Metagenome / Metatranscriptome Family F071516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071516
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	46 residues
Representative Sequence	MSLAILPLPDDPTALRSFAVDLQAELARKDIEIAANAAEIHAKTL
Number of Associated Samples	112
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.38 %
% of genes near scaffold ends (potentially truncated)	92.62 %
% of genes from short scaffolds (< 2000 bps)	95.90 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.082 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (13.115 % of family members)
Environment Ontology (ENVO)	Unclassified (26.230 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.32% β-sheet: 0.00% Coil/Unstructured: 50.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF05717	TnpB_IS66	77.05
PF01527	HTH_Tnp_1	11.48
PF13817	DDE_Tnp_IS66_C	1.64
PF13408	Zn_ribbon_recom	0.82
PF00891	Methyltransf_2	0.82
PF13340	DUF4096	0.82
PF01609	DDE_Tnp_1	0.82
PF13007	LZ_Tnp_IS66	0.82
PF01526	DDE_Tnp_Tn3	0.82
PF07592	DDE_Tnp_ISAZ013	0.82
PF00753	Lactamase_B	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	77.05
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.82
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.82
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.82
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.82
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.82
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.08 %
Unclassified	root	N/A	4.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.08 %
Unclassified	root	N/A	4.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.08 %
Unclassified	root	N/A	4.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.80 %
Unclassified	root	N/A	4.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.89 %
Unclassified	root	N/A	4.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13.11 %
Unclassified	root	N/A	4.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	13.11 %
Unclassified	root	N/A	4.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Rhodovastum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum	12.30 %
Unclassified	root	N/A	4.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.82 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	12.30 %
Unclassified	root	N/A	4.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.82 %
Acidiphilium multivorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium multivorum	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	12.30 %
Unclassified	root	N/A	4.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
Cupriavidus sp. SK-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. SK-3	0.82 %
Acidiphilium multivorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium multivorum	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10403532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300001867\|JGI12627J18819_10096660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1221	Open in IMG/M
3300004081\|Ga0063454_102015273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300004082\|Ga0062384_100575107	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300004153\|Ga0063455_100075829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1280	Open in IMG/M
3300005093\|Ga0062594_102049622	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300005187\|Ga0066675_11129398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005327\|Ga0070658_11609674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300005328\|Ga0070676_10723930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300005329\|Ga0070683_100926976	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300005332\|Ga0066388_101029431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1383	Open in IMG/M
3300005437\|Ga0070710_10638338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300005542\|Ga0070732_10280979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300005568\|Ga0066703_10726337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300005602\|Ga0070762_10500710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	796	Open in IMG/M
3300005602\|Ga0070762_10835431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300006028\|Ga0070717_11411371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300006047\|Ga0075024_100045205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1829	Open in IMG/M
3300006047\|Ga0075024_100143907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300006052\|Ga0075029_100973375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300006174\|Ga0075014_100604489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300006176\|Ga0070765_100652812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300006237\|Ga0097621_102215660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300009144\|Ga0058702_10252593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300009500\|Ga0116229_10313743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1322	Open in IMG/M
3300009709\|Ga0116227_11151315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300010339\|Ga0074046_10823107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300010341\|Ga0074045_10438876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300010341\|Ga0074045_10612209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300010343\|Ga0074044_10037944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. SK-3	3355	Open in IMG/M
3300010343\|Ga0074044_10039115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3300	Open in IMG/M
3300010371\|Ga0134125_11075172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300010373\|Ga0134128_10512529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1337	Open in IMG/M
3300010395\|Ga0058701_10782668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300011119\|Ga0105246_11250226	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012498\|Ga0157345_1030875	Not Available	600	Open in IMG/M
3300012509\|Ga0157334_1056665	Not Available	555	Open in IMG/M
3300012683\|Ga0137398_10906329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012957\|Ga0164303_11227666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300012960\|Ga0164301_11545237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300012984\|Ga0164309_10840631	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300013308\|Ga0157375_11150447	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300014745\|Ga0157377_10810577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300015372\|Ga0132256_100109327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2707	Open in IMG/M
3300015374\|Ga0132255_105668877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300017656\|Ga0134112_10270372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300018067\|Ga0184611_1177938	Not Available	756	Open in IMG/M
3300018072\|Ga0184635_10274966	Not Available	665	Open in IMG/M
3300020582\|Ga0210395_10278607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1257	Open in IMG/M
3300020583\|Ga0210401_11454689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300021078\|Ga0210381_10109692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300021086\|Ga0179596_10342458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300021171\|Ga0210405_10300238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1269	Open in IMG/M
3300021180\|Ga0210396_10967059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300021377\|Ga0213874_10126382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300021441\|Ga0213871_10040723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300021441\|Ga0213871_10171966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300021444\|Ga0213878_10052837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1589	Open in IMG/M
3300025878\|Ga0209584_10037375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1693	Open in IMG/M
3300025914\|Ga0207671_10307365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1253	Open in IMG/M
3300025915\|Ga0207693_10353165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1150	Open in IMG/M
3300025941\|Ga0207711_11587371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300025944\|Ga0207661_11068056	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300026023\|Ga0207677_10863911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300026121\|Ga0207683_10791368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300026142\|Ga0207698_11821347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300027097\|Ga0208861_101026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300027257\|Ga0208996_1059832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300028268\|Ga0255348_1067723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300028566\|Ga0302147_10333037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300028574\|Ga0302153_10124643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	880	Open in IMG/M
3300028665\|Ga0302160_10045866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300028747\|Ga0302219_10321358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300028748\|Ga0302156_10130483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300028778\|Ga0307288_10114840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300028813\|Ga0302157_10151753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1376	Open in IMG/M
3300029636\|Ga0222749_10321653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300029911\|Ga0311361_10447508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1322	Open in IMG/M
3300029913\|Ga0311362_10434552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300029915\|Ga0311358_10330623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1272	Open in IMG/M
3300029920\|Ga0302142_1188347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300029922\|Ga0311363_11159823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300029954\|Ga0311331_11601193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300029956\|Ga0302150_10019112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2734	Open in IMG/M
3300029984\|Ga0311332_10368485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1111	Open in IMG/M
3300029990\|Ga0311336_10786351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300029992\|Ga0302276_10137784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1214	Open in IMG/M
3300030020\|Ga0311344_10375889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1319	Open in IMG/M
3300030020\|Ga0311344_10390696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1284	Open in IMG/M
3300030688\|Ga0311345_10331126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300030740\|Ga0265460_10941461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300030743\|Ga0265461_13202528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031057\|Ga0170834_108775484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1304	Open in IMG/M
3300031092\|Ga0308204_10365054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300031231\|Ga0170824_123223028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300031261\|Ga0302140_11134017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300031469\|Ga0170819_13698846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031472\|Ga0272437_1024905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5906	Open in IMG/M
3300031472\|Ga0272437_1306950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300031474\|Ga0170818_114991683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300031520\|Ga0272428_1159283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300031524\|Ga0302320_10613411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1267	Open in IMG/M
3300031708\|Ga0310686_104101566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1372	Open in IMG/M
3300031708\|Ga0310686_116698474	Not Available	850	Open in IMG/M
3300031880\|Ga0318544_10416295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300031938\|Ga0308175_102499620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	578	Open in IMG/M
3300031996\|Ga0308176_12074433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300032008\|Ga0318562_10460889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300032008\|Ga0318562_10687022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300032059\|Ga0318533_11350581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300032063\|Ga0318504_10131037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300032074\|Ga0308173_12234279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300032829\|Ga0335070_11655950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300033168\|Ga0272423_1162868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300033168\|Ga0272423_1165192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1034	Open in IMG/M
3300033402\|Ga0326728_10234173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300034127\|Ga0370489_0091149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300034129\|Ga0370493_0107197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300034159\|Ga0370509_0324384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300034163\|Ga0370515_0127883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium multivorum	1092	Open in IMG/M
3300034196\|Ga0370503_0089140	Not Available	1040	Open in IMG/M
3300034691\|Ga0370488_189626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.79%
Host-Associated	Host-Associated	17.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.23%
Plants	Host-Associated → Plants	17.21%
Aquatic	Environmental → Aquatic	6.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.28%
Peat	Environmental → Terrestrial → Peat	18.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.20%
Sediment	Environmental → Aquatic → Sediment	4.92%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	4.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.10%
Freshwater	Environmental → Aquatic → Freshwater	1.64%
Roots	Host-Associated → Plants → Roots	1.64%
Phylloplane	Host-Associated → Plants → Phylloplane	1.64%
Peat Moss	Host-Associated → Plants → Peat Moss	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.85%
Loam	Environmental → Terrestrial → Soil → Loam	12.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	4.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.46%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	4.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	4.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.10%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	4.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.28%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.64%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.82%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009144	Agave microbial communities from Guanajuato, Mexico - Or.Sf.e	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027097	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF019 (SPAdes)	Environmental	Open in IMG/M
3300027257	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033168	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand sud	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034159	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_0210_18	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034196	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_18	Environmental	Open in IMG/M
3300034691	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104035321	3300001661	Forest Soil	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAAEIH
JGI12627J18819_100966604	3300001867	Forest Soil	MSLATEPLPANPSVLRIFAADLQAELARKDIEIAANAAEI
Ga0063454_1020152731	3300004081	Soil	LVHSGMSLASIPLPSDPTALRAFAAGLQAELARKELEIAANAAEIHAKTLHIEK
Ga0062384_1005751073	3300004082	Bog Forest Soil	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAAEIHAKTLHI
Ga0063455_1000758293	3300004153	Soil	MFLANQPLPADPEALRAFAADLQAELARKDIELAANAAEIHAKTLHIEKL
Ga0062594_1020496221	3300005093	Soil	VSLANHPLPADPSALRVFAADLQAELARKNIELERKTIEIAANAAEIHAKTLHIEKLKM
Ga0066675_111293982	3300005187	Soil	MSLASLPLPSDPAALRALAAGLQAELARKELEIAANAAEIHAKTLHIEKLK
Ga0070658_116096741	3300005327	Corn Rhizosphere	MSLASMALPSDPAALRALAAGLQAELARKELEIAANAAEIH
Ga0070676_107239303	3300005328	Miscanthus Rhizosphere	LANHPLPADPSALRVFAADLQAELARKNIELAANAAEIHAKALHI
Ga0070683_1009269761	3300005329	Corn Rhizosphere	MSLASDALPTDPQELRQFAVSLQAELARKEIELAANAAEIHAKTLH
Ga0066388_1010294314	3300005332	Tropical Forest Soil	MSLATDPLPTNPSALRIFAADLQAELARKDIEIAANAAEIHA
Ga0070710_106383383	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LASLPLPSDPAALRALAAGLQAELARKELEIAANAAEIHAKTLHIEKLK
Ga0070732_102809791	3300005542	Surface Soil	MSLAILPLPDDPTALRSFAVDLQAELARKDIEIAANAAEI
Ga0066703_107263372	3300005568	Soil	MSLAHQPLPVDPQALQLFAADLQAELARKEIELAAN
Ga0070762_105007103	3300005602	Soil	MSLATEPLPANPSVLRIFAADLQAELARKDIEIAANADEIHAKTLHIEKLKM
Ga0070762_108354313	3300005602	Soil	MSLVNTPLPADPEALRRFAASLQAELARKDIEIAAH
Ga0070717_114113711	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLASLPLPSDPAALRALAAGLQAELARKELEIAANAA
Ga0075024_1000452052	3300006047	Watersheds	MSLATQPLPDDPTALRNFAVDLQAELARKDIEIAANAAEIHAKTLVSAQPG*
Ga0075024_1001439071	3300006047	Watersheds	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAAEIHAKTL
Ga0075029_1009733751	3300006052	Watersheds	MSLATDPLPANPSALRIFAADLQAELARKDIEIAANAAEIHAK
Ga0075014_1006044893	3300006174	Watersheds	VSLANSPLPSDPLALRIFAADLQAELARKDIELAANAAEI
Ga0070765_1006528121	3300006176	Soil	MSLANSPLPPDPEALRSFAVDLQAELARKEIELAANAAEIYAKTLHIEKL
Ga0097621_1022156601	3300006237	Miscanthus Rhizosphere	MSLATDPLPASPSALRIFAADLQAELARKDIEIAANA
Ga0058702_102525933	3300009144	Agave	MFLATHPLPADPAELRSFAVSLRAELARKDLELAAN
Ga0116229_103137434	3300009500	Host-Associated	MSLASAPLPTDPDALRLFAAGLQAELARKELEIAANAAEIHAKTLHIEKL
