Metagenome Family F071283

Basic Information
Family ID	F071283
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	70 residues
Representative Sequence	QQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGN
Number of Associated Samples	107
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.75 %
% of genes near scaffold ends (potentially truncated)	62.30 %
% of genes from short scaffolds (< 2000 bps)	57.38 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (59.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (9.836 % of family members)
Environment Ontology (ENVO)	Unclassified (45.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.836 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.70% β-sheet: 0.00% Coil/Unstructured: 38.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02515	CoA_transf_3	30.33
PF13561	adh_short_C2	18.03
PF07690	MFS_1	7.38
PF00440	TetR_N	6.56
PF03631	Virul_fac_BrkB	5.74
PF00496	SBP_bac_5	4.10
PF05099	TerB	0.82
PF00106	adh_short	0.82
PF13347	MFS_2	0.82
PF12823	DUF3817	0.82
PF00171	Aldedh	0.82
PF13472	Lipase_GDSL_2	0.82
PF01957	NfeD	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	30.33
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	5.74
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.82
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.82
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.82
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.72 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	25.41 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.64 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.82 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	0.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	0.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10176739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1274	Open in IMG/M
3300004463\|Ga0063356_104017716	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300005187\|Ga0066675_11112329	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005336\|Ga0070680_100109464	All Organisms → cellular organisms → Bacteria → Proteobacteria	2299	Open in IMG/M
3300005338\|Ga0068868_100560253	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300005339\|Ga0070660_100056516	All Organisms → cellular organisms → Bacteria → Proteobacteria	3036	Open in IMG/M
3300005344\|Ga0070661_100574047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	909	Open in IMG/M
3300005356\|Ga0070674_100359529	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005367\|Ga0070667_100257886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1560	Open in IMG/M
3300005436\|Ga0070713_101444535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	667	Open in IMG/M
3300005437\|Ga0070710_10311021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1031	Open in IMG/M
3300005458\|Ga0070681_11904101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	522	Open in IMG/M
3300005539\|Ga0068853_100177628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300005840\|Ga0068870_10097564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1654	Open in IMG/M
3300006358\|Ga0068871_100912812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	814	Open in IMG/M
3300006854\|Ga0075425_100199730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	2298	Open in IMG/M
3300006854\|Ga0075425_102579084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	562	Open in IMG/M
3300006904\|Ga0075424_102515304	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300009174\|Ga0105241_10345599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1290	Open in IMG/M
3300009174\|Ga0105241_10825866	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300009176\|Ga0105242_12950881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	526	Open in IMG/M
3300010337\|Ga0134062_10369800	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300010360\|Ga0126372_10069408	All Organisms → cellular organisms → Bacteria → Proteobacteria	2498	Open in IMG/M
