300027186	Estuarine	VRISECVSCVPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIF
Ga0208923_10805392	3300027320	Estuarine	VPRVFLHVSVVCVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0315271_116732281	3300032256	Sediment	VPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0334977_0509941_286_537	3300033978	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASELLITKIHKIFYLGFRRIFM
Ga0334989_0004323_2_232	3300033984	Freshwater	MISECVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKI
Ga0334989_0011403_2997_3260	3300033984	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRSVWLRLYESLLTYVAHMDLVGDPLQDTCYARASEILITKIHKIFYLGIRRIFM
Ga0334989_0012978_674_937	3300033984	Freshwater	MISECVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWQRLYESLLTYVAHMDLVGDPLQDTCHACASEILITKIHKIFYLGICRIFM
Ga0334989_0016401_351_599	3300033984	Freshwater	MCACSRVSTCECSVCSVCGIEILDILDIKFVWLRLYESLLTYVAHMDLVGDPLQDTRHARASEILITKIHEIFYLGIRRIFM
Ga0334989_0017668_1336_1599	3300033984	Freshwater	MISECVSCVPRVFLHASVVCVARGIEILDVLDIRFVWLRLCESLLTYVAHMDLVGDPLQDTCHARAFEILITKIHKIFYLGIRRIFM
Ga0334989_0018798_667_912	3300033984	Freshwater	MCVSCVLRMFLHATVACGTELLDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQGTCHARASEILITKMRTILYLGFRRIFT
Ga0334989_0022761_1354_1563	3300033984	Freshwater	MFQACGTEILDVLDIKIRVAMLVRESTYLRSSHGSRRDPLQGTCHARAPEILITKIHKIFYLGICRIFM
Ga0334989_0041987_1205_1456	3300033984	Freshwater	MFHVCVACFLHASVECVACGIEILDVLDIRFEWLRSYESLLTYVAHMNLVGDTLQDTCHARASEILITKIHKIFYLGFCRIFM
Ga0334989_0087710_1_186	3300033984	Freshwater	ILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASELLITKTHKIFYLGICRIF
Ga0334989_0097013_270_533	3300033984	Freshwater	MISECVSCVPRVFLHAGVVYVVCGIEILDVLDIRFVWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFT
Ga0334989_0139113_288_551	3300033984	Freshwater	MISECVSCVPRVFLHASVVCVACGIEILDVLDIRFVWLHLYESLLTYVAHLDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0334989_0139138_1088_1348	3300033984	Freshwater	MISECVSCVPCVFLHANVVYVACGIEILNVLDIRFVWLRLYESLLIYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0334989_0144568_1087_1320	3300033984	Freshwater	ACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDFVGDPLQDTCHARASEILITKIHKIFYLGFRRIFV
Ga0334989_0152841_546_809	3300033984	Freshwater	MKSECVSCVPRVFLHASVDCVACGIEILDVLNIRFEWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0334989_0165566_2_181	3300033984	Freshwater	DVLRHQIEWLRLYESLLTYVAHKDLVGDPLQDAHHARAFEILITKIHKIFYVGIHRIFM
Ga0334989_0170268_854_1120	3300033984	Freshwater	MRISECVSCVPRVFIHASVVCVACGIEILDVLDIRFEWLRLYESLLTCVAHMDLVGDPIQDTCHARASEILITKIHKIFYLRIRRIFM
Ga0334989_0176331_728_982	3300033984	Freshwater	MICVSCVPRVFLHASVVYVACGIEILDVLDIKIRVATLVRESTYLRSSHGSRRRSASRCLPRVSEILITKIHKIFYLGIRRIFM
Ga0334989_0179712_424_675	3300033984	Freshwater	MFHVCVACFLHASVECVACGIEILDVLDIRFEWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFCRIFM
Ga0334989_0206917_540_785	3300033984	Freshwater	MCVSCVLCMFLHVTVSCGTELLGDVGIKYCVAMLVRESITYVAHIDLVGDPLQGTCHTRASEILITKMRKILYLGFCRIFT
Ga0334989_0225765_622_885	3300033984	Freshwater	MISECVSCVPRVFLHASVVCVARGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKIFYLGIRRIFV
Ga0334989_0234446_769_996	3300033984	Freshwater	FLHASVVYVAHGIEILDVLDIRFVWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHQIFYLGIRRIFM
Ga0334989_0260847_420_671	3300033984	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDVRFGWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0334989_0268543_239_502	3300033984	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIKYVWLRLYESLFTYVAHVDLVRDPLQDTCHARASEMLITKIHKIFYLGIRRIFM
Ga0334989_0279827_307_570	3300033984	Freshwater	MNSECVSCVHRVFLHANVVCVACGIEILDVLDIRFVWLRLYESLLTYVAHVDLVGDPIQDTCHARASEILITKIHKIFHLGIRRIFV
Ga0334989_0281761_2_208	3300033984	Freshwater	YVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPFQETCHARASEILITKVHKIFYLGIRRIFM
Ga0334989_0292336_457_708	3300033984	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0334989_0299338_113_376	3300033984	Freshwater	MISACVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWLCLYESLLTYVAHMDLVGDPFQDTCHARASEILITKVHKIFYLGIRSIFM
Ga0334989_0325330_1_240	3300033984	Freshwater	MISECVSCVPRVFLHASVVCVARGIEILDVLDIKFVWLLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFY
Ga0334989_0331532_476_727	3300033984	Freshwater	MFHVCVACFLHAGVGCVACGIEILDVLDIRFGWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRMIFM
Ga0334989_0336838_65_328	3300033984	Freshwater	MISECVLCVPRVFLHASVVYVACGIEILDVLDIKYVWLRLYESLFTYVAHVDLVGDPLQDTCHARASEILITKIHKIFYLGICRIFM
Ga0334989_0343171_466_729	3300033984	Freshwater	MISECVLCVPRVFLHASVVYVACGIKILDVLDIKYVWLRLYESLFTYVAHVDLVGDPLQDTCHARASEILITKIHKIFYLGICRIFM
Ga0334989_0370786_235_486	3300033984	Freshwater	MFHVCVACFLHTGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTRHARASEILITKIHKIFYLGFRRIFM
Ga0334989_0434266_421_666	3300033984	Freshwater	MLKRVMRSECVSCVPRVFLHASVVYVAHGIKILDVQIIRFVWLCLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKI
Ga0334989_0440844_376_654	3300033984	Freshwater	MLKKVMISECLSCVPRVFLHASVVYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLEGDPLQDTCHARVSEILITKIHKIFYLGIRRIFM
Ga0334989_0445736_466_654	3300033984	Freshwater	EILDVLDIRFEWLCLYESLLTYVAHLDLVGDPLQDTCHARASKILITKIHKIFYVGIRRIFM
Ga0334989_0504204_266_535	3300033984	Freshwater	MISACVSCVPRVFLHASVVYVACGIEILDVLDIKSRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARVSKILITKIHKIFYLGIRRIFM
Ga0334989_0506450_217_423	3300033984	Freshwater	MWYGGIEILDVLRHQIEWLCLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIRRIFM
Ga0334989_0600151_167_418	3300033984	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFCRIFM
Ga0334989_0621523_259_513	3300033984	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRFVWLRLYESQLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRI
Ga0334989_0622914_153_383	3300033984	Freshwater	MFRMFLYATVACGIEIPDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDACHARASEILITKIHKIFYLGIRRIFM
Ga0335003_0409673_3_212	3300033995	Freshwater	VYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0334998_0444256_321_584	3300034019	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0335005_0004323_7259_7513	3300034022	Freshwater	MCFMCASRVSTCECSVCSVCGIEILDVLDIKFVWLRLYESLLTYVAHMDLVGDPLQDTRHARASEILITKIHEIFYLGIRRIFM
Ga0335005_0230521_3_218	3300034022	Freshwater	SVVYVACGIEILDVLDIRSVWLRLYESLLTYVAHMDLVGDPLQDTCYARASEILITKIHKIFYLGIRRIFM
Ga0335005_0258591_776_1039	3300034022	Freshwater	MISECVSCVPRVFLHASVLYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLRDTCHARASEILITKVHKIFYLGIRRIFM
Ga0335005_0560011_369_626	3300034022	Freshwater	MISECLSCVPRVFLHASVVYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLEGDPLQDTCHARVSEILITKIHKIFYLGIRRIF
Ga0335005_0624039_178_441	3300034022	Freshwater	MISECVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHEIFYLGIRRIFM
Ga0335024_0230515_28_306	3300034051	Freshwater	MLKKVMISECVSCVPRVFLHASVVYVACGIEILDVLDIKYVWLRLYESLFTYVAHVDLVGDPLQDTCHARASEILITKIHKIFYLGICRIFM
Ga0335024_0247221_107_370	3300034051	Freshwater	MISECVSCVPRVFLHASVEYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0335024_0327667_185_424	3300034051	Freshwater	MPRVFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0335024_0499738_345_593	3300034051	Freshwater	FHVCVACFLHAGVECVACGIKILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0334990_0091580_1251_1514	3300034068	Freshwater	MISECVSCVPRVFLHASVLYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKVHKIFYLGIRRIFM
Ga0335035_0614966_57_308	3300034105	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFGWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFCRIFM
Ga0335068_0163794_980_1192	3300034116	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIH
Ga0335017_0002973_3_212	3300034167	Freshwater	VYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPFQETCHARASEILITKVHKIFYLGIRRIFM
Ga0335017_0009058_22_285	3300034167	Freshwater	MISECVSCVPRMFLHASVVYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPFQDTCHARASEILITKVHKIFYLGIRRIFM
Ga0335017_0050539_2072_2335	3300034167	Freshwater	MISECVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKVHKIFYLGIRRIFM
Ga0335017_0050633_1106_1369	3300034167	Freshwater	MISECVSCVPRVFLHAGVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGICRIFM
Ga0335017_0053822_1462_1725	3300034167	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIRFVWLHLYESLLTYVAHMDHVGDPLQDTCHARASEILITKIRKIFYLGICRILM
Ga0335017_0059310_1572_1823	3300034167	Freshwater	MFHVCVACFLHASVECVACGIEILDVLDIRFEWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFM
Ga0335017_0086322_1518_1781	3300034167	Freshwater	MISECVSCVPRVFLHASVVCVACGIEILDILDIRFVWLRLYESLLTYVAHMDLVGDPFQDTCYARASEILITKIHKIFYLGIRRIFM
Ga0335017_0127297_1151_1414	3300034167	Freshwater	MISECVSCVPRVFLHANVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHTRASEILITKIHKIFYLGIHRIFM
Ga0335017_0130254_1272_1472	3300034167	Freshwater	QCGIEILDVLDIRFEWLRSYESLLTYVAHMDLVGDPLQDTCHTRASEILITKIHKIFYVGIHRIFM
Ga0335017_0138996_1_225	3300034167	Freshwater	MISECVSCVPRVFLHAGVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIH
Ga0335017_0202750_35_298	3300034167	Freshwater	MISECVSCVPRVFLHASVVYVAHGIEILDVLDIRFVWLRSYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHQIFYLGIRRIFM
Ga0335017_0218197_1_276	3300034167	Freshwater	MLKKVMISECLSCVPRVFLHASVVYVACGIEILDVLDIRFVWLRLYESLLTYVAHIDLEGDPLQDTCHARVSEILITKIHKIFYLGIRRIFM
Ga0335017_0229734_840_1055	3300034167	Freshwater	SVLYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKVHKIFYLGIRRIFM
Ga0335017_0234867_3_230	3300034167	Freshwater	MLKKVMISECLSCVPRVFLHASVVYVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLEGDPLQDTCHARVSEILI
Ga0335017_0249955_208_459	3300034167	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHEIFYLGFRRTFM
Ga0335017_0260088_132_353	3300034167	Freshwater	MFLYATVACGIEIPDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDACHARASEILITKIHKIFYLGIRRIFM
Ga0335017_0265869_733_963	3300034167	Freshwater	VFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0335017_0368839_540_782	3300034167	Freshwater	MISECVSCVPRVFLHASVVCVARGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKIFYLG
Ga0335017_0379258_291_542	3300034167	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTRHARASEILITKIHKIFYLGFRRIFM
Ga0335017_0551146_270_521	3300034167	Freshwater	MFHVCVACFLHAGVERVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQNTCHARASEILITKIHKIFYLGFRRIFM
Ga0335017_0558263_23_262	3300034167	Freshwater	MPRLFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKIFYLGIRRIFM
Ga0335017_0632816_328_549	3300034167	Freshwater	MFHVCVACFLHAGVECVACGIEILDVLDVRFEWLRLYESLLAYVAHMDLVGDPLQETCHARASEILITKIHKIF
Ga0335017_0645068_315_542	3300034167	Freshwater	MISECVSCVPRVFLHASVVYVARGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHK
Ga0335017_0648660_345_539	3300034167	Freshwater	GIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0335017_0694843_328_516	3300034167	Freshwater	EILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASKILITKIHKIFYLGFRRIFM
Ga0335061_0053828_1766_1972	3300034168	Freshwater	MWYGGIEILDVLRHRIEWLRLYESLLTYVAHKDLVGDPLQDTHHARAFEILITKIHKIFYVGIHRIFM
Ga0335061_0071754_1518_1844	3300034168	Freshwater	MLKKVMISECVSCVPHVFLHASVVYVAHGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKVHKIFYLGIRRIFMQYVVSTYLDLRAITDLS
Ga0335061_0103605_1205_1435	3300034168	Freshwater	MFSMLPYATVACGTEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGFRRIFV
Ga0335061_0210074_340_603	3300034168	Freshwater	MISECVSCVPRVFLHASVVYVACGIEILDVLDIKYVWLRLYESLFTYVAHVDLVGDPLQDTCHARASEILITKIHKIFYLGICRIFM
Ga0335061_0591394_310_549	3300034168	Freshwater	MKSECVSCVPRVFLHVSVVYVARGIEILDVLDIRFVWLRLYESLLTYVAHMDLVGDPLQDACHAQIHNIFYLGIRRIFM
Ga0335064_0376000_598_828	3300034357	Freshwater	MFLHASVVCVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071970

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences