NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070524

Metagenome / Metatranscriptome Family F070524

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070524
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 43 residues
Representative Sequence MVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLPF
Number of Associated Samples 100
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.36 %
% of genes near scaffold ends (potentially truncated) 99.19 %
% of genes from short scaffolds (< 2000 bps) 86.99 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.374 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.073 % of family members)
Environment Ontology (ENVO) Unclassified
(22.764 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.780 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.99%    β-sheet: 0.00%    Coil/Unstructured: 69.01%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF03471CorC_HlyC 40.65
PF00005ABC_tran 2.44
PF01797Y1_Tnp 2.44
PF02687FtsX 1.63
PF12704MacB_PCD 1.63
PF04397LytTR 0.81
PF01969Ni_insertion 0.81
PF10728DUF2520 0.81
PF07804HipA_C 0.81
PF08681DUF1778 0.81
PF01594AI-2E_transport 0.81
PF12679ABC2_membrane_2 0.81
PF00589Phage_integrase 0.81
PF03544TonB_C 0.81
PF13305TetR_C_33 0.81
PF13545HTH_Crp_2 0.81
PF069833-dmu-9_3-mt 0.81
PF13602ADH_zinc_N_2 0.81
PF02384N6_Mtase 0.81
PF01804Penicil_amidase 0.81
PF00294PfkB 0.81
PF00106adh_short 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 2.44
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.81
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.81
COG1641CTP-dependent cyclometallase, nickel-pincer nucleotide (NPN) cofactor biosynthesisCoenzyme transport and metabolism [H] 0.81
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.81
COG3550Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin moduleSignal transduction mechanisms [T] 0.81
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.81
COG4453Uncharacterized conserved protein, DUF1778 familyFunction unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.37 %
UnclassifiedrootN/A1.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10074286All Organisms → cellular organisms → Bacteria → Acidobacteria1655Open in IMG/M
3300001593|JGI12635J15846_10557663All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300005179|Ga0066684_10947291All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005186|Ga0066676_10226623All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300005332|Ga0066388_100041728All Organisms → cellular organisms → Bacteria4551Open in IMG/M
3300005332|Ga0066388_105212310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300005336|Ga0070680_100698937All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005434|Ga0070709_10840653All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300005435|Ga0070714_100428150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1254Open in IMG/M
3300005542|Ga0070732_10243105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1078Open in IMG/M
3300005542|Ga0070732_10861549All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300005563|Ga0068855_100997905All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300005563|Ga0068855_101912521All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300005614|Ga0068856_100591500All Organisms → cellular organisms → Bacteria → Acidobacteria1131Open in IMG/M
3300005764|Ga0066903_102866770All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300005764|Ga0066903_103623769All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300005764|Ga0066903_107336074All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300006052|Ga0075029_100548544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300006086|Ga0075019_10071271All Organisms → cellular organisms → Bacteria → Acidobacteria1971Open in IMG/M
3300006172|Ga0075018_10233680All Organisms → cellular organisms → Bacteria → Acidobacteria884Open in IMG/M
3300006173|Ga0070716_100336328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1063Open in IMG/M
3300006954|Ga0079219_11895167All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300006954|Ga0079219_12141033All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300007255|Ga0099791_10428290All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300009038|Ga0099829_10088582All Organisms → cellular organisms → Bacteria2385Open in IMG/M
3300009038|Ga0099829_10385543All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1157Open in IMG/M
3300009088|Ga0099830_10757644All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300009088|Ga0099830_11220506All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300009143|Ga0099792_10341457All Organisms → cellular organisms → Bacteria → Acidobacteria901Open in IMG/M
3300009792|Ga0126374_11906548All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300009839|Ga0116223_10911453All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300010048|Ga0126373_10331280All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1529Open in IMG/M
3300010048|Ga0126373_11809746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300010048|Ga0126373_12108724All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300010048|Ga0126373_12464246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4580Open in IMG/M
3300010358|Ga0126370_10823464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium830Open in IMG/M
3300010361|Ga0126378_12434162All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300010366|Ga0126379_12934209All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300010373|Ga0134128_11953819All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300010376|Ga0126381_102362007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300010396|Ga0134126_10060356All Organisms → cellular organisms → Bacteria4730Open in IMG/M
3300010396|Ga0134126_10188845All Organisms → cellular organisms → Bacteria2473Open in IMG/M
3300010396|Ga0134126_12429115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300010396|Ga0134126_12672996All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300010398|Ga0126383_13528900All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300011270|Ga0137391_10816034All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300012189|Ga0137388_10398441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1274Open in IMG/M
3300012205|Ga0137362_10096878All Organisms → cellular organisms → Bacteria2479Open in IMG/M
3300012210|Ga0137378_11722991All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium532Open in IMG/M
3300012361|Ga0137360_10048974All Organisms → cellular organisms → Bacteria3036Open in IMG/M
3300012362|Ga0137361_10061449All Organisms → cellular organisms → Bacteria3144Open in IMG/M
3300012362|Ga0137361_11714468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300012363|Ga0137390_11984312All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300012532|Ga0137373_10154053All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300012685|Ga0137397_10742751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium728Open in IMG/M
3300012917|Ga0137395_10678797All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300012957|Ga0164303_10263646All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46995Open in IMG/M
3300012960|Ga0164301_10312622Not Available1063Open in IMG/M
3300012971|Ga0126369_11095104All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300012971|Ga0126369_11750191All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300013307|Ga0157372_11259381All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117854Open in IMG/M
3300014968|Ga0157379_10213294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1748Open in IMG/M
3300015053|Ga0137405_1213717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1354Open in IMG/M
3300015054|Ga0137420_1463010All Organisms → cellular organisms → Bacteria5212Open in IMG/M
3300016270|Ga0182036_10877033All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300016294|Ga0182041_10877096All Organisms → cellular organisms → Bacteria → Acidobacteria806Open in IMG/M
3300016294|Ga0182041_11568578All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300016319|Ga0182033_11824780All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300016445|Ga0182038_10410349All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300017933|Ga0187801_10045411All Organisms → cellular organisms → Bacteria → Acidobacteria1584Open in IMG/M
3300018064|Ga0187773_11138590All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300020579|Ga0210407_10173626All Organisms → cellular organisms → Bacteria → Acidobacteria1668Open in IMG/M
3300020579|Ga0210407_10765305All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300020580|Ga0210403_10891585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300020581|Ga0210399_11077335All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300020583|Ga0210401_10307974All Organisms → cellular organisms → Bacteria → Acidobacteria1444Open in IMG/M
3300020583|Ga0210401_10789510All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300020583|Ga0210401_11445155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300021168|Ga0210406_11362592All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300021171|Ga0210405_11009895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300021432|Ga0210384_11630333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300021560|Ga0126371_10029001All Organisms → cellular organisms → Bacteria5164Open in IMG/M
3300022523|Ga0242663_1069368All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300024330|Ga0137417_1193377All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300025898|Ga0207692_11199301All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium504Open in IMG/M
3300025910|Ga0207684_10090173All Organisms → cellular organisms → Bacteria2612Open in IMG/M
3300025912|Ga0207707_10101630All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2513Open in IMG/M
3300025912|Ga0207707_10314369All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300025917|Ga0207660_10014176All Organisms → cellular organisms → Bacteria5234Open in IMG/M
3300025917|Ga0207660_10532691All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300025917|Ga0207660_11516675All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300025921|Ga0207652_10374265Not Available1286Open in IMG/M
3300025922|Ga0207646_10135275All Organisms → cellular organisms → Bacteria → Acidobacteria2219Open in IMG/M
3300025928|Ga0207700_10431170All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300025944|Ga0207661_10441503All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1184Open in IMG/M
3300025949|Ga0207667_11629941All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300026320|Ga0209131_1396746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300026536|Ga0209058_1026394All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3678Open in IMG/M
3300026895|Ga0207758_1004136All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1605Open in IMG/M
3300027765|Ga0209073_10446434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300027911|Ga0209698_10633931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300028536|Ga0137415_11346303All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300028800|Ga0265338_10858691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300028906|Ga0308309_11366958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300030707|Ga0310038_10351799All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300031231|Ga0170824_106945345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300031446|Ga0170820_16725435All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300031668|Ga0318542_10778360All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300031681|Ga0318572_10847219All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300031744|Ga0306918_11269910All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300031753|Ga0307477_10428128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300031768|Ga0318509_10277142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae938Open in IMG/M
3300031819|Ga0318568_10677978All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300031820|Ga0307473_11403167All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300031846|Ga0318512_10754665All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300031910|Ga0306923_10079485All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3673Open in IMG/M
3300031941|Ga0310912_10383024All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1094Open in IMG/M
3300031947|Ga0310909_10449578All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1081Open in IMG/M
3300031954|Ga0306926_10130615All Organisms → cellular organisms → Bacteria3104Open in IMG/M
3300031981|Ga0318531_10407641All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300032043|Ga0318556_10625599All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300032180|Ga0307471_100252016All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA131818Open in IMG/M
3300033405|Ga0326727_10422422All Organisms → cellular organisms → Bacteria → Acidobacteria1208Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.26%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.50%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.06%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.25%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.25%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.44%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.44%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.63%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026895Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1007428643300000567Peatlands SoilVEHAVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFS
JGI12635J15846_1055766323300001593Forest SoilMSVEFREAPVDDEGVSPHNHRIADYLRPKTLAMLLLGFSSG
Ga0066684_1094729123300005179SoilMSVEFRGAPVDDEGVSPHKHRFADYLRPKTLTMLVLGFSSGLPFYLVG
Ga0066676_1022662313300005186SoilMSVEFREAPLENEGVSPHQHRIGDYLRPKTLAMLLLGFSSG
Ga0066388_10004172843300005332Tropical Forest SoilMSVEFREAPVENERVSLRKHRIADYLRPKTLSMLLLGFSSGLPF
Ga0066388_10521231013300005332Tropical Forest SoilMSVEFREPPLDNVGVSPQKHRIADYLRPKTLAMLLLGFSSG
Ga0070680_10069893723300005336Corn RhizosphereMHLVLVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLGFSSGLPF
Ga0070709_1084065323300005434Corn, Switchgrass And Miscanthus RhizosphereMSVEFRDVAIDHENVTPHKHRVADYLRPKTLAMLLLGFSSGL
Ga0070714_10042815023300005435Agricultural SoilVSSAAATVHMVVFREAPVDNGRVSPHKHRITDYLRPKTLAMLLLGFSS
Ga0070732_1024310523300005542Surface SoilLALLEHMVVFRGAPLDNGRVSPHKHRITDYLRPKTLAMLLLG
Ga0070732_1086154933300005542Surface SoilMAGALRFAKLPSDNRGVSPLKHRMADYLRPKTLAMLLLGFS
Ga0068855_10099790513300005563Corn RhizosphereMFVFREAPVDNGRVSPHKHRITEYLRPKTLAMLLLGFSSGLPF
Ga0068855_10191252133300005563Corn RhizosphereMHLVLVVFRETPVHNGLVSAHKHRITDYLRPKTLAMLLLGFSSGL
Ga0068856_10059150033300005614Corn RhizosphereMVVFREAPVDNGRVSPHKHRITDYLRPKTLAMLLLGFSSGLPFL
Ga0066903_10286677033300005764Tropical Forest SoilMSVEFREAPIENESVSPHKRRITDYLRPKTLAMLFLGFSSGLPFYLV
Ga0066903_10362376943300005764Tropical Forest SoilMSVEFREAPIENEGVSPHKRRITDYLRPKTLAMLF
Ga0066903_10733607413300005764Tropical Forest SoilMSVEFREARVENEGVRPHKHRIADYLRPKTLAMLLLGFSSGLPF
Ga0075029_10054854413300006052WatershedsMVEFREAPVDNEGVSPHKHRLADYLRPKTLSMLLLGFS
Ga0075019_1007127113300006086WatershedsMVEFREAPVDNEGVSPHKHRLADYLRPKTLSMLLLGFSSGL
Ga0075018_1023368013300006172WatershedsMSVEVRGAPVDNEGVNARKHRIGDYLRPKTLTMLLLG
Ga0070716_10033632823300006173Corn, Switchgrass And Miscanthus RhizosphereMVVFREAPVDNGRVSPHKHRITDYLRPKTLAMLLLGFSS
Ga0079219_1189516723300006954Agricultural SoilMSVEFRNPPADNEGVSSQKHRIADYLRPKTLAMLLLGFSSGLPFFLVGN
Ga0079219_1214103313300006954Agricultural SoilVFHEAPLDNGRVSPHKHRITDYLRPKTLAMLLLGFSSGLPFLL
Ga0099791_1042829013300007255Vadose Zone SoilMSVEFREAPVDNERVSLRKHRIADYLRPKTLAMLLLGFSSGLPFFLV
Ga0099829_1008858243300009038Vadose Zone SoilMSVEFREAPVDDEDVSPHKHRIADYLRPKTLTMLLLGFSS
Ga0099829_1038554313300009038Vadose Zone SoilMSVEFRVAPVDDEGVSPHKHLVADYLRPKTLTMLLLGFSSG
Ga0099830_1075764413300009088Vadose Zone SoilMRVQFREAPVDEEGVSPHKHRVAGYLRPNTLEPLLL
Ga0099830_1122050613300009088Vadose Zone SoilMSVEFREAPVDDEGVSPHKHLVADYLRPKTLTMLL
Ga0099792_1034145713300009143Vadose Zone SoilMTVEFREAPVDDEDVSPHKHRVAGYLRPKTLTMLLLGFSS
Ga0126374_1190654813300009792Tropical Forest SoilMNVEFREAPVENEGVSPHKRRITDYLQPKTLAMLLLGF
Ga0116223_1091145313300009839Peatlands SoilVEHRVEFREAPVDNERVNPHKHRIADYLRPKTLAMLLLGFSSGL
Ga0126373_1033128023300010048Tropical Forest SoilMSVEFREAHTDNEGVSPQKHRISDYLRPKTLAMLLLGFSSGLPFFLV
Ga0126373_1180974623300010048Tropical Forest SoilMVEIRQAPVDNERVSPQKHRIADYLRPKTLAMLLLGFSSGL
Ga0126373_1210872413300010048Tropical Forest SoilMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSS
Ga0126373_1246424613300010048Tropical Forest SoilMVEFRKAPVDNERVNSRKHRIADYLRPKTLAMLLLGF
Ga0126370_1082346413300010358Tropical Forest SoilMVEFREAPVENERVSPHKHRIADYLRPKTLAMLLLGFS
Ga0126378_1243416223300010361Tropical Forest SoilMFEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLP
Ga0126379_1293420923300010366Tropical Forest SoilMVEFREAPVDNERVSPHKHRFADYLRPKTLAMLLLGFSSGLPFLLVG
Ga0134128_1195381923300010373Terrestrial SoilMHLVLVVFREAPVHNGLVSAHKHRITEYLRPKTLAMLLLGFSSGLPFLLV
Ga0126381_10236200713300010376Tropical Forest SoilMGVEFREAPLDNEAVSPQKHRIADYLRPKTLAMLLLGFSSGLPFFL
Ga0134126_1006035613300010396Terrestrial SoilMHLVLVVFREAPVHNELVSAHKHRITDYLRPKTLAMLLLGFSS
Ga0134126_1018884513300010396Terrestrial SoilMHLVLVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLGFSSGLPFL
Ga0134126_1242911513300010396Terrestrial SoilMSVEFRKAPVHDESVSSHKHRISDYLQPKTLTMLLLGFSSGLPF
Ga0134126_1267299623300010396Terrestrial SoilMHLVLVVFRESPVHNGRVSAHKHRITEYLRPKTLAMLLLGFSSGLPFLLV
Ga0126383_1352890013300010398Tropical Forest SoilMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLPF
Ga0137391_1081603423300011270Vadose Zone SoilMVEFREAPVDNERVSPHKHGIADYLRPKTLAMLLLGFSSG
Ga0137388_1039844123300012189Vadose Zone SoilMSVEFREAPVDDEGVSPHKHLVADYLRPKTLTMLLLGFSSGLPFFLVGN
Ga0137362_1009687853300012205Vadose Zone SoilMTVEFREAPVDDEGVSPHKHLVADYLRPKTLTMLLLGFSSGLPF
Ga0137378_1172299113300012210Vadose Zone SoilMVEFRVAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLPFLLVG
Ga0137360_1004897413300012361Vadose Zone SoilMRVEFREAPVDDEGVSPNKHRIADYLRPKTLAMLLLGFSSGLPFF
Ga0137361_1006144953300012362Vadose Zone SoilMSVEFREAPVDDEGVSPHKHLVADYLRPKTLTMLLLGFSSGLPFYLVG
Ga0137361_1171446823300012362Vadose Zone SoilMSVEFRDAPVDDEGVSPHKHLVADYLRPKTLTMLLLGFSSGLPFYLVG
Ga0137390_1198431213300012363Vadose Zone SoilVQDGQQSVEFREAPVDNEGVSPHKHRLADYLRPKTLSMLLLGFSSGLPF
Ga0137373_1015405353300012532Vadose Zone SoilMVEFREAPVDNERVSSHKHRIADYLRPKTLAMLLL
Ga0137397_1074275123300012685Vadose Zone SoilMRVEFREASVDDEDVSPHKHGVAGYLRPKTLTMLLLGFSSGLPFFLVG
Ga0137395_1067879713300012917Vadose Zone SoilMSVEFREAPVDDEGVSPHKHLVADYLRPKTLAMLLLGF
Ga0164303_1026364613300012957SoilMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLP
Ga0164301_1031262213300012960SoilMVVFRETPVDNGRVSPHKHRITDYLRPKTLAMLLLGFSSGLP
Ga0126369_1109510413300012971Tropical Forest SoilLSFVRLRYNERVNTHKRRIADYLRPKTLAMLLLGFSSGLPFLL
Ga0126369_1175019113300012971Tropical Forest SoilMVEFRKAPVENERVSPHKHRIADYLRPKTLAMLLLGFSSGL
Ga0157372_1125938113300013307Corn RhizosphereMHLVLVVFREAPVHNGLVSAHKHRITEYLRPKTLAMLLLGFSSGLPFLLVGNT
Ga0157379_1021329413300014968Switchgrass RhizosphereMVVFREAPVDNGRVSPHKHRITDYLRPKTLAMLLLGF
Ga0137405_121371723300015053Vadose Zone SoilMSVEFREGPLENEGVSSQKHRIADYLRPKTLAMLLLGFSSGL
Ga0137420_1463010113300015054Vadose Zone SoilMSVEFREPPRDNVRVSLSKHRIADYLRPKTFDNVLLGFSSGLPFYLVWQYFRLLAPR*
Ga0182036_1087703323300016270SoilMVEFRKAPADNERVNPHKRQIADYLRPKTLAMLLLGFSSGLPFLLVG
Ga0182041_1087709633300016294SoilMSVEFREAPIENEDVSPHKRRITDYLRPKTLAMLF
Ga0182041_1156857813300016294SoilMFGFMSVDFREAPVENEGVSPHKHRITDYLRPKTLAM
Ga0182033_1182478013300016319SoilMSVEFREAPIENEGVSLYKHRISDYLRPKTLSMLLLGFSS
Ga0182038_1041034923300016445SoilMSVEHREAHVENEKVRPQKHRIADYLRPKTLTMLLLGFS
Ga0187801_1004541113300017933Freshwater SedimentMSVEFGEAHVENESVSPHKHRITDYLRPKTFTMLLLGFSSGLPFL
Ga0187773_1113859023300018064Tropical PeatlandMVEIREAPVDNERVSPQKHRITDYLRPKTLAMLLLGFSSGLPFLLV
Ga0210407_1017362613300020579SoilMRVEFREPPVDNERVSLRKHRIADYLRPKTLTMLLLGFSSGLPF
Ga0210407_1076530523300020579SoilMSVEFREAPVDNERVNPHKRRIADYLRPKTLTMLLL
Ga0210403_1089158513300020580SoilMSVEFREAPVDDEGVSPHKHRIGDYLQPKTLTMLLLG
Ga0210399_1107733513300020581SoilMRVEFREAPVDDEGVSPHNHRLADYLRPKTLSMLLLGFSS
Ga0210401_1030797413300020583SoilMVEFREPPVDNDRVNPHKHRFADYLRPKTLAMLLLGFSSGLPFLL
Ga0210401_1078951023300020583SoilMVEFREPPVDNDGVNPHKHQFADYLRPKTLAMLLLGFSSGLP
Ga0210401_1144515523300020583SoilMSVEFREAPVDDEGVSPHKHRVADYLRPKTLAMLLLGFSSGLPF
Ga0210406_1136259213300021168SoilMRVEFREAPVDNERVSLRKHRIADYLRPKTLAMLLLGFSSGLPFFLV
Ga0210405_1100989513300021171SoilMSVEDRKSRVENECLNPHKHRITDYLRPKTLSMLLLGFSSGLPFYL
Ga0210384_1163033323300021432SoilMSVEFRKAPLENEGVSSQKHRIADYLRPKTLAMLLLGFSSGLP
Ga0126371_1002900153300021560Tropical Forest SoilMSVEFREAPVENEGVSPHKHRITDYLRPKTLAMLLLGFSSGLPFYLVG
Ga0242663_106936813300022523SoilMVEFREPPVDNDRVNPHKHRFADYLRPKTLAMLLLGFS
Ga0137417_119337713300024330Vadose Zone SoilMSVEFREAPVDNERVSLRKHRIADYLRPKTLTMLLLGFSSGLP
Ga0207692_1119930113300025898Corn, Switchgrass And Miscanthus RhizosphereMVEFREAPVDNERVSPHKHQIADYLRPKTLTMLLLGFSSGFPFLLVGN
Ga0207684_1009017313300025910Corn, Switchgrass And Miscanthus RhizosphereMVEFRVAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLPFL
Ga0207707_1010163033300025912Corn RhizosphereMVEFREAPIDNERVSSHKHRIADYLRPKTLAMLLLGFSS
Ga0207707_1031436933300025912Corn RhizosphereMVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLGFSSGLPF
Ga0207660_1001417663300025917Corn RhizosphereMHLVLVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLGFSSGLPFLL
Ga0207660_1053269113300025917Corn RhizosphereMVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLGFSSGLPFLL
Ga0207660_1151667523300025917Corn RhizosphereMVEFREAPIDNERVSSHKHRIADYLRPKTLAMLLLGFSSGLPFLLV
Ga0207652_1037426523300025921Corn RhizosphereMVVFRDAPVHNGHLTAHKHRITEYLRPKTLAMLLLG
Ga0207646_1013527543300025922Corn, Switchgrass And Miscanthus RhizosphereMVEFRVAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGL
Ga0207700_1043117013300025928Corn, Switchgrass And Miscanthus RhizosphereMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGLPFLLVGN
Ga0207661_1044150333300025944Corn RhizosphereMVEFREAPIDNERVSSHKHRIADYLRPKTLAMLLLGFSSGLPFL
Ga0207667_1162994113300025949Corn RhizosphereMHLVLVVFRETPVHNGLVSAHKHRITDYLRPKTLAMLLLGFSSGLHFQLVGNT
Ga0209131_139674623300026320Grasslands SoilMRVEFREASVDDEDVSPHKHGVAGYLRPKTLTMLLLGFSSGLPFFLVGN
Ga0209058_102639413300026536SoilLHHALSEAREAPVDNEGVSPHKHRLADYLRPKTLAMLL
Ga0207758_100413633300026895Tropical Forest SoilMSVEFREAPVENEGVSPHKHRITDYLRPKTLAMLYLGFS
Ga0209073_1044643423300027765Agricultural SoilMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGF
Ga0209698_1063393113300027911WatershedsMVEFREAPVDNEGVSPHKHRLADYLRPKTLSMLLLGFSSGLPFYL
Ga0137415_1134630313300028536Vadose Zone SoilMDNRVESRKAPVDNEGVSPHKHRLADYLRPKTLAMLLLGF
Ga0265338_1085869113300028800RhizosphereMDKIWRMSIEVRESPVENERVNPRKHRIADYLQPKTLSMLLLGFSSG
Ga0308309_1136695813300028906SoilMDKIWRMSIEVRESPVENERVNPHKHRIADYLQPKTLSMLLL
Ga0310038_1035179913300030707Peatlands SoilVEHAVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLGFSSGL
Ga0170824_10694534513300031231Forest SoilMSVEFREAPVDDESVSPHKHRIADYLRPKTLTMLLLGF
Ga0170820_1672543523300031446Forest SoilMSVEFREAPVDNKRVNPQRHRIADYLRPKTLTMLLLGFSSGLPFFLVG
Ga0318542_1077836023300031668SoilMSVEHREAHVENEKVSPQKHRIADYLRPKTLTMLLLG
Ga0318572_1084721923300031681SoilMSVEHREAHVENEKVSPQKHRIADYLRPKTLTMLLLGFSSGLPFYL
Ga0306918_1126991023300031744SoilMSVEFREARVENESVSPHKHRIADYLRPKTLTMLLLGFSSGLPFLLVGN
Ga0307477_1042812823300031753Hardwood Forest SoilMSVEFREAPVDDEGVSPHKHRVADYLRPKTLTMLLLGFSSGLPFYL
Ga0318509_1027714213300031768SoilMSVEFREAPIENEGVSPHKHRITDYLRPKTLAMLFLGFSSGLPF
Ga0318568_1067797833300031819SoilMSVEFPEAPVENEGVSPHKHRITDYLRPKTLAMLYLGFSSGL
Ga0307473_1140316723300031820Hardwood Forest SoilMSVEFREAPVDDEGVSSHKHQVADYLRPKTLAMLLLGFSSGLPFFLVGNT
Ga0318512_1075466513300031846SoilMSVEFPEAPIENEGVSPHKRWITDYLRPKTLAMLFLGFSSGLPFY
Ga0306923_1007948513300031910SoilMSVEFPEAPVENEGVSPHKHRITDYLRPKTLAMLYLGFSSGLPFYLVG
Ga0310912_1038302413300031941SoilMSVEFGDTPVENEGVSLHKHRITDYLRPKTLAMLLLGFSSGLPFY
Ga0310909_1044957833300031947SoilMSVEFPEAPVENEGVSPHKQRITDYLRPKTLAMLYLGFS
Ga0306926_1013061513300031954SoilMVEFREAPVDNERVSPHKHRFADYLRPKTLAMLLLGFSSGLPF
Ga0318531_1040764133300031981SoilMSVEFREAPIENEDVSPHKRRITDYLRPKTLAMLFLGFSSGLPFY
Ga0318556_1062559913300032043SoilMSVEFREAPVENEGVSPHKHRITDYLRPKTLAMLLLGFSSGLPFYLVGN
Ga0307471_10025201613300032180Hardwood Forest SoilMVEFREAPVDNERVSPHKHRIADYLRPKTLAMLLLG
Ga0326727_1042242233300033405Peat SoilVEHGVEFREAPVDNERVSPHKHRTADYLQPKTLAMLLLGFSSGLPFLLV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
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