3300010373\|Ga0134128_10593158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1233	Open in IMG/M
3300010396\|Ga0134126_10924039	Not Available	980	Open in IMG/M
3300010396\|Ga0134126_10938024	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012200\|Ga0137382_10094099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1966	Open in IMG/M
3300012208\|Ga0137376_10284858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1434	Open in IMG/M
3300012532\|Ga0137373_10918382	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300012897\|Ga0157285_10067229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	916	Open in IMG/M
3300012955\|Ga0164298_10565721	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012971\|Ga0126369_12458067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	607	Open in IMG/M
3300012989\|Ga0164305_12052618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300013297\|Ga0157378_10670519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1054	Open in IMG/M
3300013306\|Ga0163162_10668511	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300013306\|Ga0163162_11829901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	694	Open in IMG/M
3300014497\|Ga0182008_10713517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	574	Open in IMG/M
3300014968\|Ga0157379_10729629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	931	Open in IMG/M
3300015371\|Ga0132258_12039400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1443	Open in IMG/M
3300015373\|Ga0132257_100040935	All Organisms → cellular organisms → Bacteria → Proteobacteria	5104	Open in IMG/M
3300017656\|Ga0134112_10434567	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300019881\|Ga0193707_1130540	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300021080\|Ga0210382_10013132	All Organisms → cellular organisms → Bacteria → Proteobacteria	2869	Open in IMG/M
3300021418\|Ga0193695_1125489	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021445\|Ga0182009_10841983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	504	Open in IMG/M
3300022883\|Ga0247786_1103584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	617	Open in IMG/M
3300025321\|Ga0207656_10030884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2216	Open in IMG/M
3300025898\|Ga0207692_10639549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	686	Open in IMG/M
3300025920\|Ga0207649_11229801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300025923\|Ga0207681_10468503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1027	Open in IMG/M
3300025929\|Ga0207664_10714231	Not Available	901	Open in IMG/M
3300025945\|Ga0207679_11109924	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300025949\|Ga0207667_10619963	Not Available	1089	Open in IMG/M
3300025949\|Ga0207667_11355144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	686	Open in IMG/M
3300025949\|Ga0207667_12059110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300026095\|Ga0207676_10142338	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300026095\|Ga0207676_12243996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	544	Open in IMG/M
3300026095\|Ga0207676_12244561	Not Available	544	Open in IMG/M
3300026116\|Ga0207674_10482177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1199	Open in IMG/M
3300026121\|Ga0207683_11592538	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300026530\|Ga0209807_1131080	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300026548\|Ga0209161_10130355	Not Available	1475	Open in IMG/M
3300026550\|Ga0209474_10153453	Not Available	1498	Open in IMG/M
3300027471\|Ga0209995_1064314	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300028381\|Ga0268264_12461643	Not Available	526	Open in IMG/M
3300028608\|Ga0247819_10708353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	616	Open in IMG/M
3300028870\|Ga0302254_10272587	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300028889\|Ga0247827_10866607	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300029984\|Ga0311332_10681538	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300030048\|Ga0302273_1018877	All Organisms → cellular organisms → Bacteria → Proteobacteria	2093	Open in IMG/M
3300031232\|Ga0302323_101228541	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300031538\|Ga0310888_10318772	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031770\|Ga0318521_10137238	All Organisms → cellular organisms → Bacteria → Proteobacteria	1379	Open in IMG/M
3300031781\|Ga0318547_10327868	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300031879\|Ga0306919_10655719	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031938\|Ga0308175_101559085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	738	Open in IMG/M
3300031954\|Ga0306926_11734080	Not Available	711	Open in IMG/M
3300032065\|Ga0318513_10030822	All Organisms → cellular organisms → Bacteria → Proteobacteria	2315	Open in IMG/M
3300032067\|Ga0318524_10291817	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300032075\|Ga0310890_11292129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.00%
Host-Associated	Host-Associated	50.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	48.36%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.13%
Peat	Environmental → Terrestrial → Peat	3.28%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.30%
Loam	Environmental → Terrestrial → Soil → Loam	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	9.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.46%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1195363781	3300000956	Soil	LRGYLLIMRLERAANMRDLHDLLPDVAKALVKRIGVEAATPIVNDLEQLTGVRRG*
soilH2_101767392	3300003324	Sugarcane Root And Bulk Soil	YGLMMRLQKTANVRDLHDLLPDFAKALVKRLGIEPATPIVSSIERLITGI*
Ga0063356_1040177162	3300004463	Arabidopsis Thaliana Rhizosphere	QQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGN*
Ga0062595_1002613782	3300004479	Soil	KMMDAAINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSGA*
Ga0066675_111123291	3300005187	Soil	RGYGLMMRLQKAGNLRDLHELLRDLAAALVKRIGIETATPVISEIESLIVVRH*
Ga0065715_107795911	3300005293	Miscanthus Rhizosphere	QKMMDAAINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSGA*
Ga0070680_1001094643	3300005336	Corn Rhizosphere	FRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ*
Ga0068868_1005602532	3300005338	Miscanthus Rhizosphere	ERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSAIERLITGN*
Ga0070660_1000565164	3300005339	Corn Rhizosphere	GYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ*
Ga0070660_1018264552	3300005339	Corn Rhizosphere	APAQRSEDEVERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGH*
Ga0070661_1005740471	3300005344	Corn Rhizosphere	MMSDAVNAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAASIVSSIERLITGT*
Ga0070675_1015494592	3300005354	Miscanthus Rhizosphere	AINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSGA*
Ga0070674_1003595291	3300005356	Miscanthus Rhizosphere	HLGFRGYGMMMKLQKTANIRDLHDLLRDFAAALVKRAGLETASPIVDEIEDLIHPRK*
Ga0070667_1002578863	3300005367	Switchgrass Rhizosphere	RFLMAQQRMSDATNKHLGFRGYGLMMRLQKTANIRDLRDLLPDFAASLVKRAGVETATPIVAEVEALLAARAG*
Ga0070709_103597891	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA*
Ga0070713_1014445352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AQQMMSDAINAHLGFRGYGLMMRLQRTANVRDLHDLLPDFAKSLVKRLGIEPATPVVSSIERLITGN*
Ga0070710_103110211	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	NQHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ*
Ga0070711_1008649212	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TEDEVQRFMRAQQMMSDAINQHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ*
Ga0066687_107630162	3300005454	Soil	EDEVERYLRAQQMMSDAINGHLGFRGYGLMMRLQKAGNLRDLHELLRDVAAALVKRIGIEAATPVISEIESLIVVRH*
Ga0070681_119041011	3300005458	Corn Rhizosphere	SDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0068853_1001776281	3300005539	Corn Rhizosphere	TNKHLGFRGYGLMMRLQKTANIRDLRDLLPDFAAALVKRAGVETATPIVAEIETLLATRAG*
Ga0068856_1015681151	3300005614	Corn Rhizosphere	TPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA*
Ga0068852_1020712991	3300005616	Corn Rhizosphere	DPAGATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA*
Ga0068851_101804431	3300005834	Corn Rhizosphere	AGPASAATPQRTEDEIERYMQAQQMMSDAINAHLGFRGYGMMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT*
Ga0068851_108552261	3300005834	Corn Rhizosphere	ARSEDEVQRYLQAQQLLSDAINQHLGFRGYGLMMRLQKTANIRDLHDLLPDFAKALVKRIGMGPATPIVEAIERLIARQ*
Ga0068870_100975644	3300005840	Miscanthus Rhizosphere	RMSDATNKHLGFRGYGLMMRLQKTANIRDLRDLLPDFAAALVKRAGVETATPIVAEIETLLATRAG*
Ga0068871_1009128121	3300006358	Miscanthus Rhizosphere	NAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0075425_1001997301	3300006854	Populus Rhizosphere	INAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGT*
Ga0075425_1025790842	3300006854	Populus Rhizosphere	PVRSEDEVQRYLRAQQLMSDATNKYMGFRGYGMMMRLQRTANIRDLRDLLPDFAAALLKRTGAEVATPLVAEIEAILLQGKG*
Ga0075424_1025153041	3300006904	Populus Rhizosphere	DEVERYMQAQRMMSDAINQHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ*
Ga0075436_1000700584	3300006914	Populus Rhizosphere	SVARRDPAGATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA*
Ga0075423_103486761	3300009162	Populus Rhizosphere	DAASDMVEPQRSDDEVERYLRAQQMISDAINRHLGFRGYGLMMRLQKAGNLRDLHELLRDLASTLVKRVGVEAATPIISAIESLIVVRQ*
Ga0075423_114855751	3300009162	Populus Rhizosphere	EAAAAPAQRSEDEVERYIQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRLGIEPATPIVSSIERLITGT*
Ga0105241_103455991	3300009174	Corn Rhizosphere	DEITRYMQAQQMMSDAINTHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSAIERLITGN*
Ga0105241_108258661	3300009174	Corn Rhizosphere	MSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT*
Ga0105242_129508812	3300009176	Miscanthus Rhizosphere	MSDATNAHLGFRGYGMMMRLQKTSQLRDLHDLFPDFAATLVKRAGSQIASPILAEVQSLIDSKAAAA*
Ga0105248_110845272	3300009177	Switchgrass Rhizosphere	SPAQRSEDEIERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSAIERLITGN*
Ga0105237_116083191	3300009545	Corn Rhizosphere	QAPEQMQSARTQDEVERYLQAQQMMSDAINKHLGFRGYGLMMRLQKTANVRDIHDLLPDFAKALVKRIGMGPATPIVGAIERLITGH*
Ga0134062_103698001	3300010337	Grasslands Soil	ERYLRAQQMMSDAINSHLGFRGYGLMMRLQKAANLHELHDLLRDVAAVLVKRMGIDGATPIVSEIEQQIIVRQ*
Ga0126372_100694083	3300010360	Tropical Forest Soil	MRAQQMMSDAINRHLGFRGYGLMMRLQRTANVRDLHDLLPDFAKALVKRIGMGPATPIVSAIEQLTLGK*
Ga0134125_108244071	3300010371	Terrestrial Soil	EDEIERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT*
Ga0134128_105931581	3300010373	Terrestrial Soil	MMSDAINAHLGFRGYGMMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT*
Ga0134128_125727771	3300010373	Terrestrial Soil	VAQAPEQMQSARTQDEVERYLQAQQMMSDAINKHLGFRGYGLMMRLQKTANVRDIHDLLPDFAKALVKRIGMGPATPIVGAIERLITGH*
Ga0134126_109240392	3300010396	Terrestrial Soil	ARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA*
Ga0134126_109380242	3300010396	Terrestrial Soil	ERFIQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRLGIEPATPIVSSIERLIIGT*
Ga0137382_100940993	3300012200	Vadose Zone Soil	MMRLQKATNLRDLHDLLRELAMVLVKRIGIEGATPIVSEMERQIIPRQ*
Ga0137376_102848583	3300012208	Vadose Zone Soil	MMRLQKATNLRDLHDLLRELAMVLVKRIGIEGATPIVSEIERQIIPRQ*
Ga0137373_109183822	3300012532	Vadose Zone Soil	AINNHLGVRGYALMMRLQKATSLRELHDLLRDLATVLVKRIGIEGATPIVSEIERQIIPRQ*
Ga0157285_100672291	3300012897	Soil	MSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0164298_105657212	3300012955	Soil	RSDAINRHLGFRGHGLMLRLQKTSNIRDLHDLLPDFAKALVKRIGMGPATPIVETIERLIARQ*
Ga0164298_111486411	3300012955	Soil	RSEDEIERYIQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0126369_124580671	3300012971	Tropical Forest Soil	MMSDAINQHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVNAIERLIIQR*
Ga0164305_120526182	3300012989	Soil	SHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRLGIEPATPIVSSIERLITGS*
Ga0157369_115315362	3300013105	Corn Rhizosphere	PSVAQNDETMTPAQRSEDEVERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGN*
Ga0157378_100523365	3300013297	Miscanthus Rhizosphere	VAQNDATIAPAQRSEDEVERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0157378_106705191	3300013297	Miscanthus Rhizosphere	MSDAINAHLGFRGYGLMMRLQKTANIRDLHDLLPEFAKALVKRLGIEPATPLVSSIERLITGA*
Ga0163162_106685113	3300013306	Switchgrass Rhizosphere	LTAQQRMSDATNKHLGFRGYGLMMRLQKTANIRDLRDLLPDFAAALVKRAGVETATPIVAEIETLLATRAG*
Ga0163162_118299011	3300013306	Switchgrass Rhizosphere	AHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN*
Ga0157375_101973971	3300013308	Miscanthus Rhizosphere	MMDAAINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSGA*
Ga0182008_107135171	3300014497	Rhizosphere	YMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGH*
Ga0157379_107296291	3300014968	Switchgrass Rhizosphere	SDAINAHLGFRGYGLMMRLQKTANIRDLHDLLPEFAKALVKRLGIEPATPIVSSIERLITGA*
Ga0132258_120394002	3300015371	Arabidopsis Rhizosphere	LGFRGYGLMMKLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGTIERLITGQ*
Ga0132257_1000409356	3300015373	Arabidopsis Rhizosphere	SDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPEFAKALVKRLGIEPATPIVSSIERLITGT*
Ga0134112_104345671	3300017656	Grasslands Soil	INAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGT
Ga0184619_100464713	3300018061	Groundwater Sediment	VAAQRSEDDVKRFMRGQQMISDAINKHLGFRGYGLMMRLQKTANIRDLHDLLREVAAALVKRVGIETATPIVASIEALIDPKK
Ga0193707_11305402	3300019881	Soil	GFRGYGLMMRLQKAANLRELHDLLRDFAAVLVKRIGIERATPIVSEIEQKIIPRQ
Ga0210382_100131321	3300021080	Groundwater Sediment	DAINKHLGFRGYGLMMRLQKTANIRDLHDLLREVAAALVKRVGIETATPIVASIEALIDPKK
Ga0193695_11254892	3300021418	Soil	NKHLGFRGYGLMMRLQKTANIRDLHDLLREVAAALVKRVGIETATPIVASIEALIDPRK
Ga0182009_108419831	3300021445	Soil	RFMQAQQLMSDAINEHMGFRGYGLMMRLQKTGDVRDLHDLLPDFAKSLVKRIGMGPATPIVETIERLITGR
Ga0247786_11035842	3300022883	Soil	AHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN
Ga0207697_100875582	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MMDAAINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSGA
Ga0207656_100308843	3300025321	Corn Rhizosphere	RGYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ
Ga0207692_106395491	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QMMSDAINQHLGFRGYGLMMRLQKTASIRDIHDLLPDFAKALVKRVGIEPATPIVSSIERLLTG
Ga0207680_113294281	3300025903	Switchgrass Rhizosphere	AINNHLGFWGYGLMLRLQKTGNLRDLHDLLPDVAKALVKKIGFDAATPIVNEMEQVIKSG
Ga0207705_102018571	3300025909	Corn Rhizosphere	VPSARSEDEVQRYLQAQQLLSDAINQHLGFRGYGLMMRLQKTANIRDLHDLLPDFAKALVKRIGMGPATPIVEAIERLIARQ
Ga0207657_105791811	3300025919	Corn Rhizosphere	PSVAQNDPTMAPAQRSEDEVERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGH
Ga0207649_111664581	3300025920	Corn Rhizosphere	QRSEDEVERYLRAQQMMSDAINSHLGFRGYGLMMRLQKAANLRDLHELLRDLASALVKRVGVDSATPIISGIESQIVVRQ
Ga0207649_112298011	3300025920	Corn Rhizosphere	AINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGH
Ga0207681_104685032	3300025923	Switchgrass Rhizosphere	YMQAQQLMSDAINAHLGFRGYGLMMRLQKTANIRDLHDLLPEFAKALVKRLGIEPATPIVSSIERLITGA
Ga0207700_114687472	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GEPAGATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA
Ga0207664_107142311	3300025929	Agricultural Soil	DAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA
Ga0207706_106850991	3300025933	Corn Rhizosphere	PSLAESDTPAAPRQRTEDEVERYMQAQQLMSDAINAHLGFRGYGLMMRLQKTANIRDLHDLLPEFAKALVKRLGIEPATPIVSSIERLITGA
Ga0207679_111099242	3300025945	Corn Rhizosphere	QMIGDAIEAHVGTHGHELLTRLEKTANVRDLHDLLPDFAKALVRRVGLEPATPIVSSIERLISGT
Ga0207667_106199632	3300025949	Corn Rhizosphere	GFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGH
Ga0207667_113551441	3300025949	Corn Rhizosphere	QMMSDAINSHLGFRGYGLMMRLQKAANLRDLHELLRDLASALVKRVGVDSATPIISGIESQIVVRQ
Ga0207667_120591101	3300025949	Corn Rhizosphere	LQAQQMMSDAINKHLGFRGYGLMMRLQKTANVRDIHDLLPDFAKALVKRIGMGPATPIVGAIERLITGH
Ga0207640_116997171	3300025981	Corn Rhizosphere	EPQRSEDEVERYLRAQQMMSDAINSHLGFRGYGLMMRLQKAANLRDLHELLRDLASALVKRVGVDSATPIISGIESQIVVRQ
Ga0207702_113759712	3300026078	Corn Rhizosphere	AGATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA
Ga0207676_101423381	3300026095	Switchgrass Rhizosphere	DAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITG
Ga0207676_122439961	3300026095	Switchgrass Rhizosphere	GYGLMMRLQKTANVRDLHDLLPDFAKALVKRIGMGPATPIVGAIERLITGQ
Ga0207676_122445612	3300026095	Switchgrass Rhizosphere	SDAINKHLGFRGYGLMMRLQKTANVRDIHDLLPDFAKALVKRIGMAPATPIVDAIERLITRR
Ga0207674_104821772	3300026116	Corn Rhizosphere	DEIERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0207683_115925382	3300026121	Miscanthus Rhizosphere	MEYPNNMMSDAINTHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVFFIERLIT
Ga0209807_11310801	3300026530	Soil	QMMSDAINSHLGFRGYGLMMRLQKAANLHELHDLLRDVAAVLVKRMGIDGATPIVSEIEQQIIVRQ
Ga0209161_101303551	3300026548	Soil	LGFRGYGLMMRLQKAANLHELHDLLRDVAAVLVKRMGIDGATPIVSEIEQQIIVRQ
Ga0209474_101534533	3300026550	Soil	EVERYMRAQRMMSDAINKHLGFRGYGLMMRLQKASTLRDLHQLLRDVAAALVKRMGVEAATPIVSEIEHHIVPRQ
Ga0209995_10643142	3300027471	Arabidopsis Thaliana Rhizosphere	LGFRGYGLTMRLQKTANVRDLHDLLPDFAKALVKRLGIEPATPIVSSIERLITGT
Ga0268266_101775583	3300028379	Switchgrass Rhizosphere	APSVAQNDETMTPAQRSEDEVERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGN
Ga0268264_124616431	3300028381	Switchgrass Rhizosphere	KHMGFRGYGMMMRLQKTANIRDLRDLLPDFAAALLKRAGAEVATPIVAEVEAILLQGQG
Ga0247819_107083531	3300028608	Soil	YMQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDFAKSLVKRLGLEPATPIVSSIERLITGN
Ga0302254_102725871	3300028870	Fen	FRGYGLMMRLQKTENLRDLHEMLPDFAQSLVKRKGMEFATPIVAALEQMIVRKA
Ga0247827_108666071	3300028889	Soil	AINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0311332_106815382	3300029984	Fen	AINEHLGFRGYGLMMRLQKTENLRDLHEMLPDFAQSLVKRKGMEFATPIVAALEQMIVRK
Ga0302273_10188773	3300030048	Bog	NEHLGFRGYGLMMRLQKTENLRDLHEMLPDFAQSLVKRKGMEFATPIVAALEQMIVRKA
Ga0302323_1012285411	3300031232	Fen	NEHLGFRGYGLMMRLQKTENLRDLHEMLPDFAQSLVKRKGMEAATPIVSALEQMIVRKAG
Ga0310888_103187721	3300031538	Soil	NAHLGFRGYGMMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0318496_101728502	3300031713	Soil	AAPPETDATPTERTEDEVERFMRAQQMMSDAINRHLGFRGYGLMMRLQRTANVRDIHDLLPDFAKALVKRIGMGPATPIVSAIEQLTLGK
Ga0310813_120240121	3300031716	Soil	ATPERSQDEVARYVQAQQMISDAIDAHLGFRGYGLTMRLQKTASIRDLHDLLPDFAKALVKRVGIEPATPIVSSIERLITGA
Ga0318521_101372382	3300031770	Soil	INRHLGFRGYGLMMRLQRTANVRDIHDLLPDFAKALVKRIGMGPATPIVSAIEQLTLGK
Ga0318547_103278682	3300031781	Soil	RYLRAQQLMSDATNKHMGFRGYGMMMRLQKTANIRDLRDLLPDFAGSLLKRAGADVATPIVTEVEAILLQASG
Ga0307413_101653251	3300031824	Rhizosphere	AGPASAASPQRTEDEIERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0306919_106557191	3300031879	Soil	YLRAQQLMSDATNKHMGFRGYGMMMRLQKTANIRDLRDLLPDFAGSLLKRAGADVATPIVTEVEAILLQASG
Ga0310900_111077793	3300031908	Soil	AAGPASAATPQRTEDEIERYMQAQQMMSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0308175_1015590851	3300031938	Soil	QAQQMMSDAINAHLGFRGYGLMMRLQKTENVRDLHDLLPDFAKSLVKRLGIEPATPIVSSIERLITGS
Ga0306926_117340801	3300031954	Soil	EDEVERYLRAQQLMSDATNKHMGFRGYGMMMRLQKTANIRDLRDLLPDFAGSLLKRAGADVATPIVTEVEAILLQASG
Ga0308176_114868152	3300031996	Soil	AQNPAGAQNVRSEDEVQRYMQAQQMMSDAINAHLGFRGYGLMMRLQKTGNVRDLHDLLPEFAKALVKRIGMGPATPIVGAIERLIIGQPPAPSA
Ga0310897_103696782	3300032003	Soil	AAAGPASAATPQRTEDEIERYMQAQQMMSDAINAHLGFRGYGMMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0318513_100308223	3300032065	Soil	RHLGFRGYGLMMRLQRTANVRDIHDLLPDFAKALVKRIGMGPATPIVSAIEQLTLGK
Ga0318524_102918172	3300032067	Soil	SEDEVERYLRAQQLMSDATNKHMGFRGYGMMMRLQKTANIRDLRDLLPDFAGSLLKRAGADVATPIVTEVEAILLQASG
Ga0310890_112921293	3300032075	Soil	QQMMSDAINAHLGFRGYGLMMRLQKTATVRDLHDLLPDFAKALVKRLGIEPAAPIVSSIERLITGT
Ga0318525_100815292	3300032089	Soil	SAAPPETDATPTERTEDEVERFMRAQQMMSDAINRHLGFRGYGLMMRLQRTANVRDIHDLLPDFAKALVKRIGMGPATPIVSAIEQLTLGK
Ga0316624_118536752	3300033486	Soil	AAPQRSQDEVERYLQAQQMMSDAINAHLGFRGYGLMMRLQKTANVRDLHDLLPDLAKALVKRLGIEPATPVVSSIERLLTGP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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