NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F071619

Metagenome Family F071619

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071619
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 59 residues
Representative Sequence MIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHK
Number of Associated Samples 85
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(9.836 % of family members)
Environment Ontology (ENVO) Unclassified
(59.016 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(80.328 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.
1JGI11643J11755_117248631
2JGI11643J11755_117379271
3JGI24737J22298_101469011
4JGI25406J46586_100471322
5soilL2_100165293
6soilH1_101108441
7Ga0062593_1007081652
8Ga0062590_1017322872
9Ga0062590_1028376231
10Ga0065704_108203702
11Ga0068869_1008809291
12Ga0070682_10000178916
13Ga0068868_1008932651
14Ga0068868_1021219821
15Ga0070689_1021984061
16Ga0070661_1008227501
17Ga0070692_105339942
18Ga0070692_113671673
19Ga0070673_1004414211
20Ga0070673_1006009241
21Ga0070701_100464074
22Ga0070701_112220702
23Ga0070700_1002476064
24Ga0070700_1019379182
25Ga0070694_1005285891
26Ga0070694_1015898461
27Ga0068867_1003922922
28Ga0070685_108003561
29Ga0070695_1005280551
30Ga0070664_1009039032
31Ga0070664_1012647061
32Ga0068857_1020888701
33Ga0068857_1021750582
34Ga0068854_1017985581
35Ga0070702_1018148352
36Ga0068852_1012863452
37Ga0068864_1009128631
38Ga0068864_1016532742
39Ga0068864_1019937542
40Ga0068851_100281675
41Ga0068870_111889991
42Ga0068863_1013924161
43Ga0068863_1015443511
44Ga0068858_1014584512
45Ga0068862_1006090102
46Ga0082029_14307481
47Ga0097621_1020208101
48Ga0097621_1023806732
49Ga0075428_1017067452
50Ga0075428_1025092021
51Ga0075433_116886601
52Ga0097620_1006869602
53Ga0075419_109760672
54Ga0105245_107683122
55Ga0105245_114491142
56Ga0105245_119604522
57Ga0075418_116798772
58Ga0105247_101320471
59Ga0105243_120742482
60Ga0105243_127011162
61Ga0075423_120556052
62Ga0105241_103973263
63Ga0105241_110896901
64Ga0105241_115614332
65Ga0105241_125760152
66Ga0105248_102144493
67Ga0105248_108520022
68Ga0105238_100389263
69Ga0105238_103225612
70Ga0134128_107783101
71Ga0134128_130720581
72Ga0134124_103143881
73Ga0134124_112342631
74Ga0134124_123324122
75Ga0134124_126571761
76Ga0134127_102651321
77Ga0134127_110229301
78Ga0134127_114513271
79Ga0134127_135242451
80Ga0164302_113550351
81Ga0157371_102489251
82Ga0157378_122467471
83Ga0163163_109238592
84Ga0163163_128041511
85Ga0182007_104305771
86Ga0132256_1024680131
87Ga0190274_119847441
88Ga0190274_132532242
89Ga0207697_102518912
90Ga0207710_103796121
91Ga0207643_103029532
92Ga0207654_104328811
93Ga0207671_101576231
94Ga0207657_106160161
95Ga0207649_108012192
96Ga0207694_1000054825
97Ga0207694_102466682
98Ga0207650_114860012
99Ga0207659_107900841
100Ga0207687_119226032
101Ga0207644_112072961
102Ga0207709_115022402
103Ga0207711_105588202
104Ga0207679_107390882
105Ga0207679_119063021
106Ga0207651_107104731
107Ga0207651_116663881
108Ga0207703_113776841
109Ga0207708_100771965
110Ga0207708_108634662
111Ga0207641_113235731
112Ga0207676_104179751
113Ga0207674_116886881
114Ga0207674_117355031
115Ga0207698_101650931
116Ga0209215_10134081
117Ga0209481_106589271
118Ga0268264_104376723
119Ga0310888_105690212
120Ga0310904_109804372
121Ga0307409_1026663042
122Ga0310890_108519561
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 39.51%    β-sheet: 7.41%    Coil/Unstructured: 53.09%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Terrestrial Soil
Termite Nest
Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
8.2%9.8%7.4%9.8%4.9%5.7%4.1%5.7%8.2%4.9%5.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J11755_1172486313300000787SoilMIQVXKWRLVFVCLLTLCACSVIQAQDRTIVISGSVV
JGI11643J11755_1173792713300000787SoilMAQVKNWRLVFVCLLTLCVCSLIHAQDRTIVISGTVVTPERVLSKGWVVIKHHKISAVWDRLPTEEDAVWVDTNDIIFP
JGI24737J22298_1014690113300001990Corn RhizosphereMNGGASMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSE
JGI25406J46586_1004713223300003203Tabebuia Heterophylla RhizosphereMIRVKKWRLVFVCLLTLWACAVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSDTRPNEEDAIWVDTMSLLRKRFSTRDGS*
soilL2_1001652933300003319Sugarcane Root And Bulk SoilMIQVRKWWLAVVCLITLFACSVLQAQDRTIVISGTVVTPEKVLNKGWVVIKQKKISAV
soilH1_1011084413300003321Sugarcane Root And Bulk SoilMIQVRKWWLAVVCLITLFACSVLQAQDRTIVISGAVVTPEKVLNKGW
Ga0062593_10070816523300004114SoilMTVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTPEKVLNKGWVVIKQKKISAVSDTLPTEENAIWVDTNDIIFPGFIDL
Ga0062590_10173228723300004157SoilMTQVKKWRLVFLCLLTLCACSLIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVS
Ga0062590_10283762313300004157SoilMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSDTLPQEDNAIWVDTSDIIF
Ga0065704_1082037023300005289Switchgrass RhizosphereMIQVRARWLVVVCLTLCACSVTQAQDRTIVISGTVVTPER
Ga0068869_10088092913300005334Miscanthus RhizosphereMIQVKKWRLAVVCLITLFACSAVAAQDRTIIISGAVVTPEKILNKGWVVIKQKKISAVLDSLPTEENAIWVDTNDIIFPGF
Ga0070682_100001789163300005337Corn RhizosphereMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVS
Ga0068868_10089326513300005338Miscanthus RhizosphereMNGGASMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGT
Ga0068868_10212198213300005338Miscanthus RhizosphereMTQVKKWRLVFVCLLTLCACSVTHAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLPNEEDAVWVDTNDIIFPGFID
Ga0070689_10219840613300005340Switchgrass RhizosphereMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKIS
Ga0070661_10082275013300005344Corn RhizosphereMIQVKKWRLVFVCLLLLCACWVLQAQDRTIVISGSVVTPEKVLNK
Ga0070692_1053399423300005345Corn, Switchgrass And Miscanthus RhizosphereMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLP
Ga0070692_1136716733300005345Corn, Switchgrass And Miscanthus RhizosphereMIQIKKLRLVFVCLLTICAGAVIHAQDRTIVISGSVVTPERVLNKGWVVIKH
Ga0070673_10044142113300005364Switchgrass RhizosphereMIQVKKWRLVFVCLLTICTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKK
Ga0070673_10060092413300005364Switchgrass RhizosphereMIQIKKWRLVFVCLLTLCACSIIQAQDRTIVISGSVVTPERVLNKGWIVIKHKKISTVSDTLPQEENAIW
Ga0070701_1004640743300005438Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLVFVCLLTLCTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVS
Ga0070701_1122207023300005438Corn, Switchgrass And Miscanthus RhizosphereMIQVKTRWLVVVCLITLCACAVIQAQDRTIVISGTVVTPG
Ga0070700_10024760643300005441Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVFNKGWVVIKHKKIS
Ga0070700_10193791823300005441Corn, Switchgrass And Miscanthus RhizosphereMIQVKTRWLVVVCLITLCACAVIQAQDRTIVISGTVVTPGKVLSKGWIVIKEKKIAAVTDQLPTEENA
Ga0070694_10052858913300005444Corn, Switchgrass And Miscanthus RhizosphereMIQIKKWRLVLVCLLTLWACSVIQAQERTIVISGSVVTPEKVLNKGWVVIK
Ga0070694_10158984613300005444Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLVFVCLVTLCACLVLQAQDRTIVISGTVVTPDKVLNKGWVVIKHKKISAVSDTLPTEENAIW
Ga0068867_10039229223300005459Miscanthus RhizosphereMTVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTPERVLNKGWVVIKHKK
Ga0070685_1080035613300005466Switchgrass RhizosphereMIQVKTRWLVVVCLITLCACAVIQAQDRTIVISGTVVTPGKVLSKGWVVIKEKKIAAVTDQLPTEENAI
Ga0070695_10052805513300005545Corn, Switchgrass And Miscanthus RhizosphereMTQVKKWRLVFVCLLTLCACSLIQAQDQTIVISGSVVTPEKVLNKGWVVIKHKKIS
Ga0070664_10090390323300005564Corn RhizosphereMIQIKRLRIVFACLITVCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKI
Ga0070664_10126470613300005564Corn RhizosphereMNQVRRLWLGVVCLITLCACSVIQAQDRTIVISGSVVTPEKVLNK
Ga0068857_10208887013300005577Corn RhizosphereMVQIKKWRLVFICLITLCACLVIRAQDQTIVISGTVVTPEKVLNKGWVVIKQKKISAVSDTLPNEENAIWV
Ga0068857_10217505823300005577Corn RhizosphereMIQVRKWRIGVVCLITLFACLVVKAQDRTIVISGTVVTPEKVLSKGWVVVRQKK
Ga0068854_10179855813300005578Corn RhizosphereMIQVKKWRLVFVCLLILCTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSDTLPNEENA
Ga0070702_10181483523300005615Corn, Switchgrass And Miscanthus RhizosphereMTQVKKWRLVFACLLTLWACSLVQAQDRTIVISGSVVTPERVLNK
Ga0068852_10128634523300005616Corn RhizosphereMIQVKTRWLVVVCLITLCACSVIQAQDRTIVISGTVVTPDKILSKGWVVIKEKKIAAVTDQLP
Ga0068864_10091286313300005618Switchgrass RhizosphereMIQVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTP
Ga0068864_10165327423300005618Switchgrass RhizosphereMIQIKRWRLVFVCLLTLCACSLIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLPNEEN
Ga0068864_10199375423300005618Switchgrass RhizosphereMIQVKKWRLVFVCLLTLCTGWVIQAQDRTIVISGTVVTPEKVLNKGW
Ga0068851_1002816753300005834Corn RhizosphereMIQVKKWRLVFVCLVTLCACLVLQAQDRTIVISGTVVTPDKVLNKGWVVIKHKK
Ga0068870_1118899913300005840Miscanthus RhizosphereMSQIKRWRIVFVCLITLCACSIIQAQDRTIVISGTVVTPEK
Ga0068863_10139241613300005841Switchgrass RhizosphereMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGTVVTPERVLNKGWVVIKHKKIS
Ga0068863_10154435113300005841Switchgrass RhizosphereMIPVRKWRTGVVCLITLFVCLVVKGQDRTIVISGTVVTPEKVLSKGWVVVRQKKISAVLDKIPKEENAIWIDTND
Ga0068858_10145845123300005842Switchgrass RhizosphereMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWIDTNDIIFPG
Ga0068862_10060901023300005844Switchgrass RhizosphereMTVKKWRLVFVCLITLFACSVFQAQDRTIVISGTVVTPEKVLNKGWVV
Ga0082029_143074813300006169Termite NestMIQVKKWRLVFVCLLTLCICWVTQAQDRTIVISGSVVTPDRVLNKGWVVIKQNKISAVSVTLPEEENAIWI
Ga0097621_10202081013300006237Miscanthus RhizosphereMIQVKKWRLVFVCLLILCTGWVIRAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSD
Ga0097621_10238067323300006237Miscanthus RhizosphereMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHK
Ga0075428_10170674523300006844Populus RhizosphereMIQLKKWRLVLICLLTLSACAVIQAQDRTIVISGSVVTPDRVLNKGWVVIKQ
Ga0075428_10250920213300006844Populus RhizosphereMIRVTKSRLVFVCLLTLYACPVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHQKISAVSDTLPKEENAIWVDTNDIIFPG
Ga0075433_1168866013300006852Populus RhizosphereMIQLKKSWLVVLCFITFCACSVLQAQDRTVVISGTVVTPEKVLSKGWVVIKHRKISAVSDKLPKEENAIWV
Ga0097620_10068696023300006931Switchgrass RhizosphereMTVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTP
Ga0075419_1097606723300006969Populus RhizosphereMIQLKKWRLVLICLLTLSACAVIQAQDRTIVISGSVVTP
Ga0105245_1076831223300009098Miscanthus RhizosphereMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVL
Ga0105245_1144911423300009098Miscanthus RhizosphereMIQVKKWRLVFLCLLTLCACSLIQAQDQTIVISGSVVTPEKVL
Ga0105245_1196045223300009098Miscanthus RhizosphereMIQIKKLRIVSVCLLILCAYSVFQAQDRTIIISGTVVTPEKVLNKGWVVIKHK
Ga0075418_1167987723300009100Populus RhizosphereMVQVKRWWLAVLCLITLCVGSAIQAQDRTIIVSGTVVT
Ga0105247_1013204713300009101Switchgrass RhizosphereMIPVRKWRTGVVCLITLFACLVVKGQDRTIVISGTVVTPEKVLSKG
Ga0105243_1207424823300009148Miscanthus RhizosphereMIQVKKWRLVFVCLLTLCTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKK
Ga0105243_1270111623300009148Miscanthus RhizosphereMIQVKKWRLVFVCLLTLCACSVIHAQDRTIVISGSVVTPKKVFNKGWVVIKHKKISAVSDTLPQEENAIWIDTNDIIFPG
Ga0075423_1205560523300009162Populus RhizosphereMIRIKKWQLVFVCLLTICACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSE
Ga0105241_1039732633300009174Corn RhizosphereMTVKKWRLVFVCLITLFACSVFQAQDRTIVISGTVVTPEKVLNKGW
Ga0105241_1108969013300009174Corn RhizosphereMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLPNEENDIWVDTNDIIFPGF
Ga0105241_1156143323300009174Corn RhizosphereMIQVKKWWLGVVCLITLCAFATGKAQDRTIVISGTVV
Ga0105241_1257601523300009174Corn RhizosphereMTQVKKWRLVFVCLLTLCACSLIQAQDQTIVISGSVVTP
Ga0105248_1021444933300009177Switchgrass RhizosphereMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGTVVTPERVLNKGWVVIK
Ga0105248_1085200223300009177Switchgrass RhizosphereMIQIKKWRLVFVCLLTLCTGSVIQGQDRTIVISGSVVTPEKVLNKGCVVIKHKK
Ga0105238_1003892633300009551Corn RhizosphereMIQVRKWRIGVVCLITLFACLVVKAQDRTIIISGTVVTPEKVLSKGWVVVRQKKISAVLDKIPCSNDS*
Ga0105238_1032256123300009551Corn RhizosphereMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKQKRITAVSDTLP
Ga0134128_1077831013300010373Terrestrial SoilMISVRKWRTGVVCLITLFACLAVKGQDRTIVISGTVVTPEKVLSKGWVVVRQKKISAVLDKIPKEEN
Ga0134128_1307205813300010373Terrestrial SoilMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKG
Ga0134124_1031438813300010397Terrestrial SoilMIQVKKWRLVFACLLTLWACSLVQAQDRTIVISGSVVTPEKVLNKG
Ga0134124_1123426313300010397Terrestrial SoilMIQVKKWRLVFVCLLILCACWVLQAQDRTIVISGSVVTPEKVLNKG
Ga0134124_1233241223300010397Terrestrial SoilQVKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAV*
Ga0134124_1265717613300010397Terrestrial SoilMIQVKKWRLVFVCLLILSACSVIQAQDRTIVISGSVVTPEKVFNKGWVVIKHKKISAVSDTLPQE
Ga0134127_1026513213300010399Terrestrial SoilMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGTVVTPEKVLSKGWVVIKHKKISAVSDTLPNEEDAV
Ga0134127_1102293013300010399Terrestrial SoilMNGGASMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWIDTNDIIFPGF
Ga0134127_1145132713300010399Terrestrial SoilMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGTVVTPEKVLNKGYVVIKHKKISAVSETLPNEENAIW
Ga0134127_1352424513300010399Terrestrial SoilMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVV
Ga0164302_1135503513300012961SoilMIQIKKWRVVFICLLTLCACSVIQAQDRTIVISGTVVTPEKVL
Ga0157371_1024892513300013102Corn RhizosphereMIQVKKWRLVFVCLLTLCTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSDTLPQEENAILVDTNDIIFPG
Ga0157378_1224674713300013297Miscanthus RhizosphereMIQVKKWRLVFACLLTLWACSLVQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLPTEEN
Ga0163163_1092385923300014325Switchgrass RhizosphereMIQVKKWRLVFACLLTLWACLLVQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSETLPTEEN
Ga0163163_1280415113300014325Switchgrass RhizosphereMIRMKKWQLVFVCLLTICACSVIQAQDRTIIISGSVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWIDTNDIIFPGFIDL
Ga0182007_1043057713300015262RhizosphereMIQVKKWRLVFVCLLTLCACALIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWLDTNDIIF
Ga0132256_10246801313300015372Arabidopsis RhizosphereMIQVKTRWLVVVCLITLCTCSVIQAQDRTIVISGTVVTPEKILNK
Ga0190274_1198474413300018476SoilMIQVKKWRLVFVCLLTLWACSVSPAQDRTIVISGSVVTPEKVLNKGWVVIKHKRISAVSDTLPK
Ga0190274_1325322423300018476SoilMIQIKKWRLVFVWLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKRISAVSDTLPK
Ga0207697_1025189123300025315Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLVFVCLVTLCACLVLQAQDRTIVISGTVVTPDKVLNKGWVVIKHKKISAVSDTLPTEENAIWVDT
Ga0207710_1037961213300025900Switchgrass RhizosphereMIRIRKWQLVCVWLLTLCTCSVIQAQDRTIVISGSVVTPEKVLSKGWVVIKHKKISAVAETLPNEENAIWVDTNDIIFPGFID
Ga0207643_1030295323300025908Miscanthus RhizosphereMTVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTPEKVLNKGWVVIK
Ga0207654_1043288113300025911Corn RhizosphereMIQIKKWRLVFVCLLTLCACSVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLP
Ga0207671_1015762313300025914Corn RhizosphereMIQVKKWRLVFVCLLTLCTGWVIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPQEENAI
Ga0207657_1061601613300025919Corn RhizosphereMIQIKRWRLVFVCILTLCACSLIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKKISAVSE
Ga0207649_1080121923300025920Corn RhizosphereMIQVKKWRLVFVCLLLLCACWVLQAQDRTIVISGSVVTPEKVLNKGWVVIKQKKISAVSDTLPTEENAIWVDTNDI
Ga0207694_10000548253300025924Corn RhizosphereMIQVRKWRIGVVCLITLFACLVVKAQDRTIIISGTVVTPEKVLSKGWVVVRQKKISAVLDKIPCSNDS
Ga0207694_1024666823300025924Corn RhizosphereMIQVKKWRLVFVCLLTLCACSVIQAQDRTIVISGSVVT
Ga0207650_1148600123300025925Switchgrass RhizosphereMNQVRRLWLGVVCLITLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVV
Ga0207659_1079008413300025926Miscanthus RhizosphereMTQVKKWRLVFVCLLTLCACSVTHAQDRTIVISGSVVTPEKVLNKGWVVIKH
Ga0207687_1192260323300025927Miscanthus RhizosphereMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGTVVTPEKVLNKGWVVIKQKKISAVSDTLP
Ga0207644_1120729613300025931Switchgrass RhizosphereMIQIKRWRLVFVCLLTLCACSLIQAQDRTIVISGSVVTPEKVLNKGW
Ga0207709_1150224023300025935Miscanthus RhizosphereMIQIKRWRLVFVWVLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHKRISAVSGTLPKEENAIWVD
Ga0207711_1055882023300025941Switchgrass RhizosphereMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGTVVTPDKILNKGWVVIKHKKISAVSDTLP
Ga0207679_1073908823300025945Corn RhizosphereMIQIKRLRIVFACLITVCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEE
Ga0207679_1190630213300025945Corn RhizosphereMIQIRKWWLGVVCLITLFACSAVAQDRTIIISGTVVTPGKILSKGWVVIKQ
Ga0207651_1071047313300025960Switchgrass RhizosphereMIQIKKWRLVFVWLLTLCACSVIQAQDRTIVISGSVVTPEKVLNKGWVVIKHEKIS
Ga0207651_1166638813300025960Switchgrass RhizosphereMIQVKKWRLAFFCLLTLWACSVIQAQDQTIVISGSVVTPEKVLNKGWVVIK
Ga0207703_1137768413300026035Switchgrass RhizosphereMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWIDTNDIIFPGF
Ga0207708_1007719653300026075Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLVFVCLVTLCACLVLQAQDRTIVISGTVVTPDKVLNKGWVVIKHKKISAVSDTLPTEENAI
Ga0207708_1086346623300026075Corn, Switchgrass And Miscanthus RhizosphereMIQVKKWRLEFVCLLTLCACSVIQAQDRTIVISGSVVTPEKVFNKGWVVIKHKKISAVSDTLPQEENAIW
Ga0207641_1132357313300026088Switchgrass RhizosphereMIQIKRLRIVFACLITLCACLIIQAQDRTIVISGTVVTPERVLNKGWVVIKHKKISAVSETLPAEENATWVDTTD
Ga0207676_1041797513300026095Switchgrass RhizosphereMIQVKKWRLVFVCLITLFACSVIQAQDRTIVISGTVVTPDKILNKGWVVIKHKKISAVSDTLPTEENAIWVDTNDIIFPG
Ga0207674_1168868813300026116Corn RhizosphereMVQIKKWRLVFICLITLCACLVIRAQDQTIVISGTVVTPEKVLNKGWVVIKQKKI
Ga0207674_1173550313300026116Corn RhizosphereMIRIKKWRLVFVCLLTLCACSVIQGQDRTIVISGSVVTPERVLNKGWVVIKHKKISAV
Ga0207698_1016509313300026142Corn RhizosphereMIQVKKWRLVFVCLLTLCACSVIQAQDRTIVISGS
Ga0209215_101340813300027266Forest SoilMIQIKKWRLIFVFVCLLTLCAGSVIQAQDRTIVISGTVVTPEKVINKGWVVIKH
Ga0209481_1065892713300027880Populus RhizosphereMIQLKKWRHVLICLLTLSACAVIQAQDRTIVISGSVVTPDR
Ga0268264_1043767233300028381Switchgrass RhizosphereMIQIKRWRIVFACLITLCACSIIQAQDRTIVISGTVVTPEKVLNKGWVVIKHKKISAVSETLPAEENAIWIDTN
Ga0310888_1056902123300031538SoilMIQTKKWRLVFICLITLCVCLVIQAQDRTIVISGTVVTPEKVFNKG
Ga0310904_1098043723300031854SoilMIQIKKWRLVFVCLLTLCACSIIQAQDRTIVISGSVVTPEKVLN
Ga0307409_10266630423300031995RhizosphereMIQIKKWRLVFVCLLTLCACSIIQAQDRTIVISGSVVTPEKILNKGWVVIKHKKIS
Ga0310890_1085195613300032075SoilMIQIKKWRLVFVCLLTLCACSIIQAQDRTIVISGSVVTPERVLNKGWVVIKHKKISAVSETLPNEEN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.