Metagenome Family F071067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071067
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	62 residues
Representative Sequence	MPASLTRRQLLQASGLTLGALSLGRSAFGQTPKDGGTFISARTTEATGLDPQLVPAFSRS
Number of Associated Samples	110
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.28 %
% of genes near scaffold ends (potentially truncated)	86.07 %
% of genes from short scaffolds (< 2000 bps)	82.79 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.066 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.934 % of family members)
Environment Ontology (ENVO)	Unclassified (24.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.082 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.23% β-sheet: 0.00% Coil/Unstructured: 64.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00528	BPD_transp_1	78.69
PF12911	OppC_N	7.38
PF02633	Creatininase	1.64
PF02738	MoCoBD_1	1.64
PF12543	DUF3738	0.82
PF05448	AXE1	0.82
PF02776	TPP_enzyme_N	0.82
PF00496	SBP_bac_5	0.82
PF13607	Succ_CoA_lig	0.82
PF04545	Sigma70_r4	0.82
PF12973	Cupin_7	0.82
PF00999	Na_H_Exchanger	0.82
PF02785	Biotin_carb_C	0.82
PF07969	Amidohydro_3	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	1.64
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.82
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.82
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.82
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.82
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.82
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.07 %
Unclassified	root	N/A	13.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.07 %
Unclassified	root	N/A	13.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.07 %
Unclassified	root	N/A	13.93 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	50.82 %
Unclassified	root	N/A	13.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	50.82 %
Unclassified	root	N/A	13.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	50.82 %
Unclassified	root	N/A	13.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	36.07 %
Unclassified	root	N/A	13.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.07 %
Unclassified	root	N/A	13.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0952388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300002908\|JGI25382J43887_10133403	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300003203\|JGI25406J46586_10265776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300004114\|Ga0062593_100811910	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300004479\|Ga0062595_101162247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	681	Open in IMG/M
3300005331\|Ga0070670_101559923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300005345\|Ga0070692_11346246	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005353\|Ga0070669_101558203	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005364\|Ga0070673_101553341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300005440\|Ga0070705_101899719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300005467\|Ga0070706_100489234	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005555\|Ga0066692_10704979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	626	Open in IMG/M
3300005575\|Ga0066702_10048738	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300005587\|Ga0066654_10696770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	569	Open in IMG/M
3300005598\|Ga0066706_10251707	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300005617\|Ga0068859_102671672	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005764\|Ga0066903_100562396	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300005764\|Ga0066903_108046681	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006028\|Ga0070717_10963703	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300006032\|Ga0066696_10694349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300006046\|Ga0066652_101769523	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006794\|Ga0066658_10942085	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006804\|Ga0079221_11774398	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006854\|Ga0075425_102055723	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006914\|Ga0075436_100562991	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300006918\|Ga0079216_10808786	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300007255\|Ga0099791_10045114	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300007265\|Ga0099794_10494556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300009012\|Ga0066710_104543285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300009038\|Ga0099829_11360203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300009147\|Ga0114129_11021558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300009156\|Ga0111538_10485318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1566	Open in IMG/M
3300009157\|Ga0105092_10344421	Not Available	844	Open in IMG/M
3300010043\|Ga0126380_10347508	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300010048\|Ga0126373_11520661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	734	Open in IMG/M
3300010335\|Ga0134063_10338708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	729	Open in IMG/M
3300010359\|Ga0126376_10699106	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300010360\|Ga0126372_10028349	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300010362\|Ga0126377_11463642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300010362\|Ga0126377_11885799	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300010376\|Ga0126381_103587684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300010376\|Ga0126381_104916829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300010398\|Ga0126383_13496642	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010399\|Ga0134127_10605746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1124	Open in IMG/M
3300011269\|Ga0137392_10765513	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300011269\|Ga0137392_11609065	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300011271\|Ga0137393_11443667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300012096\|Ga0137389_11156679	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012199\|Ga0137383_10960625	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300012200\|Ga0137382_10164650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1510	Open in IMG/M
3300012202\|Ga0137363_10999306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300012205\|Ga0137362_10774894	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300012226\|Ga0137447_1097248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300012349\|Ga0137387_10453599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300012922\|Ga0137394_10603904	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	928	Open in IMG/M
3300012927\|Ga0137416_10721142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	877	Open in IMG/M
3300012971\|Ga0126369_12653817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	585	Open in IMG/M
3300013306\|Ga0163162_10230313	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300013306\|Ga0163162_12227651	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300015053\|Ga0137405_1273589	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300015241\|Ga0137418_10302835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1336	Open in IMG/M
3300015264\|Ga0137403_11031254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300015359\|Ga0134085_10372783	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300015372\|Ga0132256_101555466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300017656\|Ga0134112_10232948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300018060\|Ga0187765_10099233	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300018076\|Ga0184609_10075561	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300018422\|Ga0190265_10286366	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300018433\|Ga0066667_12239319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	510	Open in IMG/M
3300018466\|Ga0190268_11276334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300018469\|Ga0190270_11782749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	671	Open in IMG/M
3300018482\|Ga0066669_10353350	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300018482\|Ga0066669_10564497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300023066\|Ga0247793_1012587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1180	Open in IMG/M
3300025885\|Ga0207653_10245017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300025910\|Ga0207684_10855804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	766	Open in IMG/M
3300025936\|Ga0207670_10256431	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300026089\|Ga0207648_11816217	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300026309\|Ga0209055_1272875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300026310\|Ga0209239_1021701	All Organisms → cellular organisms → Bacteria	3174	Open in IMG/M
3300026329\|Ga0209375_1005400	All Organisms → cellular organisms → Bacteria	8511	Open in IMG/M
3300026334\|Ga0209377_1125389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1023	Open in IMG/M
3300026494\|Ga0257159_1085824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300026538\|Ga0209056_10333481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1014	Open in IMG/M
3300026551\|Ga0209648_10308656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1125	Open in IMG/M
3300026900\|Ga0207444_1011587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300027481\|Ga0207459_106198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300027874\|Ga0209465_10287849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	823	Open in IMG/M
3300027907\|Ga0207428_10298711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1192	Open in IMG/M
3300028380\|Ga0268265_10206239	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300028380\|Ga0268265_12444212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300028809\|Ga0247824_10263708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	959	Open in IMG/M
3300028819\|Ga0307296_10532417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300028824\|Ga0307310_10229235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	886	Open in IMG/M
3300028828\|Ga0307312_10268415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1107	Open in IMG/M
3300028889\|Ga0247827_10080734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1578	Open in IMG/M
3300030006\|Ga0299907_10130818	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300031229\|Ga0299913_11893382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300031455\|Ga0307505_10325990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300031740\|Ga0307468_102068996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300032174\|Ga0307470_10401852	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032174\|Ga0307470_10986638	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300032180\|Ga0307471_101278297	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	896	Open in IMG/M
3300032180\|Ga0307471_103713550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300032180\|Ga0307471_103814719	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300033485\|Ga0316626_10773201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	841	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.43%
Host-Associated	Host-Associated	15.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.51%
Plants	Host-Associated → Plants	15.57%
Aquatic	Environmental → Aquatic	4.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.74%
Freshwater	Environmental → Aquatic → Freshwater	2.46%
Sediment	Environmental → Aquatic → Sediment	2.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.85%
Loam	Environmental → Terrestrial → Soil → Loam	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.46%
Lake	Environmental → Aquatic → Freshwater → Lake	1.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026900	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027481	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09523881	2228664021	Soil	MPTSLTRRQLLQAGGLTLGTLSLGRSAFGQAPRDGGTFVSARTTEATGLDPQLVPAFSRSARSPLMYN
JGI25382J43887_101334031	3300002908	Grasslands Soil	MTTMTRRRLLQAGGLTLGALALPRPVHAQTPKAGGTFVTARTTEATGLDPQLVPAFSRSARSPLM
JGI25406J46586_102657762	3300003203	Tabebuia Heterophylla Rhizosphere	MRHDLTRRQLLQASGLTLGALAVGKTAFGQTPRPGGTFISARTTEATGLDPQLVPAFSRSARSPM
Ga0062593_1008119102	3300004114	Soil	MSTPDLAPRDPSRLSRRQLLQASGLTLGALAVGRHAYGQTPKEGGTFISARTTEATGLDPQLVPAFS
Ga0062590_1013293252	3300004157	Soil	MAGQWNRREFVKAGTLTAAAVGMGRVAWAQTPRAGGTLVSAQTTEATGLDPQLVPAFS
Ga0062595_1011622471	3300004479	Soil	MSKENPLNLSRRQVLKAGGLTLGALAMGRRAAAQAPKPGGTLVSAQTTEATGLDPQLV
Ga0070670_1015599231	3300005331	Switchgrass Rhizosphere	MTDHLTRRQLLQAGGLTLGALSLGRPAFGQTPKPGGSFVSGRTTEATGLDPQLVPAFS
Ga0070692_113462462	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDHGSPRSHLSRRQLLKAGGLTLGALAVGRRAAAQSPKPGGSLISAQATEATGLDPQLVPALS
Ga0070669_1015582032	3300005353	Switchgrass Rhizosphere	MTDRLTRRQLLQAGGLTLGALSLGRPALGQTPKPGGTFVSGRTTEATGLDPQL
Ga0070673_1015533412	3300005364	Switchgrass Rhizosphere	MRSHLTRRQLLQASGLTLGALSLGRSAFGQTPKEGGTFISARTTEATGLDPQLVPAFSRSARSPLMYNQLV
Ga0070705_1018997191	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MITRRRMLKASGLGLGALTFGTSALGQAPKRGGSLVSAQTTEATGLDPQLVPAFSRSRRS
Ga0070706_1004892342	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTNRPRPSEFSRLSRRDALKLGGAALGTLAFGTQAFAQTPKPGGSFISAQTTEATGLDPQLVPALSRSRRS
Ga0066692_107049792	3300005555	Soil	MTTMTRRRLLQAGGLTLGALALDRRAHAQAKAGGTFVTARTTEATGLDPQLVPAFSRSARSPLMYNQLV
Ga0066702_100487381	3300005575	Soil	MTQLTRRELLETAGLTLGALSLPRPARAQTARGGTLISAQTTEATGLDPQLVPALSR
Ga0066654_106967702	3300005587	Soil	MTMHLSRRELLTAGGAALAALSVGRAAHGQAPKSGSTFVSAQTTEATGLDPQLVPAFSRSRRS
Ga0066706_102517073	3300005598	Soil	MQSHLTRRQLLQASGLTLGALAVGKHTFGQTPKPGGTFVSARTTEATGLDPQLVP
Ga0068859_1026716722	3300005617	Switchgrass Rhizosphere	MTHLTRRQLLQTSGLTLGALSLGRPALGQTPKPGGSFVSGRTTEATGLDPQLVPAFSRS
Ga0066903_1005623963	3300005764	Tropical Forest Soil	MLTRREMLMASGLGLGTLTLGRSAFGQTPKRGGSFISAQTTEATGLDPQLVPAFSRSRRSPMMYNQ
Ga0066903_1080466812	3300005764	Tropical Forest Soil	MLTRREMLVGSGLGLGTLALGRSAFGQAPRRGGSFISAQTTEATGLDPQLVPAFSRSRRSPMMYNQ
Ga0070717_109637031	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTIDPGHIDGSRLSRRQLLQAGGLALGALAVGRPAAAQSPRSGGSLISAQATEATGLDPQLVPAL
Ga0066696_106943491	3300006032	Soil	MTQLTRRELLETAGLTLGALSLPRPARAQTARGGTLISAQTTEATGLDPQLVPALS
Ga0066652_1017695232	3300006046	Soil	MRNDLTRRQLLQTSGLTLGALAVGKHALGQAPKPGGTFVSARTTEATGLDPQLVPAFS
Ga0066658_109420851	3300006794	Soil	MTQLTRRQLLEAAGLTLGALSLPRPARAQVARHGGTLISAQTTEATGLDPQLVPALSRSRRSP
Ga0079221_117743981	3300006804	Agricultural Soil	MTTMTRRQLLQAGGLTLGALALPRRADAQTPKAGGTFVTARTTEATGLDPQLVPAFSRSARSP
Ga0075433_101653153	3300006852	Populus Rhizosphere	MSQLTRRQVLKSAGLTAGAFAFPRRASAQTKPGTLISAQTTEATGLDPQLVPALSRSRRSPLTYNQ
Ga0075425_1020557231	3300006854	Populus Rhizosphere	MTTAPESSTPDALTRRDLLKAGGLTLGALALGTPAAAQTPKAGGTLVSAQTTEATGLDPQLVPALSRSR
Ga0075426_101671671	3300006903	Populus Rhizosphere	MSQLTRRQVLKSAGLTAGAFAFPRRGAAQTKPGTLISAQTTEATGLDPQLVPALSRSR
Ga0075436_1005629912	3300006914	Populus Rhizosphere	MTIDPGHIDGSRLSRRQLLQAGGLALGALAVGRPAAAQSPRTGGSLISAQATEATGLDPQLVPALSRSRR
Ga0079216_108087862	3300006918	Agricultural Soil	MTQHLTRRQLLQASALTAGALAVGRSALAQAPKPGGTFVSARTTEATGLDPQLVPAFSRSARSPM
Ga0099791_100451143	3300007255	Vadose Zone Soil	MTQLTRRQLLEAAGLTLGALSLPRPARAQTPKNGGTLVSAQTTEATGLDPQLVPAF
Ga0099794_104945561	3300007265	Vadose Zone Soil	MRNDLTRRQLLQASGLTLGVLAVGTHAFGQTPKPGGTLVSARTTEATGL
Ga0066710_1045432851	3300009012	Grasslands Soil	MTNELSRRQFLEATGLALGALAAGTDAIGQTPKPGGTFVSARTTEATGLDPQLVPAFSRS
Ga0099829_113602032	3300009038	Vadose Zone Soil	MRNLTRRQLLQASGLTLGALAVGKHAFGQSPKPGGTFVSARTTEATGLDPQLVPAFSR
Ga0114129_110215581	3300009147	Populus Rhizosphere	MPRGEETMTSMSRRQLLQTSGLALGALSLPRAAHAQKAGGTFVSARTTEATGLDPQLVPA
Ga0111538_104853184	3300009156	Populus Rhizosphere	MQAAGLTLGSLAVGRTALGQTPKEGGTFVSARTTEATGLDPQLVPAFSRSARSPLMYN
Ga0105092_103444211	3300009157	Freshwater Sediment	MTQHLTRRQLLQASALTAGALAVGRDALAQAPRPGGTFISARTTEATGLDPQL
Ga0126380_103475082	3300010043	Tropical Forest Soil	MTTNRERAHDNGLSRRRLLQMGGLTLGALSVGRRAHAQTPKPGGSFISAQTTEATGLDPQ
Ga0126373_115206611	3300010048	Tropical Forest Soil	MTTNRERSDDSGLSRRRLLQMAGLTLGALSVGRRAHAQTPKPGGTFISAQTTEATGLDPQLVPALS
Ga0134063_103387081	3300010335	Grasslands Soil	MTMHLSRRELLTAGGAALAALSVGRAAHGQAPKSGSTFVSAQTTEATGLDPQLVPAFSRSRRSPM
Ga0126376_106991062	3300010359	Tropical Forest Soil	MTTNRERSDDSGLSRRRLLQMGGLTLGALSMGRRAHAQTPKPGGNFISAQTTEATGLDPQLVPALSR
Ga0126372_100283491	3300010360	Tropical Forest Soil	MTQPMTRRQLLQTGALTAGALSLSRPVFGQTPKPGGTFVSARTTEATGLDPQLVPAFSRSARSPMM
Ga0126377_114636421	3300010362	Tropical Forest Soil	MNDSTRAPLTRRDLLRATGLGLGALALARPAAAQSPHPGGTFVSAQTTEATGLDPQLVPALSRSRRSP
Ga0126377_118857991	3300010362	Tropical Forest Soil	MTTMTRRRLLQAGGLSLGALALPRPVHAQTPKAGGTFVTARTTEATGLDPQLVPA
Ga0126381_1035876841	3300010376	Tropical Forest Soil	MSQLTRRQVLKSAGLTAGAFAFPRRAFAQSKPGTLISAQTTEATGLDPQLVPALSRSRRSPLTYNQL
Ga0126381_1049168292	3300010376	Tropical Forest Soil	MTTTRECSDDNGLSRRRLLQIGGLTLGALSLGRRAHAQTPKPGGSFISAQTTEATGLDPQLVPALSR
Ga0136847_110959701	3300010391	Freshwater Sediment	MTTDREHTDPTRLSPTRLSPTRLSPTRLSRRDVLKIGGATLGALSVGTRAWAQAPKPGGSFVSAQSTEATGLDPQLVPAFSRSRRSPMMYN
Ga0126383_134966421	3300010398	Tropical Forest Soil	MTTHHDDGHRLTRRALLKAGGLAAGALAVGRPAWAQTPKSGGTFISAQTTEATGLDPQLVPALS
Ga0134127_106057462	3300010399	Terrestrial Soil	MTTESSSFDPRGLTRRQLLKAGGLAAGALSLGRPALAQTPKPGGILISAQNNEATGLDPQLVPAFSRSR
Ga0137392_107655132	3300011269	Vadose Zone Soil	MTTSPEPSNPDALTRRELLKTGGLTLGALALGTPAFAQTPKAGGTLVSAQTTEATGLDPQLVP
Ga0137392_116090652	3300011269	Vadose Zone Soil	MTTDHEHSNPAGLTRRQMLKVAGVTLGAMSAGRQAWAQAPKPGGSFVSAQTTEATGL
Ga0137393_114436672	3300011271	Vadose Zone Soil	MRRQTMTTSMTRRQLLQAGGLTLGGLSLGRSALGQTPREGGTFISARTTEATGL
Ga0137443_11757652	3300011433	Soil	MTTDREHTDPTRLSPSLSRRHLLKIGGATLGALSVGTRAWAQAPKPGGSFVSAQTTEATGLDPQPGRGRARARR*
Ga0137389_111566791	3300012096	Vadose Zone Soil	MTTSPEPSNRDALTRRELLKTGGLTLGALALGTPAFAQTPKAGGTLVSAQTTEATGLDPQLVPAL
Ga0137383_109606252	3300012199	Vadose Zone Soil	MNQLTRRQLLKSAGLTAGAFALPRRAGAQTKPGTLISAQTTEATGLDPQLVPALSRSRRSPLTYNQL
Ga0137382_101646501	3300012200	Vadose Zone Soil	MTTSMTRRQLLQAGGLTLGGLSLGRHALAQTPREGGTFVSARTTEATGLDPQLVPAFSRS
Ga0137363_109993061	3300012202	Vadose Zone Soil	MTASLTRRQLLQAGGLTLGALSLGRRAAGQAPKDGGTFTSARTTEATGLDPQLV
Ga0137362_107748941	3300012205	Vadose Zone Soil	MTTAPEPSTPDALTRRALLKAGGLTLGALALGTPAAAQTPKAGGTLVSAQTTEATGLDPQLVPA
Ga0137447_10972481	3300012226	Soil	MTHALTRRQLLQAGGLTLGTLTLGRSAFGQTPKAGGTFISAQTTEATGLDPQLVPA
Ga0137387_104535992	3300012349	Vadose Zone Soil	MTTSMTRRQLLQAGGLTLGGLSLGPHALAQTPREGGTFVSARTTEATGLDPQLVPAFSRSARSPMMYNQLV
Ga0137394_106039042	3300012922	Vadose Zone Soil	MTRRQLLQASGLTLGGLSLGRHALGQTPREGGTFVSARTTEATGLDPQLVPAFSRSA
Ga0137416_107211422	3300012927	Vadose Zone Soil	MSHHLTRRQLLQAGGLTLGALSLPRHVFGQTPKPGGTFVSARTTEATGLDPQLVPAFSRSARSP
Ga0126369_113144641	3300012971	Tropical Forest Soil	MSQPTRRQVLKAAGLTAGAFAFPRRAVAQTKPGSLITAQTTEATGLDPQLVPALSRSRR
Ga0126369_126538171	3300012971	Tropical Forest Soil	MRTPDPAPRDPHRLSRRQLLQASGLTLGALAVGRHAYGQAPKDGGTFISARTTEATGLDPQLVPAFSRSARSPL
Ga0163162_102303131	3300013306	Switchgrass Rhizosphere	MPIDHGSPRSHLSRRQLLKAGGLTLGALAVGRRAAAQSPKPGGSLISAQATEATGLDPQLVPA
Ga0163162_122276512	3300013306	Switchgrass Rhizosphere	VARRDVLKAGGLALGALSMARPALAQTPKPGGSLVSAQTTEATGLDPQLVPALSRSRRSPLM*
Ga0137405_12735892	3300015053	Vadose Zone Soil	MTTSPEFSNADGLTRRELLKAGGLTLGALALGTPAAAQTPKAGGTLVSAQTTEATGLDPQLVPALSR
Ga0137418_103028352	3300015241	Vadose Zone Soil	MTTDHEHSNPAGLTRRQVLKVAGVTLGAMSAGRQAWAQAPKPGGSFVSAQTTEATGLDPQLVPA
Ga0137403_110312543	3300015264	Vadose Zone Soil	MPLDRQRSAPRSVTRREVLKAGGLALGVLSMARPALAQTPKPGGSLVSAQTTEATGLDPQLVPALSRSR
Ga0134085_103727832	3300015359	Grasslands Soil	MTTTRESSTPDALTRRDLLKAGGLTLGALALGTPAAAQTPKAGGTLVSAQTTEATGLDPQLVPAL
Ga0132256_1015554662	3300015372	Arabidopsis Rhizosphere	MRSHLTRRQLLQASGLTLGALSLGRSAFGQTPKEGGTFISARTTEATGLDPQLV
Ga0134112_102329481	3300017656	Grasslands Soil	MTTMTRRRLLQAGGLTLGALALLRRAQAQGRAGGTFVTARTTEATGLDPQLVPAFSRS
Ga0187765_100992331	3300018060	Tropical Peatland	MTPTRHHDAHRLTRRELLKAGGLAAGALAVGRSAWGQTPKAGGTFISAQTTEATGLDPQLVPAL
Ga0184609_100755613	3300018076	Groundwater Sediment	MTHALTRRQLLQAGGLTLGTLALGRSAFGQTPRDGGTFISAQTTEATGLDPQLVPAFSR
Ga0190265_102863661	3300018422	Soil	MPNDHGSPRSHLSRRQLLTAGGLTLGALAVGRRAAAQTPKPGGTLISAQATEATGLDPQLVPALSRSRRSP
Ga0066667_122393192	3300018433	Grasslands Soil	MTNDREHSNPAGLTRRQLLKIGGATLGALSVGRQAWAQAPKPGGGFISAQTTEATGLDPQLVPALSRS
Ga0190268_112763342	3300018466	Soil	MPTSLTRRQLLQAGGLTLGTLSLGRSAFGQAPRDGGTFVSPRTAEATGLEPQLVPAFSRSARSPLMYNQL
Ga0190270_117827492	3300018469	Soil	MISKLSRRQLLQASGLTLGSLALGRPAFGQTPKAGGTFVSARTTEATGLDPQLV
Ga0066669_103533503	3300018482	Grasslands Soil	MTTRHPGSDSTRLSRRALLTTGGAALAALSLGRSAQAQAPKPGGTFVSAQTTEATGLDPQLVPAFSRSRR
Ga0066669_105644972	3300018482	Grasslands Soil	MTTSMTRRQLLQAGGLTLGGLSLGPHALAQTPREGGTFVSARTTEATGLDPQLVPAFSRSARSPM
Ga0247793_10125871	3300023066	Soil	MTIDHTSDALRLSRRQILKAGGLTLGALAVGRPAAAQTPKPGGTLISAQATEATGLDPQLVPALS
Ga0207653_102450172	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPASLTRRQLLQASGLTLGALSLGRSAFGQTPKDGGTFISARTTEATGLDPQLVPAFS
Ga0207684_108558042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDREDSNPAGLTRRQMLKVAGVTLGALSAGRQAWAQAPKPGGSFVSAQTTEATGLDPQLVP
Ga0207670_102564313	3300025936	Switchgrass Rhizosphere	MTNHPEPSDFSRLSRRDALKLGGAALGTLALSTQAFAQTPKPGGSFISAQTTEATGLDPQLVPALSRSR
Ga0207648_118162172	3300026089	Miscanthus Rhizosphere	MPTDPRLLDGRHFTRREVLKAAALAAGALGVARPALAQAPPKQGGVLISAQTTEATGLDPQLVPALSRSR
Ga0209055_12728751	3300026309	Soil	MTASLTRRQLLQAGGLTLGALSLGRHAAGQAPKDGGTFTSARTTEATGLDP
Ga0209239_10217011	3300026310	Grasslands Soil	MTTMTRRRLLQAGGLTLGALALPRPVHAQTPKAGGTFVTARTTEATGLDPQLVPAFSRSARS
Ga0209375_100540011	3300026329	Soil	MTTMTRRRLLQGGGLTLGALALPRPVHAQTPKAGGTFVTARTTEATGLDPQLV
Ga0209377_11253892	3300026334	Soil	MTTMTRRRLLQAGGLTLGALALDRRAHAQAKAGGTFVTARTTEATGLDPQLVPAF
Ga0257159_10858242	3300026494	Soil	MTTDRERPNSNGLTRRQLLKLSGATLGALSLGRPAWAQTPKPGGSLISAQTNEATGLDPQLVPALSRSR
Ga0209056_103334812	3300026538	Soil	MTASLTRRQLLQAGGLTLGALSLGRPALGQTPKDGGTFISARTTEATGLDPQLVPA
Ga0209648_103086561	3300026551	Grasslands Soil	MTIDSGPIDSSRLSRRQLLQAGGLALGALAVGRPAAAQAPRPGGSLISAQATEATGLDPQLVPALSRSRR
Ga0207444_10115871	3300026900	Soil	MPASLTRRQLLQASGLTLGALSLGRSAFGQTPKDGGTFISARTTEATGLDPQLVPAFSRS
Ga0207459_1061981	3300027481	Soil	MPASLTRRQLLQASGLTLGALSLGRSAFGQTPKDGGTFISARTTEATGLDPQLVPA
Ga0209465_102878491	3300027874	Tropical Forest Soil	MTTDSGHADPLALTRRQLLKAAGLAAGALSLPRPALAQAPKPGGTFISAQNNEATGLDPQLVPAFSRSR
Ga0209481_100434461	3300027880	Populus Rhizosphere	MSQLTRRHVLKTAGLTAGAFAFPRRGSAQTKPGTLISAQTTEATGLDPQLVPALSRSRRSPLTYN
Ga0207428_102987112	3300027907	Populus Rhizosphere	MTSSLTRRQLMQAAGLTLGSLAVGRTALGQTPKEGGTFVSARTTEATGLDPQLVPAFSRSARSPLMYN
Ga0268265_102062393	3300028380	Switchgrass Rhizosphere	MPIDHGSPRSHLSRRQLLKAGGLTLGALAVGRRAAAQSPKPGGSLISAQATEATGLDPQLVPALSRSR
Ga0268265_124442121	3300028380	Switchgrass Rhizosphere	MTIPRRPSDVTRLTRRELLQAGGLALGALTVGTPALGQTPRSGGTLISAQSTEATGLDPQLVPAFSRS
Ga0247824_102637081	3300028809	Soil	MTSSLTRRQLMQAAGLTLGSLAVGRTALGQTPKEGGTFVSARTTEATGLDPQLVPAFSRSAR
Ga0307296_105324171	3300028819	Soil	MTHALTRRQLMQAGGLTLGTLALGRSAFGQTPKDGGTFISARTTEATGLDPQLVPAFSRS
Ga0307310_102292352	3300028824	Soil	MRNDHTSPRSHLSRRQLLKAGGLTLGALAVGRHAGAQTPKPGGTLISAQATEATGLDPQLVPALSRS
Ga0307312_102684151	3300028828	Soil	MSKNITSSLSRRQLLKAGGLTLGALAVGRRAAAQTPRPGGTLVSAQATEATGLDPQLV
Ga0247827_100807344	3300028889	Soil	MTSSLTRRQLMQAAGLTLGSLAVGRTALGQTPKEGGTFVSARTTEATGLDPQR
Ga0299907_101308181	3300030006	Soil	MPTSLTRRKLLQASGLTLGALALGRPAFGQAPKPGGTFVSARTTEATGLDPQLVPAFSRSARSPLM
(restricted) Ga0255311_10287691	3300031150	Sandy Soil	MSQLTRRQLLKSAGLTAGAFTLPRRAGAQTKPGTLISAQTTEATGLDPQLVPALSRSRR
Ga0299913_118933822	3300031229	Soil	MTNDERRITSHLTRRRLLQTGALAAGALAVPRAARAQSPKPGGTFVSAQTTEATGLDPQLVPAFSRS
Ga0307505_103259902	3300031455	Soil	MTHLTRRQLLQAGGLTLGALSLGRPAPALGQTPKPGGSFVSGRTTEATGLD
Ga0307468_1020689961	3300031740	Hardwood Forest Soil	MTASLTRRQLLQAGGLTLGALSLGRHAAGQTPKEGGTFTSARTTEATGLDPQLVPAFSRSARSP
Ga0318498_105273091	3300031778	Soil	MSELTRRQLLKSAGLTAGAFAIPRRAAAQAKPGTLISAQTTEATGLDPQLVPALSRSRRSPLT
Ga0306923_104132733	3300031910	Soil	MSQLTRRQVLKTAGLTAGAFAFPRRALAQTKSGTLITAQTTEATGLDPQLVPALSRSRRSPLTYNQ
Ga0310913_102497051	3300031945	Soil	MSELTRRQLLKSAGLTAGAFAIPRRAAAQAKPGTLISAQTTEATGLDPQLVPALSRSRRSPL
Ga0318513_100963893	3300032065	Soil	MSELTRRQLLKSAGLTAGAFAIPRRAAAQAKPGTLISAQTTEATGLDPQLVPALSRSRRSPLTYNQ
Ga0310890_100699401	3300032075	Soil	MSQLTRRQVLKSAGLTAGAFAFPRRGAAQTKPGTLISAQTTEATGLDPQLVPALSRSRR
Ga0307470_104018522	3300032174	Hardwood Forest Soil	MTNDHGTSRSHLSRRQLLKAGGLTLGALAVGRRAAAQTPKPGGTLISAQATEATGLDPQLVPALSRSRRS
Ga0307470_109866382	3300032174	Hardwood Forest Soil	MTNRPQPSELSHLSRRDALKLGGAALGTLAFGSQAFAQTPKSGGSFVSAQTTEATGLDPQLVPALSRSRR
Ga0307471_1011547311	3300032180	Hardwood Forest Soil	VSHLTRRQLLKSAGLTAGAFALPRRAAAQTKPGTLISAQTTEATGLDPQLVPALSRSRRSPLT
Ga0307471_1012782971	3300032180	Hardwood Forest Soil	MTTSMTRRQLLQASGLALGGLSLGRHALGQTPREGGTFTSARTTEATGLDPQLVPAFSRSARSPMMYN
Ga0307471_1037135502	3300032180	Hardwood Forest Soil	MAIRHRPFDVTHDVTRLTRRELLKAGGLALGALTVGTPALGQTPRSGGTLISAQTTEATGLDPQIVPAFS
Ga0307471_1038147192	3300032180	Hardwood Forest Soil	MTTMTRRRLLQAGGLTLGALALPRPVHAQAPKAGGTFVTARTTEATGLDPQLVPA
Ga0334722_109507661	3300033233	Sediment	MTTDREHTDPTRLSRRDVLKIGGATLGALSVGTRAWAQAPKPGGSFVSAQSTEATGLDPQLVP
Ga0318519_103421731	3300033290	Soil	MSELTRRQLLKSAGLTAGAFAIPRRAAAQAKPGTLISAQTTEATGLDPQLVPALSRSR
Ga0316626_107732012	3300033485	Soil	MPTSLTRRQLLQAGGLTLGALSLGRNALGQTPRAGGTFVSARTTEATGLDPQLVPAFSRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters