Metagenome Family F071111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071111
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	90 residues
Representative Sequence	MIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Number of Associated Samples	101
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.74 %
% of genes near scaffold ends (potentially truncated)	28.69 %
% of genes from short scaffolds (< 2000 bps)	75.41 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.361 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (10.656 % of family members)
Environment Ontology (ENVO)	Unclassified (46.721 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.016 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.04% β-sheet: 0.00% Coil/Unstructured: 66.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13473	Cupredoxin_1	19.67
PF07690	MFS_1	12.30
PF03150	CCP_MauG	10.66
PF01494	FAD_binding_3	3.28
PF06580	His_kinase	2.46
PF00072	Response_reg	1.64
PF03551	PadR	0.82
PF00034	Cytochrom_C	0.82
PF02518	HATPase_c	0.82
PF00127	Copper-bind	0.82
PF00082	Peptidase_S8	0.82
PF13703	Obsolete Pfam Family	0.82
PF03929	PepSY_TM	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	10.66
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	6.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.28
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.28
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.28
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	2.46
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	2.46
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.82
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.82
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.82
COG3182	PepSY-associated TM region	Function unknown [S]	0.82
COG3295	Uncharacterized conserved protein	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	71.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	71.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	71.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %
Unclassified	root	N/A	1.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_100047957	All Organisms → cellular organisms → Bacteria	4282	Open in IMG/M
3300004480\|Ga0062592_100109821	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300004480\|Ga0062592_100203136	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005093\|Ga0062594_101575873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300005093\|Ga0062594_102526198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300005293\|Ga0065715_10791075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300005327\|Ga0070658_10615218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	942	Open in IMG/M
3300005328\|Ga0070676_10323075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1053	Open in IMG/M
3300005329\|Ga0070683_100051170	All Organisms → cellular organisms → Bacteria	3824	Open in IMG/M
3300005330\|Ga0070690_100911827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	688	Open in IMG/M
3300005331\|Ga0070670_101516843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300005331\|Ga0070670_102023588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300005334\|Ga0068869_101550562	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300005337\|Ga0070682_101147835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300005340\|Ga0070689_100016677	All Organisms → cellular organisms → Bacteria	5377	Open in IMG/M
3300005344\|Ga0070661_100054461	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300005344\|Ga0070661_100617684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300005345\|Ga0070692_11228090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300005347\|Ga0070668_101886542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300005353\|Ga0070669_100431750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1083	Open in IMG/M
3300005354\|Ga0070675_100169027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1884	Open in IMG/M
3300005356\|Ga0070674_100120832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1939	Open in IMG/M
3300005356\|Ga0070674_100472904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1039	Open in IMG/M
3300005438\|Ga0070701_10563913	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300005459\|Ga0068867_101818167	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300005535\|Ga0070684_100748015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	912	Open in IMG/M
3300005543\|Ga0070672_100066160	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300005543\|Ga0070672_100499038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1053	Open in IMG/M
3300005544\|Ga0070686_101965426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300005564\|Ga0070664_100019129	All Organisms → cellular organisms → Bacteria	5631	Open in IMG/M
3300005564\|Ga0070664_100146213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2085	Open in IMG/M
3300005566\|Ga0066693_10080203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1147	Open in IMG/M
3300005577\|Ga0068857_100092171	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300005617\|Ga0068859_100003303	All Organisms → cellular organisms → Bacteria	16409	Open in IMG/M
3300006031\|Ga0066651_10271443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	901	Open in IMG/M
3300006046\|Ga0066652_100025492	All Organisms → cellular organisms → Bacteria → Proteobacteria	4148	Open in IMG/M
3300006755\|Ga0079222_10223675	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300006844\|Ga0075428_100298848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1731	Open in IMG/M
3300006876\|Ga0079217_10003693	All Organisms → cellular organisms → Bacteria	4418	Open in IMG/M
3300006880\|Ga0075429_101568843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300006881\|Ga0068865_101229052	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300006894\|Ga0079215_10113848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1220	Open in IMG/M
3300006969\|Ga0075419_10501765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300007004\|Ga0079218_10082933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2136	Open in IMG/M
3300009094\|Ga0111539_10191182	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300009098\|Ga0105245_12074547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300009177\|Ga0105248_10455611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1442	Open in IMG/M
3300009789\|Ga0126307_10128190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2025	Open in IMG/M
3300009840\|Ga0126313_10089974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2239	Open in IMG/M
3300009840\|Ga0126313_11299660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300010036\|Ga0126305_10101505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1729	Open in IMG/M
3300010036\|Ga0126305_10171861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300010037\|Ga0126304_10102885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1808	Open in IMG/M
3300010037\|Ga0126304_10267444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1128	Open in IMG/M
3300010039\|Ga0126309_10103046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1472	Open in IMG/M
3300010040\|Ga0126308_10171241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1382	Open in IMG/M
3300010041\|Ga0126312_10616986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300010042\|Ga0126314_10259046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1235	Open in IMG/M
3300010403\|Ga0134123_10476736	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300010403\|Ga0134123_12378976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300012900\|Ga0157292_10182525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300012912\|Ga0157306_10252718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300012951\|Ga0164300_11141406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300013102\|Ga0157371_10395967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300013308\|Ga0157375_10460876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1436	Open in IMG/M
3300015077\|Ga0173483_10731952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300015262\|Ga0182007_10139379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300015371\|Ga0132258_10598977	All Organisms → cellular organisms → Bacteria	2766	Open in IMG/M
3300015374\|Ga0132255_105972950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300018476\|Ga0190274_10155687	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300018482\|Ga0066669_11925564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300021445\|Ga0182009_10003825	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300022756\|Ga0222622_10009323	All Organisms → cellular organisms → Bacteria	4592	Open in IMG/M
3300022756\|Ga0222622_10195634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1338	Open in IMG/M
3300023263\|Ga0247800_1102243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300025315\|Ga0207697_10124149	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300025893\|Ga0207682_10003855	All Organisms → cellular organisms → Bacteria	6433	Open in IMG/M
3300025901\|Ga0207688_10006453	All Organisms → cellular organisms → Bacteria	6388	Open in IMG/M
3300025901\|Ga0207688_11045032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300025903\|Ga0207680_10806938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300025907\|Ga0207645_10750493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	663	Open in IMG/M
3300025908\|Ga0207643_10004001	All Organisms → cellular organisms → Bacteria	7929	Open in IMG/M
3300025909\|Ga0207705_10768265	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300025919\|Ga0207657_10518216	Not Available	933	Open in IMG/M
3300025920\|Ga0207649_10120868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1765	Open in IMG/M
3300025920\|Ga0207649_11573812	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300025923\|Ga0207681_10053964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2730	Open in IMG/M
3300025926\|Ga0207659_10050684	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300025926\|Ga0207659_10961447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300025927\|Ga0207687_10341718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1217	Open in IMG/M
3300025930\|Ga0207701_10252180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1540	Open in IMG/M
3300025931\|Ga0207644_10038425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3372	Open in IMG/M
3300025933\|Ga0207706_10028694	All Organisms → cellular organisms → Bacteria	4967	Open in IMG/M
3300025940\|Ga0207691_10037669	All Organisms → cellular organisms → Bacteria	4477	Open in IMG/M
3300025944\|Ga0207661_10015953	All Organisms → cellular organisms → Bacteria	5536	Open in IMG/M
3300025945\|Ga0207679_10020933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4425	Open in IMG/M
3300025945\|Ga0207679_10432850	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300025945\|Ga0207679_11332637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300025972\|Ga0207668_10421802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1133	Open in IMG/M
3300025986\|Ga0207658_11912546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300026023\|Ga0207677_10251744	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300026089\|Ga0207648_10819124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	867	Open in IMG/M
3300026121\|Ga0207683_10113889	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300027637\|Ga0209818_1121641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300027886\|Ga0209486_10698799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	654	Open in IMG/M
3300028380\|Ga0268265_10794677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	922	Open in IMG/M
3300030336\|Ga0247826_10382491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1035	Open in IMG/M
3300030496\|Ga0268240_10038650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	986	Open in IMG/M
3300031548\|Ga0307408_101006141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300031731\|Ga0307405_10423437	Not Available	1048	Open in IMG/M
3300031731\|Ga0307405_10844650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300031731\|Ga0307405_11694047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300031824\|Ga0307413_11051846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	700	Open in IMG/M
3300031852\|Ga0307410_10114659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1955	Open in IMG/M
3300031901\|Ga0307406_11109061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300031938\|Ga0308175_100705124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1096	Open in IMG/M
3300031938\|Ga0308175_101013002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	918	Open in IMG/M
3300031996\|Ga0308176_10701944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1049	Open in IMG/M
3300032002\|Ga0307416_100350968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1493	Open in IMG/M
3300032005\|Ga0307411_10474796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1052	Open in IMG/M
3300032074\|Ga0308173_10124925	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300032074\|Ga0308173_11387038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.56%
Environmental	Environmental	43.44%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.56%
Terrestrial	Environmental → Terrestrial	41.80%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	42.62%
Soil	Environmental → Terrestrial → Soil	41.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.93%
Sediment	Environmental → Aquatic → Sediment	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.66%
Loam	Environmental → Terrestrial → Soil → Loam	7.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	10.66%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	9.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1000479571	3300004463	Arabidopsis Thaliana Rhizosphere	MPDPMIATSTESSILPDRAETLIQVRAELRDNHPRLTDVQIDLIADVAVELRLAQIRLGMFSAPALPVVATPVRTRVPA
Ga0062592_1001098212	3300004480	Soil	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPTLPTPTPPVRTRVPALVGDSWETRVGA*
Ga0062592_1002031362	3300004480	Soil	MPDPMIATSTESSILPDRAETLIQVRAELRDNHPRLTDVQIDLIADVAVELRLAQIRLGMFSAPALPVVATPVRTRVPALVGDAWESRVGA*
Ga0062594_1015758731	3300005093	Soil	SGAPPLIHHATMTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0062594_1025261982	3300005093	Soil	LTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0065715_107910751	3300005293	Miscanthus Rhizosphere	MTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070658_106152181	3300005327	Corn Rhizosphere	MIAPSTESSTAPDRALTLIQVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGLLPTPALPAPTPPVRMRVPALVGDSWESRVGV*
Ga0070676_103230752	3300005328	Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIHLIADVACELRLAQIRLGMFATPSLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0070683_1000511702	3300005329	Corn Rhizosphere	MTDPMIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMLATPALPAPTPPVRMRVPALVGDSWESRVGV*
Ga0070690_1009118271	3300005330	Switchgrass Rhizosphere	IATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070670_1015168432	3300005331	Switchgrass Rhizosphere	LPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070670_1020235882	3300005331	Switchgrass Rhizosphere	TETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMIATPALPAPTPPVRMRVPALVGDSWESRVGV*
Ga0068869_1015505621	3300005334	Miscanthus Rhizosphere	MDDGTCPSGHAGSSGATPLIHHATMTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070682_1011478351	3300005337	Corn Rhizosphere	MADPMIATTSDSFALPDRTETLLQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGVFAAPSLPAAPAPVRTRVPALVGDGWESRVGA*
Ga0070689_1000166772	3300005340	Switchgrass Rhizosphere	MDDGTCPSGHAGSSGAPPLIHHATMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070661_1000544612	3300005344	Corn Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070661_1006176842	3300005344	Corn Rhizosphere	MTDPMIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGLLPTPALPAPTPPVRMRVPALVGDSWESRVGV*
Ga0070692_112280901	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MQTMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0070668_1018865422	3300005347	Switchgrass Rhizosphere	PDRTETLLLVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVDA*
Ga0070669_1004317502	3300005353	Switchgrass Rhizosphere	MPDSMIAPSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPSLPQPTAPVRIRVPALLGDAWEPPRAAEA*
Ga0070675_1001690272	3300005354	Miscanthus Rhizosphere	MIAPSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRVPALLGDAWEPPRAEA*
Ga0070674_1001208322	3300005356	Miscanthus Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFTTPALPTPTPPVRTRVPALVGDSWESRVDA*
Ga0070674_1004729041	3300005356	Miscanthus Rhizosphere	MPDSMIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0070701_105639132	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0068867_1018181671	3300005459	Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRVPALLGDAWEPPRAEA*
Ga0070684_1007480152	3300005535	Corn Rhizosphere	MTDPMIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMLATPALPAPTPPVRMRVPALVGDGWESRVGV*
Ga0070672_1000661602	3300005543	Miscanthus Rhizosphere	MIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0070672_1004990382	3300005543	Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0070686_1019654261	3300005544	Switchgrass Rhizosphere	PDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVGA*
Ga0070664_1000191293	3300005564	Corn Rhizosphere	MIASTSDSFALPDRTETLIQVRAELRDNHPRLTDTQIDLIADVACELRLAQIRLGMVAAPQLPPAQTPVRARVPALVGDSGWESRASA*
Ga0070664_1001462131	3300005564	Corn Rhizosphere	LIHHATMTDPMIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMLATPALPAPTPPVRMRVPALVGDGWESRVGV*
Ga0066693_100802032	3300005566	Soil	MIATSSESSSLPDRAETLVRVRAELRDHHPRLTDVQIDLIADVAVELRLAQIRIGMLAAPSVAAPASASAPLRARVPALVGDAWEPSRLEA*
Ga0068857_1000921712	3300005577	Corn Rhizosphere	MIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0068859_10000330313	3300005617	Switchgrass Rhizosphere	MIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVDA*
Ga0066651_102714431	3300006031	Soil	MIATSSESSSLPDRAETLVRVRAELRDHHPRLTDVQIDLIADVAVELRLAQIRIGMLAVPSVASPASASAPLRARVPALVGDAWEPSRLEA*
Ga0066652_1000254925	3300006046	Soil	MIATSSESSSLPDRAETLVRVRAELRDHHPRLTDVQIDLIADVAVELRLAQIRIGMLAAPSVAVPASPSAPLRARVPALVADAWEPSRLEA*
Ga0079222_102236752	3300006755	Agricultural Soil	MSDPMIATSSDSFAIPDRTETLLQVRAELRDNHPRLTDMQIDLIADVACELRLAQIRLGVVAAPSLPPAPAPVRARVPALVGDGWESQVGA*
Ga0075428_1002988481	3300006844	Populus Rhizosphere	MIATSSDSPALPDRAVTLIQVRAELRDNHPRLTDMQIDLIADVACELRLAQIRLGMFTTPSLPVPAAPVRMRVPALLGDAWEPPRVDA*
Ga0079217_100036931	3300006876	Agricultural Soil	MIATSTEPSALPDRAETFVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVFATPSLAAPAPVRARVPALVGDAWEPQLEA*
Ga0075429_1015688431	3300006880	Populus Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFVTPELPTPTPPVRTR
Ga0068865_1012290521	3300006881	Miscanthus Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVGA*
Ga0079215_101138481	3300006894	Agricultural Soil	MPDQMIATSTEPSALPDRAETFVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVFATPSLAAPAPVRARVPALVGDAWEPQLEA*
Ga0075419_105017652	3300006969	Populus Rhizosphere	MIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFVTPELPTPTPPVRTRVPALVGDSWDSRVGT*
Ga0079218_100829333	3300007004	Agricultural Soil	MIATSSDSSTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMLATPSLPQPPAPVRMRVPALVGDSWEPPRAEA*
Ga0111539_101911822	3300009094	Populus Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFVTPELPTPTPPVRTRVPALVGDSWDSRVGA*
Ga0105245_120745471	3300009098	Miscanthus Rhizosphere	TMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0105248_104556112	3300009177	Switchgrass Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVDA*
Ga0126307_101281902	3300009789	Serpentine Soil	MPDQMTATSTDVPVVPDRAETLIQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRFGMFDTPSLPSPAERPRMRVPGLVGDAWEPRLQA*
Ga0126313_100899742	3300009840	Serpentine Soil	MPDQMTATSTDVPVVPDRAETLIQVRAELRDNHPRLTDKQIDLIADVAVELRLARIRFGMLDTPSLPSPSERPRMRVPGLVGDAWEPRLEA*
Ga0126313_112996602	3300009840	Serpentine Soil	MIATSSDSSTQPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMLAPAVPAPPATPAPVRTRV
Ga0126305_101015052	3300010036	Serpentine Soil	MIAPSTESSIAPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPSLPQAAAPVRIRVPALLGDAWEPPRAEA*
Ga0126305_101718612	3300010036	Serpentine Soil	MPDPMIAPISESFLPDRAETLIQVRAELRDNHPRLTDIQIDLIADVACELRLAKIRLGMLDTPSLPAPPTPVRTRIPALVGDAWESRVGA*
Ga0126304_101028852	3300010037	Serpentine Soil	LIHDATMPDPMIAPISESFLPDRAETLIQVRAELRDNHPRLTDIQIDLIADVACELRLAKIRLGMLDTPSLPAPPTPVRTRIPALVGDAWESRVGA*
Ga0126304_102674442	3300010037	Serpentine Soil	MIATSTESPTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPSLPQPTAPVRIRVPALVGDAWEPPRIEA*
Ga0126309_101030462	3300010039	Serpentine Soil	MPDQMTAISTEPSALPDRAETLIQVRSELRDNHPRLTDKQIDLIADVAVELRLTQIRYGLFDTPSLPTAPVPGRVRVPGLVDDGWEPRLEA*
Ga0126308_101712412	3300010040	Serpentine Soil	MPDQMTATTAEHSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRFGLVDTPSLPTPPAFPRARVPGLVDDSWETGLEA*
Ga0126312_106169861	3300010041	Serpentine Soil	MIATSTESPTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPSLPQPAAPVRIRVPALLGDAWEPPRA
Ga0126314_102590461	3300010042	Serpentine Soil	MPDPMIATTSESPAVPDRDVTLIQVRAELRDNHPRLTDTQIDLIADVACELRLTQIRLGMMVGPQLPATPAAPVRARVPALVGDAWEPRAEE*
Ga0134123_104767362	3300010403	Terrestrial Soil	MIAPSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRV
Ga0134123_123789762	3300010403	Terrestrial Soil	MQTMTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFTTPALPTPTPPVRTRVPALVGDSWETRVGA*
Ga0157292_101825252	3300012900	Soil	MMPTMPDSMIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0157306_102527181	3300012912	Soil	MMPTMPDSMIATSTESSTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0164300_111414061	3300012951	Soil	MPDPMIATTFVCFDHPDTTETLIQVRAELRDNHPRLTDIQIDLIADVACELRLAQIRLGVLAPTLPAAPPVRARVPALVGDAWDSRVGA*
Ga0157371_103959672	3300013102	Corn Rhizosphere	MTDPMIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVGA*
Ga0157375_104608761	3300013308	Miscanthus Rhizosphere	TMTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA*
Ga0173483_107319521	3300015077	Soil	LIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA*
Ga0182007_101393792	3300015262	Rhizosphere	MPDPMIATTTDSFTLPDRTETLIQVRAELRDNHPRLTDIQIDLIADVACELRLAQIRLGVLAAPSLPGAPTPARTRVPALVGDSWESQVDA*
Ga0132258_105989772	3300015371	Arabidopsis Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRMRVPALVGDSWDSRVDA*
Ga0132255_1059729502	3300015374	Arabidopsis Rhizosphere	ALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRMRVPALVGDSWDSRVDA*
Ga0190274_101556872	3300018476	Soil	MIATSTESSIPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMLATPSLPEPPAPVRIRVPALVGDAWVPPRAEA
Ga0066669_119255642	3300018482	Grasslands Soil	MPDRMIATSSESSSLPDRAETLVQVRAELRDHHPRLTDVQIDLIADVAVELRLAQIRIGMLAVPSVASPASASAPLRARVPALVGDAWEPSRLEA
Ga0182009_100038252	3300021445	Soil	MIATTSDSFALPDRTETLLQVRAELRDNHPRLTDTQIDLIADVACELRLAQIRLGVVATPSLPATPAPVRMRVPALVGDGWESQVGA
Ga0222622_100093233	3300022756	Groundwater Sediment	MIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMLATPALPAPTPPVRMRVPALVGDGWESRVGV
Ga0222622_101956342	3300022756	Groundwater Sediment	MIATSSESSTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPSLPEPPAPVRMRVPALIGDAWEPPRAEA
Ga0247800_11022432	3300023263	Soil	TSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFGTPSLPQPTAPVRMRVPALVGDAWEPPRAEA
Ga0207697_101241492	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRAANRDATCCNSYPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207682_100038556	3300025893	Miscanthus Rhizosphere	MIAPSTESSTAPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPSLPQTTAAPVRIRVPALLGDAWEPPRAEA
Ga0207688_100064535	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVDA
Ga0207688_110450321	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRVPALLGDAWEPPRAEA
Ga0207680_108069381	3300025903	Switchgrass Rhizosphere	MDDGTCPSGHAGSSGAPPLIHHATMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELRTPTPPVRTRVPALVGDSWDSRVDA
Ga0207645_107504932	3300025907	Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPSLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207643_100040013	3300025908	Miscanthus Rhizosphere	MIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207705_107682651	3300025909	Corn Rhizosphere	DRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGLLPTPALPAPTPPVRMRVPALVGDSWESRVGV
Ga0207657_105182161	3300025919	Corn Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSW
Ga0207649_101208681	3300025920	Corn Rhizosphere	MTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207649_115738122	3300025920	Corn Rhizosphere	MIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGLLPTPALPAPTPPVRMRVPALVGDSWESRVGV
Ga0207681_100539642	3300025923	Switchgrass Rhizosphere	MDDGTCPSGHAGSSGAPPLIHHATMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207659_100506842	3300025926	Miscanthus Rhizosphere	MIAPSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRVPALLGDAWEPPRAEA
Ga0207659_109614472	3300025926	Miscanthus Rhizosphere	ATMPDSMIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207687_103417181	3300025927	Miscanthus Rhizosphere	GSSGAPPLIHHATMTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207701_102521802	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207644_100384253	3300025931	Switchgrass Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVDA
Ga0207706_100286944	3300025933	Corn Rhizosphere	MTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207691_100376691	3300025940	Miscanthus Rhizosphere	MIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207661_100159533	3300025944	Corn Rhizosphere	MIATSTDSSALPDRTETLMLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGMLATPALPAPTPPVRMRVPALVGDSWESRVGV
Ga0207679_100209333	3300025945	Corn Rhizosphere	MIASTSDSFALPDRTETLIQVRAELRDNHPRLTDTQIDLIADVACELRLAQIRLGMVAAPQLPPAQTPVRARVPALVGDSGWESRASA
Ga0207679_104328501	3300025945	Corn Rhizosphere	TSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207679_113326371	3300025945	Corn Rhizosphere	ATMPDSIIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFATPTLPQPTAPVRIRVPALLGDAWEPPRAEA
Ga0207668_104218021	3300025972	Switchgrass Rhizosphere	MTDPMIATSSDSSALPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVDA
Ga0207658_119125462	3300025986	Switchgrass Rhizosphere	MTDPMIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRTRVPALVGDSWDSRVDA
Ga0207677_102517441	3300026023	Miscanthus Rhizosphere	TESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVEA
Ga0207648_108191241	3300026089	Miscanthus Rhizosphere	MIATSTESSTPPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMFTTPTLPQTTAPVRIRVPALLGDAWEPPRAEA
Ga0207683_101138893	3300026121	Miscanthus Rhizosphere	MIAPSTESSTAPDRALTLIQVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRIGLLPTPALPAPTPPVRMRVPALVGDSWESRVGV
Ga0209818_11216411	3300027637	Agricultural Soil	MPDQMIATSTEPSALPDRAETFVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVFATPSLAAPAPVRARVPALVGDAWEPQLEA
Ga0209486_106987991	3300027886	Agricultural Soil	TMPESMIATSSDSSTLPDRALTLIQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRLGMLATPSLPQPPAPVRMRVPALVGDSWEPPRAEA
Ga0268265_107946771	3300028380	Switchgrass Rhizosphere	MIATSSDSSAIPDRTETLLLVRAELRDNHPRLTDVQIDLIADVAVDLRLAQIRLGMFATPELPTPTPPVRARVPALVGDSWDSRVDA
Ga0247826_103824911	3300030336	Soil	MQDRAVPYPSLMMRPMPDSMIATSSDSPALPDRAVTLIQVRAELRDNHPRLTDIQIDLIADVACELRLAQIRLGMFAAPSLPVPPAPVRIRVPALVGDAWEPPRVDA
Ga0268240_100386501	3300030496	Soil	MIATTSDSFALPDRTETLIQVRAELRDNHPRLTDTQIDLIADVACELRLAQIRLGIVATPSLPATPAPVRTRVPALVGDDWESRVGA
Ga0307408_1010061412	3300031548	Rhizosphere	MIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWAEQLQA
Ga0307405_104234371	3300031731	Rhizosphere	MPDQMIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWAEQ
Ga0307405_108446502	3300031731	Rhizosphere	IFHATMPDQMIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWEQQLPA
Ga0307405_116940471	3300031731	Rhizosphere	MTATLSDSEVLSDHAILPDRTETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGMFGQPSLPAPAAPLRARVSALVGDGWEAREAVS
Ga0307413_110518462	3300031824	Rhizosphere	MIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWEQQLPA
Ga0307410_101146592	3300031852	Rhizosphere	MPDQMIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWEQQLPA
Ga0307406_111090611	3300031901	Rhizosphere	MPDQMIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWAEQLQA
Ga0308175_1007051241	3300031938	Soil	MIAISSDSSALPDRTETLLQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRIGMLPSPTPSQPATPTPVSSPVRMRVPALVGDAWESRVGA
Ga0308175_1010130021	3300031938	Soil	MIATTSDSFALPDRTETLIQVRAELRDNHPRLTDTQIDLIADVACELRLAQIRLGMVAAPQLPPAPAPVRARVPALVGDSSWESRASA
Ga0308176_107019441	3300031996	Soil	HVSQCHAGSSGPPPLIHHATMPDQMIAISSDSSALPDRTETLLQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRIGMLPSPTPSQPATPTPVSSPVRMRVPALVGDAWESRVGA
Ga0307416_1003509683	3300032002	Rhizosphere	RAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVFGTPSLPSAPAPLRTRVPALIGDAWEPQLEA
Ga0307411_104747962	3300032005	Rhizosphere	MIATSTESSALPDRAETLVQVRAELRDNHPRLTDKQIDLIADVAVELRLAQIRLGVVTTPSLPAPAAPQRIRVPALVGDAWEGQLQA
Ga0308173_101249252	3300032074	Soil	MIATSSDSSALPDRTETLLQVRAELRDNHPRLTDVQIDLIADVACELRLAQIRIGMLPSPTPSQPVSLPSPAPVRMRVPALVGDAWESRVGA
Ga0308173_113870381	3300032074	Soil	MPDQMIAISSDSSALPDRAETLLQVRAELRDNHPRLTDVQIDLIADVACDLRLAQIRIGRLPSPTPPQPAQPAQSAQSAQPAAVRMRVPALVGDAWPSRVGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences