Metagenome / Metatranscriptome Family F071298

Overview

Basic Information

• Family ID: F071298
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 122
• Average Sequence Length: 41 residues
• Representative Sequence: IAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
• Number of Associated Samples: 108
• Number of Associated Scaffolds: 122

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 1.64 %
• % of genes near scaffold ends (potentially truncated): 99.18 %
• % of genes from short scaffolds (< 2000 bps): 93.44 %
• Associated GOLD sequencing projects: 104
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (97.541 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.393 % of family members)
• Environment Ontology (ENVO): Unclassified (26.230 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (53.279 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 44.12%
  β-sheet: 0.00%
  Coil/Unstructured: 55.88%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03446	NAD_binding_2	68.85
PF14833	NAD_binding_11	20.49
PF03301	Trp_dioxygenase	3.28
PF13417	GST_N_3	1.64
PF05145	AbrB	1.64
PF08241	Methyltransf_11	0.82
PF00043	GST_C	0.82
PF02894	GFO_IDH_MocA_C	0.82
PF14237	GYF_2	0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	3.28
COG3180	Uncharacterized membrane protein AbrB, regulator of aidB expression	General function prediction only [R]	1.64
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.82
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.82

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.54 %
Unclassified	root	N/A	2.46 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.54 %
Unclassified	root	N/A	2.46 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.54 %
Unclassified	root	N/A	2.46 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.16 %
Unclassified	root	N/A	2.46 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.34 %
Unclassified	root	N/A	2.46 %

Level 6

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	63.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.28 %
Unclassified	root	N/A	2.46 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	63.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.28 %
Unclassified	root	N/A	2.46 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000597|AF_2010_repII_A1DRAFT_10018862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1895
3300001686|C688J18823_10088394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2151
3300004479|Ga0062595_100817281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771
3300005334|Ga0068869_101231733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658
3300005363|Ga0008090_10206893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659
3300005543|Ga0070672_100762585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850
3300005546|Ga0070696_101388733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598
3300005548|Ga0070665_100489875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1240
3300005558|Ga0066698_10974858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539
3300005559|Ga0066700_10034316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2999
3300005574|Ga0066694_10100772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1350
3300005574|Ga0066694_10284070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787
3300005577|Ga0068857_100239476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1661
3300005764|Ga0066903_106631087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602
3300005764|Ga0066903_107558040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560
3300005937|Ga0081455_10707824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641
3300006034|Ga0066656_10454440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834
3300006048|Ga0075363_100887042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545
3300006353|Ga0075370_10391197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833
3300006575|Ga0074053_10008821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790
3300006575|Ga0074053_12004822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921
3300006579|Ga0074054_11921062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261
3300006852|Ga0075433_11452778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593
3300006854|Ga0075425_100446050	Not Available	1490
3300006871|Ga0075434_100486036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256
3300009088|Ga0099830_10043302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3135
3300010043|Ga0126380_10762682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786
3300010043|Ga0126380_10778935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780
3300010046|Ga0126384_12492569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502
3300010047|Ga0126382_10576495	All Organisms → cellular organisms → Bacteria	921
3300010047|Ga0126382_11428117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633
3300010047|Ga0126382_11810067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574
3300010048|Ga0126373_13170145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512
3300010337|Ga0134062_10086895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326
3300010362|Ga0126377_12532090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589
3300010362|Ga0126377_13502591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507
3300010366|Ga0126379_13286491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541
3300010375|Ga0105239_13655581	All Organisms → cellular organisms → Bacteria	500
3300010397|Ga0134124_12942462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520
3300010398|Ga0126383_10824770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011
3300010868|Ga0124844_1036359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1625
3300012021|Ga0120192_10019577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056
3300012022|Ga0120191_10039925	Not Available	773
3300012096|Ga0137389_10727126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853
3300012202|Ga0137363_10785204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808
3300012204|Ga0137374_10058694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3885
3300012208|Ga0137376_10754768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838
3300012211|Ga0137377_11059002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741
3300012355|Ga0137369_10381747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021
3300012360|Ga0137375_11087223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622
3300012362|Ga0137361_11755598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539
3300012910|Ga0157308_10198414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676
3300012916|Ga0157310_10169031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771
3300012929|Ga0137404_11657304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594
3300012930|Ga0137407_10363401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1335
3300012951|Ga0164300_10715855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609
3300015374|Ga0132255_105138074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554
3300016270|Ga0182036_11361254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593
3300016341|Ga0182035_10574850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971
3300016357|Ga0182032_11232529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644
3300016404|Ga0182037_12087818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509
3300016422|Ga0182039_10437654	All Organisms → cellular organisms → Bacteria	1118
3300018027|Ga0184605_10382417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632
3300018074|Ga0184640_10229303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842
3300018081|Ga0184625_10129444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1314
3300018089|Ga0187774_10844065	All Organisms → cellular organisms → Bacteria	623
3300018476|Ga0190274_13704017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517
3300019356|Ga0173481_10041465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1538
3300019873|Ga0193700_1020592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090
3300021406|Ga0210386_10253728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1501
3300021432|Ga0210384_11033378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724
3300021439|Ga0213879_10067278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970
3300021560|Ga0126371_11011015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973
3300025914|Ga0207671_10593534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883
3300025915|Ga0207693_10013032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6709
3300025916|Ga0207663_11226208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604
3300026547|Ga0209156_10273095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773
3300027521|Ga0209524_1001542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3924
3300027521|Ga0209524_1021660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1329
3300027824|Ga0209040_10130459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381
3300027846|Ga0209180_10166970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1269
3300027884|Ga0209275_10616244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623
3300027894|Ga0209068_10823073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547
3300027907|Ga0207428_10108229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2141
3300028715|Ga0307313_10036206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1410
3300028720|Ga0307317_10091148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005
3300028755|Ga0307316_10092312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050
3300028755|Ga0307316_10175026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769
3300028782|Ga0307306_10203545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567
3300028811|Ga0307292_10127203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018
3300028824|Ga0307310_10322204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756
3300028885|Ga0307304_10542283	All Organisms → cellular organisms → Bacteria	535
3300031446|Ga0170820_12572319	All Organisms → cellular organisms → Bacteria	889
3300031572|Ga0318515_10115082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1418
3300031640|Ga0318555_10267774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923
3300031719|Ga0306917_10495098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959
3300031744|Ga0306918_10544230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909
3300031770|Ga0318521_10169416	All Organisms → cellular organisms → Bacteria	1248
3300031771|Ga0318546_10842437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645
3300031779|Ga0318566_10140812	Not Available	1194
3300031780|Ga0318508_1179151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605
3300031781|Ga0318547_10237072	All Organisms → cellular organisms → Bacteria	1097
3300031792|Ga0318529_10162442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030
3300031880|Ga0318544_10307285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615
3300031902|Ga0302322_103109345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570
3300031912|Ga0306921_11893134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638
3300031947|Ga0310909_10315669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310
3300031947|Ga0310909_11447926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548
3300032009|Ga0318563_10454635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692
3300032010|Ga0318569_10578237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523
3300032060|Ga0318505_10375981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671
3300032064|Ga0318510_10137891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955
3300032066|Ga0318514_10320989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819
3300032076|Ga0306924_10121532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2971
3300032076|Ga0306924_10525460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345
3300032076|Ga0306924_10555076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303
3300032076|Ga0306924_12404201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531
3300032076|Ga0306924_12511655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516
3300032089|Ga0318525_10304015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819
3300032094|Ga0318540_10125918	All Organisms → cellular organisms → Bacteria	1218
3300032174|Ga0307470_10169517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1359
3300032261|Ga0306920_101831759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.52%
Host-Associated	Host-Associated	11.48%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.43%
Plants	Host-Associated → Plants	11.48%
Aquatic	Environmental → Aquatic	4.10%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.56%
Sediment	Environmental → Aquatic → Sediment	3.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Roots	Host-Associated → Plants → Roots	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Peat	Environmental → Terrestrial → Peat	0.82%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.59%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.82%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100188621	3300000597	Forest Soil	DSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGTPPDPSSS*
C688J18823_100883941	3300001686	Soil	TMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPPNDKRA*
Ga0062595_1008172812	3300004479	Soil	TLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ*
Ga0068869_1012317332	3300005334	Miscanthus Rhizosphere	MIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGLPSDDKRA*
Ga0008090_102068931	3300005363	Tropical Rainforest Soil	LIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0070672_1007625851	3300005543	Miscanthus Rhizosphere	DSTMIAGFQLMRILIVLVWCRTALFMFRRVAEWTFGLPPDDEPA*
Ga0070696_1013887332	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LIAGFQLMRIIIVLIWCRTALVLFRWLADWAFGKPPITSCSPD*
Ga0070665_1004898752	3300005548	Switchgrass Rhizosphere	IAGFQLMRILIVLVWCRTALVLFRRVAEWTFGLPSDDKRA*
Ga0066698_109748581	3300005558	Soil	GFQLMRIIIVLIWCRTALVLFQRVADWAFGKPPDARL*
Ga0066700_100343164	3300005559	Soil	LDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ*
Ga0066694_101007722	3300005574	Soil	LGLDATLIAGFQLMRIIIVLIWCRTALVLFQRVADWAFGKPPDARL*
Ga0066694_102840702	3300005574	Soil	FQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ*
Ga0068857_1002394763	3300005577	Corn Rhizosphere	MIAGFQLMRILIVLVWCRTALVLFRRVAEWAFGPPPDDTRA*
Ga0066903_1066310871	3300005764	Tropical Forest Soil	STLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPE*
Ga0066903_1075580401	3300005764	Tropical Forest Soil	TLIAGFQLMRIIIVLIWCRTALVLFQRTAERVFGKPPEPPSS*
Ga0081455_107078242	3300005937	Tabebuia Heterophylla Rhizosphere	QLMRIIIVLIWCRTALALFRRVADWIYGKPVEPPSC*
Ga0066656_104544402	3300006034	Soil	FQLMRIIIVLIWCRTALVLFQRATERVFGKPPSQ*
Ga0075363_1008870421	3300006048	Populus Endosphere	LDSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWAFGPPPDDTRA*
Ga0075370_103911971	3300006353	Populus Endosphere	MIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPSDEKRA*
Ga0074053_100088211	3300006575	Soil	GLDSTMIAGFQLMRILIVLVWCRTALVVFRRVAEWTFGLPPDDKRA*
Ga0074053_120048221	3300006575	Soil	LMRILIVLVWCRTALVLFRRVAEWTFGLPSDDKRA*
Ga0074054_119210621	3300006579	Soil	IAGFQLMRILIVLVWCRTALVVSRRVAEWTFGLPPDDKRA*
Ga0075433_114527781	3300006852	Populus Rhizosphere	FQLMRIIIVLIWCRTALVLFHRVADWAFGKPPITNCSPD*
Ga0075425_1004460503	3300006854	Populus Rhizosphere	TLIAGFQLMRIIIVLIWCRTALVLFHRVADWAFGKPPITNCSPD*
Ga0075434_1004860361	3300006871	Populus Rhizosphere	FQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0099830_100433024	3300009088	Vadose Zone Soil	IAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ*
Ga0126380_107626822	3300010043	Tropical Forest Soil	GFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPDPSSS*
Ga0126380_107789351	3300010043	Tropical Forest Soil	FQLMRIIIVLIWCRTALVLFHRVADWVFGKPPGTSCSPD*
Ga0126384_124925691	3300010046	Tropical Forest Soil	GFQLMRIVIVLIWCRTALVLFNWAADRTFGKPPRP*
Ga0126382_105764952	3300010047	Tropical Forest Soil	IAGFQLMRIIIVLIWCRTALVLFRRVAEWTFGKPADTG*
Ga0126382_114281172	3300010047	Tropical Forest Soil	GLDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0126382_118100671	3300010047	Tropical Forest Soil	TMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGTPPDPSSS*
Ga0126373_131701452	3300010048	Tropical Forest Soil	GFQLMRIIIVLIWCRTALVLFQRTAERVFGKPPEPPSS*
Ga0134062_100868952	3300010337	Grasslands Soil	FQLMRIIIVLIWCRTALVLFQRVADWAFGKPPDAGL*
Ga0126377_125320901	3300010362	Tropical Forest Soil	AGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDPPSS*
Ga0126377_135025911	3300010362	Tropical Forest Soil	MIAGFQLMRIIIVLIWCRTALVLFRRVAEWTFGKPADPGEHSAAS*
Ga0126379_132864912	3300010366	Tropical Forest Soil	STMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0105239_136555812	3300010375	Corn Rhizosphere	STMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGTAPDKRA*
Ga0134124_129424622	3300010397	Terrestrial Soil	LGLDSTMIAGFQLMRILIVLVWCRTALFMFRRVAEWTFGLPPDDEPA*
Ga0126383_108247702	3300010398	Tropical Forest Soil	MRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0124844_10363591	3300010868	Tropical Forest Soil	DSTMIAGFQLMRIIIVLIWCRTALILFKQVADWTYGKPPDSA*
Ga0120192_100195771	3300012021	Terrestrial	GFQLMRIIIVLIWCRTALVLFRHVAECTYGKEDPPSS*
Ga0120191_100399251	3300012022	Terrestrial	GFQLMRIIIVLIWCRTALILFKQVADWTYGKPPHSASP*
Ga0137389_107271262	3300012096	Vadose Zone Soil	GLDSTMIAGFQLMRIIIVLIWCRTALILFERVADWTFGKAPDSE*
Ga0137363_107852041	3300012202	Vadose Zone Soil	TMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPRDAE*
Ga0137374_100586941	3300012204	Vadose Zone Soil	LDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPDPPSS*
Ga0137376_107547682	3300012208	Vadose Zone Soil	LGLDSTLIAGFQLMRFIIVLIWCRTALVLFQRAAERVFGKPPSQ*
Ga0137377_110590021	3300012211	Vadose Zone Soil	TLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0137369_103817472	3300012355	Vadose Zone Soil	GLDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPDPPSS*
Ga0137375_110872231	3300012360	Vadose Zone Soil	QLMRIIIVLIWCRTALVLFQRAAERVFGKPPDPPSS*
Ga0137361_117555982	3300012362	Vadose Zone Soil	IAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS*
Ga0157308_101984142	3300012910	Soil	STMIAGFQLMRILIVLVWCRTALFMFRRVAEWTFGLPPDDEPA*
Ga0157310_101690311	3300012916	Soil	GFQLMRILIVLVWCRTALFMFRRVAEWTFGLPPDDEPA*
Ga0137404_116573042	3300012929	Vadose Zone Soil	MIAGFQLMRILIVLVWCRTALILFKRVADWTFGKPLDPPHP*
Ga0137407_103634012	3300012930	Vadose Zone Soil	STLIAGFQLMRIIIVLIWCRTALVLFQRATERVFGKPPSQ*
Ga0164300_107158551	3300012951	Soil	LDATLIAGFQLMRIIIVLIWCRTALVLFHRVADWAFGKPLL*
Ga0132255_1051380741	3300015374	Arabidopsis Rhizosphere	STMIAGFQLMRIIIVLIWCRTALILFKQVADWIYGKALDPPGDDSWPMIHGP*
Ga0182036_113612542	3300016270	Soil	AGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ
Ga0182035_105748502	3300016341	Soil	GLDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAEHVFGKPPEPPSS
Ga0182032_112325292	3300016357	Soil	FQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0182037_120878182	3300016404	Soil	LDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0182039_104376541	3300016422	Soil	GLDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0184605_103824171	3300018027	Groundwater Sediment	IAGFQLMRILIVLVWCRTALFLFRRVAEWTFGLPPDDKRA
Ga0184640_102293031	3300018074	Groundwater Sediment	MIAGFQLMRILIVLVWCRTALFLFRRVAEWTFGLPPDDKR
Ga0184625_101294442	3300018081	Groundwater Sediment	IAGFQLMRIVIVLVWTRTALVLFRRVADEIYGKPEDHA
Ga0187774_108440652	3300018089	Tropical Peatland	QLTRIIIVLIWCRTALVLFDRLADWTYGKRPPSKDRP
Ga0190274_137040171	3300018476	Soil	QLMRILIVLVWCRTALVLFRRVAEWTFGPPDDTRA
Ga0173481_100414651	3300019356	Soil	LMRILIVLVWCRTALVLFRRVAEWTFGPPPDDTRV
Ga0193700_10205921	3300019873	Soil	MIAGFQLMRILIVLVWCRTALFLFRRVAEWTFGLPPDDKRA
Ga0210386_102537283	3300021406	Soil	DSTVIAGFQLARIIIVLIWSRTALQLFGPLADWACGKKDAKT
Ga0210384_110333782	3300021432	Soil	LMRIIIVLIWCRTALVLFRWLADWAFGKPPITNCSPD
Ga0213879_100672782	3300021439	Bulk Soil	LGLDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPNGSL
Ga0126371_110110152	3300021560	Tropical Forest Soil	DSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPAEPPSS
Ga0207671_105935341	3300025914	Corn Rhizosphere	DSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGLPSDDKRA
Ga0207693_100130321	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IAGFQLARIIIVLIWSRTALQLFGPLADWALGKPPPQINTRSE
Ga0207663_112262082	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TLIAGFQLMRIIIVLIWCRTALVLFHRVADWAFGKPPITNCSPD
Ga0209156_102730951	3300026547	Soil	LDATLIAGFQLMRIIIVLIWCRTALVLFQRVADWAFGKPPDARL
Ga0209524_10015425	3300027521	Forest Soil	IAGFQLARIIIVLIWSRTALQLFGPLADWACGKKDAKT
Ga0209524_10216601	3300027521	Forest Soil	IAGFQLARIIIVLIWSRTALQLFGPLADWACGKPPRQINTSTE
Ga0209040_101304591	3300027824	Bog Forest Soil	GLDSTVIAGFQLMRVIVVLIWCRTALQLFGTLADWTVGKRS
Ga0209180_101669702	3300027846	Vadose Zone Soil	LDSTMIAGFQLMRIIIVLIWCRTALILFERVADWTFGKAPDSE
Ga0209275_106162442	3300027884	Soil	KVLGLDATVIAGFQLARIIIVLIWSRTALQLFGPLADWALGKKDAKT
Ga0209068_108230731	3300027894	Watersheds	LDATVITGFQLTRIIIVLIWCRTALILFERLADWTFGKK
Ga0207428_101082291	3300027907	Populus Rhizosphere	IAGFQLMRILIVLVWCRTALFMFRRVAEWTFGLPPDDEPA
Ga0307313_100362061	3300028715	Soil	GFQLMRILIVLVWCRTALFLFRRVAEWTFGLPPDDKRA
Ga0307317_100911482	3300028720	Soil	GFQLMRILIVLVWCRTALVLFRRVAEWTFGPPPNDKRA
Ga0307316_100923122	3300028755	Soil	VLGLDSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPPNDKRA
Ga0307316_101750261	3300028755	Soil	MIAGFQLMRILIVLVWCRTALVVFRRVAEWTFGLPPDDKQA
Ga0307306_102035451	3300028782	Soil	GLDSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPSDEKRV
Ga0307292_101272031	3300028811	Soil	VLGLDSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPSDEKRV
Ga0307310_103222042	3300028824	Soil	GLDSTTIAGFQLMRIIIVLIWCRTALILFKRVADWVYGKPADS
Ga0307304_105422832	3300028885	Soil	GLDSTMIAGFQLMRILIVLVWCRTALVLFRRVAEWTFGPPPNDKRA
Ga0170820_125723192	3300031446	Forest Soil	GLDSTMIAGFQLMRILIVLVWCRTALVVFRRVAEWTFGLPPDDKRA
Ga0318515_101150823	3300031572	Soil	TLIAGFQLMRIVIVLIWCRTALVLFNWAADRTFGKPPRP
Ga0318555_102677741	3300031640	Soil	GLDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDG
Ga0306917_104950982	3300031719	Soil	DSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERAFGKPPEPPSS
Ga0306918_105442302	3300031744	Soil	TLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0318521_101694161	3300031770	Soil	GFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0318546_108424372	3300031771	Soil	FQLMRVIIVLIWCRTALVLFQRAAERVFGKPPDPPSS
Ga0318566_101408122	3300031779	Soil	LDATLIAGFQLMRIVIVLIWCRTALVLFNWAADRTFGKPPRP
Ga0318508_11791511	3300031780	Soil	LGLDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0318547_102370721	3300031781	Soil	STMIAGFQLMRIIIVLIWCRTALVLFQRAAERAFGKPPEPPSS
Ga0318529_101624422	3300031792	Soil	GFQLMRIIIVLIWCRTALVLFQRAAERAFGKPPEPPSS
Ga0318544_103072852	3300031880	Soil	LIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0302322_1031093451	3300031902	Fen	AAVITGFQLTRIIVVLIWCRTALIFFNWLADRAFGPAPGPQ
Ga0306921_118931341	3300031912	Soil	LDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDPSSS
Ga0310909_103156692	3300031947	Soil	MIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDG
Ga0310909_114479262	3300031947	Soil	LIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ
Ga0318563_104546352	3300032009	Soil	STMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDG
Ga0318569_105782372	3300032010	Soil	DSTMIAGFQLMRIIIVLIWCRTALVLFQRAAEHVFGKPPDQ
Ga0318505_103759811	3300032060	Soil	TMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKTPEG
Ga0318510_101378911	3300032064	Soil	AGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDPSSS
Ga0318514_103209892	3300032066	Soil	FQLMRIIIVLIWCRTALVLFQRAAEHVFGKPPEPPSS
Ga0306924_101215321	3300032076	Soil	GLDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPSQ
Ga0306924_105254601	3300032076	Soil	GFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDPSSS
Ga0306924_105550762	3300032076	Soil	AGFQLMRIIIVLIWCRTALVLFQRAAEHVFGKPPEPPSS
Ga0306924_124042012	3300032076	Soil	GLDSTLIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGKPPDPPSS
Ga0306924_125116551	3300032076	Soil	TMIAGFQLMRIIVVLIWCRTALVLFQRAAEHVFGKPPDQ
Ga0318525_103040152	3300032089	Soil	KVLGLDSTMIAGFQLMRIIIVLIWCRTALVLFQRAAERVFGAPPDG
Ga0318540_101259182	3300032094	Soil	QLMRIIIVLIWCRTALVLFQRAAERVFGKPPEPPSS
Ga0307470_101695172	3300032174	Hardwood Forest Soil	MIAGFQLMRILIVLVWCRTALVLFRRVAEWTFSPPPNDKRA
Ga0306920_1018317592	3300032261	Soil	FQLMRIIIVLIWCRTALVLFKRAAERVFGAPPDSSSS