Metagenome / Metatranscriptome Family F071795

Overview

Basic Information

• Family ID: F071795
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 122
• Average Sequence Length: 59 residues
• Representative Sequence: MLVQPQQAATVCELDLVLHTIGSSKRAQTLDPNQRPENSHEPLNLTLDLEYAHVSS
• Number of Associated Samples: 106
• Number of Associated Scaffolds: 122

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 12.30 %
• % of genes near scaffold ends (potentially truncated): 67.21 %
• % of genes from short scaffolds (< 2000 bps): 95.08 %
• Associated GOLD sequencing projects: 99
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (53.279 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.016 % of family members)
• Environment Ontology (ENVO): Unclassified (36.066 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (57.377 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02371	Transposase_20	44.26
PF04138	GtrA	2.46
PF02705	K_trans	1.64
PF01527	HTH_Tnp_1	1.64
PF13358	DDE_3	1.64
PF07386	DUF1499	0.82
PF13480	Acetyltransf_6	0.82
PF03459	TOBE	0.82
PF04392	ABC_sub_bind	0.82
PF01734	Patatin	0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	44.26
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	1.64
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.82
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.82
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.82
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.82
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.82

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.28 %
Unclassified	root	N/A	46.72 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.28 %
Unclassified	root	N/A	46.72 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.28 %
Unclassified	root	N/A	46.72 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	46.72 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.44 %
Unclassified	root	N/A	46.72 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.30 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.64 %
Unclassified	root	N/A	46.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.82 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.10 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.64 %
Unclassified	root	N/A	46.72 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.82 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.82 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.82 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.82 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	1.64 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	4.10 %
Unclassified	root	N/A	46.72 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.82 %
Mesorhizobium qingshengii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium qingshengii	0.82 %
Methylocapsa palsarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	0.82 %
Paracoccus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans	1.64 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	4.10 %
Unclassified	root	N/A	46.72 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.82 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.82 %
Hyphomicrobium sp. GJ21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. GJ21	0.82 %
Mesorhizobium qingshengii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium qingshengii	0.82 %
Methylocapsa palsarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	0.82 %
Paracoccus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans	1.64 %
Rhizobium giardinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium giardinii	4.10 %
Unclassified	root	N/A	46.72 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001305|C688J14111_10111140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836
3300001369|JGI12701J14581_1006367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773
3300001978|JGI24747J21853_1014663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817
3300001979|JGI24740J21852_10186705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514
3300001991|JGI24743J22301_10009186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1748
3300002070|JGI24750J21931_1074377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium giardinii	558
3300002073|JGI24745J21846_1052257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520
3300002568|C688J35102_117921396	Not Available	515
3300002568|C688J35102_118470016	Not Available	562
3300002568|C688J35102_120459107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. GJ21	1086

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.64%
Host-Associated	Host-Associated	48.36%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.46%
Plants	Host-Associated → Plants	48.36%
Terrestrial	Environmental → Terrestrial	49.18%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.59%
Roots	Host-Associated → Plants → Roots	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%
Soil	Environmental → Terrestrial → Soil	49.18%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Loam	Environmental → Terrestrial → Soil → Loam	14.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300001369	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1	Environmental
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_101111401	3300001305	Soil	MLVQPQQAATVCELDLVLHTIGSSKRAQTLDPNQRPENSHEPLNLTLDLEYAHVSS
JGI12701J14581_10063671	3300001369	Forest Soil	MLVQPQQAATVCELDLVQRAIRSCKRAQASDPKQRPENCSEPLNLTLDFKHAHVSGH
JGI24747J21853_10146631	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSD
JGI24740J21852_101867052	3300001979	Corn Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVNDRSRSPAAGAW*
JGI24743J22301_100091861	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSDHRGV
JGI24750J21931_10743771	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVS
JGI24745J21846_10522571	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVNDRFDPLLQVLGD
C688J35102_1179213961	3300002568	Soil	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
C688J35102_1184700162	3300002568	Soil	GMLVQPQQAATVCEFDPVPHTIGSLERAQILDPNPRPENSHEPLDLTLDLEHAHVSDRSRSPAAGVW*
C688J35102_1204591072	3300002568	Soil	MLVQPQQAATVCELDLVQHAIIMERAQTLDPNQPPENSHAPNLTLDLEHADVSGRSRSSS
Ga0063454_1005787931	3300004081	Soil	GMLVQPQQAATVCELDLVQHAIIMERAQTLDPNQPPENSHEPLLTLDLEHADVSGRSRSSS*
Ga0062591_1008967701	3300004643	Soil	QPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0065712_103945231	3300005290	Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLKLTLDLEHAHVMVALDPLLQVLGDVMQ
Ga0070689_1002402403	3300005340	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPKLTAGELAHEPLNLTLDLEDAHVN*
Ga0070661_1006843092	3300005344	Corn Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLE
Ga0070668_1021409382	3300005347	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLNLTLD
Ga0070671_1012190561	3300005355	Switchgrass Rhizosphere	QQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0070674_1002586091	3300005356	Miscanthus Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAM*
Ga0070673_1002535961	3300005364	Switchgrass Rhizosphere	MLVQPQQAATVCEFDPVPHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVMVALDPLLQVLGDVMQRFSR*
Ga0070713_1003605121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDPVPHTIGSLERAQTLDPNPRPENSHGPLNLTLDLKHAHVKIALDPLLQVLGDVMER
Ga0070684_1004358052	3300005535	Corn Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLNLTLDLEYAHVSGRSRNAPRGSILSPKLH*
Ga0070684_1017959062	3300005535	Corn Rhizosphere	MLVQPQQAATVCEFDLVPHTIGSLERAQTLDPNPQPGSSHEPLDLTLDLEYAHVSDRSQCPAAGAW*
Ga0070684_1018758992	3300005535	Corn Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTL
Ga0070684_1023323201	3300005535	Corn Rhizosphere	MLVQPQQAATVCELDPVQHTIGSSKRAQTLDPNQPPENSHEPLNLTLDL
Ga0068853_1007083412	3300005539	Corn Rhizosphere	MLVQPQQAATVCELDPVQHTIGSSERAQTLDPNQRPENSHEPLNLTLDLEYAHVSGHSDWS*
Ga0070686_1016472471	3300005544	Switchgrass Rhizosphere	MLVQPQQAATVSELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0070665_1013147862	3300005548	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLKLTLDLEYAHVSGHPIDTGK*
Ga0070704_1021597221	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCELDLVQHAIRSWKRAQTLDSKQRPETAYEPLNLTLDLEYAHVSGLSLSMIRRRRLLSQ
Ga0070664_1010798922	3300005564	Corn Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN*
Ga0068857_1022968262	3300005577	Corn Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLKLTLDLEYAHVSGHQLRENRAAAALTIL*
Ga0066691_108137731	3300005586	Soil	MLVQPQQAATVCELDLVQHAIGSRKRAQTLDPKQRPENCHEPLNLTLDCGHAYVRGHSLLQTLAFARA*
Ga0070761_102616341	3300005591	Soil	MLVQPQQAATVCELDLVAHDIGSSKRAQTLDPNQPPETAHEPLNLTLDLEHAHVSSHSSVCDQIASWTT*
Ga0068856_1008468262	3300005614	Corn Rhizosphere	MLVQPQQAATVCELDPVQHTIGSSKRAQTLDPNQPPENSHEPLNLTPDLEHAHVGRHSVGVARQYCGQLGK
Ga0068864_1009002473	3300005618	Switchgrass Rhizosphere	CGMLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0068864_1009827722	3300005618	Switchgrass Rhizosphere	MLVQPQQAATVCELDPVQHTIGSLERAQTLDPNPQPGSSHEPLDLTLDLEY
Ga0068866_110860572	3300005718	Miscanthus Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHV
Ga0068863_1002113342	3300005841	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPKLTAGELAHEPLNLTLDLEHAHVN*
Ga0068863_1004745113	3300005841	Switchgrass Rhizosphere	MLVQPQQAATVCELDPVQHTIGSSKRAQTLDPNQPPENSHEPLNLTP*
Ga0068863_1024117031	3300005841	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVLHTIGSSKRAQTLDPNQRPENSHEPLNLTLDPEYAHVSSHS*
Ga0068858_1014214792	3300005842	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHV
Ga0068858_1016359551	3300005842	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQHVIRSRERAQTLDPKLTAGELAHEPLNLTLDLEHAHVN*
Ga0075028_1006083002	3300006050	Watersheds	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNGHSLTLP*
Ga0075425_1010202602	3300006854	Populus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVN
Ga0075426_104564181	3300006903	Populus Rhizosphere	MLVQPQQAATVCEFDPVPHTIGSLERAQTLDPNPRPESSHEPLDLTLDLEQPM*
Ga0111539_123310521	3300009094	Populus Rhizosphere	TVCELVPVQHVIGSLERAHTLDSNQPPENSHEPLNLTIDLEYAHVSGHFIE*
Ga0105245_110095052	3300009098	Miscanthus Rhizosphere	MLVRPQQAATVCELDLVQHTIVSSKRAQTLDPNQPPENSHEPLNLTLDLEYAPVNGRSRRDCRTAEVKP*
Ga0105247_113132761	3300009101	Switchgrass Rhizosphere	MLVQPQQAATVCEFDPVQHTIGSLERAQTLDPNPRPGSSHEPLNLTLDLEHAHVNGRS
Ga0111538_121226981	3300009156	Populus Rhizosphere	MLVQPQQAATVCEFDPVRHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVNGR
Ga0105241_114213762	3300009174	Corn Rhizosphere	MLVQPQPAVTVCEFDLVPHTIRSSKRPQTLDPNPPAGSSHEPLDLTLDRKHAVRAAGWVVSAAWL
Ga0105237_103767863	3300009545	Corn Rhizosphere	MLVQPQQAATVSELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN*
Ga0105238_103381342	3300009551	Corn Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSDR*
Ga0126374_117055881	3300009792	Tropical Forest Soil	MLVQPQQAATVCELDLMQHVIRSRERAQTLNPVLTAGELAHEPLNLTLDLEH
Ga0126373_102698511	3300010048	Tropical Forest Soil	MLVQPQQQAATVCELDLMQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN*
Ga0126373_116335081	3300010048	Tropical Forest Soil	MLVQPQQAATVCELDMVQRVIRSRKRAQTLDPEFTAGELAHEPLNLTLDLEHAHVN*
Ga0105239_111631612	3300010375	Corn Rhizosphere	MLVQPQQAVTVCEFDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0134124_116880871	3300010397	Terrestrial Soil	APPAERGMLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0126383_126977521	3300010398	Tropical Forest Soil	AATVCELDLVQHAIRSWKRAQTLDPNQRPENCHDPVNLTLDFEHAHVSRHSSKSQAAS*
Ga0134121_120883371	3300010401	Terrestrial Soil	PPAECGMLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLNLTP*
Ga0134123_119504551	3300010403	Terrestrial Soil	MLVQPQQAATVCEFDPVPHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVNDRSRSLAAGA*
Ga0126317_105708191	3300011332	Soil	MLVQPQQASTVCELDPVQHTIGSSKRAQTLDSNQPPENSYDPLNLTLDL
Ga0150985_1060423311	3300012212	Avena Fatua Rhizosphere	ECGMLVQPQPAATVCEFDLVPHTIGSLKRAQTLDPNPQPGSSHEPLDLTLDLEHAHVSDRSRSPVVGTC*
Ga0150985_1173900622	3300012212	Avena Fatua Rhizosphere	MLVQPLQAATVCELDLVQHAIRSWKRAQTLDPRQPPDNCHEPLNRTLDGEHAHVS
Ga0157293_102993401	3300012898	Soil	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTL
Ga0157289_103714032	3300012903	Soil	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLNLTLDLEYAHVSGALPPLTRRV*
Ga0157295_101833101	3300012906	Soil	MLVQPQQAATVCELDLVLHTIGSSKRAQTLDPNQPPENSHEPLNLTLDLKHAHVSG
Ga0157298_100924251	3300012913	Soil	MLVQPQQAATVCELDPVPHTIGSSKRAQTLDPNQPPENSHEPLNLTLDLEYAHVSGALPPLTRRV*
Ga0164300_104180432	3300012951	Soil	MLVQPQQAATVCELDPVPHTIGSLERAQTLDPNQPPENSHETLNQTLDLEYAHVSRYLSRNGTGLDARRR*
Ga0164303_113159631	3300012957	Soil	MLVQPQQAATVCEFDPVPHTIGSLERAQSLDPNQPPENSHETLNQTLDLEYAHVSRHSRYGTG
Ga0164309_109426241	3300012984	Soil	MLVQPQQAATVCELDMVPHAIGSSKRAQSLDPNQPPENSHEPLNLTLDLEYAHVSGRSQRDCRTAEVKP*
Ga0164304_108702461	3300012986	Soil	MLVQPQQAATVCEFDPVRHVIGSLERAQTLDPNPQPGSSHEPLDLTLALEHAHVNDRSRSSVAGAW*
Ga0164305_101252382	3300012989	Soil	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLE
Ga0157378_120348542	3300013297	Miscanthus Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVSDR*
Ga0157375_108057581	3300013308	Miscanthus Rhizosphere	MLVQPQQAATESELDLVQHVIRSRVRPQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0163163_109818572	3300014325	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQDVIGSSERAQTLDPNPQPGSSHEPLNLTLDLEYAPVNGRSRRDCRTAEVKP*
Ga0157379_126681831	3300014968	Switchgrass Rhizosphere	PQQAATVCELDLVLHTIGLSKRAQTLDPNQPPENSHEPLNLTLDLEYAPVNGRSRRDCRTAEVKP*
Ga0132258_101941187	3300015371	Arabidopsis Rhizosphere	VCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN*
Ga0132258_110893355	3300015371	Arabidopsis Rhizosphere	VCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN*
Ga0132256_1014944391	3300015372	Arabidopsis Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSQRAQTLDPNPQPGSSHEPLDLTLDLEYA
Ga0132256_1031408161	3300015372	Arabidopsis Rhizosphere	MLVQPQQAATVCELDLVQHAIGSSERAQTLDPNQRPENSHEPLNLTLDLEHAHVSSHLQKRGIFVFTL
Ga0182036_112127641	3300016270	Soil	MLVQPQQAATVCELDLVQHVIGSWKRAQTLDPNQRRENCPSTLNLTLDLEHAHVSR
Ga0163161_112258712	3300017792	Switchgrass Rhizosphere	DPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEYAPVNGRSRRDCRTAEVKP
Ga0163161_119655311	3300017792	Switchgrass Rhizosphere	MLVQPQQAATVCELDPVPHTIGSSKRAQTLDPNQPPENSHEPLNLTLDLEYAPVNGRSRRDCRTAEVK
Ga0163161_120860071	3300017792	Switchgrass Rhizosphere	MLVQPQQAATVCEVDPVQHVIGSLERAQTLDPNPRPESSHEPLERFSHQF
Ga0187817_110865251	3300017955	Freshwater Sediment	MLVQPQQAATVCELDLVQHAIGSTKPAQTLDPMPITETAHESLNPALDFKHAHVSCHTRADVVTMRPGRIG
Ga0187782_109100282	3300017975	Tropical Peatland	GMLVQPQQAATVCELDLVQHGIGSGQRAHTLDPTSTEAAHEPLNPALDFKYAHVSGPSYLGKLDFKLENW
Ga0190271_119584842	3300018481	Soil	MLVQPQQAATVCELDLVQHTIGSSKRAQTLDPNQAPEKSHEPLNLTLDLEYAHVSGHCAR
Ga0210395_100913441	3300020582	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNGHSYLLS
Ga0210401_101588072	3300020583	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNGHSLTLP
Ga0210405_103098721	3300021171	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVSGHSL
Ga0210396_114478121	3300021180	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNGHSLT
Ga0196959_100098092	3300021184	Soil	MLVQPQQAATVCEFDLVPHTIGSLERAQTLDPNPQPGSSHEPLDLTLTSN
Ga0210393_102058161	3300021401	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNGHSL
Ga0210391_102002742	3300021433	Soil	MLVQPQQTATVCELDLVQHDIGSWKRAQTLDPNQRPEDCHEPLNLTLDYGHAHVNSHSLLWS
Ga0126371_101437301	3300021560	Tropical Forest Soil	MLVQPQQQAATVCELDLMQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN
Ga0247745_10065702	3300022898	Soil	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSDRS
Ga0247802_10210342	3300023077	Soil	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSGHY
Ga0247695_10186922	3300024179	Soil	MLVQPQQAATVSELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEDAHVN
Ga0247660_10888061	3300024317	Soil	MLVQPQQAATVSELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLD
Ga0207656_100187081	3300025321	Corn Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVRRFSEL
Ga0207713_10663281	3300025735	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVNDRSR
Ga0207710_102625721	3300025900	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQHVIRSRERAQTLDPKLTAGELAHEPLNLTLDLEHAHVN
Ga0207644_105712351	3300025931	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQSLDPNQPPENSHEPLNLTLDLEYAPVNGRSRRDCRTAEVMVWTT
Ga0207690_111578412	3300025932	Corn Rhizosphere	LVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLYLTLDLKHAHVSGFPISLETSNRNG
Ga0207686_103149971	3300025934	Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVRRSLSP
Ga0207709_114252272	3300025935	Miscanthus Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSWPGC
Ga0207670_116787171	3300025936	Switchgrass Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVNDR
Ga0207661_107564221	3300025944	Corn Rhizosphere	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLYLTLD
Ga0207679_102832802	3300025945	Corn Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAM
Ga0207703_117082431	3300026035	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLED
Ga0207703_119775731	3300026035	Switchgrass Rhizosphere	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVSGFRLN
Ga0207708_113539321	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLVQPQQAATVCEFDPVQHVIGSLERAQTLDPNPRPESSHEPLNLTLDLEHAHVND
Ga0207641_102366252	3300026088	Switchgrass Rhizosphere	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDLEHAHVN
Ga0307318_103777222	3300028744	Soil	MLVQPQQAATVCEFDLVPHTIRSSKRAQTLDPNPPAGSSHEPLDLTLDLEYAHVNDRS
Ga0318572_109651281	3300031681	Soil	MLVQPQQAATVCGLDLVQHTIRSWKRAQTRIRTNRRSTAHEPVNLTLDFEHAHVSCHPAE
Ga0306918_105049642	3300031744	Soil	QQAATVCELDLVQHAIRSSKRAQTLDPNQRPENCHEPVNLTLDFEHAHVSGHSD
Ga0310904_100724671	3300031854	Soil	MLVQPQQAATVCEFDPVQHTIGSLERAQTLDPNPRPESSHGPLNLTLDLEY
Ga0310892_113317622	3300031858	Soil	MLVQPQQAATVCELDLVPHTIGSSKRAQTLDPNQPPENSHEPLKLTLDLEYAHV
Ga0306926_115523401	3300031954	Soil	LVQPQQAATVCELDLVQHAIRSSKRAQTLDPNQRPENCHEPVNLTLDFEHAHVSGHSD
Ga0306924_106673231	3300032076	Soil	MLVQPQQAATVCELDLVQHAIRSWKRAQTRIRTNRRSTAHEPVNLTLDFEHAHVSCHPAE
Ga0307472_1020832691	3300032205	Hardwood Forest Soil	MLVQPQQAATVCELDLVQHVIRSRERAQTLDPELTAGELAHEPLNLTLDL
Ga0306920_1015763531	3300032261	Soil	MLVQPQQAATVCELDLVQHAIRSSKRAQTLDPNQRPENCHEPVNLTLDFEHAHVSGHSD
Ga0373958_0122393_3_194	3300034819	Rhizosphere Soil	MLVQPQQAATVCEFDLVQHTIRSSKRAQTLDPNPQPGSSHEPLDLTLDLEYAHVNDRSRSSAAG