Metagenome Family F070809

Basic Information
Family ID	F070809
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	47 residues
Representative Sequence	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDEVLAKY
Number of Associated Samples	82
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.82 %
% of genes near scaffold ends (potentially truncated)	38.52 %
% of genes from short scaffolds (< 2000 bps)	77.05 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (59.016 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (55.738 % of family members)
Environment Ontology (ENVO)	Unclassified (95.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.705 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1TB18AUG2009E_0028356 2TBL_comb48_EPIDRAFT_10195638 3TBL_comb48_EPIDRAFT_10280532 4Ga0007811_10032764 5Ga0007811_10063583 6Ga0007865_10032994 7Ga0007865_10073402 8Ga0007846_10084363 9Ga0007842_10007851 10Ga0007879_10053073 11Ga0007877_10063324 12Ga0007863_10036054 13Ga0007863_10105881 14Ga0007863_10162172 15Ga0007875_10037394 16Ga0007880_10043043 17Ga0065173_10300621 18Ga0065176_10242671 19Ga0065171_10065472 20Ga0065170_10375643 21Ga0007791_100200142 22Ga0007827_100120514 23Ga0007809_100133903 24Ga0007809_100234571 25Ga0007809_100321341 26Ga0007809_100366062 27Ga0007809_101950542 28Ga0007876_10623652 29Ga0007876_11067581 30Ga0007876_11496512 31Ga0007862_10260891 32Ga0007862_10491902 33Ga0007862_11008572 34Ga0007857_100085121 35Ga0007816_10741911 36Ga0007859_10268982 37Ga0007866_10235913 38Ga0007824_10164752 39Ga0007824_10253211 40Ga0007828_10717151 41Ga0114962_102359601 42Ga0114962_105301971 43Ga0114963_101794613 44Ga0114964_106245981 45Ga0136644_101409993 46Ga0136644_102307102 47Ga0133913_108586566 48Ga0133913_119070511 49Ga0164296_100184730 50Ga0164296_12416742 51Ga0164296_14010012 52Ga0164297_100267712 53Ga0164297_101119182 54Ga0164297_103363431 55Ga0164297_103370941 56Ga0214190_10179843 57Ga0214177_10110133 58Ga0214207_10090322 59Ga0214178_10075684 60Ga0214178_10086051 61Ga0214178_10214361 62Ga0214246_10358412 63Ga0214219_10550341 64Ga0214211_10176491 65Ga0214193_10106724 66Ga0214206_10017769 67Ga0214175_10186433 68Ga0214167_10339882 69Ga0214166_10478221 70Ga0214166_10793042 71Ga0214166_10883211 72Ga0214192_10066671 73Ga0248169_10009950 74Ga0208619_1011262 75Ga0208619_1074771 76Ga0208502_10026841 77Ga0208502_10042071 78Ga0208383_10017917 79Ga0208383_10098882 80Ga0208383_10312611 81Ga0208504_10314322 82Ga0208382_10062187 83Ga0207957_10055272 84Ga0208738_10139413 85Ga0208256_10261192 86Ga0208257_10067971 87Ga0208257_10315783 88Ga0208380_10161741 89Ga0208380_10169892 90Ga0208251_10202394 91Ga0207955_10240133 92Ga0207955_10524883 93Ga0208745_10042723 94Ga0208253_10006453 95Ga0208500_10065281 96Ga0208500_10370042 97Ga0208622_10255162 98Ga0208744_10071924 99Ga0208249_10665832 100Ga0208379_10948922 101Ga0208379_11121221 102Ga0207954_10400872 103Ga0208386_10400711 104Ga0208867_10509561 105Ga0208258_10201661 106Ga0209189_13034931 107Ga0209084_10300963 108Ga0316219_101144111 109Ga0316219_11622231 110Ga0316220_10188023 111Ga0316220_11261023 112Ga0316220_12730051 113Ga0316218_10920662 114Ga0316226_10722794 115Ga0316226_11039834 116Ga0316228_10960041 117Ga0316221_12157271 118Ga0316230_12225303 119Ga0316230_13055602 120Ga0316225_10233424 121Ga0316227_10109596 122Ga0316231_11244414
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1TB18AUG2009E_0028356 2Ga0007865_10073402 3Ga0007875_10037394 4Ga0065170_10375643 5Ga0007809_100234571 6Ga0007876_11067581 7Ga0164297_103370941
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1TB18AUG2009E_0028356 2Ga0007865_10073402 3Ga0007875_10037394 4Ga0065170_10375643 5Ga0007809_100234571 6Ga0007876_11067581 7Ga0164297_103370941
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.45% β-sheet: 34.69% Coil/Unstructured: 42.86%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13370	Fer4_13	14.75
PF14237	GYF_2	2.46
PF09834	DUF2061	1.64
PF02195	ParBc	1.64
PF03358	FMN_red	1.64
PF04984	Phage_sheath_1	0.82
PF01391	Collagen	0.82
PF13518	HTH_28	0.82
PF07661	MORN_2	0.82
PF03567	Sulfotransfer_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.82
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	40.98 %
Unclassified	root	N/A	59.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	8.20 %
Unclassified	root	N/A	59.02 %
Viruses	superkingdom	All Organisms → Viruses	32.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.20 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Unclassified	root	N/A	59.02 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.64 %
Unclassified	root	N/A	59.02 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Unclassified	root	N/A	59.02 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.64 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.64 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Unclassified	root	N/A	59.02 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.82 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	1.64 %
Unclassified	root	N/A	59.02 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	1.64 %
Unclassified	root	N/A	59.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.82 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.15 %
Thermoanaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermoanaerobacter	1.64 %
Unclassified	root	N/A	59.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.82 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c002835	Not Available	2763	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1019563	All Organisms → Viruses → Predicted Viral	3174	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1028053	All Organisms → Viruses → Predicted Viral	2416	Open in IMG/M
3300003787\|Ga0007811_1003276	All Organisms → Viruses → Predicted Viral	1992	Open in IMG/M
3300003787\|Ga0007811_1006358	Not Available	1253	Open in IMG/M
3300003796\|Ga0007865_1003299	All Organisms → Viruses → Predicted Viral	2062	Open in IMG/M
3300003796\|Ga0007865_1007340	All Organisms → Viruses → Predicted Viral	1193	Open in IMG/M
3300003797\|Ga0007846_1008436	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300003798\|Ga0007842_1000785	Not Available	2833	Open in IMG/M
3300003813\|Ga0007879_1005307	All Organisms → Viruses → Predicted Viral	1744	Open in IMG/M

Showing 1 to 10 of 122 entries

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	14.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic	85.25%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.93%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	14.75%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	55.74%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	14.75%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	55.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	14.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.20%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB18AUG2009E_0028356	3300000203	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIGATLYLYSLTQDEVDDVLAKY*
TBL_comb48_EPIDRAFT_10195638	3300000439	Freshwater	MSTFNCEQYVLDNYGEEIVAMFVEEYGIGATIYLYSLTQDEVDEVLAGY*
TBL_comb48_EPIDRAFT_10280532	3300000439	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007811_10032764	3300003787	Freshwater	MSTFDCKQYILDTYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0007811_10063583	3300003787	Freshwater	MSDFNCKQYVQDNYGEEIVAMYVEEYGIESTLYLYSLTQDEVDXVLAKY*
Ga0007865_10032994	3300003796	Freshwater	MSTFNCKQYILDTXGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007865_10073402	3300003796	Freshwater	QYILDTYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0007846_10084363	3300003797	Freshwater	MSDFNCKQYVQDNYGEEIVAMYVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007842_10007851	3300003798	Freshwater	CKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007879_10053073	3300003813	Freshwater	MSTFNCEQYVQDNXGEEIXAMXVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007877_10063324	3300003814	Freshwater	MSTFNCEQYVQDNYGEEIVAMYVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007863_10036054	3300003820	Freshwater	MSDFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007863_10105881	3300003820	Freshwater	MSTFNCEQYVQDNYGEEIVAMFVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0007863_10162172	3300003820	Freshwater	MSTFNCKQYVLDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDEVLAKY*
Ga0007875_10037394	3300003823	Freshwater	MSTFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEY*
Ga0007880_10043043	3300003827	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIEATLYLYSLTQDEVDEVLAKY*
Ga0065173_10300621	3300004686	Freshwater	MSTFNCKQYIQDNYEEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0065176_10242671	3300004691	Freshwater	MNDFNCEQYVEDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDEVLAR
Ga0065171_10065472	3300004692	Freshwater	MSNFNCEQYVLDNYGEEIIAMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0065170_10375643	3300004694	Freshwater	EYNLYNPITHTDETHIMNDFNCEQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY*
Ga0007791_100200142	3300004772	Freshwater	MSTFNCKQYIQDNYGEEIVDMYVEEYGIGATLYLYSLTQDEVDDVLARY*
Ga0007827_100120514	3300004777	Freshwater	MSTFNCKQYVQDNYGEEIIAMFVEEYGIESTLYLYSLTQDEVDEVLAKY*
Ga0007809_100133903	3300004807	Freshwater	MSTFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0007809_100234571	3300004807	Freshwater	MSTFNCKQYVLDNYGEEIIDMFVEEYGIYATTYLYSLTQD
Ga0007809_100321341	3300004807	Freshwater	MNDFNCEQYVLDNYGEEIIDMFVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0007809_100366062	3300004807	Freshwater	MNDFNCEQYVEDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0007809_101950542	3300004807	Freshwater	MSNFNCKQYIQDNYGEEIIDMYVEEYGIYATTYLYSLTQDEVDEVLAKY*
Ga0007876_10623652	3300006071	Freshwater	MSNFNCEQYVLDNYGEEIVDMYVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0007876_11067581	3300006071	Freshwater	EEIIAMYVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0007876_11496512	3300006071	Freshwater	MSTFNCEQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDILAKY*
Ga0007862_10260891	3300006108	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDILAKY*
Ga0007862_10491902	3300006108	Freshwater	MKYIMNDFNCEQYVLDNYGEEIIDMFVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0007862_11008572	3300006108	Freshwater	VLDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDEVLAKY*
Ga0007857_100085121	3300006112	Freshwater	MNDFNCEQYVLDNYGEEIIALYVEEYGIGATLYLYSLTQDEVDDVLAKY*
Ga0007816_10741911	3300006115	Freshwater	MSTFNCKQYIQDNYGEEIVDMYVEEYGIGATLYLYSLTQDEVDDVLAKY*
Ga0007859_10268982	3300006118	Freshwater	MNDFNCEQYVEDNYGEEIIALYVEEYGIGATLYLYSLTQDEVDDILAKY*
Ga0007866_10235913	3300006119	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY*
Ga0007824_10164752	3300006121	Freshwater	MNDFNCEQYVLDNYGEEIIALYVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0007824_10253211	3300006121	Freshwater	THIMNDFNCEQYVEDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0007828_10717151	3300006128	Freshwater	MSDFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEV
Ga0114962_102359601	3300009151	Freshwater Lake	MGAFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLARY*
Ga0114962_105301971	3300009151	Freshwater Lake	MSTFNCKQYIQDNYGEEIVAMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0114963_101794613	3300009154	Freshwater Lake	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLARY*
Ga0114964_106245981	3300010157	Freshwater Lake	EEIVDMFVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0136644_101409993	3300010334	Freshwater Lake	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLT
Ga0136644_102307102	3300010334	Freshwater Lake	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDEVLAKY*
Ga0133913_108586566	3300010885	Freshwater Lake	MGAFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY*
Ga0133913_119070511	3300010885	Freshwater Lake	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDEVL
Ga0164296_100184730	3300013093	Freshwater	EQYVLDNYGEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0164296_12416742	3300013093	Freshwater	MKYIMNDFNCKQYIQDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0164296_14010012	3300013093	Freshwater	GEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0164297_100267712	3300013094	Freshwater	MSNFNCEQYVLDNYGEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY*
Ga0164297_101119182	3300013094	Freshwater	MSNFNCKQYVLDNYGEEIIAMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0164297_103363431	3300013094	Freshwater	MSTFNCKQYILDNYGEEIIDMFVEEYGIESTLYLYSLTQDEVDDVLAKY*
Ga0164297_103370941	3300013094	Freshwater	MKYIMNDFNCKQYILDNYGEEIVDMFVEEYGIESTLYLY
Ga0214190_10179843	3300020695	Freshwater	MSTFNCKQYVLDNYGEEIVAMFVEEYGIESTLYLYSLTQDEVDD
Ga0214177_10110133	3300020705	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIYATTYLYSLTQDEVDEVLAKY
Ga0214207_10090322	3300020716	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0214178_10075684	3300020718	Freshwater	MSTFNCEQYVLDNYGEEIVAMFVEEYGIGATIYLYSLTQDEVDDVLAKY
Ga0214178_10086051	3300020718	Freshwater	MSTFNCEQYVQDNYGEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0214178_10214361	3300020718	Freshwater	MKYIMNDFNCKQYILDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0214246_10358412	3300020727	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAGY
Ga0214219_10550341	3300020735	Freshwater	YVLDNYGEEIIALYVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0214211_10176491	3300021125	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0214193_10106724	3300021127	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0214206_10017769	3300021131	Freshwater	MSTFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0214175_10186433	3300021133	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIYATTYLY
Ga0214167_10339882	3300021136	Freshwater	GQEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0214166_10478221	3300021139	Freshwater	MKYIMNDFNCKQYILDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0214166_10793042	3300021139	Freshwater	MSTFNCEQYVLDNYGEEIIAMYVEEYGIYATTYLYSLTQDEVDGVLAGY
Ga0214166_10883211	3300021139	Freshwater	MKYIMNDFNCKQYIQDNYGEEIVAMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0214192_10066671	3300021142	Freshwater	LDNYGQEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0248169_10009950	3300022602	Freshwater	MSNFNCEQYVLDNYGEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0208619_1011262	3300025336	Freshwater	MSTFNCEQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDILAKY
Ga0208619_1074771	3300025336	Freshwater	MNDFNCEQYVLDNYGEEIIALYVEEYGIGATLYLYSLTQDEVD
Ga0208502_10026841	3300025339	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIESTLYLYSLT
Ga0208502_10042071	3300025339	Freshwater	TFNCEQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDILAKY
Ga0208383_10017917	3300025357	Freshwater	MSDFNCKQYILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0208383_10098882	3300025357	Freshwater	MSTFDCKQYILDTYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0208383_10312611	3300025357	Freshwater	VLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0208504_10314322	3300025358	Freshwater	MNDFNCKQYVLDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0208382_10062187	3300025369	Freshwater	MKYIMNDFNCEQYVLDNYGEEIIDMFVEEYGIGATLYLYSLTQDEVDDILAKY
Ga0207957_10055272	3300025372	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0208738_10139413	3300025379	Freshwater	MNDFNCEQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0208256_10261192	3300025382	Freshwater	IYIMSNFNCEQYVLDNYGEEIIAMFVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0208257_10067971	3300025389	Freshwater	MSTFNCEQYVQDNYGEEIVAMFVEEYGIGATLYLYSLTQDEVDEVLAKY
Ga0208257_10315783	3300025389	Freshwater	IQDNYGEEIIDMYVEEYGIYATTYLYSLTQDEVDEVLAKY
Ga0208380_10161741	3300025392	Freshwater	MSTFNCKQYIQDNYEEEIVDMFVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0208380_10169892	3300025392	Freshwater	MSTFNCKQYVQDNYGEEIIAMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0208251_10202394	3300025398	Freshwater	MSDFNCKQYVQDNYGEEIVAMYVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0207955_10240133	3300025401	Freshwater	ILDTYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0207955_10524883	3300025401	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIESTLYLYSLTQDE
Ga0208745_10042723	3300025403	Freshwater	MSTFNCEQYVQDNYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0208253_10006453	3300025418	Freshwater	MNDFNCEQYVEDNYGEEIIDMFVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0208500_10065281	3300025429	Freshwater	QYVQDNYGEEIIAMYVEEYGIEATLYLYSLTQDEVDEVLAKY
Ga0208500_10370042	3300025429	Freshwater	VLDNYGEEIIDMFVEEYGIGATLYLYSLTQDEVDEVLAKY
Ga0208622_10255162	3300025430	Freshwater	VLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0208744_10071924	3300025450	Freshwater	MSNFNCEQYVLDNYGEEIVDMYVEEYGIYATTYLYSLTQDEVDDVLAKY
Ga0208249_10665832	3300025532	Freshwater	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLARY
Ga0208379_10948922	3300025598	Freshwater	MSNFNCKQYIQDNYGEEIIDMYVEEYGIYATTYLYSLTQDEVDEVLAKY
Ga0208379_11121221	3300025598	Freshwater	DNYGEEIIAMYVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0207954_10400872	3300025606	Freshwater	MSTFNCKQYVQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLARY
Ga0208386_10400711	3300025781	Freshwater	TYGEEIVAMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0208867_10509561	3300025782	Freshwater	MNDFNCEQYVLDNYGEEIIALYVEEYGIGATLYLYSLTQ
Ga0208258_10201661	3300025783	Freshwater	MSTFNCEQYVQDNYGEEIIAMYVEEYGIESTLYLYSLTQ
Ga0209189_13034931	3300027747	Freshwater Lake	DIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDEVLAKY
Ga0209084_10300963	3300027749	Freshwater Lake	MSTFNCKQYIQDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0316219_101144111	3300031759	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATTYLYSLTQDEVDEVLAKY
Ga0316219_11622231	3300031759	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDE
Ga0316220_10188023	3300031884	Freshwater	MSNFNCKQYVLDNYGEEIIAMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0316220_11261023	3300031884	Freshwater	MKYIMNDFNCKQYIQDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0316220_12730051	3300031884	Freshwater	MSAFNCKQYIQDNYGEEIIAMYVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0316218_10920662	3300032117	Freshwater	MSTFNCEQYVLDNYGEEIVDMYVEEYGIYATTYLYSLTQDEVDEVLAKY
Ga0316226_10722794	3300032562	Freshwater	MSTFNCEQYVLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0316226_11039834	3300032562	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATTYLYSLTQD
Ga0316228_10960041	3300032579	Freshwater	LDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDEVLAKY
Ga0316221_12157271	3300032665	Freshwater	MKYIMNDFNCKQYIQDNYGEEIVDMFVEEYGIESTLY
Ga0316230_12225303	3300032668	Freshwater	MSNFNCEQYVLDNYGEEIVDMFVEGYGIGATLYLYSLTQDEVDD
Ga0316230_13055602	3300032668	Freshwater	MKYIMNDFNCEQYVEDNYGEEIVDMFVEEYGIGATLYLYSLTQDEVDDVLAKY
Ga0316225_10233424	3300032675	Freshwater	MSTFNCEQYVLDNYGEEIVDMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0316227_10109596	3300032677	Freshwater	MSNFNCEQYVLDNYGEEIIAMFVEEYGIESTLYLYSLTQDEVDDVLAKY
Ga0316231_11244414	3300032722	Freshwater	MSTFNCKQYVLDNYGEEIVDMFVEEYGIGATTYLYSLTQDEVDEVL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070809

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences