NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070084

Metagenome / Metatranscriptome Family F070084

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070084
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 59 residues
Representative Sequence VTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Number of Associated Samples 115
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.56 %
% of genes from short scaffolds (< 2000 bps) 95.12 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.724 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.203 % of family members)
Environment Ontology (ENVO) Unclassified
(17.073 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.780 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.29%    β-sheet: 0.00%    Coil/Unstructured: 44.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01029NusB 35.77
PF16192PMT_4TMC 8.94
PF09285Elong-fact-P_C 7.32
PF01186Lysyl_oxidase 4.07
PF02771Acyl-CoA_dh_N 3.25
PF13581HATPase_c_2 3.25
PF02604PhdYeFM_antitox 2.44
PF00719Pyrophosphatase 1.63
PF04672Methyltransf_19 1.63
PF07730HisKA_3 0.81
PF00557Peptidase_M24 0.81
PF13399LytR_C 0.81
PF03176MMPL 0.81
PF13424TPR_12 0.81
PF01636APH 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 3.25
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 2.44
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 2.44
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 1.63
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.81
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.81
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.81
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.81
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.81
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms57.72 %
UnclassifiedrootN/A42.28 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10295225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria586Open in IMG/M
3300004082|Ga0062384_100086112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1643Open in IMG/M
3300005355|Ga0070671_101211443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia665Open in IMG/M
3300005435|Ga0070714_101401474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia682Open in IMG/M
3300005436|Ga0070713_101426283Not Available672Open in IMG/M
3300005471|Ga0070698_101040228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia766Open in IMG/M
3300005537|Ga0070730_11025326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia514Open in IMG/M
3300005538|Ga0070731_11029994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia545Open in IMG/M
3300005568|Ga0066703_10215046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1168Open in IMG/M
3300005921|Ga0070766_10124737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1552Open in IMG/M
3300006041|Ga0075023_100407531Not Available590Open in IMG/M
3300006572|Ga0074051_11792388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1405Open in IMG/M
3300006579|Ga0074054_10023595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300006755|Ga0079222_11867057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia584Open in IMG/M
3300006806|Ga0079220_11101515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia643Open in IMG/M
3300006854|Ga0075425_102290324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300006854|Ga0075425_102886441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300006903|Ga0075426_11382907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia534Open in IMG/M
3300009174|Ga0105241_12647239Not Available504Open in IMG/M
3300009520|Ga0116214_1122002Not Available963Open in IMG/M
3300009521|Ga0116222_1412626Not Available588Open in IMG/M
3300010154|Ga0127503_11094844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales788Open in IMG/M
3300010303|Ga0134082_10029959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2041Open in IMG/M
3300010325|Ga0134064_10512421Not Available500Open in IMG/M
3300010371|Ga0134125_12780186Not Available532Open in IMG/M
3300010379|Ga0136449_101553025Not Available1009Open in IMG/M
3300010396|Ga0134126_11294346Not Available808Open in IMG/M
3300011063|Ga0138537_1049207Not Available1302Open in IMG/M
3300012089|Ga0153924_1049062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria824Open in IMG/M
3300012096|Ga0137389_11178943Not Available656Open in IMG/M
3300012201|Ga0137365_11226795Not Available535Open in IMG/M
3300012203|Ga0137399_11767901Not Available507Open in IMG/M
3300012207|Ga0137381_10871798Not Available779Open in IMG/M
3300012210|Ga0137378_10589473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces samsunensis1021Open in IMG/M
3300012349|Ga0137387_11261002Not Available519Open in IMG/M
3300012353|Ga0137367_10610647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae763Open in IMG/M
3300012960|Ga0164301_11906279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales502Open in IMG/M
3300012985|Ga0164308_10430901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1087Open in IMG/M
3300013105|Ga0157369_12643286Not Available507Open in IMG/M
3300014169|Ga0181531_10074766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2001Open in IMG/M
3300014326|Ga0157380_12635113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales569Open in IMG/M
3300015372|Ga0132256_103619493Not Available520Open in IMG/M
3300016319|Ga0182033_11646335Not Available581Open in IMG/M
3300016404|Ga0182037_11662845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales569Open in IMG/M
3300016445|Ga0182038_12113404Not Available510Open in IMG/M
3300017933|Ga0187801_10224589Not Available749Open in IMG/M
3300017937|Ga0187809_10380279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales535Open in IMG/M
3300017955|Ga0187817_10235496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1167Open in IMG/M
3300017961|Ga0187778_10623234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria725Open in IMG/M
3300017970|Ga0187783_10169391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1607Open in IMG/M
3300017972|Ga0187781_10375852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1013Open in IMG/M
3300017974|Ga0187777_10580989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia788Open in IMG/M
3300017975|Ga0187782_10781486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria738Open in IMG/M
3300017993|Ga0187823_10244720Not Available605Open in IMG/M
3300018006|Ga0187804_10172870Not Available916Open in IMG/M
3300018034|Ga0187863_10747188Not Available553Open in IMG/M
3300018037|Ga0187883_10193837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1042Open in IMG/M
3300018038|Ga0187855_10758871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia565Open in IMG/M
3300018062|Ga0187784_11053910Not Available646Open in IMG/M
3300018064|Ga0187773_10289295Not Available910Open in IMG/M
3300018085|Ga0187772_11020997Not Available605Open in IMG/M
3300018086|Ga0187769_11211591Not Available571Open in IMG/M
3300018090|Ga0187770_10193955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1562Open in IMG/M
3300020170|Ga0179594_10182147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia784Open in IMG/M
3300021168|Ga0210406_10761657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales740Open in IMG/M
3300021180|Ga0210396_10677660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria892Open in IMG/M
3300021402|Ga0210385_10009181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae6006Open in IMG/M
3300021420|Ga0210394_10269333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1491Open in IMG/M
3300021420|Ga0210394_11786823Not Available513Open in IMG/M
3300021477|Ga0210398_10409586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1105Open in IMG/M
3300021477|Ga0210398_11357362Not Available557Open in IMG/M
3300021479|Ga0210410_10072725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3015Open in IMG/M
3300021559|Ga0210409_11538753Not Available541Open in IMG/M
3300021560|Ga0126371_13526238Not Available528Open in IMG/M
3300022718|Ga0242675_1065661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales639Open in IMG/M
3300022724|Ga0242665_10202157Not Available655Open in IMG/M
3300024186|Ga0247688_1032820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400799Open in IMG/M
3300024227|Ga0228598_1134415Not Available504Open in IMG/M
3300025910|Ga0207684_11249991Not Available613Open in IMG/M
3300025911|Ga0207654_11300799Not Available530Open in IMG/M
3300025929|Ga0207664_10434620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1170Open in IMG/M
3300025929|Ga0207664_11731933Not Available547Open in IMG/M
3300026317|Ga0209154_1303623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales525Open in IMG/M
3300027043|Ga0207800_1042287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria631Open in IMG/M
3300027567|Ga0209115_1115226Not Available608Open in IMG/M
3300027812|Ga0209656_10036640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae2859Open in IMG/M
3300027889|Ga0209380_10530215Not Available685Open in IMG/M
3300029944|Ga0311352_10317638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1294Open in IMG/M
3300029951|Ga0311371_10726952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1241Open in IMG/M
3300030494|Ga0310037_10006724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5642Open in IMG/M
3300030494|Ga0310037_10127933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1163Open in IMG/M
3300030503|Ga0311370_10579699Not Available1351Open in IMG/M
3300030531|Ga0210274_1475992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300030618|Ga0311354_10407091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1371Open in IMG/M
3300030743|Ga0265461_12288319Not Available629Open in IMG/M
3300030743|Ga0265461_12586930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia600Open in IMG/M
3300031231|Ga0170824_104901509Not Available1242Open in IMG/M
3300031231|Ga0170824_120071526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria708Open in IMG/M
3300031234|Ga0302325_11275222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii969Open in IMG/M
3300031474|Ga0170818_109677161Not Available621Open in IMG/M
3300031525|Ga0302326_11706499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria830Open in IMG/M
3300031564|Ga0318573_10719605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria536Open in IMG/M
3300031680|Ga0318574_10228450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1073Open in IMG/M
3300031747|Ga0318502_10766043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii584Open in IMG/M
3300031751|Ga0318494_10442236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria756Open in IMG/M
3300031770|Ga0318521_10364858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales857Open in IMG/M
3300031771|Ga0318546_10412137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales944Open in IMG/M
3300031778|Ga0318498_10442843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii575Open in IMG/M
3300031781|Ga0318547_10144868Not Available1393Open in IMG/M
3300031782|Ga0318552_10718304Not Available510Open in IMG/M
3300031797|Ga0318550_10221905Not Available916Open in IMG/M
3300031821|Ga0318567_10194764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1131Open in IMG/M
3300031845|Ga0318511_10604809Not Available511Open in IMG/M
3300031910|Ga0306923_11376642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii744Open in IMG/M
3300031940|Ga0310901_10392793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales603Open in IMG/M
3300031947|Ga0310909_10427594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1112Open in IMG/M
3300031947|Ga0310909_10753339Not Available807Open in IMG/M
3300031962|Ga0307479_10713660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria981Open in IMG/M
3300032001|Ga0306922_10500912Not Available1294Open in IMG/M
3300032063|Ga0318504_10234736Not Available861Open in IMG/M
3300032160|Ga0311301_11889913Not Available704Open in IMG/M
3300033289|Ga0310914_11807150Not Available515Open in IMG/M
3300033805|Ga0314864_0194819Not Available529Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.20%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland8.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.50%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.50%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.06%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.44%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.44%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.44%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.63%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012089Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300027043Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1029522523300001356Peatlands SoilAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAQQP*
Ga0062384_10008611223300004082Bog Forest SoilTWLWAGIFAVSTAGLAAAMELESVKVFLLLTTAVTVGGVVAGTFLSAFWFFRVLRRFGLRVRFAQP*
Ga0070671_10121144313300005355Switchgrass RhizosphereLAVLMYTETVKVFLLLTTAVTIGGVVAGTFLSAVWFVRVLRRSGLRVRFAQA*
Ga0070714_10140147413300005435Agricultural SoilWAGIFFVTTVGLAVLMYTETVKVFLLLTTAVTIGGVVAGSFLSAVWFVRVLRRSGLRVRFAQA*
Ga0070713_10142628323300005436Corn, Switchgrass And Miscanthus RhizosphereAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLHRFGLRVRFAQP*
Ga0070698_10104022813300005471Corn, Switchgrass And Miscanthus RhizosphereAVLMTTETVKVFLLLTTAFTIGGVVAGTFFSALWFVRVLRRFGLRVRFAQP*
Ga0070730_1102532623300005537Surface SoilALTTIGMSVMMAMESPKAFLLLTTAVTIGGVIAGTALSALWFVRVVRRFGLKVRFSS*
Ga0070731_1102999423300005538Surface SoilVSTLGLAAAMALEPVKVFMLLVTVVTVGGLVAGTGASALWFFRVLRRHGLHVRFAVG*
Ga0066703_1021504643300005568SoilTGARPARAAGAVEPATVFLLLTTAVTIGGVVAGTILSALWFIRVLRRSGLRIRFSQV*
Ga0070766_1012473743300005921SoilWAGIFAASTIGLAVLMATETVKVFLLLTTAVTIGGTVAGTFLSALWFFRVLHRFGLRVRFAAS*
Ga0075023_10040753113300006041WatershedsVGLAVLMVFETVRVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAQP*
Ga0074051_1179238823300006572SoilFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0074054_1002359513300006579SoilFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAKP*
Ga0079222_1186705723300006755Agricultural SoilVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0079220_1110151523300006806Agricultural SoilWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0075425_10229032413300006854Populus RhizosphereAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0075425_10288644113300006854Populus RhizosphereIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0075426_1138290723300006903Populus RhizosphereWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0105241_1264723913300009174Corn RhizosphereGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0116214_112200223300009520Peatlands SoilVALAVLMAIESVQVFLLLRTAVTIGGVVAGTFLSALWFIRVVRRSGLRIRFTQG*
Ga0116222_141262623300009521Peatlands SoilWLWAGIFFVSTVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAQQP*
Ga0127503_1109484423300010154SoilWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAKP*
Ga0134082_1002995923300010303Grasslands SoilFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0134064_1051242133300010325Grasslands SoilWLWAGIFAVSAAGLAAGVAIEPATVFLLLTTAVTIGGVVAGTILSALWFIRVLRRSGLRLRFSQV*
Ga0134125_1278018623300010371Terrestrial SoilVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAKP*
Ga0136449_10155302513300010379Peatlands SoilLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRSGLRVRFAQQP*
Ga0134126_1129434613300010396Terrestrial SoilTTVGLAVLMYTETVKVFLLLTTAVTIGGVVAGSFLSAVWFVRVLRRSGLRVRFAQA*
Ga0138537_104920733300011063Peatlands SoilFFVSTVGLAVLMAFETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQQP
Ga0153924_104906233300012089Attine Ant Fungus GardensAGIFALSTLGLAAAMALEPVKVFMLLVTVVTLGGIIAGSGASALWFFRVLRRHGLRVRFAVS*
Ga0137389_1117894323300012096Vadose Zone SoilFASTVGLAVLMAFETVKVFLLLTTAVTIGGVVAGTCLSAFWFVRVLRRFGLHVRFAQP*
Ga0137365_1122679513300012201Vadose Zone SoilTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLHRFGLRVRFAQP*
Ga0137399_1176790123300012203Vadose Zone SoilFAVSTVGLAVLMAFEPVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAPS*
Ga0137381_1087179813300012207Vadose Zone SoilGIFFASTVGLAVLMAFETVKVFLLLTTAVTIGGVVAGTCLSAFWFVRVLRRFGLHVRFAQP*
Ga0137378_1058947333300012210Vadose Zone SoilGLAAGVAIEPATVFLLLTTAITIGGVVAGTILSALWFIRVLRRSGLRIRFSQV*
Ga0137387_1126100213300012349Vadose Zone SoilTWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0137367_1061064713300012353Vadose Zone SoilAVSAAGLAAGVAIEPATGFLLLTTAVTIGGVVAGTILSALWFIRVLRRSGLRIRFSQV*
Ga0164301_1190627913300012960SoilWAGIFFVTTVGLAVLMTTETVKVLLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0164308_1043090113300012985SoilVLMATETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLHRFGLRVRFAQAS*
Ga0157369_1264328613300013105Corn RhizosphereTWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0181531_1007476643300014169BogLWAGIFAVSTVGLGALMAFESVKVFLLLTTAVTIGGTVAGTVASAFWFFRVLHRTGLRVRFAQP*
Ga0157380_1263511313300014326Switchgrass RhizosphereGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP*
Ga0132256_10361949313300015372Arabidopsis RhizosphereTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFASPDPGL*
Ga0182033_1164633513300016319SoilWAGIFFASTVGLAVLMAFETVKVFLLLTTAVTVGGVIAGTFLSAFWFVRVLRRFGLSVRFAKA
Ga0182037_1166284523300016404SoilFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0182038_1211340423300016445SoilWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVIAGTFLSALWFVRVLRRFGLHVRFAQP
Ga0187801_1022458913300017933Freshwater SedimentWLWAGIFFVSTVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRSGLRVRFAQQP
Ga0187809_1038027923300017937Freshwater SedimentGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQ
Ga0187817_1023549633300017955Freshwater SedimentSTVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRSGLRVRFAQQP
Ga0187778_1062323413300017961Tropical PeatlandIFAVSTAGLAAAMALEPVKVFLLLTTAVTVGGVVAGTFLSAFWFFRVLRRFGLRVRFAQP
Ga0187783_1016939113300017970Tropical PeatlandAGSTIGLAVLMALESVKVFMLLTTLVTVGGLVAGTGASVLWFVRVLRRHGLRVHFAVA
Ga0187781_1037585233300017972Tropical PeatlandGSTIGLAVLMALESVKVFMLLTTVVTVGGLVAGTGASALWFFRVLRRHGLRVRFAVG
Ga0187777_1058098923300017974Tropical PeatlandLAAAMALEPVKVFLLLTTAVTVGGVVAGTFLSAFWFFRVLRRFGLRVRFAQP
Ga0187782_1078148613300017975Tropical PeatlandIGLAVLMALESVKVFMLLTTVVTVGGLVAGTGASALWFFRVLRRHGLRVRFAVG
Ga0187823_1024472023300017993Freshwater SedimentAGIFFVSTVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRSGLRVRFAQQP
Ga0187804_1017287033300018006Freshwater SedimentGLAAAMALEPVKAFMLLTTAVTLGGIVAGTGASALWFFRVLRRHGLRVRFAVG
Ga0187863_1074718813300018034PeatlandASTAGLAAAMALEPVKAFLLLTTVVTIGGTVAGSCLSAFWFFRVLRRFGLHVRFAPQA
Ga0187883_1019383733300018037PeatlandGVLMAFEPVKVFLLLTTAVTIGGTVAGTVASAFWFFRVLHRFGLRVRFAQP
Ga0187855_1075887123300018038PeatlandVGLAVPLAFAPVKVFLLLTTAVTVGGTVAGIVLSAFWFFRVLHRFGLRVRFAQPQP
Ga0187784_1105391023300018062Tropical PeatlandTWLWAGIFAVSTAGLAAAMVLEPVKVFLLLTTVVTVGGVIAGTFLSAFWFFRVLRRFGLRVRFAQG
Ga0187773_1028929513300018064Tropical PeatlandVLMTTETVKVFLLLTTAVTIGGVIAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0187772_1102099723300018085Tropical PeatlandGLAAAMALEPVKAFMLLTTAVTVGGVVAGTGASAVWFLRVLRRFGLRVRFAQP
Ga0187769_1121159123300018086Tropical PeatlandWAGIFAGSTIGLAVLMALESVKVFMLLTTVVTVGGLVAGTGASALWFFRVLRRHGLRVRFAVG
Ga0187770_1019395513300018090Tropical PeatlandAVSTAGLAAAMVLEPVKVFLLLTTVVTVGGVIAGTFLSAFWFFRVPRRFGLRIRFAQP
Ga0179594_1018214733300020170Vadose Zone SoilGIFAVSAAGLAAGVAIEPATVFLLLTTAVTIGGVVAGTILSALWFIRVLRRSGLRIRFSQ
Ga0210406_1076165723300021168SoilVLMTTETVKVFLLLTTAFTIGGVVAGTFFSAWWFVRVLRRFGLRVRFAQP
Ga0210396_1067766033300021180SoilVLMAFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAQQP
Ga0210385_1000918173300021402SoilTWLWAGIFAASTAGLAAAMVLEPVKVFLLLTTVVTIGGVVAGTCLSAFWFFRVLRRFGLRVRFAQG
Ga0210394_1026933323300021420SoilSTAGLAAAMVLEPVKVFLLLTTAVTIGGVVAGTGASAFWFFRVLRRFGLRVRFTQP
Ga0210394_1178682323300021420SoilSTAGLAAAMVLEPVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLRRFGLRVRFVQP
Ga0210398_1040958613300021477SoilGLAAAMALEPVKVFLLLTTAVTIGGVVAGTCLSAFWFFRVLRRFGLHVRFAQPAVNL
Ga0210398_1135736213300021477SoilASTAGLAAAMVLEPVKVFLLLTTVVTIGGVVAGTCLSAFWFFRVLRRFGLRVRFAQG
Ga0210410_1007272513300021479SoilAGIFAVSTAGLAAAMVLEPVKVFLLLTTAVTIGGVVAGTGASAFWFFRVLRRFGLRVRFTQP
Ga0210409_1153875323300021559SoilLWAGIFFVTTVGLAVLMTFETVKVFLLLTTAVTVGGVVAGTFLSAFWFFRVLHRFGLRVRFAQP
Ga0126371_1352623823300021560Tropical Forest SoilWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0242675_106566123300022718SoilFATTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0242665_1020215713300022724SoilAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLHRFGLRVRFAQP
Ga0247688_103282013300024186SoilAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0228598_113441513300024227RhizosphereTWLWAGIFAVSTAGLAAAMALEPVKVFLLLTTAVTIGGVVAGTCLSAFWFFRVLRRFGLHVRFAQP
Ga0207684_1124999113300025910Corn, Switchgrass And Miscanthus RhizosphereALAIEPVKVFLLLTTAVTMGGVVAGTFLSTLWFIRVLRRSGLRVRFTPGYAIGGT
Ga0207654_1130079913300025911Corn RhizosphereLWAGIFFVSTVGLAVLMYTETVKVFLLLTTAVTIGGVVAGSFLSAVWFVRVLRRSGLRVRFAQA
Ga0207664_1043462033300025929Agricultural SoilGIFFVTTVGLAVLMYTETVKVFLLLTTAVTIGGVVAGSFLSAVWFVRVLRRSGLRVRFAQ
Ga0207664_1173193313300025929Agricultural SoilAVLMYTETVKVFLLLTTAVTIGGVVAGTFLSAVWFVRVLRRSGLRVRFAQA
Ga0209154_130362313300026317SoilTWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0207800_104228713300027043Tropical Forest SoilAVSTLGLAAAMALEPVKAFLLLSTAVTVGGVVAGTGASALWFFRVLRRCGLRVRFAQP
Ga0209115_111522623300027567Forest SoilTWLWAGIFALSTIGMSIMLVVEPTKVFLLLTTAITIGGIVAGTVLSALWFVRVLRRFGLQVRFSRA
Ga0209656_1003664023300027812Bog Forest SoilTWLWAGIFAVSTAGLAAAMALEPVKVFLLLTTAVTVGGVVAGTGASAFWFFRVLRRFGLRVRFAQP
Ga0209380_1053021523300027889SoilIFAASTAGLAAAMELEPVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLRRFGLRVRFVQP
Ga0311352_1031763813300029944PalsaALAVLMVTEPVNVFLLLTTAVTIALVIAGAGASALWFRSVLRRLGLTLRFAQPEPGS
Ga0311371_1072695223300029951PalsaWLWAGIFAATTVGLAVLMAVESVKVFLLLTTILTVGGTVAGTILSALWFVRVLHRFGLRVRFAQP
Ga0310037_1000672433300030494Peatlands SoilVALAVLMAIESVQVFLLLRTAVTIGGVVAGTFLSALWFIRVVRRSGLRIRFTQG
Ga0310037_1012793313300030494Peatlands SoilGIFFVSTVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRSGLRVRFAQQP
Ga0311370_1057969943300030503PalsaVFLLLTVALAVLMVTEPVNVFLLLTTAVTIALVIAGAGASALWFRSVLRRLGLTLRFAQPEPGS
Ga0210274_147599223300030531SoilVLMALESVKVFLLLTTAVTVGGVVAGTFLSAFWFFRVLRRFGLRVRFAQPQGS
Ga0311354_1040709143300030618PalsaFLLLTVALAVLMVTEPVNVFLLLTTAVTIALVIAGAGASALWFRSVLRRLGLTLRFAQPEPGS
Ga0265461_1228831913300030743SoilAGLAAAMVLEPVKVFLLLTTAVTIGGVVAGTGASAFWFFRVLRRFGLHVRFAQT
Ga0265461_1258693013300030743SoilFVSTVGLAVLMAFEPVKVFLLLTTAVTIGGVVAGTFLSAVWFVRVLRRFGLRVRFAQP
Ga0170824_10490150913300031231Forest SoilGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLHRFGLRVRFAQ
Ga0170824_12007152613300031231Forest SoilHVFVSTVGLALLMVFETVKVFLLLTTAVTVGGVIAGTFLSAFWFFRVLHRFGLRVRFAQP
Ga0302325_1127522223300031234PalsaVALAVLMVTEPVNVFLLLTTAVTVALVVAGAGASALWFRSVLRTLGLRLRFAQPEPGS
Ga0170818_10967716133300031474Forest SoilGIFFVTTVGLAVLMATETVKVFLLLTTAFTIGGIVAGTFLSALWFVRVLRRFGLRVRFAQ
Ga0302326_1170649913300031525PalsaTWLWAGIFAATTVGLAVLMAVESVKVFLLLTTILTIGGTVAGTILSALWFVRVLHRFGLRVRFAQP
Ga0318573_1071960523300031564SoilTVGLAVLMAIETVKVFLLLTTAVTIGGVVAGTCLSVLWFVRVLRRSGLRVRFAQP
Ga0318574_1022845023300031680SoilTWLWAGIFAASTIGLAVALALEPVQLFLLLTTAVTVGGVVAGTILSALWFARVLRRCGLRVRFAQS
Ga0318502_1076604323300031747SoilVSTVGLAVAMAFAPESLFLLLTTAVTVGGVVAGTALSALWFVRVLRRCDLRVRFTQA
Ga0318494_1044223623300031751SoilVLMAIETVKVFLLLTTAVTIGGVVAGTCLSVLWFVRVLRRSGLRVRFAQP
Ga0318521_1036485823300031770SoilMVTAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0318546_1041213723300031771SoilLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0318498_1044284313300031778SoilAVAMAFAPESLFLLLTTAVTVGGVVAGTALSALWFVRVLRRCDLRVRFTQA
Ga0318547_1014486823300031781SoilTLGLAAAMAVEPVKVFLLLTTAVTVGGVIAGTGASVLWFFRVLRRCGLRVRFAQP
Ga0318552_1071830423300031782SoilVSTAGLAAAMALEPVKVFLLLTTAVTVGGVVAGTCLSVFWFFRVLRRFGLRVRFAQP
Ga0318550_1022190513300031797SoilAVYLAVGLAIEPVRVFLLLTAAVTIGGVVAGTFLSALWFIRVLRRSGLRVRFTAGT
Ga0318567_1019476413300031821SoilTVGLAVAMAFAPESLFLLLTTAVTVGGVVAGTALSALWFVRVLRRCDLRVRFTQA
Ga0318511_1060480913300031845SoilAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0306923_1137664213300031910SoilLWAGIFAASTIGLAVALAFEPVQLFLLLTTAVTIGGVVAGTILSALWFARVLRRCGLRVRFAQA
Ga0310901_1039279323300031940SoilVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0310909_1042759413300031947SoilAVLMTTETVKVFLLLTTAVTIGGTVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0310909_1075333923300031947SoilTWLWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVIAGTFLSALWFVRVLRRFGLRVRFAQS
Ga0307479_1071366033300031962Hardwood Forest SoilWAGIFAVSTAGLAAAMVLEPVKVFLLLTTAVTIGGVVAGTGASAFWFFRVLRRFGLRVRFVQP
Ga0306922_1050091233300032001SoilSAVYLAVGLAIEPVRVFLLLTTAVTIGGVVAGTFLSALWFIRVLRRSGLRVRFTAGT
Ga0318504_1023473623300032063SoilSTLGLAAAMAVEPVKVFLLLTTAVTVGGVIAGTGASVLWFFRVLRRCGLRVRFAQP
Ga0311301_1188991313300032160Peatlands SoilVGLAVLMVFETVKVFLLLTTAVTIGGVVAGTFLSAFWFFRVLHRFGLRVRFAQQP
Ga0310914_1180715013300033289SoilWAGIFFVTTVGLAVLMTTETVKVFLLLTTAVTIGGVVAGTFLSALWFVRVLRRFGLRVRFAQP
Ga0314864_0194819_358_5223300033805PeatlandVGLAVLMAFETVKVFLLLTSAVTVGGVIAGTFLSAFWFVRVLRRFGLSVRFAKT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.