Ga0116227_111513151	3300009709	Host-Associated	MSLATHPLPTDPAELRRFAVGLQAELARKEIELAANAAEIHAKTLH
Ga0074046_108231071	3300010339	Bog Forest Soil	MSLAHHPLPTDPLALHLFAADLQAELARKEIELAANAAEIHAKTLHIEKLKMQ
Ga0074045_104388764	3300010341	Bog Forest Soil	MSLAHHPLPTDPQALHLFAADLQAELARKEIELAANAAEIHAKTLHIEKL
Ga0074045_106122093	3300010341	Bog Forest Soil	MSLAHHPLPSDPQALHLFAADLQAELARKEIELAANAAEIHAKTLHIEKL
Ga0074044_100379446	3300010343	Bog Forest Soil	MSLAHHPLPTDPQTLHLFAADLQAELARKEIELAANAAEIHAKTLHIEKLK
Ga0074044_100391153	3300010343	Bog Forest Soil	MSLAHHPLPTDPQALHLFAADLQAELARKEIELAANAAEIHAKTLHIE
Ga0134125_110751722	3300010371	Terrestrial Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDSEIAANAAEIHAKTRS*
Ga0134128_105125294	3300010373	Terrestrial Soil	MSLASMALPSDPAALRALAAGLQAELARKELEIAANAAEIHAKTL
Ga0058701_107826682	3300010395	Agave	VSLANHPLPTDLSALRSFAADLQAELARKTIELERKTIEIAANAADPRQDAAH*
Ga0105246_112502263	3300011119	Miscanthus Rhizosphere	MSLATLPLPDDPTALRDLAVDLQAELARKDSEIAANAAEIHAKTLHIEKL
Ga0157345_10308751	3300012498	Arabidopsis Rhizosphere	MSLASDPLPTDPEALRQFAAGLQTELARKEIEIAA
Ga0157334_10566651	3300012509	Soil	MSLASDPLPTDPEALRQFAAGLQTELARKEIEIAANAA
Ga0137398_109063291	3300012683	Vadose Zone Soil	MSLAILPLPDDPTALRSFAVDLQAELARKDIEIAANAAEIHAKTLHIEKLKMQL
Ga0164303_112276661	3300012957	Soil	MSLATLPLPDDPTALRDLAVDLQAELARKEIEIAANAAEIHAK
Ga0164301_115452372	3300012960	Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIHA
Ga0164309_108406313	3300012984	Soil	MSLASLPLRDDPDALRAFATGLQAELARRDIEITARDA
Ga0157375_111504473	3300013308	Miscanthus Rhizosphere	MHPLPADPAELRSFAVSLQAELARKDLELAANAAEIHA
Ga0157377_108105771	3300014745	Miscanthus Rhizosphere	MSLATLPLPDDPTALRDLAVDLQAELACKDIEIAANAAEIHAKTLHIEKLKMQLA
Ga0132256_1001093274	3300015372	Arabidopsis Rhizosphere	MSLATLPLPDDPTALRDLAVDLQAELARKDSEIAANAAEIHAKTLHIEKLK
Ga0132255_1056688771	3300015374	Arabidopsis Rhizosphere	MSLATLQLPDDPTALRNLAVDLQAELARKDIEIAANAAEIYAK
Ga0134112_102703721	3300017656	Grasslands Soil	MSLASLPLPSDPAALRALAAGLQAELARKELEIAANAAEIY
Ga0184611_11779382	3300018067	Groundwater Sediment	DDPTALRNLAVGLQAELARKDIEIAANAAEIHAKSKRSPCHV
Ga0184635_102749661	3300018072	Groundwater Sediment	LPLTDDPTALRNLAVGLQAELARKDIEIAANAAEIHAKSKRSPCHV
Ga0210395_102786074	3300020582	Soil	MSLATEPLPANPSVLRIFAADLQAELARKDIEIAANAAEIHAKTLHI
Ga0210401_114546892	3300020583	Soil	MSLATDPLPANPSALRIFAADLRAELARKDIEVAANSAEIP
Ga0210381_101096923	3300021078	Groundwater Sediment	MSLANLPLPDDPTALRNLAVDLQAELARKDIEIAANAAEIHAKTLH
Ga0179596_103424583	3300021086	Vadose Zone Soil	MSLAILPLPDDPSALRSFAVDLQAELARKDIEIAANAA
Ga0210405_103002384	3300021171	Soil	MSLATLPLPDDPTALRSFAVDLQAELARRDIEIAANAA
Ga0210396_109670591	3300021180	Soil	MSLATEPLPANPSALRIFAADLQAELARKDIEIAANA
Ga0213874_101263821	3300021377	Plant Roots	MSLASAPLPTDPEALRVFAANLQAELARKDLEIAANAAEIH
Ga0213871_100407231	3300021441	Rhizosphere	MSLAHQPLPADPQALQLFAADLQAELARKEIELAANAAEIYAKTLHIE
Ga0213871_101719663	3300021441	Rhizosphere	MSLASMPLPSDPTALRALAAGLQAELARKELEIAAN
Ga0213878_100528372	3300021444	Bulk Soil	MSLASVPLPDDPTALRVLAASLQAELARKDMEMQKS
Ga0209584_100373754	3300025878	Arctic Peat Soil	MSLVNSPLPTDPQALRSFAADLQAELARKDIEIAANAAEIHAKTLHIEQ
Ga0207671_103073651	3300025914	Corn Rhizosphere	VSLANHPLPADPSALRVFAADLQAELARKNIELERKT
Ga0207693_103531653	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSLATLPLPDDPTALRDLAVDLQAELARKDSEIAANAAEIHAKTL
Ga0207711_115873712	3300025941	Switchgrass Rhizosphere	MSLATDPLPASPSALRIFAADLQAELARKDIEIAASAAEIHAKALHIEKLKMQLAV
Ga0207661_110680561	3300025944	Corn Rhizosphere	MHPLPADPAELRSFAVSLQAELARKDIELAANAAEIHAKTL
Ga0207677_108639111	3300026023	Miscanthus Rhizosphere	MHPLPADPAELRSFAVSLQAELARKDIELAANAAE
Ga0207683_107913681	3300026121	Miscanthus Rhizosphere	MSLATEPLPANPSALRIFAAGLQAELARKDIEIAANAA
Ga0207698_118213472	3300026142	Corn Rhizosphere	MSLATEPLPANPSALRIFAAGLQAELARKDIEIAANAAEIHAKTL
Ga0208861_1010261	3300027097	Forest Soil	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAAEIHAKT
Ga0208996_10598321	3300027257	Forest Soil	MSLASAPLPIDLDALRAFAAELQAELARKDIEIAANAAEIYAKFAASHADKDFSAVIETL
Ga0255348_10677232	3300028268	Soil	MSLATEPLPVDPAALRAFAADLQAELARKDIELAANAAEIHAKTLHIEKLK
Ga0302147_103330371	3300028566	Bog	MSLATNPLPADLPALRAFAAELQAELARKDIELAANAAEIHPRQERV
Ga0302153_101246431	3300028574	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTL
Ga0302160_100458663	3300028665	Fen	MSLVHHPLPTDPQALRAFAADLQAELAHRDIELARKDIELAANAAEIHAK
Ga0302219_103213582	3300028747	Palsa	MSLVSEPLPTDLDALRLFAENLQAELARKDREIAANAAEIYAKTLH
Ga0302156_101304831	3300028748	Bog	MSLAHHPLPTDPQALHLFAADLQAELARKEIELAANAAEI
Ga0307288_101148401	3300028778	Soil	MSLATEPLPANPSALRIFAAGLQAELARKDIEIAA
Ga0302157_101517531	3300028813	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIE
Ga0222749_103216533	3300029636	Soil	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAAEI
Ga0311361_104475084	3300029911	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIEKLKMQLA
Ga0311362_104345523	3300029913	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKT
Ga0311358_103306234	3300029915	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAE
Ga0302142_11883471	3300029920	Bog	VSLANHPLPTNPRALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIEKLKMQ
Ga0311363_111598231	3300029922	Fen	MSLASHPIPNEFEALRSFAANLQSELARKEIEIAANA
Ga0311331_116011932	3300029954	Bog	MSLAHHPLPTDPQALHLFAADLQAELARKEIELAANA
Ga0302150_100191121	3300029956	Bog	MSLATEPLPVDPAALRAFAADLQAELARKDIELAANAAEIHAKTLHIE
Ga0311332_103684851	3300029984	Fen	MSLVHHPLPTDPQALRAFAADLQAELAHRDIELARKDIELAANAAEIH
Ga0311336_107863511	3300029990	Fen	MQPLPADPAELRSFAAGLQAELARKDIELAANAAEIHAKTL
Ga0302276_101377843	3300029992	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIEK
Ga0311344_103758893	3300030020	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIEKLKMQLATLR
Ga0311344_103906961	3300030020	Bog	MSLAHHPLPTDPQALQLFAAALQAELARKEIELAANAAEIHAKTLH
Ga0311345_103311264	3300030688	Bog	VSLANHPLPTNPRALRSFAADLQAELARKDTELARKDIELERKDIEIAANAAEIY
Ga0265460_109414611	3300030740	Soil	MSLATLPLPDDPTELRDLAVDLQAELARKDIEIAANAA
Ga0265461_132025281	3300030743	Soil	MSLATLPLPDDPTALRNFAVDLQAELARRDIEIAANAAEIHAKT
Ga0170834_1087754844	3300031057	Forest Soil	MSLAILPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIHAKTLHIEKLK
Ga0308204_103650542	3300031092	Soil	MSLATLPLPDDPTALRNLAEGLQAELARKDIEIAANAAEIHAK
Ga0170824_1232230281	3300031231	Forest Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIHAKTLHIEKLK
Ga0302140_111340171	3300031261	Bog	VSLANHPLPTDPSALRIFAADLQAELARKDIELERKDIEIAANAAEIYAKTLHIEKLKMQ
Ga0170819_136988461	3300031469	Forest Soil	MSLAILPLPDDPTALRSFAVDLQAELARKDIEIAANAAEIHAKTL
Ga0272437_10249052	3300031472	Rock	MSLASAPLSIGLDALRAFAADLQAELARKDVEIAANAAEILPRRCTSRS
Ga0272437_13069502	3300031472	Rock	MSLASVPLPIDLDALRAFAADLQSELARKDIEITANAAEIYAKTLHIRS
Ga0170818_1149916831	3300031474	Forest Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIH
Ga0272428_11592831	3300031520	Rock	MSLAHDPLPSDPEVLRAFAAGLQAELARKDVQIAANAAEIHAKTLHIEKLRMQL
Ga0302320_106134114	3300031524	Bog	MSLAHHPLPTDPQALHLFAADLQAELARKEIELAANAAEIHAKTLHIEKLKMQ
Ga0310686_1041015663	3300031708	Soil	MSLATLPLPDDPIALRNLAVDLQAELARKDIEIAVNAAEIHAKTLYIEKLKMQLA
Ga0310686_1166984741	3300031708	Soil	MSLMTLPLPEDPDALRSFAADLQAELARKDIEILARDAEIHAKTLRIEKLKR
Ga0318544_104162952	3300031880	Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIHAKT
Ga0308175_1024996201	3300031938	Soil	LAGWAMSLASMPLPSDPAALRALAAGLQAELARKELQIAANAAEIHAKTLHIE
Ga0308176_120744331	3300031996	Soil	MSLASTPLPSDPAALRALAAGLQAELARKELEIAANAAEIHAKTLHIEKLKVEL
Ga0318562_104608891	3300032008	Soil	MSLATDPLPANLSALRIFAADLQAELARKDIEIAANAAEIHA
Ga0318562_106870221	3300032008	Soil	MSLAIQPLPEDPDALRRFAADLQAELARKTIEITARDAEIHAKTLHIE
Ga0318533_113505811	3300032059	Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAA
Ga0318504_101310373	3300032063	Soil	MSLATLPLPDDPTALRDLAVDLQAELARKDIEIAANAAEIHAKTLHIEKLKMQ
Ga0308173_122342791	3300032074	Soil	MSLASLPLPSDPAALRALAAGLQAELARKELEIAANAAEIHAKTLHI
Ga0335070_116559502	3300032829	Soil	MSLANQPLPADPEALRAFAADLQAELARKDIELAANAAE
Ga0272423_11628683	3300033168	Rock	MFLAIQPLPEDPDALRGFAAELQAELARKEIEITAR
Ga0272423_11651923	3300033168	Rock	MSLAIQPLPADPDALRGFAAELQAELARKDIEITARDAEIHAKT
Ga0326728_102341731	3300033402	Peat Soil	LAHHPLPTDPQALQLFAAALQAELARKEIEIAANAAEIHAKTLHIEKLKMQLA
Ga0370489_0091149_1_177	3300034127	Untreated Peat Soil	VSLANHPLPTDPSALRIFAADLQAELARKNIELERKTIEIAANAAEIHAKTVHIEKLKI
Ga0370493_0107197_747_896	3300034129	Untreated Peat Soil	MSLVHQPLPADPQALRAFAADLQAELAHRDTELAHRDTELAHRDIELAHR
Ga0370509_0324384_1_120	3300034159	Untreated Peat Soil	MSLATRPLPDDAPALRALAAELQAELARKEIELAANAAEI
Ga0370515_0127883_1_111	3300034163	Untreated Peat Soil	VSLANSPLPSDPLALRIFAAGLQTELARKDIELAANA
Ga0370503_0089140_1_135	3300034196	Untreated Peat Soil	PTDPQALRAFAADLQAELARKDIELAANAAEIHAKTLHHCCPVR
Ga0370488_189626_2_148	3300034691	Untreated Peat Soil	MSLATSPLPTDPQALRSFAADLQAEIVRKNDELARKDIEIAANAAEIHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences