NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F070977

Metagenome Family F070977

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070977
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 98 residues
Representative Sequence MPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVLQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDKFSIKGY
Number of Associated Samples 79
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.87 %
% of genes near scaffold ends (potentially truncated) 35.25 %
% of genes from short scaffolds (< 2000 bps) 78.69 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (67.213 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(27.869 % of family members)
Environment Ontology (ENVO) Unclassified
(30.328 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.443 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.
1E41_10489170
2F62_03498000
3deepsgr_03260000
4F14TC_1004676552
5AF_2010_repII_A01DRAFT_10000414
6AF_2010_repII_A1DRAFT_100089901
7JGI1027J12803_1003198622
8JGI1027J12803_1036422673
9JGI25405J52794_101276762
10Ga0066395_100184241
11Ga0065705_105848831
12Ga0066388_1000800475
13Ga0066388_1008838101
14Ga0066388_1011809221
15Ga0066388_1018358542
16Ga0066388_1029999381
17Ga0066905_1000115532
18Ga0066905_1000861804
19Ga0066905_1002044213
20Ga0066905_1008288491
21Ga0066905_1017387241
22Ga0066905_1018796491
23Ga0066903_1010668113
24Ga0066903_1017825511
25Ga0066903_1036155822
26Ga0066903_1050242971
27Ga0081455_100460584
28Ga0081455_100882294
29Ga0081540_100658415
30Ga0075417_100095682
31Ga0075417_100555591
32Ga0075417_104627782
33Ga0075026_1007464642
34Ga0075428_1000285223
35Ga0075428_1000412127
36Ga0075428_1002375083
37Ga0075428_1002758013
38Ga0075421_1001306502
39Ga0075421_1025258792
40Ga0075430_1004389741
41Ga0075431_1002582145
42Ga0075431_1018380812
43Ga0075420_1002112902
44Ga0075420_1009086823
45Ga0075434_1000885642
46Ga0075429_1009696162
47Ga0075419_100129431
48Ga0114129_103702483
49Ga0114129_112599652
50Ga0114129_131836462
51Ga0111538_105977343
52Ga0111538_108851852
53Ga0111538_124894081
54Ga0075423_112043972
55Ga0126380_1000170212
56Ga0126380_105149942
57Ga0126380_110960882
58Ga0126380_113848781
59Ga0126384_100544493
60Ga0126382_100211483
61Ga0126382_104602652
62Ga0126382_107015842
63Ga0126377_103079992
64Ga0126377_114430681
65Ga0126377_121853071
66Ga0126381_1001249192
67Ga0134124_104055632
68Ga0134123_106975761
69Ga0124850_10125923
70Ga0137364_110630631
71Ga0137382_107950302
72Ga0157345_10220601
73Ga0126375_111539232
74Ga0126375_116482461
75Ga0126375_116784622
76Ga0164299_111585462
77Ga0164306_104055723
78Ga0164305_107617221
79Ga0157379_111097152
80Ga0132256_1000522092
81Ga0132257_1002091402
82Ga0187785_102195971
83Ga0190266_112430622
84Ga0184605_105064002
85Ga0184608_103045081
86Ga0184621_101403061
87Ga0184635_100714532
88Ga0184625_105805791
89Ga0193734_10620902
90Ga0210380_104674851
91Ga0222621_10621422
92Ga0126371_106375662
93Ga0126371_112022172
94Ga0222623_101480122
95Ga0222622_109633591
96Ga0209814_100010924
97Ga0209814_100954772
98Ga0209814_103537841
99Ga0209814_103631661
100Ga0209481_105146282
101Ga0209481_105245772
102Ga0207428_100530065
103Ga0209382_100052747
104Ga0209382_105944521
105Ga0209382_121693361
106Ga0307295_100861231
107Ga0307280_102586161
108Ga0307290_100698171
109Ga0307305_102059001
110Ga0307289_103178141
111Ga0307498_100102571
112Ga0307498_100129321
113Ga0307497_100805902
114Ga0170824_1030542093
115Ga0318534_106938632
116Ga0318541_100062228
117Ga0307469_120632212
118Ga0318535_105115841
119Ga0318529_101801542
120Ga0318544_100786091
121Ga0318504_103777511
122Ga0326726_114150262
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 24.43%    β-sheet: 0.00%    Coil/Unstructured: 75.57%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVLQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDKFSIKGYSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
32.8%67.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Watersheds
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Switchgrass Rhizosphere
Soil
Grass Soil
Soil
Forest Soil
Hardwood Forest Soil
Tropical Peatland
Soil
Tropical Forest Soil
Peat Soil
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Arabidopsis Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
4.1%10.7%13.9%4.9%13.9%3.3%27.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_104891702170459005Grass SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVPQPKSAPDALAKIGRVARAARAEAPPKNNRVS
F62_034980002170459010Grass SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVPQPKSAPDALAKIGKLARAARAEAPPKNNRVSQTLNYQVTPLLGRFSIKDY
deepsgr_032600002199352025SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAKIGRVARAARAEAPPKNNRV
F14TC_10046765523300000559SoilMPALSFLVFVGLALITLLFFGKATLEPISSEIVATHHAVSAAPVPNMTSQVVLEPKLAPDALARIEPAXXXXXPEARNNRVTRSIGYEQTSVFDRFSIKGY*
AF_2010_repII_A01DRAFT_100004143300000580Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVVSQPQSIPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY*
AF_2010_repII_A1DRAFT_1000899013300000597Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY*
JGI1027J12803_10031986223300000955SoilMPALSFLAFVGLALIALLFYGNATLEPISPHLVTTHHAVAPAVPAPNVTAQVAPQPQSAPDALAKNWHAARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
JGI1027J12803_10364226733300000955SoilMPALSFLVFVGLALITLLFFGKATLEPVSPEIVTTHHAVSAAPVPNMTSQVVLQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY*
JGI25405J52794_1012767623300003911Tabebuia Heterophylla RhizosphereMPALSFLAFVGLALIALLFYGNGTLEPISPETVTTHYAVAPPPNMTSQEVSQPKSPPDALAKIGHVARAARAEAPNRRVTHTNYQETPFFDRFSIKG
Ga0066395_1001842413300004633Tropical Forest SoilLAFVGLALIALLFYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVVSQPQSIPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0065705_1058488313300005294Switchgrass RhizosphereMPALSFLVFVGLALIALLFFGKATLEPVSPEMVTVHHASPAPAPNLTSQVVLQPKSAPDALAKIGHVARAARAEANNRTRSIGCERTSFFDRFSIKGY*
Ga0066388_10008004753300005332Tropical Forest SoilMPALSFLAFVAFGLVALLFVGNATLEPTSPEKVTTHHAVAPTPAPPLTSQVVQPKSPDALAKIGHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0066388_10088381013300005332Tropical Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAAAPAPAPNMTSQVALQPNSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0066388_10118092213300005332Tropical Forest SoilLLFYADATLEPISPSFVMSHQTVAPAPVAAPQATSQVGLQPKSAPDALAKIGHAARTARAEARPKNNRVSQNYQATPLLDRFSIKGY*
Ga0066388_10183585423300005332Tropical Forest SoilALSFLAFVAFGLVALLFVGNATLEPTSPAIVTTHHTVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0066388_10299993813300005332Tropical Forest SoilMPALSFLAFVALGLVALLFVGNATLEPTSPAIVTTHHSVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0066905_10001155323300005713Tropical Forest SoilMPALSFLAFVGLALIAFLFYGNATLEPISPEIITTRHAVAPAPAPNMISQAVLAAQPAPDALKKIHPAARAARAEASHYRGWFRHQQQSQFDRFSIKGY*
Ga0066905_10008618043300005713Tropical Forest SoilMPALSFLAFVGLALIAFLFYGNASLEPVSPEKVATHHAVAPVPNMTSQVALQPKSAPDEKIGHIARAARAEAPNRRVTQHSNYQQTPFFDRFSIKGY*
Ga0066905_10020442133300005713Tropical Forest SoilMKMSFMTGGLALIAFLFYGNATLEPISPETVTTHHAAAPTPALNVTSQVSLQPESAPDAPAKIGHVARAARAEAPNRRVTQHTNYQQTPFFDRFSIKGY*
Ga0066905_10082884913300005713Tropical Forest SoilMPALSFLAFVGLALITLLFFGKATVEPVSPEIVTSHHAVAPAPAPNMTSHVQPKSAPDALAKIGHVARAARAEAPNNRVTQHIGYQRSQFDRFSIKGY*
Ga0066905_10173872413300005713Tropical Forest SoilMPALSFLAFVGLALIALLFFGNATLEPISPETVVTHHAVAPAPASNMTSQVVVQPKSAPDTLANIGHVARSARAETSRSRAWFRYQQQSQFDRFSIKGY*
Ga0066905_10187964913300005713Tropical Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPETVTTHYAVAPPPNMTSQEVSQPKSPPDALAKIGHVARAARAEAPNRRVTHTNYQQTPFFDRFSIKG
Ga0066903_10106681133300005764Tropical Forest SoilMPALSFLAFVGLALVALLFFGKATLEPVTPEIVTTHHAVAPAPAPNLTSQVVLQPKPAADALAKIGHVARGARAEANNRVSRSIAYQRTSFYDRFSIKGY*
Ga0066903_10178255113300005764Tropical Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPDLVTTHHAVAPAPNMTPQVVSQPQLAPDALAKIGREARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0066903_10361558223300005764Tropical Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPAPVTLAPTVTAQTVPQPQPAPDAVAEIGRAARAARAEAPPKNKRVSQTLNYQVTPLLDRFSIKGY*
Ga0066903_10502429713300005764Tropical Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPAPVTLAPNVTAQPVPQPQPAPDAVAEIGRAARAARAEAPPKNKRVSQTLNYQVTPL
Ga0081455_1004605843300005937Tabebuia Heterophylla RhizosphereMPALSFLTFVGLAVIALLFFGKATLEPVTPEIVTTHHVVAPALAPNLTSQVVQPQSAPDARAKIGHVARAARAEVNNRVSRSNPYERTSFFDRFSIKGY*
Ga0081455_1008822943300005937Tabebuia Heterophylla RhizosphereMPALSFLAFVGLALIALLFYGNGTLEPISPETVTTHYAVAPPPNMTSQEVSQPKSPPDALAKIGHVARAARAEAPNRRVTHTNYQQTPFFDRFSIKGY*
Ga0081540_1006584153300005983Tabebuia Heterophylla RhizosphereMPALSFLTFVGLALIAFLFYGNATMEPISPEIVTTHHAAAPALAPNLTSQVALQSESAPDAPAKIGHVARAARAEAPNRRVTQHTNYQQTPFFDRFSIKGY*
Ga0075417_1000956823300006049Populus RhizosphereMPALSFLTFVGLAVIAFLFFGKATLEPVSPERGTSHYAVAPAPAPNLTSQVVLQPKPEPEALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKGY*
Ga0075417_1005555913300006049Populus RhizosphereMPALSFLTFVGLAVIALLFFGKATLEPVSPEIVTIHHAVVPAPVPNLTSQAVLQPKSAPDALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKGY*
Ga0075417_1046277823300006049Populus RhizosphereCLGTRSWNVAMPALSFLAFVGLALIALLFFGNATLESVSPEVVTTHHAVAPAPAPNITSQVVLQPKSAPDALARIGPAARAARAEARNNRVTRFNGYEQTSLFDRFSIKGY*
Ga0075026_10074646423300006057WatershedsMPALSFLAFVGLALIALLFYGNATLEPISPKIGTLRNAVAPAPNVTSQVILQPGSPPDALAKIGHVARVARAEAPPKNSRVSPLNYQVTPLLDRFSIKGY*
Ga0075428_10002852233300006844Populus RhizosphereMPALSFLVFVGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY*
Ga0075428_10004121273300006844Populus RhizosphereMPALSFLAFVGLALITLLFFGKATLEPVSPEIVTTHHAVAPAPAPNLTSQVVLKPAPDALAKIGHVARAARAEANNRSRSIGYERTSFFDRFSIKGY*
Ga0075428_10023750833300006844Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALAKIGHVARAARAEANNRVTRSIGYERTSFFERFSIKGY*
Ga0075428_10027580133300006844Populus RhizosphereMPALSFLAFVGLALIALLFFGNATLESVSPEVVTTHHAVAPAPAPNITSQVVLQPKSAPDALARIGPAARAARAEARNNRVTRFNGYEQTSLFDRFSIKGY*
Ga0075421_10013065023300006845Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALVKIGHVARAARAEANNRVTRSIGYERTSFFERFSIKGY*
Ga0075421_10252587923300006845Populus RhizosphereMPALSFLVFVGLALITLLFFGKATLEPVSPEIVTTHHAVSAAPAPNMTSQVVLQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY*
Ga0075430_10043897413300006846Populus RhizosphereIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY*
Ga0075431_10025821453300006847Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALAKIGHVARAARAEANNRVTRSIGYERTSFFDRFSIKGY*
Ga0075431_10183808123300006847Populus RhizosphereMPALSFLAFVGLALIALLFYGNGTLEPISPETVTTHYAVAPPPNMTSQEVSQPKSPPDALAKIGHVARAARAEAPNRRVTHTNYQQTPFFDNFY
Ga0075420_10021129023300006853Populus RhizosphereMPALSFLVFLGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY*
Ga0075420_10090868233300006853Populus RhizosphereMPALSFLAFVGLALIALLFFGNATLESVSPEVVTTHHAVAPAPAPNITSQVVLQPKSAPDALARIGPAARAARAEARNNRVTR
Ga0075434_10008856423300006871Populus RhizosphereMPALSFLVFVGLALITLLFFGKATLEPVSPEIVTHHAVSAAPAPNMTSQVVLQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY*
Ga0075429_10096961623300006880Populus RhizospherePALSFLVFVGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY*
Ga0075419_1001294313300006969Populus RhizosphereMPALSFLTFVGLAVIAFLFFGKATLEPVSPERGTSHYAVAPAPAPNLTSQAVLQPKPEPEALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKGY*
Ga0114129_1037024833300009147Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALVKIGHVARAARAEANNRVTRSIGYERTSFFDRFSIKGY*
Ga0114129_1125996523300009147Populus RhizosphereMPALSFLTFVGLAVIAFLFFGKATLEPVSPERGTSHYAVAPAPAPNLTSQVVLQPKPEPEALAKIGHVARAARAEANNRTRSISYERTSFFDRFSIKGY*
Ga0114129_1318364623300009147Populus RhizosphereMPALSFLAFVGLALIALLLYGNGTLEPISPEAVTTHYVAPPPAPNMTSQEVSQPKSPPDALAKIGHVARAARAEAPNRRVTHTNYQQTPFFDRFSIKGY*
Ga0111538_1059773433300009156Populus RhizosphereITLLFFGKATLEPVSPEIVTHHAVSAAPAPNMTSQVALQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY*
Ga0111538_1088518523300009156Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALVKIGHVARAARAEANNRVTRSIGYERTSFFERFSIKDIKLDHGFCRAHSL*
Ga0111538_1248940813300009156Populus RhizosphereMPALSFLTFVGLAVIALLFFGKATLEPVSPEIVTIHHAVVPAPVPNLTSQAVLQPKSAPDALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKG
Ga0075423_1120439723300009162Populus RhizospherePALSFLVFVGLALITLLFFGKATLEPVSPEIVTTHHAVSAAPAPNMTSQVVLQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY*
Ga0126380_10001702123300010043Tropical Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPISPETVTTHYAVAPAPAPNMTSQGVSQPKSAPDTLAKIGHVARAARAEAPNRHVNYQQTPFFDRFSIKGY*
Ga0126380_1051499423300010043Tropical Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVVSQPQSTPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0126380_1109608823300010043Tropical Forest SoilAFVAFGLVALLFVGNATLEPTSPAIVTTHHTVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0126380_1138487813300010043Tropical Forest SoilGSAIAMPALSFLAFVGLALVALLFFGKATLEPVTPEIVTTHHAVAPAPAPNLTSQVVLQPKPAADALAKIGHVARGARAEANNRVSRSIAYQRTSFYDRFSIKGY*
Ga0126384_1005444933300010046Tropical Forest SoilMPALSFLAFVGLALITLLFFGIATVEPVSPEIVTSHHAVAPAPAPNMTSHVQPKSAPDALAKIGHVARAARAEAPNNRVTQHIGYQRSQFDRFSIKGY*
Ga0126382_1002114833300010047Tropical Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVVSQPQSAPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0126382_1046026523300010047Tropical Forest SoilMPALSFLAFVGLALIAFLFYGNASLEPVSPEKVATHHAVAPAPAPKKTSEVVLQPTSAPDEKIGHVARAARAEAPNRRVTQHSNYQQTPFFDRFSIKGY*
Ga0126382_1070158423300010047Tropical Forest SoilMPALSFLAFVAFGLVALLFVGNATLEPTSPAIVTTHHSVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0126377_1030799923300010362Tropical Forest SoilMPALSFLAFVGLAVIAFLFYGNALEPISPETVTTHHAVAPAPAPKKTSEVVLQPTSAPDEKIGHVARAARAEAPNRRVTQHTNYQQTPFFDRFSIKGY*
Ga0126377_1144306813300010362Tropical Forest SoilMPALSFLAFVAFGLVALLFVGNATLEPTSPAIVTTHHTVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERT
Ga0126377_1218530713300010362Tropical Forest SoilMPALSFLAFVGLALIAFLFYGNATLEPISPEKVTTHHAVAPAPAPNVTSQLALQPKSAPLANIGHVARAARAEAPNRRVTQ
Ga0126381_10012491923300010376Tropical Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPHIVTTHHAIAPAAPAPNMTAQVASQPQSIPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0134124_1040556323300010397Terrestrial SoilMRALSFLAFVGLALIALLFYGNATLEPISPKIVTPHHAVAPAPVSNTTSQAVPQPESAPDALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0134123_1069757613300010403Terrestrial SoilMPALSFLAFVGLALIALLFYGNAMLEPISPHLVTTHHAVAPATPAPNVTAQVALQPQSAPDALSTIGHAARAARAEAPPKNKRVSQTLNYQVTPLMDRFSIKGY*
Ga0124850_101259233300010863Tropical Forest SoilMPALSFLAFVGLALIALLSYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVVSQPQSAPDALTKIGHAARAARAEAHKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0137364_1106306313300012198Vadose Zone SoilMPALSFLAFVGLALIALLFYGNAALEPISPEIVTTHHAVAPAPAPNMTLQVVPQPKSAPDALAKIGHVARAARAEAPPKNNCVSQTLNYQVTPLLDRFSIKGY*
Ga0137382_1079503023300012200Vadose Zone SoilMPALSFLAFVGLALIALPFYGNATLEPISPEIVTPHHAVAPAPNMTSQVVLQPKSAPDALAKIGQVARAARAEAPPKNNRVSQTLNYQPLLDRFSIKGY*
Ga0157345_102206013300012498Arabidopsis RhizosphereGFALIALLFYGNATLEPISPALVTTHHAVEPATAAPNVAQVATQPQSAPDALSTIGHAARAARAEAPPKNKRVSQTLNYQVTPLMDRFSIKGY*
Ga0126375_1115392323300012948Tropical Forest SoilMPALSFLAFVAFGLVALLFVGNATLEPTSPEKVTTHHSVAPAPAPNLTSQVAEPKSAPDALAKIRHAARAARAEVPKNRFTWSRNYERTSFFDRFSLKNN*
Ga0126375_1164824613300012948Tropical Forest SoilMPALSFLAFVGLALIALLFYGNGTLEPISPETVTTHYAVAPAPNMTSQGVSQPKSAPDTLAKIGHVARAARAEAPNRHVNYQQTPFFDRF
Ga0126375_1167846223300012948Tropical Forest SoilMPALSFLAFVGLAVIAFLFYGNALEPISPETVTTHHAVAPAPAPKKTSEVVLQPTSAPDEKIEHVARAARAEAPNRRVTQH
Ga0164299_1115854623300012958SoilMPALSFLAFVGLAVIALLFYGNATLEPISPEMVATHHSVAPAPNMTSQVVPQAKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0164306_1040557233300012988SoilAFVGLAVIALLFYGNATLEPISPEIVTTHHAVAPAPNMTSQVAPQAKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0164305_1076172213300012989SoilFLAFVGLAVIALLFYGNATLEPISPEIVATHHAVAPAPDMTSQVVPQAKSAPDALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0157379_1110971523300014968Switchgrass RhizosphereLLFYGNATLEPISPKIVTPHHAVAPAPVSNTTSQAVPQPESAPDALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0132256_10005220923300015372Arabidopsis RhizosphereMPALSFLAFVGLALIALLFYGNATLEPISPKIVTPHHAVAPAPVSNTTSQAVLQPESAADALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKDY*
Ga0132257_10020914023300015373Arabidopsis RhizosphereMPALSFLAFVGLALIALLFYGNATLEPISPKIVTPHHAVAPAPVSNTTSQAVPQPESAPDALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY*
Ga0187785_1021959713300017947Tropical PeatlandMPALFFLAFVGLALIALLFYGNATLEPISPDLVTAHRAVAPARNTIPQVVSQPQLAPDALAKIGRQARAARAEVPYKNNRVSQTLNYQVTPVLDRFSIKGY
Ga0190266_1124306223300017965SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVLQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDKFSIKGY
Ga0184605_1050640023300018027Groundwater SedimentMPALSFLAFVGLALIAWLFYGNATLEPNSSEIVTTHHAVAPAPVPNMTSQVVPQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0184608_1030450813300018028Groundwater SedimentMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0184621_1014030613300018054Groundwater SedimentMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0184635_1007145323300018072Groundwater SedimentMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPGALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0184625_1058057913300018081Groundwater SedimentLVTHFGISTPTDATLEPISPEIVTTHHAVAPAPAPNMTLQVVPQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKDY
Ga0193734_106209023300020015SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLD
Ga0210380_1046748513300021082Groundwater SedimentLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0222621_106214223300021510Groundwater SedimentMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKDY
Ga0126371_1063756623300021560Tropical Forest SoilVMPALSFLAFVGLALIALLFYGNGTLEPHIVTTHHAVAPAAPAPNMTAQVASQPQSIPDALTKIGHAARAARAEAPHKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0126371_1120221723300021560Tropical Forest SoilLAFVGLALIALLFYGNATLEPISPKLVTTHHAVPAATDMTAQVVSPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0222623_1014801223300022694Groundwater SedimentMPALSFLAFVGLALITFLFFGKATLEPVLPEIVTTHHAVAPAPAPNMNSQVVLQPKSAPDPLAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0222622_1096335913300022756Groundwater SedimentMPALSFLAFVGLALIALLFYGNATLEPISSEIVATHHAVAPAPVPNMTSQVVPQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0209814_1000109243300027873Populus RhizosphereMPALSFLTFVGLAVIAFLFFGKATLEPVSPERGTSHYAVAPAPAPNLTSQVVLQPKPEPEALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKGY
Ga0209814_1009547723300027873Populus RhizosphereMPALSFLTFVGLAVIALLFFGKATLEPVSPEIVTIHHAVVPAPVPNLTSQAVLQPKSAPDALAKIGHVARAARAEANNRTRSIGYERTSFFDRFSIKGY
Ga0209814_1035378413300027873Populus RhizosphereECLGTRSWNVAMPALSFLAFVGLALIALLFFGNATLESVSPEVVTTHHAVAPAPAPNITSQVVLQPKSAPDALARIGPAARAARAEARNNRVTRFNGYEQTSLFDRFSIKGY
Ga0209814_1036316613300027873Populus RhizosphereMPALSFLVFVGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYER
Ga0209481_1051462823300027880Populus RhizospherePALSFLVFVGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY
Ga0209481_1052457723300027880Populus RhizosphereMPALSFLAFVGLALIALLFFGNATLESVSPEVVTTHHAVAPAPAPNITSQVVLQPKSAPDALARIGPAARAARAEARNNRVTRFNGYEQTSLFDRFSIKGY
Ga0207428_1005300653300027907Populus RhizosphereMPALSFLAFVGLALITLLFFGKATLEPVSPEIVTTHHAVAPAPAPNLTSQVVLKPAPDALAKIGHVARAARAEANNRSRSIGYERTSFFDRFSIKGY
Ga0209382_1000527473300027909Populus RhizosphereMPALSFLVFVGLALIAFLFYGKATLEPVTPEIVTTHHAAAPAPAPNLTSQVVQPKSAPDALAKIGHVARTARAEANNRVTRSIGYERTSLFDRFSIKGY
Ga0209382_1059445213300027909Populus RhizosphereMPALSFLAFVGFALIGLLFFGKATLEPVSPEIITTHHAIAPAPNLTTQVVLQPKSPPDALVKIGHVARAARAEANNRVTRSIGYERTSFFERFSIKGY
Ga0209382_1216933613300027909Populus RhizosphereMPALSFLVFVGLALITLLFFGKATLEPVSPEIVTTHHAVSAAPAPNMTSQVVLQPKLAPDALARIGPAARAARAEARNNRVTRSIGYEQTSVFDRFSIKGY
Ga0307295_1008612313300028708SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKDY
Ga0307280_1025861613300028768SoilLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0307290_1006981713300028791SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIK
Ga0307305_1020590013300028807SoilIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0307289_1031781413300028875SoilALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPNALAKIGQVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0307498_1001025713300031170SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVPQPKSAPDALAKIGRVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKDY
Ga0307498_1001293213300031170SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVVPQPKSAPDALAKIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0307497_1008059023300031226SoilMPALSFLAFVGLALIALLFYGNATLEPISPEIVTTHHAVAPAPAPNMTSQVVPQPKSAPDALAKIGKLARAARAEAPLKNNRVSQTLNYQVTPLLGRFSIKDY
Ga0170824_10305420933300031231Forest SoilMPALSFLAFVGLALIALLFYGNATLEPISPEMVTPHHVVAPAPNMTSQVELQPKSAPDALAEIGHVARAARAEAPPKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0318534_1069386323300031544SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPPSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0318541_1000622283300031545SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0307469_1206322123300031720Hardwood Forest SoilLIALLFYGNATLEPISPEIVTTHHAVAPAPNMTSQVAPQAKSAPDALAKIGQVARAARAEAPPKNYRVSQTLNYQVTPLLDRFSIKGY
Ga0318535_1051158413300031764SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATNMTAQVVPPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDRFSIKGY
Ga0318529_1018015423300031792SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQ
Ga0318544_1007860913300031880SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPPSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQVTPLLDR
Ga0318504_1037775113300032063SoilMPALSFLAFVGLALIALLFYGNATLEPISPKLVTTHHAVAPAATDMTAQVVPPPQSAPDALAKIGHAARAARAEAPRKNNRVSQTLNYQV
Ga0326726_1141502623300033433Peat SoilMPALSFLAFVGLAVIALLFYGNATLERISPEKVTTHHAVAPAPAPNITSQVVLQPKSAPDALAKIGPVARAARAEAPAEAPPKNNRVSQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.