Metagenome / Metatranscriptome Family F071172

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071172
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	71 residues
Representative Sequence	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Number of Associated Samples	77
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	24.59 %
% of genes near scaffold ends (potentially truncated)	22.95 %
% of genes from short scaffolds (< 2000 bps)	69.67 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (44.262 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient (22.131 % of family members)
Environment Ontology (ENVO)	Unclassified (36.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (39.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
b.2.5.5: STAT DNA-binding domain	d1uura2	1uur	0.63275
a.172.1.1: Helical scaffold and wing domains of SecA	d3dina2	3din	0.59442
a.118.1.2: HEAT repeat	d1b3ua_	1b3u	0.58834
c.37.1.20: Extended AAA-ATPase domain	d1svma_	1svm	0.58301
a.118.1.19: Exportin HEAT-like repeat	d3ibva_	3ibv	0.57219

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF12098	DUF3574	4.92
PF04965	GPW_gp25	1.64
PF07275	ArdA	1.64
PF08681	DUF1778	0.82
PF04851	ResIII	0.82
PF13392	HNH_3	0.82
PF03237	Terminase_6N	0.82
PF10979	DUF2786	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	1.64
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.56 %
Unclassified	root	N/A	43.44 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	56.56 %
Unclassified	root	N/A	43.44 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.66 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.66 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.66 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.66 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.92 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	2.46 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.82 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.92 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	0.82 %
unclassified Kyanoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae	0.82 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Bellamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus	2.46 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	0.82 %
Nodensvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus	0.82 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
unclassified Bellamyvirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus	2.46 %
Synechococcus virus SPM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	0.82 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	0.82 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.26 %
Unclassified	root	N/A	43.44 %
Synechococcus phage SynMITS9220M01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	2.46 %
Synechococcus virus SPM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	0.82 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	0.82 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1049107	Not Available	862	Open in IMG/M
3300000929\|NpDRAFT_10030568	All Organisms → Viruses	1064	Open in IMG/M
3300001282\|B570J14230_10172564	Not Available	607	Open in IMG/M
3300002835\|B570J40625_100001695	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	40496	Open in IMG/M
3300003430\|JGI25921J50272_10038309	All Organisms → Viruses → Predicted Viral	1144	Open in IMG/M
3300003430\|JGI25921J50272_10080814	Not Available	701	Open in IMG/M
3300004240\|Ga0007787_10219170	Not Available	930	Open in IMG/M
3300005662\|Ga0078894_10330990	All Organisms → Viruses → Predicted Viral	1380	Open in IMG/M
3300005662\|Ga0078894_10697066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	896	Open in IMG/M
3300005805\|Ga0079957_1007331	Not Available	8674	Open in IMG/M
3300005805\|Ga0079957_1040800	All Organisms → Viruses → Predicted Viral	2945	Open in IMG/M
3300005805\|Ga0079957_1062464	All Organisms → Viruses → Predicted Viral	2201	Open in IMG/M
3300005805\|Ga0079957_1217800	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	908	Open in IMG/M
3300005940\|Ga0073913_10002604	All Organisms → Viruses → Predicted Viral	2401	Open in IMG/M
3300005943\|Ga0073926_10002653	All Organisms → Viruses → Predicted Viral	3254	Open in IMG/M
3300006005\|Ga0073910_1000238	All Organisms → Viruses → Predicted Viral	3582	Open in IMG/M
3300006639\|Ga0079301_1001051	Not Available	13124	Open in IMG/M
3300007538\|Ga0099851_1255359	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	626	Open in IMG/M
3300007544\|Ga0102861_1001936	Not Available	4484	Open in IMG/M
3300007544\|Ga0102861_1153946	Not Available	625	Open in IMG/M
3300007972\|Ga0105745_1002582	Not Available	3853	Open in IMG/M
3300007972\|Ga0105745_1250345	Not Available	569	Open in IMG/M
3300007973\|Ga0105746_1004543	All Organisms → Viruses → Predicted Viral	3803	Open in IMG/M
3300008055\|Ga0108970_11508622	Not Available	501	Open in IMG/M
3300008110\|Ga0114343_1054712	All Organisms → Viruses → Predicted Viral	1527	Open in IMG/M
3300008262\|Ga0114337_1165773	All Organisms → Viruses → Predicted Viral	1527	Open in IMG/M
3300009051\|Ga0102864_1012495	All Organisms → Viruses → Predicted Viral	2168	Open in IMG/M
3300009056\|Ga0102860_1030396	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300009152\|Ga0114980_10235850	Not Available	1070	Open in IMG/M
3300010354\|Ga0129333_10059700	All Organisms → Viruses → Predicted Viral	3558	Open in IMG/M
3300010354\|Ga0129333_10060016	All Organisms → Viruses → Predicted Viral	3548	Open in IMG/M
3300010354\|Ga0129333_10092771	All Organisms → Viruses → Predicted Viral	2791	Open in IMG/M
3300010354\|Ga0129333_10287046	All Organisms → Viruses → Predicted Viral	1475	Open in IMG/M
3300010354\|Ga0129333_10348749	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300010354\|Ga0129333_10403560	All Organisms → Viruses → Predicted Viral	1209	Open in IMG/M
3300010354\|Ga0129333_10404425	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300010354\|Ga0129333_10439700	All Organisms → Viruses → Predicted Viral	1150	Open in IMG/M
3300010354\|Ga0129333_10447478	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300010354\|Ga0129333_10579866	Not Available	975	Open in IMG/M
3300010354\|Ga0129333_10580355	Not Available	975	Open in IMG/M
3300010354\|Ga0129333_10657927	Not Available	904	Open in IMG/M
3300010354\|Ga0129333_10750719	Not Available	835	Open in IMG/M
3300010354\|Ga0129333_10755360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	832	Open in IMG/M
3300010354\|Ga0129333_10790975	Not Available	809	Open in IMG/M
3300010354\|Ga0129333_10840309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	780	Open in IMG/M
3300010354\|Ga0129333_10994244	Not Available	705	Open in IMG/M
3300010354\|Ga0129333_11014394	Not Available	697	Open in IMG/M
3300010354\|Ga0129333_11136551	Not Available	651	Open in IMG/M
3300010354\|Ga0129333_11429214	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	568	Open in IMG/M
3300010354\|Ga0129333_11436348	Not Available	567	Open in IMG/M
3300010370\|Ga0129336_10117954	All Organisms → Viruses → Predicted Viral	1548	Open in IMG/M
3300010370\|Ga0129336_10168933	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300010370\|Ga0129336_10187196	All Organisms → Viruses → Predicted Viral	1183	Open in IMG/M
3300010370\|Ga0129336_10207223	All Organisms → Viruses → Predicted Viral	1114	Open in IMG/M
3300010370\|Ga0129336_10356269	Not Available	804	Open in IMG/M
3300010370\|Ga0129336_10685863	Not Available	543	Open in IMG/M
3300011268\|Ga0151620_1002135	Not Available	7492	Open in IMG/M
3300012000\|Ga0119951_1010675	All Organisms → Viruses → Predicted Viral	3779	Open in IMG/M
3300012017\|Ga0153801_1024241	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300012968\|Ga0129337_1029045	Not Available	727	Open in IMG/M
3300012968\|Ga0129337_1342756	Not Available	576	Open in IMG/M
3300012968\|Ga0129337_1423179	Not Available	872	Open in IMG/M
3300012970\|Ga0129338_1375682	Not Available	586	Open in IMG/M
3300013004\|Ga0164293_10333932	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300013004\|Ga0164293_10653837	Not Available	678	Open in IMG/M
3300013004\|Ga0164293_10781832	Not Available	606	Open in IMG/M
3300014811\|Ga0119960_1098400	Not Available	524	Open in IMG/M
3300014819\|Ga0119954_1002266	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	5861	Open in IMG/M
3300017766\|Ga0181343_1000673	Not Available	14459	Open in IMG/M
3300017780\|Ga0181346_1257147	Not Available	607	Open in IMG/M
3300017785\|Ga0181355_1047047	All Organisms → Viruses → Predicted Viral	1838	Open in IMG/M
3300019784\|Ga0181359_1032673	All Organisms → Viruses → Predicted Viral	2011	Open in IMG/M
3300020048\|Ga0207193_1167053	All Organisms → Viruses → Predicted Viral	1808	Open in IMG/M
3300020488\|Ga0208051_113115	Not Available	631	Open in IMG/M
3300020518\|Ga0208721_1023224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	784	Open in IMG/M
3300020560\|Ga0208852_1076820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	513	Open in IMG/M
3300020570\|Ga0208465_1003686	All Organisms → Viruses → Predicted Viral	2610	Open in IMG/M
3300021323\|Ga0210295_1056301	Not Available	711	Open in IMG/M
3300021959\|Ga0222716_10339709	Not Available	893	Open in IMG/M
3300021961\|Ga0222714_10506781	Not Available	618	Open in IMG/M
3300021961\|Ga0222714_10620831	Not Available	537	Open in IMG/M
3300021962\|Ga0222713_10127219	All Organisms → Viruses → Predicted Viral	1789	Open in IMG/M
3300021963\|Ga0222712_10001508	All Organisms → Viruses	28593	Open in IMG/M
3300021963\|Ga0222712_10774750	Not Available	531	Open in IMG/M
3300022223\|Ga0224501_10253843	Not Available	929	Open in IMG/M
3300022407\|Ga0181351_1006764	All Organisms → Viruses → Predicted Viral	4472	Open in IMG/M
3300022407\|Ga0181351_1019938	All Organisms → Viruses → Predicted Viral	2827	Open in IMG/M
3300022747\|Ga0228703_1059645	Not Available	993	Open in IMG/M
3300022748\|Ga0228702_1105309	Not Available	658	Open in IMG/M
3300022752\|Ga0214917_10035219	All Organisms → Viruses → Predicted Viral	3662	Open in IMG/M
3300026837\|Ga0209856_1000039	Not Available	6049	Open in IMG/M
3300026902\|Ga0209851_1000813	All Organisms → Viruses → Predicted Viral	4233	Open in IMG/M
3300027114\|Ga0208009_1001492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6608	Open in IMG/M
3300027121\|Ga0255074_1008631	All Organisms → Viruses → Predicted Viral	1385	Open in IMG/M
3300027129\|Ga0255067_1003884	All Organisms → Viruses → Predicted Viral	2474	Open in IMG/M
3300027142\|Ga0255065_1011072	All Organisms → Viruses → Predicted Viral	1873	Open in IMG/M
3300027151\|Ga0255063_1007101	All Organisms → Viruses → Predicted Viral	2575	Open in IMG/M
3300027156\|Ga0255078_1006605	All Organisms → Viruses → Predicted Viral	2808	Open in IMG/M
3300027156\|Ga0255078_1092652	Not Available	577	Open in IMG/M
3300027508\|Ga0255072_1004220	All Organisms → Viruses → Predicted Viral	3164	Open in IMG/M
3300027547\|Ga0209864_1006971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1249	Open in IMG/M
3300027578\|Ga0255075_1002460	All Organisms → Viruses → Predicted Viral	4220	Open in IMG/M
3300027659\|Ga0208975_1006660	All Organisms → Viruses → Predicted Viral	4174	Open in IMG/M
3300027769\|Ga0209770_10261921	Not Available	667	Open in IMG/M
3300027797\|Ga0209107_10535271	Not Available	516	Open in IMG/M
3300032050\|Ga0315906_10715910	Not Available	801	Open in IMG/M
3300033557\|Ga0316617_100600328	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300033816\|Ga0334980_0010862	All Organisms → Viruses → Predicted Viral	3967	Open in IMG/M
3300033816\|Ga0334980_0062186	All Organisms → Viruses → Predicted Viral	1571	Open in IMG/M
3300033979\|Ga0334978_0178714	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300033979\|Ga0334978_0495958	Not Available	569	Open in IMG/M
3300034012\|Ga0334986_0082594	All Organisms → Viruses → Predicted Viral	1959	Open in IMG/M
3300034012\|Ga0334986_0438491	Not Available	655	Open in IMG/M
3300034062\|Ga0334995_0152368	All Organisms → Viruses → Predicted Viral	1667	Open in IMG/M
3300034062\|Ga0334995_0452739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	787	Open in IMG/M
3300034073\|Ga0310130_0089206	Not Available	923	Open in IMG/M
3300034082\|Ga0335020_0054537	All Organisms → Viruses → Predicted Viral	2096	Open in IMG/M
3300034102\|Ga0335029_0009259	Not Available	7630	Open in IMG/M
3300034102\|Ga0335029_0549629	Not Available	659	Open in IMG/M
3300034103\|Ga0335030_0270288	All Organisms → Viruses → Predicted Viral	1151	Open in IMG/M
3300034116\|Ga0335068_0406489	Not Available	650	Open in IMG/M
3300034284\|Ga0335013_0270762	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.98%
Terrestrial	Environmental → Terrestrial	8.20%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	51.64%
Marine	Environmental → Aquatic → Marine	39.34%
Soil	Environmental → Terrestrial → Soil	5.74%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.46%
Leaf	Host-Associated → Plants → Leaf	0.82%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.69%
Lake	Environmental → Aquatic → Freshwater → Lake	23.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.21%
River	Environmental → Aquatic → Freshwater → River	6.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.92%
Sand	Environmental → Terrestrial → Soil → Sand	4.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.10%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.64%
Creek	Environmental → Aquatic → Freshwater → Creek	1.64%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.82%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.82%
Sediment	Environmental → Aquatic → Marine → Sediment	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	28.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	22.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.48%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	6.56%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.92%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.92%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.10%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.64%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	22.13%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.84%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	6.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.92%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	4.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.10%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.10%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.10%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	3.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.46%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.46%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.64%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.64%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.64%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.82%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.82%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.82%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.82%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.82%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.82%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300005943	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14	Environmental	Open in IMG/M
3300006005	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_25-Nov-14	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020488	Freshwater microbial communities from Lake Mendota, WI - 17OCT2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020518	Freshwater microbial communities from Lake Mendota, WI - 17AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020560	Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020570	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021323	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300026837	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_25-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300026902	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14 (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027121	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental	Open in IMG/M
3300027151	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_0h	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027547	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10491071	3300000736	Freshwater And Sediment	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDED
NpDRAFT_100305683	3300000929	Freshwater And Marine	MLTENQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVESLRGKDEEEVLGEIAYVYDEDVIEELIEGVK*
B570J14230_101725641	3300001282	Freshwater	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE*
B570J40625_10000169534	3300002835	Freshwater	MTLTSQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ*
JGI25921J50272_100383092	3300003430	Freshwater Lake	MLLVGVSLVLISFTFLTLTEMNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTVQ*
JGI25921J50272_100808142	3300003430	Freshwater Lake	MNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTVQ*
Ga0007787_102191702	3300004240	Freshwater Lake	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFVYDTIVENMAGKSEEDVLNEIANVYDEDVIEELIESVTVA*
Ga0078894_103309903	3300005662	Freshwater Lake	MNLTSQQLNQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIAGVYDEEILQELVESVTP*
Ga0078894_106970661	3300005662	Freshwater Lake	SLVLISFTFLTLTEMNLTSQQLTQLVENYAERIVDDMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTV*
Ga0079957_100733125	3300005805	Lake	MTLTSQQLNQLVELYANSIVEDMDVKCLEQFVYDTICENMHHMGEEDVLNEIANVYDEDVIQELIAEVM*
Ga0079957_10408009	3300005805	Lake	MLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK*
Ga0079957_10624648	3300005805	Lake	MTLTDNQLDQLIDNYAERIVDDMDVKCLMQFVFDTIVENLRGKDEEEVLSEISYVYDEDVIQELIESVKN*
Ga0079957_12178003	3300005805	Lake	MNLTSEQLTQLVENYAERIIDEMDTKTLMQFAYDTIVDNMMNMGEEDVLNEISCVYDEEIVQELVESVTV*
Ga0073913_100026043	3300005940	Sand	MTLTSQQLDQLIDNYAERIVDEMDVKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0073926_100026537	3300005943	Sand	MSSEMTLTSQQLDQLIDNYAERIVDEMDVKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0073910_10002384	3300006005	Sand	MTLTSQQLDQLIDNYAERIVDEMDLKCLMQFAYDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0079301_10010512	3300006639	Deep Subsurface	MALTTDQLNQLVEAYAERCVNDMDTKCLEQFVYDTIVENLSHMGEEDVMDQLYGVYDDEVIQEMVESVTAD*
Ga0099851_12553592	3300007538	Aqueous	MTLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIKELMESVTV*
Ga0102861_10019361	3300007544	Estuarine	MSSEMTLTSQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ*
Ga0102861_11539462	3300007544	Estuarine	MSSEMTLTSQQLDQLIDNYAERIVDEMDLKCLMQFAYDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0105745_10025821	3300007972	Estuary Water	QLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ*
Ga0105745_12503451	3300007972	Estuary Water	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0105746_100454310	3300007973	Estuary Water	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0108970_115086221	3300008055	Estuary	MTLTSQQLDQLVENYAERIVDDMDTKCLIQFVYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVQ*
Ga0114343_10547124	3300008110	Freshwater, Plankton	MTLTSQQLNQLVELYANSIVEDMDVKCLEQFVYDTICENMHHMGEEDVLNEIANVYDEDVIQELIAEVTN*
Ga0114337_11657734	3300008262	Freshwater, Plankton	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTAE*
Ga0102864_10124958	3300009051	Estuarine	MSSEMTLTSQQLDQLVENYAERIVDEMDLKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0102860_10303965	3300009056	Estuarine	MSSEMTLTSQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEE
Ga0114980_102358503	3300009152	Freshwater Lake	MTLTSQQLDQLVKNYAERIVDEMDTKCLMQLAFDTVVENLCHLSEEDVLNEIANVYDENVIEELIESVTARPSTC*
Ga0129333_100597005	3300010354	Freshwater To Marine Saline Gradient	MTLTDTQLDQLIDNYADRIVDEMDLKCLIQFAYDTIVENLQGKSEEEVLTEISYVYDQDVVDELIEGVK*
Ga0129333_1006001613	3300010354	Freshwater To Marine Saline Gradient	MLTSQQLDRLIENYAERIVDDMDVKCLIQFVYDTIVTNMEHMNEEDVLNEIANVYDEDVIEELIEGVK*
Ga0129333_100927712	3300010354	Freshwater To Marine Saline Gradient	MTLTDTQLDQLIDNYAERIVDEMDLKCLIQFVYDTIVENLQGKSEEDVLNEISYVYDEDVIQELIEGVK*
Ga0129333_102870462	3300010354	Freshwater To Marine Saline Gradient	MTLTTQQLDQLVENYAERIVDEMDVKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVIQELIESVTVE*
Ga0129333_103487493	3300010354	Freshwater To Marine Saline Gradient	MLTSDQLDQLIDNYAERIVDEMDVKCLMQFVYDSIAENLRGKDEEEVLGEIAYVYDEDVIEELIESVTV*
Ga0129333_104035605	3300010354	Freshwater To Marine Saline Gradient	MTLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK*
Ga0129333_104044253	3300010354	Freshwater To Marine Saline Gradient	MSSEMTLTSQQLDQLIDNYAERIVDDMDVKCLMQFVFDTIVENLRGKDEEDVLTEISYVYDEDVIQELVESVTVQ*
Ga0129333_104397002	3300010354	Freshwater To Marine Saline Gradient	MTLTSQQLDQLVENYAERIVDEMDVKCLMQFVYDTIVENMAGKSEEDVLNEISYVYDEDVIQELVESVTVE*
Ga0129333_104474781	3300010354	Freshwater To Marine Saline Gradient	MTLTTQQLNQLVELYAERIVDDMDTKCLEQFVYDTICENMYHMGEEDVLNEIANVYDENVIQELVESVTVE*
Ga0129333_105798662	3300010354	Freshwater To Marine Saline Gradient	MTLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEISYVYDEDVIQELIESVTVQ*
Ga0129333_105803552	3300010354	Freshwater To Marine Saline Gradient	MSSEMTLTSQQLHQLVENYAERIVDEMDVKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELIESVTVQ*
Ga0129333_106579274	3300010354	Freshwater To Marine Saline Gradient	MSSEMTLTTAQLDQLVENYAERIVDEMDTKCLIQFVYDTIVENLAGKSEEDVLNEISYVYDEDVIQELVESVTVE*
Ga0129333_107507193	3300010354	Freshwater To Marine Saline Gradient	MLTSDQLDQLIDNYAERIVDEMDVKCLMQFVYDTIVENMAGKSEEDVLNEISYVYDEDVIEELIEGVK*
Ga0129333_107553603	3300010354	Freshwater To Marine Saline Gradient	NQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIESVK*
Ga0129333_107909752	3300010354	Freshwater To Marine Saline Gradient	ETMTLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEISYVYDEDVIQELIESVTVQ*
Ga0129333_108403093	3300010354	Freshwater To Marine Saline Gradient	MTLTDNQLDQLIDNYAERIVDEMDVKCLMQFAFDTIVENLRGKDEEEVLGEIAYVYDEDVIQELIESVTVQ*
Ga0129333_109942443	3300010354	Freshwater To Marine Saline Gradient	LMLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK*
Ga0129333_110143941	3300010354	Freshwater To Marine Saline Gradient	MLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEISYVYDEDVVEELIEGVK*
Ga0129333_111365512	3300010354	Freshwater To Marine Saline Gradient	LMSSEMTLTSQQLDQLVENYAERIVDEMDVKCLMQFVYDTLVENLAGKSEEDVLNEISYVYDEDVVEELIESVTVQ*
Ga0129333_114292142	3300010354	Freshwater To Marine Saline Gradient	MTLTSQQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIQELIESVTVE*
Ga0129333_114363482	3300010354	Freshwater To Marine Saline Gradient	MTLTTQQLDQLVENYAERIVDEMDVKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELIESVTVE*
Ga0129336_101179541	3300010370	Freshwater To Marine Saline Gradient	LTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELIESVTVQ*
Ga0129336_101689332	3300010370	Freshwater To Marine Saline Gradient	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELIESVTVQ*
Ga0129336_101871962	3300010370	Freshwater To Marine Saline Gradient	IENYAERIVDEMDVKCLIQFAYDTIVENMAGKSEEDVLNEISYVYDEDVVEELIESVTVQ
Ga0129336_102072231	3300010370	Freshwater To Marine Saline Gradient	MTLTTQQLDQLVENYAERIVDEMDVKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYD
Ga0129336_103562692	3300010370	Freshwater To Marine Saline Gradient	QLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIQELVESVTVA*
Ga0129336_106858631	3300010370	Freshwater To Marine Saline Gradient	MLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIE
Ga0151620_10021358	3300011268	Freshwater	MTLTTQQLNQLVELYAERIVDDMDTKCLEQFVYDTICENMYHMGEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0119951_10106754	3300012000	Freshwater	MLTDNQLDQLIDNYAERIVDDMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK*
Ga0153801_10242412	3300012017	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELIESVTVQ*
Ga0129337_10290451	3300012968	Aqueous	MLTSQQLDRLIENYAERIVDDMDVKCLIQFAYDTIVTNMEHMNEEDVLNEIANVYDEDVIQELVESVTV*
Ga0129337_13427561	3300012968	Aqueous	MTLTSQQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDED
Ga0129337_14231791	3300012968	Aqueous	MTLTSQQLDQLVENYAERIVDEMDVKCLIQFAYDTIVENFAGKSEEDVLTEISFVYDEDVIEELIESVTVE*
Ga0129338_13756822	3300012970	Aqueous	MSSEMTLTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE*
Ga0164293_103339322	3300013004	Freshwater	MTLTTAQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVA*
Ga0164293_106538372	3300013004	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTV*
Ga0164293_107818322	3300013004	Freshwater	SQQLNQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIAGVYDEETLQELVDGVTP*
Ga0119960_10984001	3300014811	Aquatic	MNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTV*
Ga0119954_10022667	3300014819	Freshwater	MTLTSQQLDRLIENYAERIVDDMDTKCLIQFVYDTIVTNMEHMNEEDVLNEIANVYDEDVIEELIEGVK*
Ga0181343_100067320	3300017766	Freshwater Lake	MNLTSQQLNQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIAGVYDEEILQELVESVTP
Ga0181346_12571472	3300017780	Freshwater Lake	MTLTSQQLDQLVENYAERIVDEMDTKCLMQLAYDTVVENLCHLSEEDVLNEIANVYDENV
Ga0181355_10470476	3300017785	Freshwater Lake	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFVYDTIVENMAGKSEEDVLNEIANVYDEDVIQELVESVTVE
Ga0181359_10326732	3300019784	Freshwater Lake	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFVYDTIVENMAGKSEEDVLNEIANVYDEDVIEELIESVTVA
Ga0207193_11670534	3300020048	Freshwater Lake Sediment	MMNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTV
Ga0208051_1131151	3300020488	Freshwater	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0208721_10232244	3300020518	Freshwater	MTLTSQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESV
Ga0208852_10768201	3300020560	Freshwater	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTV
Ga0208465_10036865	3300020570	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTV
Ga0210295_10563014	3300021323	Estuarine	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESV
Ga0222716_103397092	3300021959	Estuarine Water	MLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK
Ga0222714_105067811	3300021961	Estuarine Water	TRFLMLTDNQLDQLIDNYAERIVDEMDVKCLMQFVFDTIVENLRGKDEEEVLGEIAYVYDEDVIEELIEGVK
Ga0222714_106208313	3300021961	Estuarine Water	MTLTSQQLDQLIDNYAERIVDEMDLKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0222713_101272193	3300021962	Estuarine Water	SATVQLRTLHFLKMTLTSQQLDQLIDNYAERIVDEMDLKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0222712_100015083	3300021963	Estuarine Water	MSSEMTLTSQQLDQLIDNYAERIVDEMDLKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0222712_107747503	3300021963	Estuarine Water	MTLTSQQLDQLVENYAERIVDEMDVKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTV
Ga0224501_102538433	3300022223	Sediment	MTLTSEQINRLVDLYAERIVDDMDTKCLEQFVYDTICENMHYMGEEDVLNEIANVYDEDVIQELIAEVTN
Ga0181351_100676410	3300022407	Freshwater Lake	MNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTV
Ga0181351_10199386	3300022407	Freshwater Lake	MNLTSQQLNQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTV
Ga0228703_10596452	3300022747	Freshwater	MTLTDNQLDRLIDNYAERIVDDMDVKCLMQFVYDTIVENLRGKDEEEVLGEIAYVYDEDVIKELMESVTVE
Ga0228702_11053092	3300022748	Freshwater	MTLTDNQLDQLIDNYAERIVDDMDVKCLMQFVYDTIVENLRGKDEEEVLGEIAYVYDEDVIKELMESVTVE
Ga0214917_100352195	3300022752	Freshwater	MTLTSQQLDRLIENYAERIVDDMDTKCLIQFVYDTIVTNMEHMNEEDVLNEIANVYDEDVIEELIEGVK
Ga0209856_10000398	3300026837	Sand	MTLTSQQLDQLIDNYAERIVDEMDLKCLMQFAYDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0209851_10008137	3300026902	Sand	MTLTSQQLDQLIDNYAERIVDEMDVKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0208009_10014925	3300027114	Deep Subsurface	MALTTDQLNQLVEAYAERCVNDMDTKCLEQFVYDTIVENLSHMGEEDVMDQLYGVYDDEVIQEMVESVTAD
Ga0255074_10086312	3300027121	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDLKCLMQFAYDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0255067_10038842	3300027129	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0255065_10110722	3300027142	Freshwater	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0255063_10071016	3300027151	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDLKCLMQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0255078_10066057	3300027156	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDVKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0255078_10926523	3300027156	Freshwater	MTLTSQQLDQLVENYAERIVDEMDVKCLIQFVYDTIVENMAGKSEEDVLNEISYVYDEDVIQELVESVTVE
Ga0255072_10042202	3300027508	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0209864_10069711	3300027547	Sand	VLMSSEMTLTSQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ
Ga0255075_10024606	3300027578	Freshwater	MTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVGNLSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0208975_100666010	3300027659	Freshwater Lentic	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0209770_102619213	3300027769	Freshwater Lake	MNLTSQQLTQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIANVYDEDVIQELVESVTVQ
Ga0209107_105352711	3300027797	Freshwater And Sediment	MTLTSQQLDQLIDNYAERIVDEMDLKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELV
Ga0315906_107159102	3300032050	Freshwater	MPLTSQQLDQLVENYAERIVEDMDTRCLEQFVYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVEGVTV
Ga0316617_1006003281	3300033557	Soil	MTLTTQQLNQLVELYAERIVDDMDTKCLEQFVYDTICENMYHMGEEDVLNEIANVYDEDVIQELVESVTVE
Ga0334980_0010862_3233_3448	3300033816	Freshwater	MNLTSQQLNQLVENYAERIVDDMDTKCLIQFVYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVQ
Ga0334980_0062186_595_810	3300033816	Freshwater	MTLTSQQLDQLIDNYAERIVDEMDTKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0334978_0178714_112_327	3300033979	Freshwater	MTLTTAQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVA
Ga0334978_0495958_3_206	3300033979	Freshwater	SQQLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ
Ga0334986_0082594_339_554	3300034012	Freshwater	MTLTTAQLDQLVENYAERIVDEMDLKCLIQFVYDTIVENLAGKSEEDVLNEISYVYDEDVIQELVESVTVE
Ga0334986_0438491_331_558	3300034012	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLMQFVFDTIVENMSHMNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0334995_0152368_1079_1294	3300034062	Freshwater	MTLTSQQLDQLVENYAERIVDDMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVQ
Ga0334995_0452739_609_785	3300034062	Freshwater	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDED
Ga0310130_0089206_409_621	3300034073	Fracking Water	MALTSQQLNQLVENYAERIVDEMDTKCLMQFVYDTICENMYHMGEEDVMNEIANVYDEDVIQELVESVTV
Ga0335020_0054537_1414_1641	3300034082	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDDDVIQELVESVTVE
Ga0335029_0009259_6749_6964	3300034102	Freshwater	MTLTSQQLDQLVENYAERIVDEMDVKCLIQFAYDTIVENLSHLNEEDVLNEISYVYDEDVIQELVESVTVE
Ga0335029_0549629_462_659	3300034102	Freshwater	QLDQLVENYAERIVDEMDTKCLMQFVYDTLVESLAGKSEEDVLGEIAYVYDEDVVEELIESVTVQ
Ga0335030_0270288_528_755	3300034103	Freshwater	MSSEMTLTSQQLDQLIDNYAERIVDEMDTKCLMQFVFDTIVENLSHLNEEDVLNEIANVYDEDVIQELVESVTVE
Ga0335068_0406489_297_512	3300034116	Freshwater	MTLTSQQLDQLVENYAERIVDEMDTKCLIQFAYDTIVENLSHLNEEDVLNEIANVYDEDVIQELIESVTVE
Ga0335013_0270762_36_209	3300034284	Freshwater	MNLTSQQLNQLVENYAERIVDEMDVKCLVQFAYDTIVENMSNMGPEDVLNEIAGVYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071172

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences