NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F070231

Metagenome Family F070231

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070231
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 79 residues
Representative Sequence MADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Number of Associated Samples 103
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.69 %
% of genes near scaffold ends (potentially truncated) 37.40 %
% of genes from short scaffolds (< 2000 bps) 78.86 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.675 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.569 % of family members)
Environment Ontology (ENVO) Unclassified
(35.772 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116
1INPhiseqgaiiFebDRAFT_1015237971
2INPhiseqgaiiFebDRAFT_1015263973
3JGI10220J13317_103829851
4F14TB_1027361202
5soilL1_101086862
6soilL2_1003916010
7soilH1_103158141
8soilH2_100610373
9Ga0055438_101396212
10Ga0062593_1001063633
11Ga0062593_1001491492
12Ga0062593_1002367251
13Ga0062589_1002323262
14Ga0062592_1012941942
15Ga0062594_1005752211
16Ga0065704_100034143
17Ga0065704_104879402
18Ga0065715_100916943
19Ga0065705_104785381
20Ga0065705_107604262
21Ga0065707_109004271
22Ga0070670_1003715441
23Ga0066388_1002796722
24Ga0066388_1010140631
25Ga0070677_101477222
26Ga0070680_1014670111
27Ga0070689_1011148832
28Ga0070661_1010770731
29Ga0070671_1000180573
30Ga0070673_1001911452
31Ga0070688_1001343691
32Ga0070688_1004896531
33Ga0070705_1005854032
34Ga0070694_1005262671
35Ga0070694_1012270461
36Ga0070678_1003886893
37Ga0070678_1013785111
38Ga0070672_1000780614
39Ga0070686_1004020233
40Ga0070695_1008212382
41Ga0070664_1007868851
42Ga0070664_1012536631
43Ga0068857_1017569681
44Ga0068857_1021066321
45Ga0068866_113463842
46Ga0066903_1080533652
47Ga0068863_1000328691
48Ga0068860_1009085642
49Ga0066652_1011211462
50Ga0075417_103116202
51Ga0075417_106735161
52Ga0097621_1014318661
53Ga0075428_1000014736
54Ga0075433_100178102
55Ga0075433_114386921
56Ga0075424_1024157062
57Ga0075419_114359841
58Ga0111539_106558873
59Ga0111539_113884812
60Ga0105245_102062111
61Ga0075418_100872424
62Ga0075418_111391242
63Ga0114129_100903121
64Ga0105243_121048181
65Ga0111538_114321562
66Ga0126380_115138621
67Ga0126382_103787362
68Ga0126382_107057141
69Ga0126376_112219241
70Ga0126376_112568922
71Ga0126372_100382594
72Ga0126372_102748362
73Ga0126377_100800003
74Ga0126377_102085642
75Ga0126379_105692422
76Ga0105239_136066921
77Ga0134127_1000235511
78Ga0134123_125712531
79Ga0105246_107359861
80Ga0157325_10258601
81Ga0157296_103976912
82Ga0164299_101973452
83Ga0164306_110469511
84Ga0157374_103449083
85Ga0157378_100615702
86Ga0163162_106989222
87Ga0157375_126001492
88Ga0075301_10135542
89Ga0157380_103731211
90Ga0132257_1027456051
91Ga0132255_1000388525
92Ga0132255_1001087672
93Ga0173479_100260423
94Ga0182009_100220093
95Ga0207666_10517071
96Ga0210094_10564572
97Ga0207682_100344732
98Ga0207688_102342172
99Ga0207645_101092162
100Ga0207643_100726562
101Ga0207707_107092781
102Ga0207660_102406602
103Ga0207662_100083352
104Ga0207670_101446063
105Ga0207679_118375661
106Ga0207651_107318512
107Ga0207677_103102512
108Ga0207708_100761422
109Ga0207641_100375301
110Ga0207648_121045121
111Ga0207676_102286502
112Ga0207674_115063741
113Ga0268266_108711942
114Ga0268264_105900522
115Ga0310888_102015671
116Ga0307469_111657462
117Ga0307468_1007253291
118Ga0310904_110977101
119Ga0310892_102895253
120Ga0310895_100415221
121Ga0307471_1028116451
122Ga0307472_1006169922
123Ga0310810_102462612
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.89%    β-sheet: 31.48%    Coil/Unstructured: 54.63%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
79.7%20.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Sugarcane Root And Bulk Soil
Soil
Hardwood Forest Soil
Soil
Natural And Restored Wetlands
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
4.1%8.1%4.9%3.3%3.3%3.3%3.3%4.1%4.9%4.1%3.3%10.6%4.1%3.3%3.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10152379713300000364SoilIQQRRELIAMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERTT*
INPhiseqgaiiFebDRAFT_10152639733300000364SoilMIGRLKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERLEQGEGR*
JGI10220J13317_1038298513300001139SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELALERL*
F14TB_10273612023300001431SoilMADDSATHSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLXXXXQGEGGKGEGGRAGPVKRHQ*
soilL1_1010868623300003267Sugarcane Root And Bulk SoilMADEEIGATDRRELIDMIGRRIVANGRELTCGVYLTTTGYEVRAEYADGEVLRTQWAMDTQGARIIANRWVDELELERT*
soilL2_10039160103300003319Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATM*
soilH1_1031581413300003321Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATRWVEELG
soilH2_1006103733300003324Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATRWVEELGLERLQQGKGERGKGEGLVQSQGSSNEGFG*
Ga0055438_1013962123300003995Natural And Restored WetlandsMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGEGGP*
Ga0062593_10010636333300004114SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0062593_10014914923300004114SoilMATTDDPANRRELIEMIGRQTDAGGRELTCGIYLTPTGYDVRAEYADGEVVRTQWAMDTQGARIIASRWVEELGLDRTR*
Ga0062593_10023672513300004114SoilAMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0062589_10023232623300004156SoilMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0062592_10129419423300004480SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGL
Ga0062594_10057522113300005093SoilMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDE
Ga0065704_1000341433300005289Switchgrass RhizosphereMATTHDSGTESNRRELIEMIGRQKDAAGRELTCGVYLTPTGYEVRAEYTDGEVVRMQWAMDTQGARIIANRWVDELELERTK*
Ga0065704_1048794023300005289Switchgrass RhizosphereTTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0065715_1009169433300005293Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0065705_1047853813300005294Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0065705_1076042623300005294Switchgrass RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLERLQ*
Ga0065707_1090042713300005295Switchgrass RhizosphereMADDSTPASHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070670_10037154413300005331Switchgrass RhizosphereELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0066388_10027967223300005332Tropical Forest SoilMTNDSGADHRELIEMIGRHRTADARELTCGIYLTPTGYEVRAEYTDGEVLRMQWAMDTQGARIIANRWIQELGLERTDTT*
Ga0066388_10101406313300005332Tropical Forest SoilGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWVHELGLERVTREGTSGSPDL*
Ga0070677_1014772223300005333Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070680_10146701113300005336Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEE
Ga0070689_10111488323300005340Switchgrass RhizosphereIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070661_10107707313300005344Corn RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0070671_10001805733300005355Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0070673_10019114523300005364Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT*
Ga0070688_10013436913300005365Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRW
Ga0070688_10048965313300005365Switchgrass RhizosphereMATTDDSGNRRELIEMIGRKKDARGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0070705_10058540323300005440Corn, Switchgrass And Miscanthus RhizosphereMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARII
Ga0070694_10052626713300005444Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEE
Ga0070694_10122704613300005444Corn, Switchgrass And Miscanthus RhizosphereMATTNDSGNRRELIEMIGRQKDPGGRELTCGIYLTPTGYEVRAEYTDGEVVRTQWAMDTQGARIIASRW
Ga0070678_10038868933300005456Miscanthus RhizosphereDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070678_10137851113300005456Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELG
Ga0070672_10007806143300005543Miscanthus RhizosphereQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0070686_10040202333300005544Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070695_10082123823300005545Corn, Switchgrass And Miscanthus RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP
Ga0070664_10078688513300005564Corn RhizosphereELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0070664_10125366313300005564Corn RhizosphereMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0068857_10175696813300005577Corn RhizosphereMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVD
Ga0068857_10210663213300005577Corn RhizosphereMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATR
Ga0068866_1134638423300005718Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGREMTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0066903_10805336523300005764Tropical Forest SoilMADDSTPDSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWV
Ga0068863_10003286913300005841Switchgrass RhizosphereELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0068860_10090856423300005843Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0066652_10112114623300006046SoilMSDDSAAHAQRRELIELLGRQTDAAGRELTCGIYLTPTGYEVRAEYTQGEVLRTQWAMDTQGARIIGNRWVEELGLDRVT*
Ga0075417_1031162023300006049Populus RhizosphereMTDDPAPYSRRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGK
Ga0075417_1067351613300006049Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLEGTGTA*
Ga0097621_10143186613300006237Miscanthus RhizosphereAAVGCARMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0075428_10000147363300006844Populus RhizosphereMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGKGEGGRAGPS*
Ga0075433_1001781023300006852Populus RhizosphereMTDDPAPYSRRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGKGEGGRAGPS*
Ga0075433_1143869213300006852Populus RhizosphereMATTNDSGNRRELIEMIGRQKDPGGRELTCGIYLTPTGYEVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLERLQQQ*
Ga0075424_10241570623300006904Populus RhizosphereMAITDDSEAQSRRELIEMVGRQKDAGGRELTCGIYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIASRWVEELGLEGTGTA*
Ga0075419_1143598413300006969Populus RhizosphereMATTDDSGNRRELIEMVGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0111539_1065588733300009094Populus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRTS*
Ga0111539_1138848123300009094Populus RhizosphereMADDSTSYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWADELGLDRDS*
Ga0105245_1020621113300009098Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0075418_1008724243300009100Populus RhizosphereMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGG*
Ga0075418_1113912423300009100Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIATRWVEELGLERLPL*
Ga0114129_1009031213300009147Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVDELGHDRLQ*
Ga0105243_1210481813300009148Miscanthus RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERIR*
Ga0111538_1143215623300009156Populus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRTS*
Ga0126380_1151386213300010043Tropical Forest SoilMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLARTR*
Ga0126382_1037873623300010047Tropical Forest SoilGSGDGYRIGPETMTDDPAPYSQRRELIEMIGRQMGTDARELTCGIYLTQTGYEVSAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERI*
Ga0126382_1070571413300010047Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWAMDTQGARIIASRWVDELGLERTR*
Ga0126376_1122192413300010359Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWPMDTQAGRIIANRWVDELGLERTR*
Ga0126376_1125689223300010359Tropical Forest SoilMTDDPAPYSQRRELIEMIGRQKGTDGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLER
Ga0126372_1003825943300010360Tropical Forest SoilMTNDSGADHRELIAMIGRHRTADARELTCGIYLTPTGYEVRAEYTDGEVLRMQWAMDTQGARIIANRWIQELGLERTDTT*
Ga0126372_1027483623300010360Tropical Forest SoilMADDSTTHAHRRELIEMIGRRRDAGGRELTCGVYLTQTGYEVRAEFSDGEVLRTQWAMDTQGGRIIANRWADELGLERTT*
Ga0126377_1008000033300010362Tropical Forest SoilMTDDPAPYSQRRELIEMIGRQKGTDGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERI*
Ga0126377_1020856423300010362Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWAMDTQGGRIIANRWVDELGLARTR*
Ga0126379_1056924223300010366Tropical Forest SoilMTDNPAPSSQRRELIELIGRQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIASRWVDELGLERVTREGTSGSPDL*
Ga0105239_1360669213300010375Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0134127_10002355113300010399Terrestrial SoilMATTDGSNRRELIEMIGRQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVVRTQWAMDTQGAHIIASRWVEELGLR*
Ga0134123_1257125313300010403Terrestrial SoilMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTRYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0105246_1073598613300011119Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0157325_102586013300012485Arabidopsis RhizosphereMTNHSEADRRELIEMIGRQKDAAGRELTCGVYLTPTGYEVRAEYTDGEVVRMQWAMDTQGAHIIASRWVDELGLERLQQGEGGTPLPSSPFPPSP*
Ga0157296_1039769123300012905SoilMATTDDSGNRRELIEMIGQKKDADGRELTCGVYLTPTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRAS*
Ga0164299_1019734523300012958SoilMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRW
Ga0164306_1104695113300012988SoilMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0157374_1034490833300013296Miscanthus RhizosphereSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0157378_1006157023300013297Miscanthus RhizosphereMSDDSAAHAQRRELIELLGRQRDAAGRELTCGVYLTPTGYEVCAEYTGGEILRTQWAMDTQGARIIANRWVEELGLDRVT*
Ga0163162_1069892223300013306Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDARGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLVPTR*
Ga0157375_1260014923300013308Miscanthus RhizosphereAMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0075301_101355423300014262Natural And Restored WetlandsMADDPASYSHRRELIEMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGEGGP*
Ga0157380_1037312113300014326Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLD
Ga0132257_10274560513300015373Arabidopsis RhizosphereELIGQQTDAGGRELMCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0132255_10003885253300015374Arabidopsis RhizosphereMATTDDSGAQADRRELIEMIGRQKDAGGRELTCGVYLTPTGYEVRAEYADGEVVRTQWAMDTQGAHIIASRWVDELGLERLQQGEGGTPLPSSPFLPSP*
Ga0132255_10010876723300015374Arabidopsis RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRGVDELGLERTR*
Ga0173479_1002604233300019362SoilRQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVFRTQWAMDTQGARIIANRWVDELGLERVTRAGTSGSPDP
Ga0182009_1002200933300021445SoilMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT
Ga0207666_105170713300025271Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0210094_105645723300025549Natural And Restored WetlandsMADDPASYSHRRELIEMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGE
Ga0207682_1003447323300025893Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207688_1023421723300025901Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEMIGRQTDAGGRELTCGIYLTPTGYDVRAEYADGEVVRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207645_1010921623300025907Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207643_1007265623300025908Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR
Ga0207707_1070927813300025912Corn RhizosphereMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV
Ga0207660_1024066023300025917Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207662_1000833523300025918Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207670_1014460633300025936Switchgrass RhizosphereKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207679_1183756613300025945Corn RhizosphereELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL
Ga0207651_1073185123300025960Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGCELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT
Ga0207677_1031025123300026023Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV
Ga0207708_1007614223300026075Corn, Switchgrass And Miscanthus RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIADRWVDELGLERTR
Ga0207641_1003753013300026088Switchgrass RhizosphereQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP
Ga0207648_1210451213300026089Miscanthus RhizosphereMADDSTSYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWADELGLDRDS
Ga0207676_1022865023300026095Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEEL
Ga0207674_1150637413300026116Corn RhizosphereMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRW
Ga0268266_1087119423300028379Switchgrass RhizosphereIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0268264_1059005223300028381Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTLAGTSGSPDP
Ga0310888_1020156713300031538SoilMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIADRWVDELGL
Ga0307469_1116574623300031720Hardwood Forest SoilMAITDDSGTQSNRRELIEMIGRQTDAGGRELTCGIYLTQTGYEVRAEYTDGEVLRMQWAMDTQGGRIIANRWIDELGLERTK
Ga0307468_10072532913300031740Hardwood Forest SoilMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIA
Ga0310904_1109771013300031854SoilEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0310892_1028952533300031858SoilRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRT
Ga0310895_1004152213300032122SoilNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0307471_10281164513300032180Hardwood Forest SoilMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERTT
Ga0307472_10061699223300032205Hardwood Forest SoilMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWVDELGLERVTRAGTSGSPDP
Ga0310810_1024626123300033412SoilMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIAD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.