Metagenome / Metatranscriptome Family F071451

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071451
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	85 residues
Representative Sequence	AIGNWPMTIIILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT
Number of Associated Samples	87
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.54 %
% of genes from short scaffolds (< 2000 bps)	94.26 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (41.803 % of family members)
Environment Ontology (ENVO)	Unclassified (34.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.820 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.45% β-sheet: 0.00% Coil/Unstructured: 63.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00005	ABC_tran	84.43
PF12399	BCA_ABC_TP_C	13.11
PF00378	ECH_1	0.82
PF04909	Amidohydro_2	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.15 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.15 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.57 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.30 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.28 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	12.30 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.28 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	12.30 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1.64 %
Embleya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya	1.64 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	12.30 %
Embleya scabrispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya scabrispora	1.64 %
Streptacidiphilus rugosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus rugosus	1.64 %
bacterium HR31	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100649717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	932	Open in IMG/M
3300002245\|JGIcombinedJ26739_100814965	Not Available	814	Open in IMG/M
3300002245\|JGIcombinedJ26739_101270091	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300004080\|Ga0062385_11013339	Not Available	558	Open in IMG/M
3300004092\|Ga0062389_102938390	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006176\|Ga0070765_100171087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1953	Open in IMG/M
3300006176\|Ga0070765_101043038	Not Available	773	Open in IMG/M
3300009628\|Ga0116125_1258455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus rugosus	507	Open in IMG/M
3300009700\|Ga0116217_10479316	Not Available	783	Open in IMG/M
3300010379\|Ga0136449_102676392	Not Available	709	Open in IMG/M
3300014162\|Ga0181538_10031655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3489	Open in IMG/M
3300014164\|Ga0181532_10132205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520	Open in IMG/M
3300014168\|Ga0181534_10433159	Not Available	733	Open in IMG/M
3300014489\|Ga0182018_10484711	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300014493\|Ga0182016_10849197	Not Available	506	Open in IMG/M
3300014495\|Ga0182015_10176947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1437	Open in IMG/M
3300014495\|Ga0182015_10248378	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300014499\|Ga0182012_10681599	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300014501\|Ga0182024_10507190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1532	Open in IMG/M
3300014501\|Ga0182024_12137153	Not Available	615	Open in IMG/M
3300014501\|Ga0182024_12400063	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300014501\|Ga0182024_12824523	Not Available	516	Open in IMG/M
3300014638\|Ga0181536_10290166	Not Available	765	Open in IMG/M
3300014654\|Ga0181525_10219743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1037	Open in IMG/M
3300014654\|Ga0181525_10611629	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300014655\|Ga0181516_10417794	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300014657\|Ga0181522_10178888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300018009\|Ga0187884_10459143	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300018016\|Ga0187880_1045386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2378	Open in IMG/M
3300018037\|Ga0187883_10604160	Not Available	569	Open in IMG/M
3300018043\|Ga0187887_10106634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya scabrispora	1687	Open in IMG/M
3300018043\|Ga0187887_10353833	Not Available	867	Open in IMG/M
3300018047\|Ga0187859_10866228	Not Available	520	Open in IMG/M
3300018057\|Ga0187858_10160233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1494	Open in IMG/M
3300018085\|Ga0187772_10676626	Not Available	739	Open in IMG/M
3300021180\|Ga0210396_11744670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus rugosus	505	Open in IMG/M
3300021181\|Ga0210388_11690601	Not Available	524	Open in IMG/M
3300021401\|Ga0210393_11696095	Not Available	500	Open in IMG/M
3300021477\|Ga0210398_10875252	Not Available	721	Open in IMG/M
3300021559\|Ga0210409_11264664	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR31	614	Open in IMG/M
3300022840\|Ga0224549_1024295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	830	Open in IMG/M
3300024225\|Ga0224572_1031979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1003	Open in IMG/M
3300027370\|Ga0209010_1069308	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027575\|Ga0209525_1162641	Not Available	506	Open in IMG/M
3300027604\|Ga0208324_1141502	Not Available	658	Open in IMG/M
3300027648\|Ga0209420_1151526	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300027652\|Ga0209007_1162052	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027684\|Ga0209626_1149549	Not Available	616	Open in IMG/M
3300027879\|Ga0209169_10441020	Not Available	684	Open in IMG/M
3300027884\|Ga0209275_10292921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	902	Open in IMG/M
3300027915\|Ga0209069_11043694	Not Available	504	Open in IMG/M
3300028762\|Ga0302202_10463870	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300028773\|Ga0302234_10463266	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300028780\|Ga0302225_10059293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1886	Open in IMG/M
3300028780\|Ga0302225_10554864	Not Available	534	Open in IMG/M
3300028781\|Ga0302223_10317630	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300028789\|Ga0302232_10611747	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300028806\|Ga0302221_10078103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300028813\|Ga0302157_10254021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	980	Open in IMG/M
3300028863\|Ga0302218_10308500	Not Available	514	Open in IMG/M
3300028879\|Ga0302229_10317442	Not Available	699	Open in IMG/M
3300028879\|Ga0302229_10331639	Not Available	681	Open in IMG/M
3300029907\|Ga0311329_10827203	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300029910\|Ga0311369_10635714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	885	Open in IMG/M
3300029911\|Ga0311361_11327950	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300029913\|Ga0311362_10881598	Not Available	722	Open in IMG/M
3300029944\|Ga0311352_10158722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300029944\|Ga0311352_10735429	Not Available	776	Open in IMG/M
3300029951\|Ga0311371_11387036	Not Available	793	Open in IMG/M
3300029951\|Ga0311371_11664199	Not Available	699	Open in IMG/M
3300029992\|Ga0302276_10421810	Not Available	545	Open in IMG/M
3300029999\|Ga0311339_10410343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1409	Open in IMG/M
3300029999\|Ga0311339_10576829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1125	Open in IMG/M
3300029999\|Ga0311339_11072380	Not Available	748	Open in IMG/M
3300029999\|Ga0311339_11356031	Not Available	641	Open in IMG/M
3300029999\|Ga0311339_11477428	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300030007\|Ga0311338_11253421	Not Available	700	Open in IMG/M
3300030007\|Ga0311338_11372026	Not Available	659	Open in IMG/M
3300030007\|Ga0311338_11441307	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300030053\|Ga0302177_10408738	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300030053\|Ga0302177_10456889	Not Available	663	Open in IMG/M
3300030054\|Ga0302182_10119586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1150	Open in IMG/M
3300030058\|Ga0302179_10378589	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300030399\|Ga0311353_10488181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1094	Open in IMG/M
3300030399\|Ga0311353_11214050	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300030503\|Ga0311370_10425373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1658	Open in IMG/M
3300030503\|Ga0311370_12111571	Not Available	558	Open in IMG/M
3300030524\|Ga0311357_11470378	Not Available	578	Open in IMG/M
3300030617\|Ga0311356_11775429	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300030617\|Ga0311356_12076923	Not Available	501	Open in IMG/M
3300030618\|Ga0311354_10388357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1413	Open in IMG/M
3300030618\|Ga0311354_11837382	Not Available	525	Open in IMG/M
3300030706\|Ga0310039_10025909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2770	Open in IMG/M
3300030739\|Ga0302311_10409959	Not Available	952	Open in IMG/M
3300030741\|Ga0265459_13948871	Not Available	520	Open in IMG/M
3300030760\|Ga0265762_1147363	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300030813\|Ga0265750_1010106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1074	Open in IMG/M
3300030906\|Ga0302314_10928702	Not Available	850	Open in IMG/M
3300031027\|Ga0302308_10059449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2729	Open in IMG/M
3300031027\|Ga0302308_10589814	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031028\|Ga0302180_10554474	Not Available	558	Open in IMG/M
3300031090\|Ga0265760_10239642	Not Available	624	Open in IMG/M
3300031233\|Ga0302307_10195207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1045	Open in IMG/M
3300031234\|Ga0302325_11693917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	800	Open in IMG/M
3300031234\|Ga0302325_12370983	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031234\|Ga0302325_12493101	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031234\|Ga0302325_13388283	Not Available	503	Open in IMG/M
3300031236\|Ga0302324_100213664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3060	Open in IMG/M
3300031524\|Ga0302320_11854017	Not Available	572	Open in IMG/M
3300031525\|Ga0302326_10540228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Embleya → Embleya scabrispora	1753	Open in IMG/M
3300031525\|Ga0302326_11253787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1015	Open in IMG/M
3300031525\|Ga0302326_12039529	Not Available	739	Open in IMG/M
3300031525\|Ga0302326_12521813	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031525\|Ga0302326_12896387	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031708\|Ga0310686_100731477	Not Available	633	Open in IMG/M
3300031708\|Ga0310686_102375383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3392	Open in IMG/M
3300031708\|Ga0310686_103629964	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031708\|Ga0310686_113422553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418	Open in IMG/M
3300032805\|Ga0335078_12485085	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300033829\|Ga0334854_020813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1588	Open in IMG/M
3300034163\|Ga0370515_0007562	All Organisms → cellular organisms → Bacteria	5249	Open in IMG/M
3300034199\|Ga0370514_189737	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.61%
Aquatic	Environmental → Aquatic	15.57%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	49.18%
Soil	Environmental → Terrestrial → Soil	34.43%
Freshwater	Environmental → Aquatic → Freshwater	14.75%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	49.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.66%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	49.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	41.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.28%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.28%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.64%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.64%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1006497172	3300002245	Forest Soil	LRLSGAIGNWPMTIILVVDLALLPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDESPVESADPLATLSNAGGTSGT*
JGIcombinedJ26739_1008149651	3300002245	Forest Soil	IIDLALLPVPAYVTDYLGGTAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGAPDPLATLSGAGGTSGA*
JGIcombinedJ26739_1012700911	3300002245	Forest Soil	RRRWLVTLIVAVVGVAWALRLSGAIGNWPMTIILLVDLALFPVPAYVTDYRRGIAPPAFGLPERRSKEKRDTFFAEAVSDEGPAGSADPVSTLSNAGGTSGA*
Ga0062385_110133392	3300004080	Bog Forest Soil	RLSGAIGNWPMTIIMVVDLALFPVPAYVIDYRARIAPPAFGLPERRSKEKRHAWFPDAVSDESPVASADPLTALSGAGGSSGP*
Ga0062389_1029383901	3300004092	Bog Forest Soil	GAIGNWPMTIIMMVDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFAGAASDDGPVGSADSLAALSGAGGSRGT*
Ga0070765_1001710871	3300006176	Soil	RWLLALMVAVVGAAWGLRLGGAIGNWTMTIILMIDLALFPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFAEAVSDEGPVVSADPLTALSGTGGTSGT*
Ga0070765_1010430382	3300006176	Soil	ILVVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRDAFFADAAADESPDTTGDQLAALSGAGGTSGS*
Ga0116125_12584552	3300009628	Peatland	VYSSVTRRLWLLVLIVGVFGLAWTLRLSGAIGNWPMTIIILVDLMLFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT*
Ga0116217_104793161	3300009700	Peatlands Soil	WALRLGGAIGNWPMTIILVIDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFSEAVSDEGPVGSSDPLAALSGAGGTSGT*
Ga0136449_1026763921	3300010379	Peatlands Soil	LFPVPAYVADYRARIAPPAFGLPERRSKDKRNAWFAEAASDDGPVGAAEALAALSGAGGASGA*
Ga0181538_100316555	3300014162	Bog	VVDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFSEAVSDEGPVGSSDPLAALSGAGGTSGT*
Ga0181532_101322051	3300014164	Bog	RRRWLVALIVVVVGAAWALRLSGAIGNWPMTIILVVDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFSEAVSDEGPVGSSDPLAALSGAGGTSGT*
Ga0181534_104331592	3300014168	Bog	TIVILVALMAFPVPAYVVDYRAGIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGGSGA*
Ga0182018_104847112	3300014489	Palsa	GTIPGSIRPVYLSVARRRWLAALIVAVVGAAWALRLGGVIGNWTMAIVMMADLALLPVPAYVADYRARIAPPAFGLPERRSKEKRDAWFAEAVSDEGPVDPVDPLTLSGSGGTSGA*
Ga0182016_108491971	3300014493	Bog	WALRLGGAIGNWPMTIIILVDLMAFPVPAYVVDYRARIAPPAFGLPERRSKDKRDAFFAEAVSDHEPVGPADPLAALSGAGGTSGT*
Ga0182015_101769473	3300014495	Palsa	AIGNWPMTIIILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT*
Ga0182015_102483781	3300014495	Palsa	SGAIGNWPMTIIMAVDVALFPVPAYVADYRARTAPPAFGLPERRSKEKRDTRISEAQSANEPIGSADLLATLSGTGGTSGT*
Ga0182012_106815992	3300014499	Bog	GTVPGSVRPVYLSVMRRVWLLALIVAVFVLAWGLRLGGVIGNWPMVIILIVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT*
Ga0182024_105071901	3300014501	Permafrost	AWALRLSGAIGNWPMTIILLVDLALVPVPAYVNDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPLATLSSAGGTSGT*
Ga0182024_121371532	3300014501	Permafrost	PAYVADYRARIAPPAFGLPERRSKEKRDAWFASAASDDGPVDSADSLAALSGAGGSSGT*
Ga0182024_124000631	3300014501	Permafrost	AWALRLSGAIGNWPMTIILLVDLALVPVPAYVNDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPLATLSSAGGTSGA*
Ga0182024_128245231	3300014501	Permafrost	MIVDLALLPIPAYVADYRARIAAPAFGLPERRSNEKRDALFAQAVSNEGSVDSTGPLAALSDAGGTGGP*
Ga0181536_102901662	3300014638	Bog	SVVRRRWLLALIVAVFALAWALRLGGAIGNWPMTIIILVDLMLFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAWFAEAVSDEEPVGPADPLAALSGAGGTSGT*
Ga0181525_102197432	3300014654	Bog	RVWLLALIVAVFVLAWGLRLGEVIGNWPMTIIILIDLLLFPVPAYVVDYRAGIAPPAFGLPERRSKAKRNAFFSEAASDEGPVGPADPLAALSGAGGTSGT*
Ga0181525_106116292	3300014654	Bog	LPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT*
Ga0181516_104177942	3300014655	Bog	NGTVPGSVRPVYLSVTRRRWLLALIVGVVALAWALRLGGAIGNWPMTIVILVALMAFPVPAYVVDYRAGIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGGSGA*
Ga0181522_101788881	3300014657	Bog	TPNGTIPGSIRPVYLSVARRRWLVALIVAVVGAAWALRLSGAIGNWTMTIILVVDLALFPVPAYVADYRARIAPPAFGLPERRSKEKRDAWFAKAVSDEEPSGSADPLAALSGAGGSSGA
Ga0187884_104591431	3300018009	Peatland	TADLALLPVPAYIVDYRARIAPPAFGLPERRSKGRRDAWLAKPVTEEPVAPTAPLAAPSRAGGNSGT
Ga0187880_10453861	3300018016	Peatland	RRWLLALIVAVFALAWALRLGGAIGNWPMTIIILVDLMLFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAWFAEAVSDEEPVGPADPLAALSGAGGTSGT
Ga0187883_106041601	3300018037	Peatland	GNWPMTIIILVDLMLFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAWFAEAVSDEEPVGPADPLAALSGAGGTSGA
Ga0187887_101066341	3300018043	Peatland	IILVDLMLFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0187887_103538331	3300018043	Peatland	IRPVYLSVARRRWLVALILAVVGVAWVLRLSGAIGNWPMTIILLIDLALLPVPAYVTDDRRGIAPPAFGLPERRSKEKRDAFFAEAVSDEGHVGSADPLATMSNAGGTSGA
Ga0187859_108662281	3300018047	Peatland	AVFGLAWALRLGGAIGNWPMTIIILVDLMAFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAEAASDQEPVGPADPLAALSGAGGTSGT
Ga0187858_101602333	3300018057	Peatland	ARRRWLLALIVAVVGAAWALRLSGAIGNWTMTIILVVDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFSEAVSDEGPVGSADPLTALSGAGGTSGT
Ga0187772_106766262	3300018085	Tropical Peatland	PNGTIPGSIRPVYLSVARRRWLVAVIVVVVGAAWALRLSGAIGGWTMTIIMLVDLALFPVPAYVADYRARIAPPAFGLPERRSKEKRDAWFAEAAADEAPVTTADSLAALSGAGGTSGA
Ga0210396_117446702	3300021180	Soil	PVWLSVVRRRWLLAGIVAVFGAAWALRLGGAIGNWTMTVILVVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRDAFFADAAADESPVTTDDQLAALSGAGGTSGS
Ga0210388_116906012	3300021181	Soil	AYITDYRGGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0210393_116960952	3300021401	Soil	VAAAWALRLSGAIGNWPMTIILVVDLALLPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDESPVESADPLATLSNAGGTSGT
Ga0210398_108752522	3300021477	Soil	AAWALRLSGAIGNWTMAIIMVVDLALLPIPVYVADYRARIAPPAFGLPERRSKEKRDAWFADAVSDEGPVGAADALGALSGAGGTSGA
Ga0210409_112646641	3300021559	Soil	YVADYRAKIAPPAFGLPERRSKEKRDAFFADAAADESPDTTGDQLAALSGAGGTSGS
Ga0224549_10242952	3300022840	Soil	ILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT
Ga0224572_10319791	3300024225	Rhizosphere	RRRWLVALIVAVVGAAWALRLSGAIGNWPMTIILLVDLALLPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDDGPAGSADPLATLSNAGGTSGS
Ga0209010_10693082	3300027370	Forest Soil	RLSGAIGNWPMTIILLVDLGLLPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFADAVSDENPVGSAADPLATLSNAGGTSGA
Ga0209525_11626412	3300027575	Forest Soil	PNGTIPGSIRPVYLSVARRRWLVALIVAVVGAAWALRLSGAIGNWPMTIILLVDLGLLPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFADAVSDENPVGSAADPLATLSNAGGTSGA
Ga0208324_11415021	3300027604	Peatlands Soil	LVALIVAVVGAAWALRLSGAIGNWTMTIIMVIDLALFPVPAYVADYRARIAPPAFGLPERRSKEKRDAWFAEAVSDEGPVGSADPLAAMSGAGGTSGA
Ga0209420_11515261	3300027648	Forest Soil	SVARRRWLLGLIVAVVGAAWALRLSGAIGNWPMTIIMVVDLALFPVPAYVADYWARIAPPAFGLPERRSKEKRDAWFAEAVSDEGPVGSADPLASLSGAGGTSGA
Ga0209007_11620521	3300027652	Forest Soil	LSGAIGNWPMTIILLIDLALLPVPAYVTDYLGGTAPPAFGLPERRSKEKRDAWFAKAASDEDPVSSADPLTALSGAGGTSGA
Ga0209626_11495492	3300027684	Forest Soil	LMVAVLGVAWALRLGGAIGNWTMAIILAVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFAEAVSDEGPVVSADPLTALSGTGGTSGT
Ga0209169_104410202	3300027879	Soil	LIIDLALLPVPAYVTDYLGGTAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0209275_102929212	3300027884	Soil	TMAIILAVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFAEAVSDEGPVVSADPLTALSGTGGTSGT
Ga0209069_110436942	3300027915	Watersheds	VVARRRWLLALIVAVVGAAWALRLGGAIGNWPMTIILVVDLALFPVPAYVADYRARIAPPAFGLPERRSKEERDAWFSEAVSDEGSVGAADPITALSGAGGT
Ga0302202_104638701	3300028762	Bog	AWALRLGGVIGNWPMVIILIVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT
Ga0302234_104632661	3300028773	Palsa	IVMMADLALLPVPAYVADYRARIAPPAFGLPERRSKEKRDAWVAETVSDEGPVGPADLLTALSSAGDTSGA
Ga0302225_100592931	3300028780	Palsa	IGNWPMTIIILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT
Ga0302225_105548641	3300028780	Palsa	WPMTIIMLVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0302223_103176301	3300028781	Palsa	ILLVDLALLPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPLATLSNAGGTSGA
Ga0302232_106117472	3300028789	Palsa	ARRLPLAASMVAVIGLAWALRLSGAIGNWPMTIIMAVDVALFPVPAYVADYRARTAPPAFGLPERRSKEKRDTRISEAQSANEPIGSADLLATLSGTGGTSGT
Ga0302221_100781031	3300028806	Palsa	FPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302157_102540211	3300028813	Bog	FVLAWGLRLGGVIGNWPMTIIILIDLLLFPVPAYVVDYRAGIAPPAFGLPERRSKAKRNAFFSEAASDEGPVGPADPLAALSGAGGTSGT
Ga0302218_103085002	3300028863	Palsa	LALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302229_103174421	3300028879	Palsa	VVALAWALRLGGAIGNWPMTIIMLVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0302229_103316391	3300028879	Palsa	LPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDEGHVGSADPLATMSNAGGTSGA
Ga0311329_108272031	3300029907	Bog	FVLAWGLRLGGVIGNWPMTIIILIDLLLFPVPAYVVDYRAGIAPPAFGLPERRSKDKRDAFFAEAVSDHEPVGPADPLAALSGAGGTSGT
Ga0311369_106357141	3300029910	Palsa	VPAYVADYRAGIAPPAFGLPERRSKKKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0311361_113279502	3300029911	Bog	MVIILIVALALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT
Ga0311362_108815981	3300029913	Bog	GAAWALRLGGVIGNWPMVIILIVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT
Ga0311352_101587221	3300029944	Palsa	LVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT
Ga0311352_107354291	3300029944	Palsa	YVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0311371_113870361	3300029951	Palsa	AWALRLGGAFGNWPMTIIILVDLMLFPVPAYVIDYRARIAPPAFGLPERRSKERRNAFFDEAAAGEDPISSADPLALSGAGGASGT
Ga0311371_116641992	3300029951	Palsa	LVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0302276_104218101	3300029992	Bog	RWLVALIVAVAGAAWALRLGGVIGNWPMVIILIVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFGAAVSDEGPVGPADRVTELSTAGDTSGT
Ga0311339_104103433	3300029999	Palsa	FPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0311339_105768293	3300029999	Palsa	VAVFGVAWALRLSGAIGNWPMTIIMLADLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWLSEAVSDEAPEGSVDPLAALSGTGGASGT
Ga0311339_110723801	3300029999	Palsa	GNWPMTIIMLVDLALLPVPAYVADYWARIAPPAFGLPERRSKEKRNAWFAEAASDQGPVASVDPLSALSGTGRSGGT
Ga0311339_113560312	3300029999	Palsa	MTIILLVDLALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEDPVGSADPVATLSNAGGTSGA
Ga0311339_114774281	3300029999	Palsa	RRWLLALIVVVFAGAWALRLGGAFGNWPMTIIILVDLMLFPVPAYVIDYRARIAPPAFGLPERRSKERRNAFFDEAAAGEDPISSADPLALSGAGGASGT
Ga0311338_112534212	3300030007	Palsa	AAWALRLGGVIGNWTMAIVMMADLALLPIPAYVADYRAGIAPPAFGLPERRSKEKRDTWFAEAVSDESPIGPANPLTLSPAGDSSGA
Ga0311338_113720261	3300030007	Palsa	MTIILLVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAFFTEAVSDEGPVGSADPLATLSNAGGTSGA
Ga0311338_114413071	3300030007	Palsa	NWPMTIIMLVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRDAWFAEAASDEGPAGSADPLAALSGAGGTSGT
Ga0302177_104087381	3300030053	Palsa	VVRHRWLAALIVVVVGAAWALRLGGVIGNWTMAIVMMADLALLPIPAYVADYRAGIAPPAFGLPERRSKEKRDTWFAEAVSDESPIGPANPLTLSPAGDSSGA
Ga0302177_104568892	3300030053	Palsa	IGNWPMTIILVVDLALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302182_101195861	3300030054	Palsa	GGAIGNWPMTIIILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFADAVSDEGPAGSADPLAALSGAGGTSGT
Ga0302179_103785892	3300030058	Palsa	WPMTIILLVDLLALPVPAYVVDYRANVAPPAFGLPERRSKEKRDEWFAQAVPGTGPVATGDQVPTLSGAGGASGT
Ga0311353_104881813	3300030399	Palsa	MTIIMAVDLALFPVPAYVADYRARTAPPAFGLPERRSKEKRDTRISEAQSANEPIGSADLLATLSGTGGTSGT
Ga0311353_112140502	3300030399	Palsa	ALAWALRLGGAIGNWPMTIIMLVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0311370_104253733	3300030503	Palsa	SVVRRRWLLALILVVVGGAWVLRLSGAIGNWPMTIILLVDLALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEDPVGSADPVATLSNAGGTSGA
Ga0311370_121115711	3300030503	Palsa	PVPAYVIDYRAGIAPPAFGLPERRSKERRNAFFDEAASGEDPLTSDDPFALSGAGGTSGT
Ga0311357_114703782	3300030524	Palsa	ILTVVIVAWVLRLAGAISDWPMTIILLVDLLALPVPAYVVDYRANVAPPAFGLPERRSKEKRDEWFAQAVPGTGPVATGDQVPTLSGAGGASGT
Ga0311356_117754292	3300030617	Palsa	DLILFPAPAYIFDYRARIAPPAFGLPERRSKEKREAFFAEAVSDDEAVDSADPLGALSGAGGPGGT
Ga0311356_120769232	3300030617	Palsa	VVIAAWALRLAGAFGNWPMTIILLVDLFVLPVPAYVVDYRANVAPPAFGLPERRSKERRDAWFIQPVPGTGPTATGDQVPTLSGAGGASGT
Ga0311354_103883571	3300030618	Palsa	AFGNWPMTIIILVDLMLFPVPAYVIDYRARIAPPAFGLPERRSKERRNAFFAEAVSDEEPVVSADPLGALSGAGGTSAT
Ga0311354_118373822	3300030618	Palsa	ALRLAGAFGNWPMTIILLVDLFVLPVPAYVVDYRANVAPPAFGLPERRSKERRDAWFIQPVPGTGPTATGDQVPTLSGAGGASGT
Ga0310039_100259095	3300030706	Peatlands Soil	VVGAAWALRLGGAIGNWTMTIILLVDLALFPVPAYVADYRARIAPPAFGLPERRSKDKRDAWFAEAVSDDGPVGTADALAALSGAGGTSGA
Ga0302311_104099592	3300030739	Palsa	VARRLPLAASMVAVIGLAWALRLSGAIGNWPMTIIMAVDVALFPVPAYVADYRARTAPPAFGLPERRSKEKRDTRISEAQSANEPIGSADLLATLSGTGCTSGT
Ga0265459_139488711	3300030741	Soil	GNWPMTIIILVDLMAFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPAGEVAALSGAGGTSGA
Ga0265762_11473632	3300030760	Soil	FALAWALRLGGAIGNWPMTIIILVDLMAFPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0265750_10101062	3300030813	Soil	VAVVGVAWGLRLSGAIGNWPMTIILLIDLALLPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302314_109287022	3300030906	Palsa	NWPMTIILLVDLALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302308_100594495	3300031027	Palsa	AWVLRLSGAIGNWPMTIILVVDLALFPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPHATLSNAGGTSGA
Ga0302308_105898141	3300031027	Palsa	RPVYLSVLRRRWLLALIVVVFAGAWALRLGGAFGNWPMTIIILVDLMLFPVPAYVIDYRARIAPPAFGLPERRSKERRNAFFAEAVSDEEPVVSADPLALSGAGGASGT
Ga0302180_105544742	3300031028	Palsa	LSVVRRRWLLALILAVVGGAWVLRLGGVIDNWPMTIIMVVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDARFYEEAYDDEPVGSADPLTALSRTGGTSGP
Ga0265760_102396421	3300031090	Soil	AVDLALLPVPAYVADYRARIAPPAFGLPERRSKEKRNAWFAEAVSDEGPVVSADPLTALSGTGGTSGT
Ga0302307_101952073	3300031233	Palsa	LLRLSGAIGNWPMTIILVVDLALFPVPAYVADYRAGIAPPAFGLPERRSKAKRDAFFAEAVSDEGPVGSADPVATLSNAGGTSGA
Ga0302325_116939171	3300031234	Palsa	WALRLGGAFGNWPMTIIILVDLMLFPVPAYVADYRARIAPPAFGLPDRRSKGQRNAWLSEAVADEGPGELDDPLALSGAGGTSGT
Ga0302325_123709831	3300031234	Palsa	RRRWLLALILVVVGGAWVLRLSGAIGNWPMTIILVVDLALFPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPLATLSNAGGTSGA
Ga0302325_124931012	3300031234	Palsa	PMTIILLVDLALLPVPAYVTDYRRGIAPPAFGLPERRSKEKRDAFFAEAVSDESPVESADPLATLSNAGGTSGA
Ga0302325_133882831	3300031234	Palsa	DLMLLPVPAYVVDYRARIAPPAFGLPERRSKEKRDAFFAAAVSDEGPVGSTDPLAALSGAGGTSGT
Ga0302324_1002136645	3300031236	Palsa	RPVYLSVTRRRWLLALIVGVVALAWALRLGGAIGNWPMTIIMLVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0302320_118540171	3300031524	Bog	IDLLLFPVPAYVVDYRAGIAPPAFGLPERRSKAKRNAFFSEAASDEGPVGPADPLAALSGAGGTSGT
Ga0302326_105402281	3300031525	Palsa	AGAIGNWPMTVILLVDLLALPVPAYVVDYRANVAPPAFGLPERRSKERRDDWFAQAVPGPGPVAPGDQVPTLSGAGGASGT
Ga0302326_112537872	3300031525	Palsa	SIRPIYLSVVRRRWLLALMVAVVGVAWALRLGGAIGNWPMAIIMMIDLALLPAPFYVADYRARNAPPAFGLPERRSKDKRDAGFATAESDGRPEGSGDPLAALSGAGGTSGT
Ga0302326_120395291	3300031525	Palsa	LALIVGVFGLAWALRLGGAIGNWPMTIIILVDLMLFPVPAYVVDYRGRIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT
Ga0302326_125218131	3300031525	Palsa	LLALILVVVGGAWVLRLSGAIGNWPMTIILVVDLALFPVPAYVTDYRGGIAPPAFGLPERRSKEKRDAFFAEAVSDEGPVGSADPLATLSNAGGTSGA
Ga0302326_128963871	3300031525	Palsa	VVFAGAWALRLGGAFGNWPMTIIILVDLMLFPVPAYVIDYRARIAPPAFGLPERRSKERRNAFFDEAAAGEDPISSADPLALSGAGGASGT
Ga0310686_1007314771	3300031708	Soil	LGGAIGNWPMTIIILVDLMLFPVPAYVADYRAKIAPPAFGLPERRSKERRDASFSAAVSDNEPVGSADPLGALSGAGGTSGT
Ga0310686_1023753831	3300031708	Soil	NWPMTIIMVVALALFPVPAYVVDYRKGIAPPAFGLPERRSKEKRDAWFADAASDEAPVESADPIATLSGAGGTSGP
Ga0310686_1036299642	3300031708	Soil	FAAAWALRLSGAIGNWPMTIIMVVDLALVPVPAYVADYRARIAPPAFGLPERRSKAKQGASFAEVVSDQAPVGPADPMATLSEAGGTHGT
Ga0310686_1134225533	3300031708	Soil	LILFPAPAYIFDYRARMAPPAFGLPERRSKEKREAFFAEAVSDDEAVASADPLGALSGAGGPGGT
Ga0335078_124850852	3300032805	Soil	YLSVARRRWLVAVIVAVVGIAWALRLSGAIGGWAMTIIMVVDLALLPVPAYVADYRAGIAPPAFGLPERRSKERRDAWFAEAAADEGPVATADPLAALSGAGGTSGT
Ga0334854_020813_75_296	3300033829	Soil	MTIIILVDLALFPVPAYVADYRAGIAPPAFGLPERRSKEKRDAWFAEAVSDEGPAGSADPLAALSGAGGTSGT
Ga0370515_0007562_4879_5193	3300034163	Untreated Peat Soil	VARRRWLLAPIVAVVGAAWALRLSGVIGNWPMAIIMMVDLALVPVPAYVADYRSRIAPPAFGLPERRSKEKRDAWFAEAVSDEGPVGPADQLTALSGAGGTSGT
Ga0370514_189737_260_481	3300034199	Untreated Peat Soil	MTIIMLVALMAFPVPAYVIDYRARIAPPAFGLPERRSKEKRDAFFAEAVSDQEPVGPADPLAALSGAGGTSGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071451

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences