Metagenome / Metatranscriptome Family F070065

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	68 residues
Representative Sequence	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Number of Associated Samples	109
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.54 %
% of genes near scaffold ends (potentially truncated)	34.96 %
% of genes from short scaffolds (< 2000 bps)	90.24 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.236 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.382 % of family members)
Environment Ontology (ENVO)	Unclassified (30.894 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.79% β-sheet: 0.00% Coil/Unstructured: 71.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00239	Resolvase	47.97
PF13408	Zn_ribbon_recom	17.89
PF07508	Recombinase	13.01
PF00078	RVT_1	8.13
PF08241	Methyltransf_11	0.81
PF07690	MFS_1	0.81
PF02371	Transposase_20	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	60.98
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	47.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.24 %
Unclassified	root	N/A	22.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.24 %
Unclassified	root	N/A	22.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.24 %
Unclassified	root	N/A	22.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.29 %
Unclassified	root	N/A	22.76 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.16 %
Unclassified	root	N/A	22.76 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.52 %
Unclassified	root	N/A	22.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.32 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	10.57 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	5.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.76 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	10.57 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	5.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.76 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	10.57 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	5.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.76 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	10.57 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	5.69 %
Bradyrhizobium sp. 192	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 192	0.81 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10171701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300001305\|C688J14111_10244864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	562	Open in IMG/M
3300001686\|C688J18823_11014440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	526	Open in IMG/M
3300001867\|JGI12627J18819_10308781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	637	Open in IMG/M
3300001867\|JGI12627J18819_10319469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300002568\|C688J35102_119084225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	636	Open in IMG/M
3300004156\|Ga0062589_102090739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	577	Open in IMG/M
3300005160\|Ga0066820_1013471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	576	Open in IMG/M
3300005166\|Ga0066674_10331014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	716	Open in IMG/M
3300005293\|Ga0065715_10826026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300005327\|Ga0070658_11391867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	609	Open in IMG/M
3300005331\|Ga0070670_100133967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	2140	Open in IMG/M
3300005333\|Ga0070677_10162493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1049	Open in IMG/M
3300005334\|Ga0068869_100114482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	2056	Open in IMG/M
3300005335\|Ga0070666_10694980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	746	Open in IMG/M
3300005340\|Ga0070689_100526581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1015	Open in IMG/M
3300005340\|Ga0070689_101446984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300005341\|Ga0070691_10079344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1604	Open in IMG/M
3300005354\|Ga0070675_100888225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	816	Open in IMG/M
3300005355\|Ga0070671_100250214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1505	Open in IMG/M
3300005365\|Ga0070688_100368143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1056	Open in IMG/M
3300005434\|Ga0070709_10233336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1317	Open in IMG/M
3300005435\|Ga0070714_100216729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1757	Open in IMG/M
3300005436\|Ga0070713_100705440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300005438\|Ga0070701_10023958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2947	Open in IMG/M
3300005438\|Ga0070701_10721469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300005444\|Ga0070694_101014453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	689	Open in IMG/M
3300005456\|Ga0070678_100748996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	883	Open in IMG/M
3300005456\|Ga0070678_101672121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300005457\|Ga0070662_100787886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	808	Open in IMG/M
3300005546\|Ga0070696_100990370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300005564\|Ga0070664_100270492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1530	Open in IMG/M
3300005564\|Ga0070664_100688960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300005577\|Ga0068857_101936990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300005718\|Ga0068866_11349732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300005842\|Ga0068858_100869994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	881	Open in IMG/M
3300006606\|Ga0074062_10019861	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300006804\|Ga0079221_11710635	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300006806\|Ga0079220_11931810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300006954\|Ga0079219_11465676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300007076\|Ga0075435_101673802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300009098\|Ga0105245_10534835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1192	Open in IMG/M
3300009101\|Ga0105247_10309346	Not Available	1099	Open in IMG/M
3300009156\|Ga0111538_10431909	Not Available	1669	Open in IMG/M
3300009176\|Ga0105242_10354321	Not Available	1356	Open in IMG/M
3300009176\|Ga0105242_10892040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300010036\|Ga0126305_10059619	All Organisms → cellular organisms → Bacteria → Proteobacteria	2192	Open in IMG/M
3300010036\|Ga0126305_10109432	Not Available	1672	Open in IMG/M
3300010038\|Ga0126315_11051327	Not Available	548	Open in IMG/M
3300010039\|Ga0126309_10054428	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300010040\|Ga0126308_10808403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 192	650	Open in IMG/M
3300010041\|Ga0126312_10224629	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300010042\|Ga0126314_11243650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300010044\|Ga0126310_10783641	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300010044\|Ga0126310_10920287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	682	Open in IMG/M
3300010044\|Ga0126310_11444600	Not Available	562	Open in IMG/M
3300010045\|Ga0126311_11669062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	537	Open in IMG/M
3300010166\|Ga0126306_11239829	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010371\|Ga0134125_10427461	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300010371\|Ga0134125_11180473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300010373\|Ga0134128_10697858	Not Available	1127	Open in IMG/M
3300010375\|Ga0105239_10788619	Not Available	1088	Open in IMG/M
3300010400\|Ga0134122_10453257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300010401\|Ga0134121_10567417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300011106\|Ga0151489_1600602	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300012469\|Ga0150984_118626757	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	714	Open in IMG/M
3300012961\|Ga0164302_10172829	Not Available	1298	Open in IMG/M
3300012984\|Ga0164309_11922836	Not Available	507	Open in IMG/M
3300012986\|Ga0164304_11176127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300012988\|Ga0164306_10940537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300013102\|Ga0157371_10231723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1327	Open in IMG/M
3300013296\|Ga0157374_12498518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	544	Open in IMG/M
3300014488\|Ga0182001_10238252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300014497\|Ga0182008_10037370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2429	Open in IMG/M
3300014497\|Ga0182008_10241183	Not Available	930	Open in IMG/M
3300014968\|Ga0157379_12658868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	502	Open in IMG/M
3300014969\|Ga0157376_10397803	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300015200\|Ga0173480_10036964	Not Available	2130	Open in IMG/M
3300015261\|Ga0182006_1308687	Not Available	520	Open in IMG/M
3300015371\|Ga0132258_10311328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3877	Open in IMG/M
3300015373\|Ga0132257_100341462	Not Available	1808	Open in IMG/M
3300015373\|Ga0132257_101000416	Not Available	1052	Open in IMG/M
3300015374\|Ga0132255_103271042	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300017656\|Ga0134112_10494014	Not Available	518	Open in IMG/M
3300017792\|Ga0163161_10895617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	751	Open in IMG/M
3300017928\|Ga0187806_1013969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2271	Open in IMG/M
3300017933\|Ga0187801_10361847	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300017965\|Ga0190266_10087151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300018466\|Ga0190268_10058041	Not Available	1580	Open in IMG/M
3300018468\|Ga0066662_12875267	Not Available	511	Open in IMG/M
3300018476\|Ga0190274_10985393	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300018481\|Ga0190271_10364610	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300019361\|Ga0173482_10134749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300019362\|Ga0173479_10531906	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300019377\|Ga0190264_10186318	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300019377\|Ga0190264_11373259	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300021445\|Ga0182009_10092270	Not Available	1367	Open in IMG/M
3300025899\|Ga0207642_10060710	Not Available	1755	Open in IMG/M
3300025901\|Ga0207688_10056570	Not Available	2204	Open in IMG/M
3300025903\|Ga0207680_11236033	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300025906\|Ga0207699_10043025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2621	Open in IMG/M
3300025916\|Ga0207663_11607152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	523	Open in IMG/M
3300025927\|Ga0207687_10739602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300025932\|Ga0207690_11586056	Not Available	547	Open in IMG/M
3300025986\|Ga0207658_11865535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300026121\|Ga0207683_10524834	Not Available	1094	Open in IMG/M
3300027307\|Ga0209327_1060923	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027502\|Ga0209622_1022931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300028379\|Ga0268266_12018397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300028380\|Ga0268265_11070428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	799	Open in IMG/M
3300028578\|Ga0272482_10061210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300028707\|Ga0307291_1084806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300031547\|Ga0310887_10539523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300031858\|Ga0310892_10234602	Not Available	1123	Open in IMG/M
3300031908\|Ga0310900_10751471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	785	Open in IMG/M
3300031939\|Ga0308174_10054530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2714	Open in IMG/M
3300032074\|Ga0308173_10190349	Not Available	1695	Open in IMG/M
3300032122\|Ga0310895_10086359	Not Available	1247	Open in IMG/M
3300032892\|Ga0335081_11656551	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300034026\|Ga0334946_024196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300034137\|Ga0334943_014835	Not Available	1462	Open in IMG/M
3300034377\|Ga0334931_029329	Not Available	1178	Open in IMG/M
3300034817\|Ga0373948_0038435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.60%
Host-Associated	Host-Associated	37.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.98%
Plants	Host-Associated → Plants	37.40%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.01%
Freshwater	Environmental → Aquatic → Freshwater	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.28%
Loam	Environmental → Terrestrial → Soil → Loam	17.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.06%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.63%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.38%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.06%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.63%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_101717012	3300001305	Soil	MSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
C688J14111_102448641	3300001305	Soil	PLAEAPMTRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGETKKIRSK*
C688J18823_110144401	3300001686	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
JGI12627J18819_103087812	3300001867	Forest Soil	MRAEQLAEAPMARRDQQIPRLRVRASHETTRYSSRWLAEAFERLLPRVECRLAPPAERAIEPKRGASGRTKEIRSN*
JGI12627J18819_103194691	3300001867	Forest Soil	MRAEQLTEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAPPAELAIQPKRGASGRAKEIRSN*
C688J35102_1190842252	3300002568	Soil	MSRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPQPAELSTEPKSSAPGGTKKVRSK*
Ga0062589_1020907392	3300004156	Soil	MSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0066820_10134711	3300005160	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0066674_103310142	3300005166	Soil	MTRRDQQIPPLGVRASHETTRYSSQWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0065715_108260261	3300005293	Miscanthus Rhizosphere	RRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070658_113918671	3300005327	Corn Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQFGELSTEPKSGAPGEIKKIRSK*
Ga0070670_1001339672	3300005331	Switchgrass Rhizosphere	VGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0070677_101624931	3300005333	Miscanthus Rhizosphere	VLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0068869_1001144822	3300005334	Miscanthus Rhizosphere	VRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070666_106949801	3300005335	Switchgrass Rhizosphere	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0070689_1005265811	3300005340	Switchgrass Rhizosphere	IPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070689_1014469841	3300005340	Switchgrass Rhizosphere	QTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0070691_100793442	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070675_1008882251	3300005354	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0070671_1002502141	3300005355	Switchgrass Rhizosphere	VGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070688_1003681431	3300005365	Switchgrass Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070709_102333361	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GVGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070714_1002167292	3300005435	Agricultural Soil	RAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070713_1007054402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070701_100239583	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0070701_107214691	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070694_1010144532	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070678_1007489962	3300005456	Miscanthus Rhizosphere	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0070678_1016721212	3300005456	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAP
Ga0070662_1007878862	3300005457	Corn Rhizosphere	MSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPNSGAPGEIKKIRSK*
Ga0070696_1009903701	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK
Ga0070664_1002704922	3300005564	Corn Rhizosphere	ELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070664_1006889602	3300005564	Corn Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTDPKYGEPGDTEKIRRK*
Ga0068857_1019369902	3300005577	Corn Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK*
Ga0068866_113497321	3300005718	Miscanthus Rhizosphere	VGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0068858_1008699941	3300005842	Switchgrass Rhizosphere	PMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0074062_100198611	3300006606	Soil	MTRRDQQIPPLRVRASHETTRHSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0079221_117106351	3300006804	Agricultural Soil	MSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPGELSTEPKSGAPGEVKKIRSK
Ga0079220_119318101	3300006806	Agricultural Soil	QQIPPVRVRVSHETTRYSSRWLAEAFERLLPQVERRLAHPGEISTEPKGGAPGATKKIRSK*
Ga0079219_114656762	3300006954	Agricultural Soil	MRRRDQQTPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLAPPGELSTEPKSGAPSAT
Ga0075435_1016738021	3300007076	Populus Rhizosphere	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTDPKSDAPGDTKKIRSK*
Ga0105245_105348352	3300009098	Miscanthus Rhizosphere	VRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0105247_103093462	3300009101	Switchgrass Rhizosphere	PVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0111538_104319091	3300009156	Populus Rhizosphere	PPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK*
Ga0105242_103543212	3300009176	Miscanthus Rhizosphere	VRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRSK*
Ga0105242_108920402	3300009176	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0126305_100596192	3300010036	Serpentine Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPRSGIPGETKKIRSK*
Ga0126305_101094321	3300010036	Serpentine Soil	RDQQIPPLRVRVSHETTRYSSQWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126315_110513271	3300010038	Serpentine Soil	MTRRDQQIPPLRVRASHETTRYSSRWLVEAFERLLPQVERRLAQPAEPSTESKCNAPGDTKKIRSK*
Ga0126309_100544281	3300010039	Serpentine Soil	MTRRDQQIPPLRVRVSHEGTRYSRRWLAEAFERLLPQVERRLVQPGELSIEPKSSAPGETKKIRRK*
Ga0126308_108084032	3300010040	Serpentine Soil	MTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPRSGIPGETKKIRSKGPANPAFAGAGES*
Ga0126312_102246292	3300010041	Serpentine Soil	VRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126314_112436502	3300010042	Serpentine Soil	LRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSIAPRSGVPGETKQIRSK*
Ga0126310_107836411	3300010044	Serpentine Soil	MTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPGELSIALKSGAPGGTKKIRSK*
Ga0126310_109202871	3300010044	Serpentine Soil	PPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSIAPRSGVPGETKQIRSK*
Ga0126310_114446002	3300010044	Serpentine Soil	MRVELLAEAPMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0126311_116690621	3300010045	Serpentine Soil	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVARRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126306_112398292	3300010166	Serpentine Soil	MTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKNGAPGETEKIRRK*
Ga0134125_104274612	3300010371	Terrestrial Soil	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIR
Ga0134125_111804732	3300010371	Terrestrial Soil	PVAEAPMTRRDQQIPPLRVRASYETTRYSSRWLAGAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0134128_106978582	3300010373	Terrestrial Soil	MSRRNQQTPPLRARVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0105239_107886191	3300010375	Corn Rhizosphere	VGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0134122_104532572	3300010400	Terrestrial Soil	VRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0134121_105674172	3300010401	Terrestrial Soil	VRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0151489_16006021	3300011106	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGE
Ga0150984_1186267571	3300012469	Avena Fatua Rhizosphere	MTRRDQQIPPLRVRGSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0164302_101728292	3300012961	Soil	SRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0164309_119228361	3300012984	Soil	MTRRDQQIPPLRVRASHETTRHSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0164304_111761272	3300012986	Soil	VRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0164306_109405371	3300012988	Soil	GPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0157371_102317232	3300013102	Corn Rhizosphere	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0157374_124985182	3300013296	Miscanthus Rhizosphere	GVGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0182001_102382521	3300014488	Soil	MSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPSATKKIRSK*
Ga0182008_100373703	3300014497	Rhizosphere	MSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPGEIKKIRSK*
Ga0182008_102411832	3300014497	Rhizosphere	MRRRDQQTPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLVQPGELSAEPKNGAPRTIKKIRSK*
Ga0157379_126588682	3300014968	Switchgrass Rhizosphere	PVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0157376_103978032	3300014969	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0173480_100369642	3300015200	Soil	VRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0182006_13086871	3300015261	Rhizosphere	MSRRDQQTPPLRVRVSHETTRYSSQWLAEAFERLLSQVERRLVRPGELSTEPKSGAPGEIKKIRSK*
Ga0132258_103113282	3300015371	Arabidopsis Rhizosphere	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFARLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0132257_1003414622	3300015373	Arabidopsis Rhizosphere	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFARLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0132257_1010004162	3300015373	Arabidopsis Rhizosphere	MRRRDQQIPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGATKKIRSK*
Ga0132255_1032710422	3300015374	Arabidopsis Rhizosphere	MRVELLAEAPMSRRDQQTPPLRVRVSHETTRYSNRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0134112_104940141	3300017656	Grasslands Soil	MSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKNGAPGETEKIRRK
Ga0163161_108956171	3300017792	Switchgrass Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK
Ga0187806_10139692	3300017928	Freshwater Sediment	MGAEQLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGRTKEIRSS
Ga0187801_103618472	3300017933	Freshwater Sediment	MGAEQLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGTTKEIRSS
Ga0190266_100871512	3300017965	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPPGELSTEPKSGVPGATKKIRSK
Ga0190268_100580411	3300018466	Soil	EVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPRSDAPGDTKKIRSK
Ga0066662_128752671	3300018468	Grasslands Soil	MSRRDQQTPPLRVRVNHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGETKKIRSK
Ga0190274_109853932	3300018476	Soil	MTRRDQQIPPLRVRVSHETTRYSSRWRAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0190271_103646102	3300018481	Soil	MTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPPVERRLAQPVELSTEPRSGAPGGTKKIRSK
Ga0173482_101347492	3300019361	Soil	MTRRDQQIPPLRVRASYETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0173479_105319062	3300019362	Soil	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0190264_101863182	3300019377	Soil	MTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPQPGELSTEPRSGAPGGTKKIRSK
Ga0190264_113732592	3300019377	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPPVERRLAQPAELSIELKSGAPGGTKKIRSK
Ga0182009_100922701	3300021445	Soil	LLAEAPMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPGEIKKIRSK
Ga0207642_100607102	3300025899	Miscanthus Rhizosphere	MSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0207688_100565701	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK
Ga0207680_112360331	3300025903	Switchgrass Rhizosphere	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0207699_100430253	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0207663_116071522	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DQQIPPLRVRASHETTRYSSQWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK
Ga0207687_107396021	3300025927	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLGEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0207690_115860561	3300025932	Corn Rhizosphere	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0207658_118655351	3300025986	Switchgrass Rhizosphere	VRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0207683_105248342	3300026121	Miscanthus Rhizosphere	MTRRDQQIPPLRVRASYETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0209327_10609231	3300027307	Forest Soil	MARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAPPAELAIQPKRGASGRAKEIRSN
Ga0209622_10229312	3300027502	Forest Soil	MARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVECRLAPPAERAIEPKRGASGRTKEIRSN
Ga0268266_120183971	3300028379	Switchgrass Rhizosphere	TPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0268265_110704282	3300028380	Switchgrass Rhizosphere	ALTGRRGRCVGPEVRAELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0272482_100612101	3300028578	Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAELSIELKSGAPGETKKIRSK
Ga0307291_10848061	3300028707	Soil	MIRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0310887_105395231	3300031547	Soil	AEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0310892_102346022	3300031858	Soil	CVGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0310900_107514712	3300031908	Soil	MTRRDQQISPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0308174_100545302	3300031939	Soil	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK
Ga0308173_101903491	3300032074	Soil	MTRRDQQIPPLRVRVRHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK
Ga0310895_100863592	3300032122	Soil	MTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0335081_116565511	3300032892	Soil	QLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGTTKEIRSS
Ga0334946_024196_308_508	3300034026	Sub-Biocrust Soil	MTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGAIKKIRSK
Ga0334943_014835_1209_1409	3300034137	Biocrust	MSRRNQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQMERRLAQPGELSTKPKSGAPGAIKKIRSK
Ga0334931_029329_84_284	3300034377	Sub-Biocrust Soil	MSRRDQHTPPLRVRARHETTRYRSRWLAEAFERLLPQVERRLAQPGELSTKPKSGAPGEIKKIRSK
Ga0373948_0038435_293_493	3300034817	Rhizosphere Soil	MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences