Metagenome / Metatranscriptome Family F071153

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071153
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	117 residues
Representative Sequence	MFSGKFIKKNGKLTYATPQDKLAYEIFVDKIPEGQKVDMYLDLANSDHSSAQLAKVHVCIRELAKESGYTFDEMKSIIKDSAGLADKSFAECSKDELMLAIEACIQIGRENYNINLG
Number of Associated Samples	96
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.21 %
% of genes near scaffold ends (potentially truncated)	27.87 %
% of genes from short scaffolds (< 2000 bps)	50.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (72.951 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (22.131 % of family members)
Environment Ontology (ENVO)	Unclassified (48.361 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.21% β-sheet: 5.52% Coil/Unstructured: 48.28%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03167	UDG	22.13
PF03796	DnaB_C	9.84
PF13479	AAA_24	8.20
PF01503	PRA-PH	2.46
PF02617	ClpS	1.64
PF04851	ResIII	1.64
PF03054	tRNA_Me_trans	0.82
PF07460	NUMOD3	0.82
PF13155	Toprim_2	0.82
PF01832	Glucosaminidase	0.82
PF13203	DUF2201_N	0.82
PF12728	HTH_17	0.82
PF01661	Macro	0.82
PF07453	NUMOD1	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	22.13
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	22.13
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	22.13
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	9.84
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	9.84
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	1.64
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.82
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.41 %
Unclassified	root	N/A	24.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.95 %
Unclassified	root	N/A	24.59 %
Viruses	superkingdom	All Organisms → Viruses	2.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.95 %
Unclassified	root	N/A	24.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	19.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	19.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.82 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	19.67 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	13.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	19.67 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	13.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	19.67 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	13.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.59 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	19.67 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	13.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000929\|NpDRAFT_10248790	Not Available	1041	Open in IMG/M
3300002305\|B570J29619_1000153	All Organisms → cellular organisms → Bacteria	7539	Open in IMG/M
3300002835\|B570J40625_100000084	All Organisms → cellular organisms → Bacteria	120453	Open in IMG/M
3300002835\|B570J40625_100000187	All Organisms → cellular organisms → Bacteria	96062	Open in IMG/M
3300002835\|B570J40625_100020465	All Organisms → cellular organisms → Bacteria	11181	Open in IMG/M
3300006641\|Ga0075471_10184987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1090	Open in IMG/M
3300006917\|Ga0075472_10501790	Not Available	604	Open in IMG/M
3300007216\|Ga0103961_1269457	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300007346\|Ga0070753_1366183	Not Available	506	Open in IMG/M
3300007516\|Ga0105050_10004332	All Organisms → cellular organisms → Bacteria	18938	Open in IMG/M
3300008107\|Ga0114340_1003306	Not Available	9063	Open in IMG/M
3300008107\|Ga0114340_1123198	Not Available	999	Open in IMG/M
3300008110\|Ga0114343_1005093	All Organisms → cellular organisms → Bacteria	9512	Open in IMG/M
3300008261\|Ga0114336_1000485	All Organisms → cellular organisms → Bacteria	84452	Open in IMG/M
3300008266\|Ga0114363_1016432	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3337	Open in IMG/M
3300008267\|Ga0114364_1003384	Not Available	8714	Open in IMG/M
3300008267\|Ga0114364_1129091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1664	Open in IMG/M
3300008448\|Ga0114876_1001746	All Organisms → cellular organisms → Bacteria	15778	Open in IMG/M
3300008448\|Ga0114876_1088198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1268	Open in IMG/M
3300009085\|Ga0105103_10049219	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2126	Open in IMG/M
3300009151\|Ga0114962_10000024	Not Available	119765	Open in IMG/M
3300009160\|Ga0114981_10630699	Not Available	569	Open in IMG/M
3300009165\|Ga0105102_10451404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	691	Open in IMG/M
3300009168\|Ga0105104_10374774	Not Available	789	Open in IMG/M
3300009181\|Ga0114969_10000298	All Organisms → cellular organisms → Bacteria	41954	Open in IMG/M
3300009183\|Ga0114974_10053459	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2700	Open in IMG/M
3300010160\|Ga0114967_10355071	Not Available	740	Open in IMG/M
3300010354\|Ga0129333_10030524	Not Available	5092	Open in IMG/M
3300010354\|Ga0129333_10349809	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1315	Open in IMG/M
3300010354\|Ga0129333_10445027	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1142	Open in IMG/M
3300010370\|Ga0129336_10024873	All Organisms → cellular organisms → Bacteria	3629	Open in IMG/M
3300010885\|Ga0133913_10088447	All Organisms → cellular organisms → Bacteria	8303	Open in IMG/M
3300010885\|Ga0133913_12769608	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300011984\|Ga0119931_1012461	Not Available	940	Open in IMG/M
3300011995\|Ga0153800_1007192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1065	Open in IMG/M
3300012012\|Ga0153799_1055377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	726	Open in IMG/M
3300012013\|Ga0153805_1006328	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2071	Open in IMG/M
3300012013\|Ga0153805_1021465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1100	Open in IMG/M
3300012667\|Ga0157208_10002584	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3446	Open in IMG/M
3300013004\|Ga0164293_10608847	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10015694	All Organisms → cellular organisms → Bacteria	7539	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10085945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2269	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10039106	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	4337	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10081929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2533	Open in IMG/M
3300013372\|Ga0177922_11248663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	848	Open in IMG/M
3300014257\|Ga0075319_1091785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	604	Open in IMG/M
3300017700\|Ga0181339_1032602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	570	Open in IMG/M
3300017707\|Ga0181363_1001192	All Organisms → cellular organisms → Bacteria	6341	Open in IMG/M
3300017716\|Ga0181350_1113641	Not Available	655	Open in IMG/M
3300017747\|Ga0181352_1000433	All Organisms → cellular organisms → Bacteria	18121	Open in IMG/M
3300017747\|Ga0181352_1095721	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300017754\|Ga0181344_1002090	All Organisms → cellular organisms → Bacteria	7138	Open in IMG/M
3300017754\|Ga0181344_1002307	All Organisms → cellular organisms → Bacteria	6782	Open in IMG/M
3300017766\|Ga0181343_1006671	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3891	Open in IMG/M
3300018426\|Ga0181566_10114226	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2049	Open in IMG/M
3300020151\|Ga0211736_10221107	All Organisms → cellular organisms → Bacteria	15243	Open in IMG/M
3300020179\|Ga0194134_10009769	All Organisms → cellular organisms → Bacteria	7729	Open in IMG/M
3300020513\|Ga0208090_1000903	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	5480	Open in IMG/M
3300020537\|Ga0208722_1000050	All Organisms → cellular organisms → Bacteria	29144	Open in IMG/M
3300020542\|Ga0208857_1030583	Not Available	865	Open in IMG/M
3300020556\|Ga0208486_1001932	Not Available	3763	Open in IMG/M
3300021079\|Ga0194055_10000938	All Organisms → cellular organisms → Bacteria	23666	Open in IMG/M
3300021340\|Ga0194041_10194601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	619	Open in IMG/M
3300021379\|Ga0213864_10033243	All Organisms → Viruses → Predicted Viral	2413	Open in IMG/M
3300021962\|Ga0222713_10004501	All Organisms → cellular organisms → Bacteria	13956	Open in IMG/M
3300022179\|Ga0181353_1002200	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	4175	Open in IMG/M
3300022179\|Ga0181353_1016087	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1940	Open in IMG/M
3300023184\|Ga0214919_10007271	All Organisms → cellular organisms → Bacteria	14983	Open in IMG/M
3300023184\|Ga0214919_10079710	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300024289\|Ga0255147_1082063	Not Available	602	Open in IMG/M
3300024481\|Ga0256330_1068655	Not Available	752	Open in IMG/M
(restricted) 3300024517\|Ga0255049_10333105	Not Available	698	Open in IMG/M
3300024562\|Ga0256336_1073832	Not Available	733	Open in IMG/M
3300024866\|Ga0255272_1041297	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1171	Open in IMG/M
3300024866\|Ga0255272_1068932	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300027139\|Ga0255082_1054419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	624	Open in IMG/M
3300027721\|Ga0209492_1157944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	789	Open in IMG/M
3300027721\|Ga0209492_1160690	Not Available	782	Open in IMG/M
3300027743\|Ga0209593_10277641	Not Available	578	Open in IMG/M
3300027749\|Ga0209084_1001188	All Organisms → cellular organisms → Bacteria	22510	Open in IMG/M
3300027754\|Ga0209596_1024243	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3555	Open in IMG/M
3300027764\|Ga0209134_10060270	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1270	Open in IMG/M
3300027777\|Ga0209829_10007550	All Organisms → cellular organisms → Bacteria	7159	Open in IMG/M
3300027899\|Ga0209668_10065376	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2011	Open in IMG/M
3300027917\|Ga0209536_101228969	Not Available	918	Open in IMG/M
3300027917\|Ga0209536_102042801	Not Available	686	Open in IMG/M
(restricted) 3300027970\|Ga0247837_1130191	Not Available	1159	Open in IMG/M
3300027976\|Ga0209702_10002159	All Organisms → cellular organisms → Bacteria	35289	Open in IMG/M
3300028025\|Ga0247723_1083446	Not Available	836	Open in IMG/M
3300031565\|Ga0307379_10255879	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1754	Open in IMG/M
3300031746\|Ga0315293_10012040	All Organisms → cellular organisms → Bacteria	7889	Open in IMG/M
3300031746\|Ga0315293_10060391	All Organisms → Viruses → Predicted Viral	3271	Open in IMG/M
3300031746\|Ga0315293_10082032	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2757	Open in IMG/M
3300031746\|Ga0315293_10137636	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2047	Open in IMG/M
3300031786\|Ga0315908_10283913	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300031787\|Ga0315900_10769369	Not Available	669	Open in IMG/M
3300031857\|Ga0315909_10000888	All Organisms → cellular organisms → Bacteria	39940	Open in IMG/M
3300031857\|Ga0315909_10021176	All Organisms → cellular organisms → Bacteria	6535	Open in IMG/M
3300031951\|Ga0315904_10403144	Not Available	1239	Open in IMG/M
3300031951\|Ga0315904_10834104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	754	Open in IMG/M
3300032050\|Ga0315906_10384041	Not Available	1230	Open in IMG/M
3300032053\|Ga0315284_11092228	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300032093\|Ga0315902_10210764	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1937	Open in IMG/M
3300033816\|Ga0334980_0001883	All Organisms → cellular organisms → Bacteria	9620	Open in IMG/M
3300033981\|Ga0334982_0050652	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2296	Open in IMG/M
3300033992\|Ga0334992_0000707	All Organisms → cellular organisms → Bacteria	27011	Open in IMG/M
3300033993\|Ga0334994_0461471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	599	Open in IMG/M
3300033994\|Ga0334996_0424526	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300033995\|Ga0335003_0000610	All Organisms → cellular organisms → Bacteria	17241	Open in IMG/M
3300034018\|Ga0334985_0009976	All Organisms → cellular organisms → Bacteria	7531	Open in IMG/M
3300034019\|Ga0334998_0258083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1053	Open in IMG/M
3300034061\|Ga0334987_0000026	All Organisms → cellular organisms → Bacteria	122643	Open in IMG/M
3300034062\|Ga0334995_0241589	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1223	Open in IMG/M
3300034063\|Ga0335000_0408462	Not Available	806	Open in IMG/M
3300034066\|Ga0335019_0782647	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300034082\|Ga0335020_0042820	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2419	Open in IMG/M
3300034104\|Ga0335031_0001040	All Organisms → cellular organisms → Bacteria	21264	Open in IMG/M
3300034104\|Ga0335031_0521536	Not Available	718	Open in IMG/M
3300034108\|Ga0335050_0269732	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300034116\|Ga0335068_0009754	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	6120	Open in IMG/M
3300034116\|Ga0335068_0101964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1607	Open in IMG/M
3300034116\|Ga0335068_0300769	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.54%
Terrestrial	Environmental → Terrestrial	2.46%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.07%
Marine	Environmental → Aquatic → Marine	11.48%
Soil	Environmental → Terrestrial → Soil	1.64%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	48.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.39%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.56%
Coastal	Environmental → Aquatic → Marine → Coastal	6.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.92%
River	Environmental → Aquatic → Freshwater → River	4.92%
Ice	Environmental → Aquatic → Freshwater → Ice	3.28%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.64%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.82%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.82%
Inlet	Environmental → Aquatic → Marine → Inlet	0.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.82%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Clay	Environmental → Terrestrial → Soil → Clay	0.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.26%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.84%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.56%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.10%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.64%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.64%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.13%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.20%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.74%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.92%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.10%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.28%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.28%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.46%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.64%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	1.64%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.64%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.64%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.82%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.82%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	0.82%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.82%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.82%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.82%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.82%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002305	Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011984	Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014257	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020513	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020537	Freshwater microbial communities from Lake Mendota, WI - 21SEP2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020542	Freshwater microbial communities from Lake Mendota, WI - 05NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020556	Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024517 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3	Environmental	Open in IMG/M
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024866	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027139	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027970 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5m	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_102487902	3300000929	Freshwater And Marine	MFSGKFIKTNGKLVYAHPKDKLAYEIFLEKIPEGQKIEMYLDLADADHTKAQLAKVHACIREMAKESGYTFDEMKCVIKDASGIAXXXSKDELMLAIEACIQIGRENWNINLT*
B570J29619_100015310	3300002305	Freshwater	MFSGKFIKKEGKLVYSRIQDKLAYEIFVEGLSENQEIEMFLDLTAHDHTKAQLAKVHACIRELAKESGYTFEEMKLVIKEQSGLTGKSFGECSKSDLMLAIEACIQIGKDQFNINL*
B570J40625_10000008494	3300002835	Freshwater	MFSGKFIKKEGKLVYSRIQDKLAYEIFVEGLSENQEIEMFLDLIAHDHTKAQLAKVHACIRELAKESGYTFEEMKLVIKEQSGLTGKSFGECSKSDLMLAIEACIQIGKDQFNINL*
B570J40625_10000018758	3300002835	Freshwater	MYTGKLVKKDGKLTYAHPKDKLAYEIFVGKLSEGQEIEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSKDQLMLAIEACIEVGVELNVNLQ*
B570J40625_10002046516	3300002835	Freshwater	MFSGKFIKKDGKLIFAHPQDKLAYEIFLQKIPDGQKVDMYLDLIGIDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLSYKDGAMINYKSFGDCSKDELMLAIEACIQIGREQFNLNLG*
Ga0075471_101849873	3300006641	Aqueous	MYTGKLIKKEGKLTYAHPKDKLAYELFLQKLPEGQKVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLQ*
Ga0075472_105017901	3300006917	Aqueous	MFTGRFIKKNGKLVFNSPQDRLSYEIFVDKIKEGQVVEMYIDLVGADHSKAQLAKVHACIREIAKESGYTFDEVKGIVKDASGLSGKSFADCSRDDLMLAI
Ga0103961_12694573	3300007216	Freshwater Lake	MLSVKLVKKDGKLTYPDDKSKLAYQIFLDKLQEGQRVEMYIGLADADHSIAQLAKVHACIRELAKESGYTFEEMKVLIKERSGLCYDAGDATLCKSFAECSKDELALAIEACIEIGRVNFNINLQ*
Ga0070753_13661832	3300007346	Aqueous	MYNGKLTKKDGKLVFTSPQDKLAYNIFIDKLSEGDSVEMYVEISNPDHSKAQLAKVHACIRELAKESGYSFDDMKDIVKEYAGLTGKSFAECSKSDLMLAIEACIEIGRENYNINL*
Ga0105050_1000433225	3300007516	Freshwater	MFNGKLIKKNGKLTYLETKDKLVYEKFELSLKEDQIVDMYLDLINITHSKAQLAKVHACIRELANESGYTFEEMKIAIKLESGLYKDNNGHRECKSFIECSKEELMLAINTCIQIGKDNYNLSL*
Ga0114340_10033068	3300008107	Freshwater, Plankton	MFSGKLVKKDGKLTYAGPQDKLAYDIFISKLEEGQAVEMYIDLTSTDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLAYKEGLMITYKSFGDCSKDELMLAIEACIQIGREQFNLNLG*
Ga0114340_11231983	3300008107	Freshwater, Plankton	MFTGRFIKKNGKLVFSSPQDKLSYEIFVDKIKEGQVVEMYIDLAGADHSKAQLAKVHACIREIAKESGYTFDEVKGIIKDASGLTGKSFADCSRDDL
Ga0114343_100509313	3300008110	Freshwater, Plankton	MYTGKLVKKEGKLTYAHPKDKLAYELFLQKLSEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLS*
Ga0114336_100048564	3300008261	Freshwater, Plankton	MYTGRLVKKEGKLTYAHPKDKLAYELFLQKLSEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLQ*
Ga0114363_10164325	3300008266	Freshwater, Plankton	MFSGKFIKKNGKLTYATPKDKLAYEIFVDMISEGEVIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKLIIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG*
Ga0114364_100338412	3300008267	Freshwater, Plankton	LLGMHTGKFIKKNGKLTFASPQDKLAYEIFVDKLKEGEKVDMFIEVYSTDHSKAQLAKVHACIRELAKESGYTFDEMKLVIKEHAGLAGKSFGECSKSDIMLAIEACIQIGRENYNINLA
Ga0114364_11290917	3300008267	Freshwater, Plankton	MYTGKLVKKEGKLTYAHPKDKLAYDLFVQKLSEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQL
Ga0114876_100174611	3300008448	Freshwater Lake	MVTVKLVKKNGKLGYIDNKAKLKYEIFIDKIKDGQIIDMYLDIADADHSLAQLAKVHACIRLLAKESGYTFEEMKTLVKKHSGLCYIVDGMEECKSFKDCSKDELVLAIEACIEIGRELNVNLE*
Ga0114876_10881983	3300008448	Freshwater Lake	MYTGKLVKKEGKLTYAHPKDKLAYELFVQKLSEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLQ*
Ga0105103_100492195	3300009085	Freshwater Sediment	MFNGTFIKKKNKLTYLNPKDKLAYEIFLEKLQEGQIVEMYIDLADVDHSKAQLAKVHACIRELAKESGYTFDEMKLAIKEHAGLAGKSFGDCSKSDLMLAIESCIQIGRENYNINLG*
Ga0114962_1000002429	3300009151	Freshwater Lake	MYTGKLVKKEGKLTYSNPKDKLAYELFLQKIPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKKRSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLQ*
Ga0114981_106306991	3300009160	Freshwater Lake	MFSGKFIKKNGKLTYATPQDKLAYEIFVDKIQEEQIVDMYLDLASADHSKAQLAKVHACIRELAKESGYTFGEMKVVVKEASGLEGKSFAECSKEDI
Ga0105102_104514042	3300009165	Freshwater Sediment	MFSGKFIKKDGKITYASPQDKLAYEIFVDKIQEGQKVEMYIGLANTDHSIAQLAKVHACIRELAKESGYSFDEMKVLIKEKSGLCYDGGDAILCKSFSDCSKDEIALAIEACIEIGRENYNINLT*
Ga0105104_103747742	3300009168	Freshwater Sediment	MFTGKFIKKDGKLTYADPKDKLAYDIFISKLEEGQIIDMYLDLASVDHSKAQLAKVHACIRELAKESGYSFDDMKLLIKQNAGLEGKSFAECSKEQIALAIESCIQIGRENFNLSLG*
Ga0114969_1000029832	3300009181	Freshwater Lake	MYTGKLVKKDGKLTYAHPKDKLAYEIFVGKLSEGQEIEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSKDQLMLAIEACIEIGVELNVNLQ*
Ga0114974_100534591	3300009183	Freshwater Lake	MFTGKLIKKDGKLTYSHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIQACIEIGVELNVNLQ*
Ga0114967_103550711	3300010160	Freshwater Lake	MFSGKFIKTNGKLVYAHPKDKLAYEIFLEKIPEGQKIEMYLDLADADHTKAQLAKVHACIREMAKESGYTFDEMKCVIKDASGIADKSFADCSKDELMLAIEAC
Ga0129333_100305242	3300010354	Freshwater To Marine Saline Gradient	MFSGKLIKKNGKLSYASPQDKLAYELFIDKLSEGQIVEMYIDLANTDHSKAQLAKVHACIRELAKESGYTFEEMKIVIKQAAGLCYEKDGLVECKSFAECSKDELMLAIEACIQIGKENYNISLG*
Ga0129333_103498093	3300010354	Freshwater To Marine Saline Gradient	MFSGKFIKKNGKLIYATPQDKLAYEIFVDKLSEGQKVDMYFDLIGADHSKAQLAKVHACIRELAKEGGYTFDEMKALVKQQAGLCSDNNGVYECKSFAECTKDELMFAIEACIQIGRDYYNLNLG*
Ga0129333_104450271	3300010354	Freshwater To Marine Saline Gradient	LTYDTPKDKLAYEIFLQKLKEGQKIEMYLDLTNSTHSKAQLAKVHACIRKLAVESGYTFDDMKLLIKHNAGLEGKSFAECSSEELMLAIESCIQIGKENYNINLG*
Ga0129336_100248737	3300010370	Freshwater To Marine Saline Gradient	MFSGKFIKKNGKLIYATPQDALAYEIFVDKLSEGQKVDMYFDLIGADHSKAQLAKVHACIRELAKEGGYTFDEMKALVKQQAGLCSDNNGVYECKSFAECTKDELMFAIEACIQIGRDYYNLNLG*
Ga0133913_100884474	3300010885	Freshwater Lake	MFSGKFIKKNGKLTYATPQDKLAYEIFVDKIQEEQIVDMYLDLASADHSKAQLAKVHACIRELAKESGYTFDEMKVVVKEASGLEGKSFAECSKEDIMLAIEACIQIGRENYNINLA*
Ga0133913_127696084	3300010885	Freshwater Lake	MQSLKLIKKNGKLTYLEPKDKLAYKIFEDKIKEGQKIEMYLDLADTDHSKAQLAKVHACIRELAKESGYTFEEMKEIIKIRSGIDDKSFTLCSKDELML
Ga0119931_10124611	3300011984	Drinking Water Treatment Plant	MFTGRFIKKNGKLIFNSLQDKLSYEIFVDKIKEGRVVEMYIDLVGADHSKAQLAKVHACIREIAKESGYTFDEVKVIVKDASGLSGKSFADCSRDELMLAIESC
Ga0153800_10071923	3300011995	Freshwater	MFSGKFIIKNGKLIYATPQDKLAYKIYLDKLSEGQKIEMYLDFADGNHSKAQLAKVHVCIRELAKESGYTFEEMKNIIKESTGLEDKSFAECSKDELMLAIEACIQIGRDNYNINL*
Ga0153799_10553771	3300012012	Freshwater	MYTGKLIKKDGKLTYGHPKDKLAYELFLQKLQEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEVGVELNVNLQ*
Ga0153805_10063281	3300012013	Surface Ice	PQDKLAYKIYLDKLSEGQKIEMYLDFADGNHSKAQLAKVHVCIRELAKESGYTFEEMKNIIKESTGLEDKSFAECSKDELMLAIEACIQIGRDNYNINL*
Ga0153805_10214653	3300012013	Surface Ice	MYTGKLVKKDGKLTYGHPKDKLAYELFLQKLQEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSKDQLMLTIQACIEIGVELNVNLQ*
Ga0157208_100025845	3300012667	Freshwater	MYNGKFIKKNGKLTYNNPKDQLAYEIFVDKIEEGQIVEMYIDLANNDHSKGQLAKVHACIRELSKESGYTFNEMKDIVKEQSGLCSKTEDGSIFCKSFSDCSKDELMLSIETCIEIGRDNYNINLG*
Ga0164293_106088473	3300013004	Freshwater	MQTLKLIKKNGKLTYLEPKDKLAYEIFEDKIKEGQKVDMYLDLADADHSKAQLAKVHACIRELAKESGYTFEEMKEIIKIRSGIDDKSFADCSKDE
(restricted) Ga0172367_100156946	3300013126	Freshwater	MFSGRFIKKNGKLVFNSPKDKLSYEIFVDKIKEGQVVEMYIDLVGTDHSKAQLAKVHACIREIAKESGYTFDEVKGIVKDASGLTGKSFANCSKDDLMLAIESCVQIGREQFNLNLG*
(restricted) Ga0172367_100859457	3300013126	Freshwater	MYTGRLIKKDGKLTYAHPKDKLAYELFVEKLLEGQEVELYVDLANADHSRAQINKVHACIRELAKESGYTFEEMKRIVKQRSGLCYTDSEGEESCKSFAECSSDELMMAIQAAIEIGTDLNVNLQ*
(restricted) Ga0172373_100391066	3300013131	Freshwater	MYTGKLVKKEGKLTYAHPKDKLAYELFVEKLSEGQEVEMYIDLANANHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEESCRSFAECTKDQLMLAIEACIEIGVELNVNLQ*
(restricted) Ga0172373_100819294	3300013131	Freshwater	MYTGRLIKKDGKLTYAHPKDKLAYELFVEKLPEGQEVELYVDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKQRSGLCYTDSEGEESCKSFAECSSDELMMAIQAAIEIGTDLNVNLQ*
Ga0177922_112486632	3300013372	Freshwater	MYTGKLIKKDGKLTYSNPKDKLAYELFLQKLQEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLQ*
Ga0075319_10917851	3300014257	Natural And Restored Wetlands	MFSGKFIKKNGKLIYATPQDKLAYEIFVDKLSEGQKVDMYFDLVGVDHSKAQLAKVLACIRELAKEGGYTFDEMKALVKQQAGLCSDNNGVYECKSFAECTKDELMFAIEACIQIGRDYYNLNLG*
Ga0181339_10326022	3300017700	Freshwater Lake	MYTGKLIKKDGKLTYGHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQIMLAIEACI
Ga0181363_10011927	3300017707	Freshwater Lake	MFSGKFIKKNGKLTYATPQDKLAYEIFVDMISEGEVIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKQIIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG
Ga0181350_11136411	3300017716	Freshwater Lake	MYTGKLIKKDGKLIYHEPTDKLGYAVFVSKIKDGQVVDMYLDLADADHSKAQLAKVHACIRELATESGYSFDDMKLLIKNASGLGDKSFADCSKSELMLAI
Ga0181352_100043315	3300017747	Freshwater Lake	MFSGKLVKKDGKLTYATPQDKLAYDIFISKLEEGQIVEMYVDLANADHSKAQLAKVHACIRELAKESGYTFDEMKDAVKEASGLGGKSFGECSREDLMLAIEAAIEIGEKNFNLNLR
Ga0181352_10957213	3300017747	Freshwater Lake	MVSIKLIKKNGKLTYADAQSKLAYEIFASKVKEGQKAEMYIDLAGADHSAAQLAKVHACIRELAKESGYTFEEMKALVKEHSGIGGKSFADASKDDLMLAIEACIEIGRELNINLQ
Ga0181344_100209011	3300017754	Freshwater Lake	MVTVKLIKKNGKLTYEHPKDKVAYQIFSDKIKEGQKVEMYINLADTDHSLAQLAKVHACIRELAKESGYTFEEMKTIIKKQSGLCYMIDGMEECKSFKDCSKDEIALAIEACIEIGRDLNVNLA
Ga0181344_10023072	3300017754	Freshwater Lake	MFSGKFVKKNGKLTYASPQDKLAYEIFVEKIPEGQKVDMYLDLANADHSKAQLAKVHACIREMSKESGYTFDEMKDIIKNASGLEGKSFAECSKDELMLAIEACIQLGKENYNINLG
Ga0181343_10066715	3300017766	Freshwater Lake	MFSGKFIKKNGKLTYATPKDKLAYEIFVDMISEGEVIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKQVIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG
Ga0181566_101142263	3300018426	Salt Marsh	MFSGKFVKKDGKLVFDSPQDKLAYEIFLDKIPEGQKVEMYLDLASGDKSAAQLAKVHACIRELAKEAGNTFDEMKKIVKKQSGLNDKSFTDCSKHELMLAIEACIDLGETYFNLNLR
Ga0211736_1022110717	3300020151	Freshwater	MYTGKLIKKDGKLTYAHPKDKLAYELFLQKLQEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLQ
Ga0194134_1000976910	3300020179	Freshwater Lake	MFSGKFIKKNGKLVFAHPQDKLAYELFLEKIPEGQQIDMYLDLTGVDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLAYKEGVIINYKSFGDCNKDELMLAIEACIQIGKEQFNLSLG
Ga0208090_10009036	3300020513	Freshwater	MFSGKFIKKEGKLVYSRIQDKLAYEIFVEGLSENQEIEMFLDLTAHDHTKAQLAKVHACIRELAKESGYTFEEMKLVIKEQSGLTGKSFGECSKSDLMLAIEACIQIGKDQFNINL
Ga0208722_100005034	3300020537	Freshwater	MFSGKFIKKEGKLVYSRIQDKLAYEIFVEGLSENQEIEMFLDLIAHDHTKAQLAKVHACIRELAKESGYTFEEMKLVIKEQSGLTGKSFGECSKSDLMLAIEACIQIGKDQFNINL
Ga0208857_10305831	3300020542	Freshwater	MFSGKFIKKDGKLIFAHPQDKLAYEIFLQKIPDGQKVDMYLDLIGIDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLSYKDGAMINYKSFGDCS
Ga0208486_10019322	3300020556	Freshwater	MFSGKFIKKDGKLIFAHPQDKLAYEIFLQKIPDGQKVDMYLDLIGIDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLSYKDGAMINYKSFGDCSKDELMLAIEACIQIGREQFNLNLG
Ga0194055_1000093817	3300021079	Anoxic Zone Freshwater	MYTGKLVKKEGKLTYSNPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLQ
Ga0194041_101946011	3300021340	Anoxic Zone Freshwater	YTGKLVKKDGKLTYSNPKDKLAYELFLQKIPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLR
Ga0213864_100332439	3300021379	Seawater	MFSGKFIKKDGKLVYDSPQDKLAYEIFLDKIPEGQKVEMFLDLTSGDKTAAQLAKVHACIRELAKEAGNTFEEMKKIIKTEAGLGDKSFADCSKN
Ga0222713_100045016	3300021962	Estuarine Water	MVTVKLIKKNGKLTYEHPKDKVAYQIFSDKIKEGQKVEMYINIADSDHSLAQLAKVHACIRELAKESGYTFEEMKTLVKKHSGLCYIIDGMEECKSFKDCSKDEIALAIEACIEIGKDLNINLA
Ga0181353_10022003	3300022179	Freshwater Lake	MYTGKLIKKEGKLTYAHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLQ
Ga0181353_10160874	3300022179	Freshwater Lake	MFSGKFIKKNGKLTYATPQDKLAYEIFVDMISEGEVIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKQVIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG
Ga0214919_1000727131	3300023184	Freshwater	MYTGKLVKKDGKLTYSNPKDKLAYELFLQKIPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLR
Ga0214919_100797103	3300023184	Freshwater	MVSIKLIKKNGKLIFVDNKEKLAYQIFLDKIKEGQKLEMYIDLADADHSKAQLAKVHACIRELAKESGYTFEEMKALVKESSGLGNKSFADASKDDLMLAIEACIEIGKELNVNLQ
Ga0255147_10820631	3300024289	Freshwater	KNGKLTYATPQDKLAYEIFVDKIPEGQKVDMYLDLANSDHSSAQLAKVHVCIRELAKESGYTFDEMKSIIKDSVGLADKSFAECSKDELMLAIEACIQIGRENYNINLG
Ga0256330_10686551	3300024481	Freshwater	LTYATPQDKLAYEIFVDKIPEGQKVDMYLDLANSDHSSAQLAKVHVCIRELAKESGYTFDEMKSIIKDSAGLADKSFAECSKDELMLAIEACIQIGRENYNINLG
(restricted) Ga0255049_103331051	3300024517	Seawater	MFSGRFVKTNGKLIYAHPKDKLAYELFVDKIPEGQKIEMYLDLADADHSKAQLAKVHACIREIAKEAGYTFDEMKNLIKDASGIADKSFADCSKDELM
Ga0256336_10738322	3300024562	Freshwater	MFSGKFIKKNGKLTYATPQDKLAYEIFVDKIPEGQKVDMYLDLANSDHSSAQLAKVHVCIRELAKESGYTFDEMKSIIKDSAGLADKSFAECSKDELMLAIEACIQIGRENYNINLG
Ga0255272_10412971	3300024866	Freshwater	QDKLAYEIFVDKIPEGQKVDMYLDLANSDHSSAQLAKVHVCIRELAKESGYTFDEMKSIIKDSAGLADKSFAECSKDELMLAIEACIQIGRENYNINLG
Ga0255272_10689322	3300024866	Freshwater	MFSGKFIKKDGKLVFAHPQDKLAYEIFLEKIPEGQKVDMYLDLANTDHSKAQLAKVHACIRELAKESGYTFEEMKLVVKQASGLEGKSFANCSKDELMLAIESCIQIGREQFNLSLG
Ga0255082_10544192	3300027139	Freshwater	MHTGKFIKKDGKLVFAHPQDKLAYEIFVEKLKEGDKVDMFIEVSNPDHSKAQLAKVHACIRELAKESGYTFDEMKLIVKQTSGIEDKSFADCSKDELMLAIEGC
Ga0209492_11579441	3300027721	Freshwater Sediment	MFSGKLIKKDGKLVYSNPQNKLAYELFIQKLSEGQEVDIYIDLANADHSRAQINKVHACIRELAKESGYTFEAMKLLVKEQAGLCYEAEGQLECKSFGDCSKDELLLAIESCI
Ga0209492_11606901	3300027721	Freshwater Sediment	MFSGKFIKKDGKLTYASPQDKLAYDMFLSKLEDGQIVDMYIDLASADHSKAQLAKVHACIRELAKESGYTFDEMKIVVKQASGLEDKSFADCSKDELM
Ga0209593_102776411	3300027743	Freshwater Sediment	PKDKLAYDIFISKLEEGQIIDMYLDLASVDHSKAQLAKVHACIRELAKESGYSFDDMKLLIKQNAGLEGKSFAECSKEQIALAIESCIQIGRENFNLSLG
Ga0209084_100118822	3300027749	Freshwater Lake	MYTGKLVKKEGKLTYSNPKDKLAYELFLQKIPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKKRSGLCYTDSEGEFCKSFAECTKDQLMLTIQACIEIGVELNVNLQ
Ga0209596_10242432	3300027754	Freshwater Lake	MYTGKLVKKDGKLTYAHPKDKLAYEIFVGKLSEGQEIEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSKDQLMLAIEACIEIGVELNVNLQ
Ga0209134_100602701	3300027764	Freshwater Lake	TPKEKLAYEIFMEKLEEGQVVEMYIDLANTDHSKAQLAKVHACIRELAKESGYTFDEMKCLVKDQAGLSFKEGLMIEYKSFGDCSKDELMLAIEACIQIGRENYNTNLG
Ga0209829_100075504	3300027777	Freshwater Lake	MQSLKLIKKNGKLTYLEPKDKLAYKIFEDKIKEGQKIEMYLDLADTDHSKAQLAKVHACIRELAKESGYTFEEMKEIIKIRSGIDDKSFTLCSKDELMLAIECCIQIGLDNYNLSLG
Ga0209668_100653764	3300027899	Freshwater Lake Sediment	MFTGKFIKKNGRLTYASPQDKLAYEIFVEKIQEGDVIDMFLDVANPDHSKAQLAKVHACIRELAKESGYTFDEMKSVIKEHAGLAGKSFGECSKSDIMLAIEACIQIGRENYNINLA
Ga0209536_1012289691	3300027917	Marine Sediment	MFSGKFIKKDGKLVYDSPRDKLAYEIFLDKIPEGQKVEMFLDLTSGDKTAAQLAKVHACIRELAKEAGNTFEEMKKIIKTEAGLGDKSFADCSKNELMLAIEEGYKPASTPFYEGNPNLRKGNIVFNYTEEYK
Ga0209536_1020428012	3300027917	Marine Sediment	MFSGKFIKKNGKLTYATPKDKLAYEIFIDMISEGEIIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKQVIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG
(restricted) Ga0247837_11301913	3300027970	Freshwater	MSIKLIKKDGKLTYLDEKSKLAYMIYADKLSEGQLVDMYLDLADADHSKAQLAKVHACIRELAKESGYTFDEMKLVIKQASGLGEKSFADSSKDELMLAIEACIQIGRENYNLNLA
Ga0209702_1000215930	3300027976	Freshwater	MFNGKLIKKNGKLTYLETKDKLVYEKFELSLKEDQIVDMYLDLINITHSKAQLAKVHACIRELANESGYTFEEMKIAIKLESGLYKDNNGHRECKSFIECSKEELMLAINTCIQIGKDNYNLSL
Ga0247723_10834463	3300028025	Deep Subsurface Sediment	MYNGRLIKKEGKLTYLEPKDQLAYKIFISKLEEGQVVDMYIDLADADHSKAQLAKVHACIRELAKESGYTFDDMKLIIKGASGLCYDAEHCKSFAECSSTELGLAIE
Ga0307379_102558793	3300031565	Soil	MYIGKYIKKDGKIKHNSLEDKTKYDIFLNKISEGQVLDMYIDLANADHSKAQLAKVHACIREMAKESGYTFEEMKNVIKEYTGLEGKSFAECSKDDLTLAIEACIQIGRDNYNINLG
Ga0315293_100120405	3300031746	Sediment	MFSGKFIIKNGKLIYATPQDKLAYKIYLDKLSEGQKIEMYLDFADGDHSKAQLAKVHACIRELAKESGYTFEEMKNIIKESTGLEDKSFAECSKDELMLAIEACIQIGRDNYNINL
Ga0315293_100603914	3300031746	Sediment	MYIGKYIKKDGKIKHNSLEDKTKYDIFLSKISEGQILDIYIDLASADHSKAQLAKVHACIREIAKESGYTFEEMKNIIKESTGLEDKSFAECSKDELMLAIEACIQIGRDQFNINLG
Ga0315293_100820325	3300031746	Sediment	MVSIKLIKKDGKLIFVDNKEKLAYQIFLDKIKEGQKLEMYIDLADADHSKAQLAKVHACIRELAKESGYTFEEMKALVKESSGLGNKSFADASKDDLMLAIEACIEIGKELNVNLQ
Ga0315293_101376364	3300031746	Sediment	MYTGKLIKKEGKLTYGHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSKDQLMLSIQACIEIGVELNVNLQ
Ga0315908_102839132	3300031786	Freshwater	MFSGKFIKKDGKLVFAQPQDKLSYEIFIEKIPEGQKVDMYLDLIGIDHSKAQLAKVHACIRELAKESGYTFDEMKCLVKDNAGLTYKEGLMINYKSFGDCSKDELMLAIEACIKIGKEQFNLSL
Ga0315900_107693691	3300031787	Freshwater	MFSGKFIKKDGKLIFAHPQDKLAYEIFLEKIPEGQKVDMYLDLIGVDHSKAQLAKVHACIRELAKESGYTFDEMKLVVKQASGLENKSFADCSKDDL
Ga0315909_1000088814	3300031857	Freshwater	MFSGKLVKKDGKLTYATPQDKLAYDIFISKLEEGQSVEMYIDLASTDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLAYKDGLMINYKSFGDCSKDELMLAIEACIQIGREQFNLNLG
Ga0315909_100211769	3300031857	Freshwater	MFSGKFIKKNGKLTYATPKDKLAYEIFVDMISEGEVIDMFLEVSSPDHSKAQLAKVHACIRELAKESGYTFDEMKLIIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGRENYNINLG
Ga0315904_104031442	3300031951	Freshwater	MHTGKFIKKNGKLTFASPQDKLAYEIFVDKLKEGEKVDMFIEVYSTDHSKAQLAKVHACIRELAKESGYTFDEMKLVIKEHAGLAGKSFGECSKSDIMLAIEACIQIGRENYNINLA
Ga0315904_108341041	3300031951	Freshwater	FAHPQDKLAYEIFLQKIPDGQKVDMYLDLIGIDHSKAQLAKVHACIRELAKESGYTFDEMKCLVKDNAGLTYKEGLMINYKSFGDCSKDELMLAIEACIKIGKEQFNLSL
Ga0315906_103840414	3300032050	Freshwater	LNPKDKLAYEIFLEKLQEGQIVEMYIDLADVDHSKAQLAKVHACIRELAKESGYTFDEMKLAIKEHAGLAGKSFGDCSKSDLMLAIESCIQIGRENYNINLG
Ga0315284_110922282	3300032053	Sediment	MYSGKLIKKDGKLTYPSPKDKLSYQIFVDRLAEGQLVEMYVDLADADHSKAQLAKVHACIRELAKESGYTFEEMKTIIKIEAGLCFETDGLTECKSFVDCSKDELMLAIEACLQIGRENYNINL
Ga0315902_102107644	3300032093	Freshwater	MFSGKFIKNKGKLTFANPKDKLAYEIFVDKIPDGQIVDMYIDLASADHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLSYKDGAMINYKSFGDCSKDELMLAIEACIQIGREQFNLNLG
Ga0334980_0001883_1273_1626	3300033816	Freshwater	MHTGKFIKKNGKLTFASPQDKLAYEIFVDKLKEGEKVDMFIEIYSTDHSKAQLAKVHACIRELAKESGYTFDEMKLVIKEHAGLTGKSFGECSKSDLMLAIEACIQIGKENYNINLG
Ga0334982_0050652_990_1367	3300033981	Freshwater	MYSGKLVKTDGKLVFSDEKTKLAYQIFMDKLSEGQKVEMYIGLADADHSIAQLAKVHACIRELAKESGYSFDEMKVLIKEKSGLCYDAGDAVLCKSFSECSKDEIALAIEACIQIGRDNYNINLA
Ga0334992_0000707_18863_19216	3300033992	Freshwater	MHTGKFIKKDGKLVFAHPQDKLAYEIFVEKLKEGDKVDMFIEVSNPDHSKAQLAKVHACIRELAKESGYTFEEMKLVVKEHAGLAGKSFGDCSKSDLMLAIEACIQIGSENYNINLH
Ga0334994_0461471_145_498	3300033993	Freshwater	MFSGKFIKKDGKLTYASPQDKLAYDMFLSKLEDGQIVDMYIDLASADHSKAQLAKVHACIRELAKESGYTFDEMKIVVKQASGLEDKSFAECSKEQIMLAIEACIQIGRENYNVNLG
Ga0334996_0424526_55_405	3300033994	Freshwater	MSIKLIKKDGKLTYLDEKSKLAYLIYADKLAEGQVVEMYLDFADADHSKAQLAKVHACIRELAKESGYTFEEMKDLIKDASGLKGKSFAEASKDNLMLAIEACIQIGRDTYNINLG
Ga0335003_0000610_4510_4860	3300033995	Freshwater	MLSGKFIKRNGKLTYATPQDKLAYEIFVDKLQEGDKVDMFVELHGPDHSKAQLAKVHACIRELAKESGYTFEEMKLVIKEQAGLAGKSFGECSKDDLMLAIEACLQIGRENYNINL
Ga0334985_0009976_4434_4811	3300034018	Freshwater	MFSGKFIKKDGKITYASPQDKLAYEIFVDKIQEGQKVEMYIGLANTDHSIAQLAKVHACIRELAKESGYSFDEMKVLIKEKSGLCYDGGDAILCKSFSDCSKDEIALAIEACIEIGRENYNINLT
Ga0334998_0258083_84_458	3300034019	Freshwater	MYTGKLVKKEGKLTYAHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLS
Ga0334987_0000026_1165_1542	3300034061	Freshwater	MFSGKFIKKDGKLTYASPQDKLAYEIFVDKIQEGQKVEMYIGLANADHSIAQLAKVHACIRELAKESGYSFDEMKVLIKEKSGLCYDGGDAILCKSFSDCSKDEIALAIEACIQIGRENYNINLT
Ga0334995_0241589_3_398	3300034062	Freshwater	HAVFRSNEKYNLLDMFSGKFIKKDGKLTYASPQDKLAYDMFLSKLEDGQIVDMYIDLASADHSKAQLAKVHACIRELAKESGYTFDEMKIVVKQASGLEDKSFAECSKEQIMLAIEACIQIGRENYNVNLG
Ga0335000_0408462_136_489	3300034063	Freshwater	MHTGKFIKKNGKLTFASPQDKLAYEIFVEKLKEGEKVDMFIEIYSTDHSKAQLAKVHACIRELAKESGYTFDEMKLVIKEHAGLAGKSFGDCSKSDLMLAIEACIQIGSENYNINLH
Ga0335019_0782647_2_355	3300034066	Freshwater	MHTGKFIKKDGKLVFVHPQDKLAYEIFVEKLKEGDKVDMFIEVSNPDHSKAQLAKVHACIRELAKESGYTFEEMKLVVKEHAGLAGKSFGDCSKSDLMLAIEACIQIGSENYNINLH
Ga0335020_0042820_243_620	3300034082	Freshwater	MFSGKFIKKDGKLVFASPQDKLAYEIFLQKIPDGQKVDMYLDLIGIDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLAYKDGAMINYKSFGDCSKDELMLAIEACIQIGREQFNLNLG
Ga0335031_0001040_15724_16077	3300034104	Freshwater	MFTGKFIKKDGKLTYADPKDKLAYDIFISKLEEGQIIDMYLDLASVDHSKAQLAKVHACIRELAKESGYSFDDMKLLIKQNAGLEGKSFAECSKEQIALAIESCIQIGRENFNLSLG
Ga0335031_0521536_419_718	3300034104	Freshwater	MFSGKFIKKDGKLTYASPQDKLAYDMFLSKLEDGQIVDMYIDLASADHSKAQLAKVHACIRELAKESGYTFDEMKIVVKQASGLEDKSFADCSKDELMLA
Ga0335050_0269732_3_347	3300034108	Freshwater	SGKFIKKEGKLVYSRIQDKLAYEIFVEGLSENQEIEMFLDLIAHDHTKAQLAKVHACIRELAKESGYTFEEMKLVIKEQSGLTGKSFGECSKSDLMLAIEACIQIGKDQFNINL
Ga0335068_0009754_3439_3813	3300034116	Freshwater	MYTGKLIKKDGKLTYSNPKDKLAYELFLQKIPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECTKDQLMLAIEACIEIGVELNVNLQ
Ga0335068_0101964_1145_1519	3300034116	Freshwater	MYTGKLVKKEGKLTYTHPKDKLAYELFLQKLPEGQEVEMYIDLANADHSRAQINKVHACIRELAKESGYTFEEMKKIVKERSGLCYTDSEGEFCKSFAECSSDELMLAIQAAIEIGSQNYNLSL
Ga0335068_0300769_7_384	3300034116	Freshwater	MFSGRLIKKDGKLTYASPQDKLAYDIFISKLEEGQAVEMYIDLTSTDHSKAQLAKVHACIREMAKESGYTFDEMKCLVKDHAGLAYKEGLMITYKSFGDCSSTELTLAIEAAISIGEKNFNMNLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters