Metagenome / Metatranscriptome Family F071866

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	120 residues
Representative Sequence	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDTNDSDAEPDEASDCEMFGT
Number of Associated Samples	77
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.21 %
% of genes near scaffold ends (potentially truncated)	38.02 %
% of genes from short scaffolds (< 2000 bps)	70.25 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (29.752 % of family members)
Environment Ontology (ENVO)	Unclassified (72.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.802 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03975	CheD	21.49
PF00072	Response_reg	5.79
PF01339	CheB_methylest	4.96
PF00474	SSF	4.96
PF00929	RNase_T	3.31
PF12860	PAS_7	2.48
PF13545	HTH_Crp_2	1.65
PF10335	DUF294_C	1.65
PF00702	Hydrolase	0.83
PF00015	MCPsignal	0.83
PF11755	DUF3311	0.83
PF00575	S1	0.83
PF14026	DUF4242	0.83
PF03946	Ribosomal_L11_N	0.83
PF02518	HATPase_c	0.83
PF00672	HAMP	0.83
PF02743	dCache_1	0.83
PF08439	Peptidase_M3_N	0.83
PF00486	Trans_reg_C	0.83
PF04542	Sigma70_r2	0.83
PF03705	CheR_N	0.83
PF00274	Glycolytic	0.83
PF08281	Sigma70_r4_2	0.83
PF11752	DUF3309	0.83
PF07452	CHRD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1871	Chemotaxis receptor (MCP) glutamine deamidase CheD	Signal transduction mechanisms [T]	42.98
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	9.92
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.65
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.65
COG0080	Ribosomal protein L11	Translation, ribosomal structure and biogenesis [J]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.83
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.35 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.26 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	81.82 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	62.81 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.48 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	62.81 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.48 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	62.81 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.48 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	62.81 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.48 %
Unclassified	root	N/A	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000313\|WSSedB1CaDRAFT_10119386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	502	Open in IMG/M
3300001213\|JGIcombinedJ13530_100224278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	524	Open in IMG/M
3300009621\|Ga0116116_1176295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	553	Open in IMG/M
3300009635\|Ga0116117_1191105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	538	Open in IMG/M
3300009644\|Ga0116121_1187149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	657	Open in IMG/M
3300009762\|Ga0116130_1020819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2187	Open in IMG/M
3300014158\|Ga0181521_10584251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	525	Open in IMG/M
3300014160\|Ga0181517_10015189	All Organisms → cellular organisms → Bacteria → Proteobacteria	5611	Open in IMG/M
3300014160\|Ga0181517_10017972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	5014	Open in IMG/M
3300014160\|Ga0181517_10024017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4122	Open in IMG/M
3300014160\|Ga0181517_10266694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	910	Open in IMG/M
3300014160\|Ga0181517_10294762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	854	Open in IMG/M
3300014161\|Ga0181529_10003131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19144	Open in IMG/M
3300014161\|Ga0181529_10006354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12024	Open in IMG/M
3300014161\|Ga0181529_10016191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	6461	Open in IMG/M
3300014161\|Ga0181529_10031158	All Organisms → cellular organisms → Bacteria → Proteobacteria	4099	Open in IMG/M
3300014161\|Ga0181529_10202150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300014161\|Ga0181529_10276533	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300014161\|Ga0181529_10595102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	577	Open in IMG/M
3300014167\|Ga0181528_10503809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	666	Open in IMG/M
3300014168\|Ga0181534_10113420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1365	Open in IMG/M
3300014168\|Ga0181534_10364647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	792	Open in IMG/M
3300014168\|Ga0181534_10611683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	628	Open in IMG/M
3300014169\|Ga0181531_10333672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	929	Open in IMG/M
3300014199\|Ga0181535_10315242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	930	Open in IMG/M
3300014200\|Ga0181526_10557265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	725	Open in IMG/M
3300014201\|Ga0181537_10004697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11274	Open in IMG/M
3300014201\|Ga0181537_10143604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1635	Open in IMG/M
3300014490\|Ga0182010_10335558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	816	Open in IMG/M
3300014490\|Ga0182010_10751653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	551	Open in IMG/M
3300014491\|Ga0182014_10031203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4098	Open in IMG/M
3300014491\|Ga0182014_10346252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	752	Open in IMG/M
3300014492\|Ga0182013_10014435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7733	Open in IMG/M
3300014492\|Ga0182013_10264600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	986	Open in IMG/M
3300014496\|Ga0182011_10534552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	751	Open in IMG/M
3300014496\|Ga0182011_10939998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	537	Open in IMG/M
3300014498\|Ga0182019_10018912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	3732	Open in IMG/M
3300014498\|Ga0182019_10374714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	965	Open in IMG/M
3300014502\|Ga0182021_10340364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1772	Open in IMG/M
3300014502\|Ga0182021_10527211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1410	Open in IMG/M
3300014638\|Ga0181536_10392760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	622	Open in IMG/M
3300014638\|Ga0181536_10427901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	587	Open in IMG/M
3300014654\|Ga0181525_10236732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	996	Open in IMG/M
3300014657\|Ga0181522_10745256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	599	Open in IMG/M
3300014658\|Ga0181519_10591056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	684	Open in IMG/M
3300014838\|Ga0182030_10077539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4841	Open in IMG/M
3300016701\|Ga0181509_1131989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	523	Open in IMG/M
3300016728\|Ga0181500_1281127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	635	Open in IMG/M
3300017938\|Ga0187854_10470481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	523	Open in IMG/M
3300017946\|Ga0187879_10194287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1139	Open in IMG/M
3300017948\|Ga0187847_10007265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7708	Open in IMG/M
3300017948\|Ga0187847_10501212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	673	Open in IMG/M
3300017988\|Ga0181520_10004781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22281	Open in IMG/M
3300017988\|Ga0181520_10010118	All Organisms → cellular organisms → Bacteria → Proteobacteria	12757	Open in IMG/M
3300017988\|Ga0181520_10037430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	4903	Open in IMG/M
3300017988\|Ga0181520_10046433	All Organisms → cellular organisms → Bacteria → Proteobacteria	4203	Open in IMG/M
3300017988\|Ga0181520_10273473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1279	Open in IMG/M
3300017988\|Ga0181520_10497477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	864	Open in IMG/M
3300017988\|Ga0181520_10748558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	663	Open in IMG/M
3300017988\|Ga0181520_11079890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	528	Open in IMG/M
3300017988\|Ga0181520_11080129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	528	Open in IMG/M
3300018008\|Ga0187888_1334223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	578	Open in IMG/M
3300018035\|Ga0187875_10367619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	771	Open in IMG/M
3300018040\|Ga0187862_10266075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1096	Open in IMG/M
3300018040\|Ga0187862_10662950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	613	Open in IMG/M
3300018043\|Ga0187887_10027300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3624	Open in IMG/M
3300018046\|Ga0187851_10373255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	819	Open in IMG/M
3300018047\|Ga0187859_10075076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1780	Open in IMG/M
3300018088\|Ga0187771_10957257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	726	Open in IMG/M
3300018090\|Ga0187770_10165609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1691	Open in IMG/M
3300023090\|Ga0224558_1159678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	715	Open in IMG/M
3300023091\|Ga0224559_1054867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1563	Open in IMG/M
3300023091\|Ga0224559_1133489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	895	Open in IMG/M
3300026456\|Ga0255351_1052317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	831	Open in IMG/M
3300027905\|Ga0209415_10970527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	569	Open in IMG/M
3300028090\|Ga0255349_1056843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	776	Open in IMG/M
3300028745\|Ga0302267_10289910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	698	Open in IMG/M
3300028762\|Ga0302202_10149317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1256	Open in IMG/M
3300028765\|Ga0302198_10296735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	762	Open in IMG/M
3300028813\|Ga0302157_10616286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	558	Open in IMG/M
3300028867\|Ga0302146_10139433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	981	Open in IMG/M
3300029945\|Ga0311330_10302378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1379	Open in IMG/M
3300029945\|Ga0311330_10973581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	629	Open in IMG/M
3300029955\|Ga0311342_10755413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	756	Open in IMG/M
3300029957\|Ga0265324_10089718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1046	Open in IMG/M
3300030000\|Ga0311337_10689760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	882	Open in IMG/M
3300030225\|Ga0302196_10130140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1366	Open in IMG/M
3300031235\|Ga0265330_10021442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2949	Open in IMG/M
3300031235\|Ga0265330_10027426	All Organisms → cellular organisms → Bacteria → Proteobacteria	2573	Open in IMG/M
3300031235\|Ga0265330_10061249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M
3300031241\|Ga0265325_10081521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1608	Open in IMG/M
3300031241\|Ga0265325_10314007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	697	Open in IMG/M
3300031247\|Ga0265340_10224216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	842	Open in IMG/M
3300031249\|Ga0265339_10003084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11726	Open in IMG/M
3300031344\|Ga0265316_10064819	All Organisms → cellular organisms → Bacteria → Proteobacteria	2830	Open in IMG/M
3300031344\|Ga0265316_11210843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	522	Open in IMG/M
3300031524\|Ga0302320_10799070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1045	Open in IMG/M
3300031595\|Ga0265313_10155147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	976	Open in IMG/M
3300031708\|Ga0310686_104449218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4555	Open in IMG/M
3300031711\|Ga0265314_10141418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300031711\|Ga0265314_10281452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	941	Open in IMG/M
3300031712\|Ga0265342_10095203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1703	Open in IMG/M
3300032560\|Ga0316223_1161552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	739	Open in IMG/M
3300032668\|Ga0316230_1188204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	740	Open in IMG/M
3300032829\|Ga0335070_10109557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2875	Open in IMG/M
3300032829\|Ga0335070_10614058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1022	Open in IMG/M
3300032893\|Ga0335069_10025995	All Organisms → cellular organisms → Bacteria → Proteobacteria	8012	Open in IMG/M
3300032893\|Ga0335069_10246902	All Organisms → cellular organisms → Bacteria → Proteobacteria	2149	Open in IMG/M
3300033402\|Ga0326728_10030646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9116	Open in IMG/M
3300033402\|Ga0326728_10031725	All Organisms → cellular organisms → Bacteria → Proteobacteria	8859	Open in IMG/M
3300033402\|Ga0326728_10061768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5175	Open in IMG/M
3300033405\|Ga0326727_10055724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6076	Open in IMG/M
3300033405\|Ga0326727_11143819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	549	Open in IMG/M
3300033755\|Ga0371489_0000199	All Organisms → cellular organisms → Bacteria → Proteobacteria	119421	Open in IMG/M
3300033755\|Ga0371489_0016890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6141	Open in IMG/M
3300033755\|Ga0371489_0031462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3922	Open in IMG/M
3300033827\|Ga0334848_021571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1320	Open in IMG/M
3300033982\|Ga0371487_0059466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2175	Open in IMG/M
3300033983\|Ga0371488_0259140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	848	Open in IMG/M
3300034124\|Ga0370483_0348546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	513	Open in IMG/M
3300034282\|Ga0370492_0001887	Not Available	8291	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.43%
Host-Associated	Host-Associated	11.57%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	47.11%
Terrestrial	Environmental → Terrestrial	41.32%
Plants	Host-Associated → Plants	11.57%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.45%
Peat	Environmental → Terrestrial → Peat	22.31%
Soil	Environmental → Terrestrial → Soil	19.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.57%
Marine	Environmental → Aquatic → Marine	1.65%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	43.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.65%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	40.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.31%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.65%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.65%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	29.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	11.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.26%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	8.26%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	6.61%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.65%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1CaDRAFT_101193862	3300000313	Wetland	VSQPDSPPLSPISETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLASRQVSDPETGVEEASDCEMFGT
JGIcombinedJ13530_1002242781	3300001213	Wetland	MRPVSQPDSPPLSPISETLRRVTDELRKVTRRLEKVDDAVGRLVFEAAANKGAQFRDLQDLDRARQEVAGIAGFLERLAHDMPAEWVADSTNATLLIDLHELAASLAQRDASENGTSGDRADDCEMFV*
Ga0116116_11762951	3300009621	Peatland	VTDELRKVTRRLEKVDDAVGRLVFESASPRAPQFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLARPDCSDPDAGAEEASDCEMFGT*
Ga0116117_11911051	3300009635	Peatland	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDTNDSDAEPDEASDCEMFGT*
Ga0116121_11871491	3300009644	Peatland	PIGETLRRVTEELRKVTLRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLQELASSLAKPEANDSDSGPDEASDCEMFGT*
Ga0116130_10208191	3300009762	Peatland	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEIAGIAGFLERLARDMPAEWVADTNTASLLIDLHELAASLAQREANDSDSGPE
Ga0181521_105842511	3300014158	Bog	LSQPDSPPLSPIGETLRRVTEELRKVTRRLERVDNAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLQELASSLAKPEASESDSGPDEASDSEMFGA*
Ga0181517_100151893	3300014160	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLAKRNTNDSDAEPDEASDCEMFGT*
Ga0181517_100179722	3300014160	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLASSLAMRDADESDAEPGEASDCEMFGT*
Ga0181517_100240174	3300014160	Bog	VSQPDSPPLSPIGETLRRVTNELRKVTRRLERVDNAVGRLVFDAASPKGAHFHDLQDLDRAKQEVTGIASFLERLARDMPTEWVADSSTASLLIDLHELAASLAERDAGEPDAQPEKASDCEMFRT*
Ga0181517_102666942	3300014160	Bog	VSQPNSPPLSPIGETLRRVTDELRKVARRLERVDDAVGRLVFDAATVKGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPADWVADSRNASLLIDLHELAASLARREANESDAGPDGASDCEMFGT*
Ga0181517_102947622	3300014160	Bog	LSPIGATLQRVTEELHHVTHRLEKVDDAVGRLVFESARPAASYFHDLQDLDRARQEIVGIARFLERLARDMPAEWLADSKSASLLIDLQELASNLARHEARDCEKAQPAAHECEMF*
Ga0181529_1000313113	3300014161	Bog	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLAKRDAGDTDAAPDEASDCEMFGT*
Ga0181529_100063548	3300014161	Bog	LSPIGATLQRVTEELHHVTHRLEKVDDAVGRLVFESARPAASYFHDLQDLDRARQEIVGIARFLERLARDMPAEWLADSKSASLLIDLQELASSLARHEARDSEKTQPAAHECEMF*
Ga0181529_100161918	3300014161	Bog	VSQSVSPPLSPIGETLRRVTDELRKVTRRLEKVDNAVGRLVFDSATPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHELATSLAHSNAHESDVESDDASDCEMFGT*
Ga0181529_100311581	3300014161	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLAKRNTNDSGAEPDEASDCEMFGT*
Ga0181529_102021503	3300014161	Bog	VSQTDSPPLSPIGETLRRVTDELRKVTRRLERVENAVGRLVFEAASPKGTHFHDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSKTASLLIDLQELAASLAHREAHDPDVD
Ga0181529_102765332	3300014161	Bog	VKQSRKPALSPIGATLQRVTEELQRVTHRLEKVDDAVGRLVFESASPAGSYFHDLQDLDRARQEIAGIACFLERLARDMPEEWLADSKSVSLLIDLQELASSLARHEARDSEKAQSAAHECEMF*
Ga0181529_105951022	3300014161	Bog	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLAASLAMRDADESDAEPGDTSDCEMFGT*
Ga0181528_105038091	3300014167	Bog	VSQPNSPPLSPIGETLRRVTDELRKVARRLERVDDAVGPLVFDAATVKGTHFHDLQDLDRAKQEVAGIAGFLERLARDMPTEWVADSRNASLLIDLHELASSLARREANESDAEPDGASDCEMFGT*
Ga0181534_101134204	3300014168	Bog	VSQPNSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLAASLAMRDADESDAE
Ga0181534_103646472	3300014168	Bog	VSKSETPRLFPIGETLRRVTDELRKVSQRLEKVDEAVGRMVFDSASAGGAQFHDLQDLDRAQQEVAAIAGFLERLARDMPSEWVADSRTASLTIDLHELAVSLARREAKDGVGARRADGDCEMFS*
Ga0181534_106116832	3300014168	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDAASPRGPHFHDLQDLDRAKQEVAGIAGFLERLAHDMPVEWVADSNTATLMIDLHELATSLAKRDVDGSDAGPDEASDCEMFGA*
Ga0181531_103336722	3300014169	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDAASPRGPHFHDLQDLDRAKQEVAGIAGFLERLAHDMPVEWVADSNTATLMIDLHELATSLAKRDVDGSDAGPDEASDCEMFGT*
Ga0181535_103152422	3300014199	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDDAVGRLVFDAASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLIIDLHELAASLAQPEANDSDVGPGGASDCEMFA*
Ga0181526_105572651	3300014200	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLAKRDTNDSDAEPDEASDCEMFGT*
Ga0181537_1000469712	3300014201	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPADWVADSRNASLLIDLHELASSLARREANESDAEPDGASDCEMFGT*
Ga0181537_101436042	3300014201	Bog	VTDELRKVTRRLERVDDAVGKLVFDAAMPKGSHFHDLQDLDRAKQEVAGIAGFLERLAHDMPVEWVADSNTASLLIDLHELASSLAKREGSDSDAGADDANDCEMFGT*
Ga0182010_103355581	3300014490	Fen	MSQPEGPPLSPIGETLRRVTNELRKVTGRLERVDDAVGRLVFDSASRSAQFRDLQDLDRAKQEVAGIAGFLERLAHNMPSEWVADSNTASLMIDLHELANSLARHDACDGEISPGGADDCEMFV*
Ga0182010_107516532	3300014490	Fen	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLARRDAHDPDAEPGDAS
Ga0182014_100312032	3300014491	Bog	VTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAKRDGSDSETGVEEASDCEMFGT*
Ga0182014_103462521	3300014491	Bog	VSQPGSPPFSPIGETLRRVTNELRKVTRRLETVDDAVGRLVFESASRSAQFRDLQDLDRAKQEVAGIAGFLERLAHDMPSEWVADSNTASLMIDLHELANSLARHDACDGEISHGGADDCEMFV*
Ga0182013_100144351	3300014492	Bog	VSQSANHPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFETASPRTPQFRDLQDLDRARQEVAGIAHFLERLSRDMPSEWVADSNNASLLIDLQELATSLARSDPTDADPERAGPSDCEMFS*
Ga0182013_102646002	3300014492	Bog	VTDELRKVTHRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLIIDLHELAASLAKPEVTDSDAGPGGANDCEMFA*
Ga0182011_105345521	3300014496	Fen	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAHADAHESETAAGGTSDCDMFA*
Ga0182011_109399981	3300014496	Fen	MSQPGGPPFSPIGETLRRVTNELRKVTRRLETVDDAVGRLVFESASRSAQFRDLQDLDRAKQEVAGIAGFLERLAHDMPSEWVADSNTASLMIDLHELATSLAKNEMCGGKTSHGGDDDCEMFV*
Ga0182019_100189123	3300014498	Fen	MSQPGGPPFSPIGETLRRVTNELRKVTRRLETVDDAVGRLVFESASRSAQFRDLQDLDRAKQEVAGIAGFLERLAHDMPSEWVADSNTASLMIDLHELASSLAKNEMCDGET
Ga0182019_103747142	3300014498	Fen	VSQPDSPPLSPIGETLRRVTDELRKVTQRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAHADAHESETAAGGTSDCDMFA*
Ga0182021_103403644	3300014502	Fen	VSQPDSHPLSPIGETLRRVTDELRKVTLRLERVDDAVGRLVFDAASPRGPHFHDLQDLDRAKQEVSGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAHADAHESETAAGGTSDCDMFA*
Ga0182021_105272112	3300014502	Fen	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAKRDGSDSETGVEEASDCEMFGT*
Ga0181536_103927602	3300014638	Bog	GETLRRVTEELRKVTRRLERVDNAVGRLVFDAASVKGTHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSSNASLLIDLHELALSLAQREANDSDSGPDEASDCEMFGT*
Ga0181536_104279011	3300014638	Bog	RFPPIGETLRRVTDELRKVTRQQEKVDDAVGRLVFESASRNAQFRDLQDLDRAKQEVAGIAGFLERLACDMLAEWFADSNTATLPIDLHELSTSLAHREARESERARSERDDCELFA*
Ga0181525_102367322	3300014654	Bog	VSQPNSPPLSPIGETLRRVTDELRKVARRLERVDDAVGRLVFDAATVKGTHFHDLQDLDRAKQEVAGIAGFLERLARDMPTEWVADSRNASLLIDLHELASSLARREANESDAEPDGASDCEMFGT*
Ga0181522_107452561	3300014657	Bog	VSQPNSPPLSPIGETLRRVTDELRKVARRLERVDDAVGRLVFDAATVKGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPADWVADSRNASLLIDLHELAASLARREANESDAGPDGASDCEMFGT
Ga0181519_105910562	3300014658	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLAKR
Ga0182030_100775397	3300014838	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLIIDLHELAASLAKPEVTDSDAGPGGANDCEMFA*
Ga0181509_11319891	3300016701	Peatland	PLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLASSLAMRDADESDAEPGEASDCEMFGT
Ga0181500_12811272	3300016728	Peatland	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLASSLAMRDADES
Ga0187854_104704812	3300017938	Peatland	VAQSESPPLSPIGETLRRVTDELRKVTRRLEKVDDAVGRLVFESASPRAPQFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDMQELASSLAKREANDSDSGP
Ga0187879_101942872	3300017946	Peatland	VSQPDSPPLSPIGETLRRVTEELRKVTLRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLQELASSLAKPEANDSDSGPDEASDCEMFGT
Ga0187847_100072652	3300017948	Peatland	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDTNDSDAEPDEASDCEMFGT
Ga0187847_105012122	3300017948	Peatland	VSQPNSPPLSPIGETLRRVTDELRKVARRLERVDDAVGRLVFDAATVKGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPADWVADSRNASLLIDLHELAASLARREAN
Ga0181520_1000478116	3300017988	Bog	VRKSRKPALSPIGATLQRVTEELHHVTHRLEKVDDAVGRLVFESARPAASYFHDLQDLDRARQEIVGIARFLERLARDMPAEWLADSKSASLLIDLQELASSLARHEARDSEKTQPAAHECEMF
Ga0181520_1001011810	3300017988	Bog	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLAKRDAGDTDAAPDEASDCEMFGT
Ga0181520_100374302	3300017988	Bog	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHDLASSLAMRDADESDAEPGEASDCEMFGT
Ga0181520_100464333	3300017988	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLAKRNTNDSGAEPDEASDCEMFGT
Ga0181520_102734732	3300017988	Bog	VSQSVSPPLSPIGETLRRVTDELRKVTRRLEKVDNAVGRLVFDSATPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHELATSLAHSNAHESEAGSDDTSDCEMFGT
Ga0181520_104974772	3300017988	Bog	VSQTDSPPLSPIGETLRRVTDELRKVTRRLERVENAVGRLVFEAASPKGTHFHDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSKTASLLIDLQELAASLAHREAHDPDVDPGEASDCEMFGT
Ga0181520_107485582	3300017988	Bog	VKQSRKPALSPIGATLQRVTEELQRVTHRLEKVDDAVGRLVFESASPAGSYFHDLQDLDRARQEIAGIACFLERLARDMPEEWLADSKSASLLIDLQELASSLARHEARDSEKAQSAAHECEMF
Ga0181520_110798901	3300017988	Bog	VSQPDSPPLSPIGETLRRVTEELRKVTLRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVSGIAGFLERLARDMPVEWVADSNTATLLIDLHELALSLAKGDADDSDAGPGEASDCEMFGT
Ga0181520_110801291	3300017988	Bog	LRKVTRRLERVDNAVGRLVFDAASPRGPHFHDLQDLDRAKQEVSGIAGFLERLARDMPAEWVADSNTATLLIDLHELASSLATHGADDSDAEPDGASDCEMFGA
Ga0187888_13342232	3300018008	Peatland	VSQPDSPPLSPIGETLRRVTEELRKVTLRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLHELAASLAKRDTNDSDAEP
Ga0187875_103676191	3300018035	Peatland	PSRVSEDASVSQPDSPPLSPIGETLRRVTEELRKVTLRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLLIDLQELASSLAKPEANDSDSGPDEASDCEMFGT
Ga0187862_102660752	3300018040	Peatland	VSQPDSPPLSPIGETLRRVTEELRKVTRRLERVDNAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLQELASSLAKPEASESDSGPDEASDSEMFGA
Ga0187862_106629501	3300018040	Peatland	ETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEIAGIAGFLERLARDMPAEWVADSNTATLLIDLQELASSLAKPEANDSDSGPDEASDCEMFGT
Ga0187887_100273002	3300018043	Peatland	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDTNDSDAEPDEASDCEMFGT
Ga0187851_103732551	3300018046	Peatland	VSQSDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPRGKHFHDLQDLDRAKQEVSGIAGFLERLARDMPAEWVADSNTATLLIDLHDLAASLAKPDANDSDAEPGQASDCEMFGT
Ga0187859_100750761	3300018047	Peatland	ETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDTNDSDAEPDEASDCEMFGT
Ga0187771_109572572	3300018088	Tropical Peatland	RRVTEELRKVAQRLARVDDAVGRLVFESASPNGAYFRDLQDLDRARQEIAGIARFLERLASDMPGDWLADSKSASLFIDLHELASSLARHEAVDDKAAQGGADDCEML
Ga0187770_101656092	3300018090	Tropical Peatland	VKKSKKLLLSPIGATLRRVTEELRKVAQRLARVDDAVGRLVFESASPNGAYFRDLQDLDRARQEIAGIARFLERLASDMPGDWLADSKSASLFIDLHELASSLARHEAVDDKAAQGGADDCEML
Ga0224558_11596782	3300023090	Soil	SEDASVSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAKRDGSDSETGVEEASDCEMFGT
Ga0224559_10548673	3300023091	Soil	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELAASLAKRDGSDSETGVEEASDCEMFGT
Ga0224559_11334892	3300023091	Soil	VSQPDSHPLSPIGETLRRVTDELRKVTQRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLIIDLHELAASLAKPEANDPAAGPGGPNDCEMFA
Ga0255351_10523172	3300026456	Soil	SVSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLARRDTNEFDAEPDEASDCEMFGA
Ga0209415_109705271	3300027905	Peatlands Soil	VSQPDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLAHRDAHDPDAESGEASDCEMFGT
Ga0255349_10568431	3300028090	Soil	SPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLARRDTNEFDAEPDEASDCEMFGA
Ga0302267_102899101	3300028745	Bog	RKVARRLDRVDNAVGRLVFDAASPRGSQFHDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADTNTASLLIDLHELAASLAKRDVDDPEAGPEEASDCEMFGT
Ga0302202_101493171	3300028762	Bog	RKVARRLDRVDNAVGRLVFDAASPRGSQFHDLQDLDRAKQEVTGIAGFLERLAHDMPAEWVADTNTASLLIDLHELAASLAKRDVDDPEAGPEEASDCEMFGT
Ga0302198_102967351	3300028765	Bog	VSQPDSPPLSPIGETLRRVTDELRKVARRLDRVDNAVGRLVFDAASPRGSQFHDLQDLDRAKQEVTGIAGFLERLAHDMPAEWVADTNTASLLIDLHELAASLAKRDVDDPEAGPEEASDCEMFGT
Ga0302157_106162861	3300028813	Bog	GETLRRVTDELRKVTRRLERVDDAVGRLVFETASPRTPQFRDLQDLDRARQEVAGIAHFLERLSRDMPSEWVADSNNASLLIDLQELATSLARSDPTDADPERAGPSDCEMFS
Ga0302146_101394332	3300028867	Bog	VSQSANHPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFETASPRTPQFRDLQDLDRARQEVAGIAHFLERLSRDMPSEWVADSNNASLLIDLQELATSLARSDPTDADPERAGPSDCEM
Ga0311330_103023784	3300029945	Bog	ARRLDRVDNAVGRLVFDAASPRGSQFHDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADTNTASLLIDLHELAASLAKRDVDDPEAGPEEASDCEMFGT
Ga0311330_109735811	3300029945	Bog	VSQLDSPPLSPIGETLRRVTDELRKVTRRLERVDNAVGRLVFDAASPKGPHFHDLQDLDRAKQEVAGIASFLERLARDMPTEWVADSSTASLLIDLHELAASLAERD
Ga0311342_107554132	3300029955	Bog	VSQSANHPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFETASPRTPQFRDLQDLDRARQEVAGIAHFLERLSRDMPSEWVADSNNASLLIDLQELATSLARS
Ga0265324_100897181	3300029957	Rhizosphere	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLAAKRGGSDSETGVEEASDC
Ga0311337_106897602	3300030000	Fen	VSQPDSHPLSPIGETLRRVTDELRKVTHRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLAKRDAGDSDSSPNEASDCEMFGT
Ga0302196_101301403	3300030225	Bog	VSQPDSPPLSPIGETLRRVTDELRKVARRLDRVDNAVGRLVFDAASPRGSQFHDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADTNTASLLIDLHELAASLAKRDVDDPEAGPEEASDCEMFGT
Ga0265330_100214424	3300031235	Rhizosphere	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLATRDGSDSDAGPEEASDCEMFGT
Ga0265330_100274261	3300031235	Rhizosphere	VSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLAAKRGGSDSETGVEEASDCEMFGT
Ga0265330_100612492	3300031235	Rhizosphere	VSQSDSPPLSPIGETLRRVTDELRKITHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLAHRDAHDADAAPDEASDCEMFGT
Ga0265325_100815212	3300031241	Rhizosphere	VSQPISPPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDSAAVKGSHFHDLQDLDRAKQEVSGIAGFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDASDPNAESDSGSDCEMFGT
Ga0265325_103140071	3300031241	Rhizosphere	ETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLTHRDAHDADAEPGEASDCEMFGT
Ga0265340_102242162	3300031247	Rhizosphere	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLTHRDAHDADAEPGEASDCEMFGT
Ga0265339_100030847	3300031249	Rhizosphere	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLAAKRGGSDSETGVEEASDCEMFGT
Ga0265316_100648191	3300031344	Rhizosphere	HRLERVDDAVGRLVFDAASPRGAHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELATSLAHRDASEGDGSAIGGDECEMFA
Ga0265316_112108432	3300031344	Rhizosphere	LRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLMIDLHELAASLARRDAHDPDAEPGDASDCEMFGT
Ga0302320_107990702	3300031524	Bog	VSQPDSPPLSPIGETLRRVTNELRKVTRRLERVDNAVGRLVFDAASPKGAHFHDLQDLDRAKQEVTGIASFLERLARDMPTEWVADSSTASLLIDLHELAASLAERDAGEPDAQPEKASDCEMFRT
Ga0265313_101551471	3300031595	Rhizosphere	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGRLVFDSASPRGPHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTATLMIDLHELAASLATRDGSDS
Ga0310686_1044492185	3300031708	Soil	VSKFEIPPLSPISETLRRVADELRKVTRRLEKVDEAVGRMVFESASINGGAQFSDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSRTASLVIDLHELATSLAQRDAKESERAQGEGDDCEMFG
Ga0265314_101414181	3300031711	Rhizosphere	VSHPDSPPLSPIGETLRRVTDELRKVTRRLEKVDDAVGRLVFESAANKGAQFRDLQDLDRARQEVSGIAGFLERLAHDMPSEWVADSTTATLLIDLHELAASLAQRDASEGEGSAGGGDECEMFV
Ga0265314_102814522	3300031711	Rhizosphere	VSQPISPPLSPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDSAAVKGSHFHDLQDLDRAKQEVSGIAGFLERLARDMPAEWVADSNTATLLIDLHELAASLARRDASDPNAESD
Ga0265342_100952031	3300031712	Rhizosphere	VSQPVSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLAAKRGGSDSETGVEEASDCEMFGT
Ga0316223_11615521	3300032560	Freshwater	VSQPDSPPLSPIGETLRRVTDELRKVTHRLERVDNAVGKLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTASLLIDLHELAASLAAKRGGSDSETG
Ga0316230_11882041	3300032668	Freshwater	VSHPNSPPLSPISETLCRVTEELRKVTRRLERVDDAVGKLVFDSATSQGSQFRDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADSNTATLLIDLHELAASLAKRDGSDSDAGPEEASDCEMFGT
Ga0335070_101095572	3300032829	Soil	VSQPDIPPLSPISETLRRVTEELRKVTNRLERVDDAVGRLVFETVGNKGAQFRDLQDLDRAKQEVAGIAGFLERLAHDMPTEWVADSRTASLLIDLHELAASLAQREEAEGDVSRNDTDDCEMFS
Ga0335070_106140583	3300032829	Soil	VSQPDSPPLSPIGETLRRVTDELRKVTHRLEKVDDAVGRLVFEAASPRSGHFRDLQDLDRARQEVAGIAHFLERLSRDMPAEWVADSNTASLLIDLQELATSLARREAGESDPERG
Ga0335069_100259954	3300032893	Soil	VSQPDSPPLSPIGETLRRVTDELRKVTHRLEKVDDAVGRLVFEAASPRSGHFRDLQDLDRARQEVAGIAHFLERLSRDMPAEWVADSNTASLLIDLQELATSLARREAGESDPERGGSDDCDMFV
Ga0335069_102469022	3300032893	Soil	VSQPESPPLSPIGETLRRVTDELRKVTQRLERVDDAVGRLVFEAASPRSAHFRQLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSRTASLLIDLHELAANLARREAADPAAGPVDEDDCEMFA
Ga0326728_100306467	3300033402	Peat Soil	VKQSRKPALSPIGATLQRVTEELHRVTHRLEKVDDAVGRLVFESASPARSYFHDLQDLDRARQEIAGIASFLERLAREMPEEWLADSKSASLLIDLQELASSLARHEARDSEKAQSAAHECEMF
Ga0326728_1003172510	3300033402	Peat Soil	VTQSESPPLSPIGETLRRVTDELRKVTRRLEKVDNAVGRLVFDAASVKGTHFHDLQDLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLHELASSLAHSDAHDSDAESGGASDCEMFA
Ga0326728_100617684	3300033402	Peat Soil	VSQPDSPPLSPIGETLRRVTDELRKVTARLERVDDAVGRLVFDSASRNGAHLRDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSKTASLLIDLQELASSLARHEAGVSDDGPGGESDCEMFA
Ga0326727_100557245	3300033405	Peat Soil	VSQPDSPPLSPIGETLRRVTDELRKVTARLERVDDAVGRLVFDSASRNGAHLRDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSKTASLLIDLQELASSLAKHEASDSDNGPGGESDCEMFA
Ga0326727_111438192	3300033405	Peat Soil	VSQPDSPPLSPIGETLRRVTDELRKVTLRLERVDDAVGRLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADTNTASLLIDLHELAASLASRNADDSNAGRDESSD
Ga0371489_0000199_40853_41203	3300033755	Peat Soil	LSPIGATLQRVTEELHHVTHRLEKVDDAVGRLVFESARPAASYFHDLQDLDRARQEIVGIARFLERLARDMPAEWLADSKSASLLIDLQELASSLARHEARDSEKTQPAAHECEMF
Ga0371489_0016890_2587_2910	3300033755	Peat Soil	VTDELRKVTRRLDKVDDAVGRLVFESASPRAPQFNDLQNLDRAKQEVAGIAGFLERLARDMPAEWVADSNTASLLIDLDELATSLAHSDAHESETESGGASDCDLFA
Ga0371489_0031462_2418_2798	3300033755	Peat Soil	VSQPDSPPLSPIGETLRRVTDELRKVTLRLERVDDAVGRLVFDAASPRGSHFHDLQDLDRAKQEVAGIAGFLERLARDMPVEWVADTNTASLLIDLHELAASLASRNADDSNAGRDESSDYEMFGT
Ga0334848_021571_691_1065	3300033827	Soil	MSQPGGPPFSPIGETLRRVTNELRKVTRRLETVDDAVGRLVFESASRSAQFRDLQDLDRAKQEVAGIAGFLERLAHDMPSEWVADSNTASLMIDLHELANSLARHDACDGEISHGGADDCEMFV
Ga0371487_0059466_1_318	3300033982	Peat Soil	VKQSRKPALSPIGATLQRVTEELHRVTHRLEKVDDAVGRLVFESASPARSYFHDLQDLDRARQEIAGIASFLERLAREMPEEWLADSKSASLLIDLQELASSLARH
Ga0371488_0259140_498_848	3300033983	Peat Soil	SPIGETLRRVTDELRKVTRRLERVDDAVGRLVFDAASPRGSHFHELQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSNTATLLIDLHELAASLAKSEPGGPDAGPEEASDCEMFG
Ga0370483_0348546_93_479	3300034124	Untreated Peat Soil	MRPVSKSETPRLSPIGETLRRVSDELRKVSRRLEKVDEAVGRMVFDSVSAGGAQFHDLQDLDRAKQEVAGIAGFLERLADDMPAEWVADSRTASLMIDLHELATSLARREANEVAGALGAGDDCEMFV
Ga0370492_0001887_7822_8202	3300034282	Untreated Peat Soil	VSQTKSPPLSPIGETLRRVTDELRKVTARLERVDDAVGRLVFEAASPMALQFRDLQDLDRAKQEVAGIAGFLERLAHDMPAEWVADSKTASLLIDLQELASSLARRDAHESDAGPGGASDCEMFAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences