Metagenome / Metatranscriptome Family F069891

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069891
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	40 residues
Representative Sequence	MTFDDILDQVIALLKRQGRVSYGAMKRRFDLDDAYLEDLK
Number of Associated Samples	94
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.33 %
% of genes near scaffold ends (potentially truncated)	85.37 %
% of genes from short scaffolds (< 2000 bps)	94.31 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (71.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.325 % of family members)
Environment Ontology (ENVO)	Unclassified (29.268 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.902 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 14NP_00910220 2ICChiseqgaiiDRAFT_06381491 3INPhiseqgaiiFebDRAFT_1003359181 4INPhiseqgaiiFebDRAFT_1008383131 5INPhiseqgaiiFebDRAFT_1055222212 6JGI11643J11755_117793241 7JGI10213J12805_102420722 8Ga0066398_101149202 9Ga0070670_1011583322 10Ga0066388_1032497352 11Ga0066388_1048304271 12Ga0066388_1053691721 13Ga0066689_107013791 14Ga0066695_108203832 15Ga0066706_111087282 16Ga0068861_1003371322 17Ga0075024_1009035081 18Ga0075432_100936571 19Ga0066665_111914102 20Ga0075421_1004670041 21Ga0075430_1001649551 22Ga0075433_111871202 23Ga0075420_1000818741 24Ga0075420_1004111031 25Ga0075420_1004784573 26Ga0075420_1010435401 27Ga0075425_1015120782 28Ga0079219_121110272 29Ga0099791_103368002 30Ga0099794_104046473 31Ga0066710_1017210673 32Ga0099829_103644691 33Ga0099828_103900711 34Ga0099827_114710282 35Ga0105245_101751331 36Ga0066709_1005187703 37Ga0066709_1014690473 38Ga0114129_132587282 39Ga0111538_112587731 40Ga0075423_112224891 41Ga0114945_105091073 42Ga0105340_15429701 43Ga0126374_105454961 44Ga0105064_11116502 45Ga0126382_121020182 46Ga0126376_105803351 47Ga0126376_124655521 48Ga0126372_104343931 49Ga0126372_116519822 50Ga0126372_123223721 51Ga0126377_107263811 52Ga0126377_109005682 53Ga0126377_130512442 54Ga0126379_107946991 55Ga0126379_122701912 56Ga0126379_128314522 57Ga0126379_132332321 58Ga0126381_1028669553 59Ga0126383_103143492 60Ga0126383_103712501 61Ga0126383_134406051 62Ga0137392_111160092 63Ga0137383_110414362 64Ga0137363_116008621 65Ga0137380_107879431 66Ga0137385_109980901 67Ga0137360_104088221 68Ga0137360_105270901 69Ga0137397_105733171 70Ga0137395_105114992 71Ga0137395_105409121 72Ga0137419_119033822 73Ga0137416_109557773 74Ga0137404_111012192 75Ga0137407_121675652 76Ga0126375_106192432 77Ga0126375_114115621 78Ga0126375_114437891 79Ga0126375_116541672 80Ga0126369_116183661 81Ga0126369_121360831 82Ga0134075_105878091 83Ga0163163_115517761 84Ga0137418_105242761 85Ga0132258_133497842 86Ga0182032_104376052 87Ga0184610_11467131 88Ga0184633_105511421 89Ga0184639_103062672 90Ga0066667_123556501 91Ga0180112_12815122 92Ga0210378_103523992 93Ga0126371_119379671 94Ga0222625_11753162 95Ga0207712_104434132 96Ga0207640_111595201 97Ga0207698_120228211 98Ga0209388_12359881 99Ga0209814_101371221 100Ga0209465_104545993 101Ga0209590_105896752 102Ga0207428_108943952 103Ga0209889_10998001 104Ga0137415_104817123 105Ga0137415_105275731 106Ga0247819_103948862 107Ga0299907_103068601 108Ga0299907_113466942 109Ga0247647_10005645 110Ga0247647_10036294 111Ga0310915_112678952 112Ga0307468_1017794942 113Ga0306921_101282771 114Ga0310910_113168191 115Ga0326597_120814312 116Ga0310890_102098742 117Ga0310890_107889151 118Ga0310890_118464491 119Ga0306924_109540061 120Ga0310896_102626781 121Ga0306920_1005492461 122Ga0214471_109196783 123Ga0247830_102207171
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 14NP_00910220 2ICChiseqgaiiDRAFT_06381491 3INPhiseqgaiiFebDRAFT_1003359181 4INPhiseqgaiiFebDRAFT_1008383131 5INPhiseqgaiiFebDRAFT_1055222212 6JGI11643J11755_117793241 7JGI10213J12805_102420722 8Ga0066398_101149202 9Ga0070670_1011583322 10Ga0066388_1032497352 11Ga0066388_1053691721 12Ga0066695_108203832 13Ga0068861_1003371322 14Ga0075024_1009035081 15Ga0075433_111871202 16Ga0075420_1010435401 17Ga0099791_103368002 18Ga0099794_104046473 19Ga0066710_1017210673 20Ga0105245_101751331 21Ga0066709_1005187703 22Ga0111538_112587731 23Ga0105340_15429701 24Ga0126372_116519822 25Ga0126377_109005682 26Ga0126379_122701912 27Ga0137380_107879431 28Ga0137385_109980901 29Ga0137397_105733171 30Ga0137404_111012192 31Ga0137418_105242761 32Ga0222625_11753162 33Ga0207428_108943952 34Ga0209889_10998001 35Ga0299907_103068601 36Ga0299907_113466942 37Ga0247647_10036294 38Ga0310915_112678952 39Ga0306921_101282771 40Ga0326597_120814312 41Ga0310890_107889151 42Ga0214471_109196783
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40 1Ga0099827_114710282 2ICChiseqgaiiDRAFT_06381491 3JGI10213J12805_102420722 4Ga0066398_101149202 5Ga0070670_1011583322 6Ga0066388_1053691721 7Ga0066695_108203832 8Ga0068861_1003371322 9Ga0075024_1009035081 10Ga0066665_111914102 11Ga0075433_111871202 12Ga0075420_1010435401 13Ga0079219_121110272 14Ga0099829_103644691 15Ga0099828_103900711 16Ga0066709_1005187703 17Ga0066709_1014690473 18Ga0111538_112587731 19Ga0105340_15429701 20Ga0105064_11116502 21Ga0126372_104343931 22Ga0126372_116519822 23Ga0126372_123223721 24Ga0126377_107263811 25Ga0126377_109005682 26Ga0126377_130512442 27Ga0126379_107946991 28Ga0126379_122701912 29Ga0126379_132332321 30Ga0126383_134406051 31Ga0137392_111160092 32Ga0137363_116008621 33Ga0137380_107879431 34Ga0137385_109980901 35Ga0137360_104088221 36Ga0137360_105270901 37Ga0137397_105733171 38Ga0137395_105114992 39Ga0137395_105409121 40Ga0137419_119033822 41Ga0137407_121675652 42Ga0126375_106192432 43Ga0126375_114437891 44Ga0137418_105242761 45Ga0132258_133497842 46Ga0184610_11467131 47Ga0184639_103062672 48Ga0210378_103523992 49Ga0126371_119379671 50Ga0209388_12359881 51Ga0209814_101371221 52Ga0209465_104545993 53Ga0209590_105896752 54Ga0207428_108943952 55Ga0137415_105275731 56Ga0247819_103948862 57Ga0299907_103068601 58Ga0299907_113466942 59Ga0247647_10036294 60Ga0306921_101282771 61Ga0326597_120814312 62Ga0310890_107889151 63Ga0310896_102626781 64Ga0306920_1005492461 65Ga0214471_109196783
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.12% β-sheet: 0.00% Coil/Unstructured: 55.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01726	LexA_DNA_bind	4.07
PF01494	FAD_binding_3	3.25
PF00903	Glyoxalase	2.44
PF13374	TPR_10	2.44
PF01070	FMN_dh	2.44
PF13424	TPR_12	1.63
PF13669	Glyoxalase_4	1.63
PF13700	DUF4158	1.63
PF04909	Amidohydro_2	1.63
PF13714	PEP_mutase	1.63

Showing 1 to 10 of 43 entries

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COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	6.50
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.25
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.25
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.25
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.44
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.44
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	1.63
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.44 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	0.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	6.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.76 %
Unclassified	root	N/A	28.46 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.63 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.44 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	6.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.13 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.63 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %
Unclassified	root	N/A	28.46 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	0.81 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	6.50 %
Candidatus Handelsmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria	2.44 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.63 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %
Unclassified	root	N/A	28.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	7.32 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.81 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.63 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.63 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	2.44 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.32 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	0.81 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.81 %
Unclassified	root	N/A	28.46 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.81 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.63 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.63 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.63 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	2.44 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.32 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.81 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.81 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	0.81 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Olavius algarvensis sulfate-reducing endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis sulfate-reducing endosymbiont	0.81 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.81 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.63 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.63 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	2.44 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.32 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.81 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.81 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	0.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Limnoglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus	0.81 %
Olavius algarvensis sulfate-reducing endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis sulfate-reducing endosymbiont	0.81 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.81 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.63 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.63 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.63 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	2.44 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.32 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.81 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.81 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	0.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Limnoglobus roseus	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	0.81 %
Olavius algarvensis sulfate-reducing endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis sulfate-reducing endosymbiont	0.81 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.81 %
Unclassified	root	N/A	28.46 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01ENX0Z	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0638149	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100335918	Not Available	1108	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100838313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1735	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105522221	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300000787\|JGI11643J11755_11779324	Not Available	722	Open in IMG/M
3300000858\|JGI10213J12805_10242072	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300004268\|Ga0066398_10114920	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005331\|Ga0070670_101158332	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005332\|Ga0066388_103249735	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M

Showing 1 to 10 of 120 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.81%
Environmental	Environmental	81.30%
Host-Associated	Host-Associated	17.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.32%
Plants	Host-Associated → Plants	17.89%
Solid Waste	Engineered → Solid Waste	0.81%
Terrestrial	Environmental → Terrestrial	73.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Grass	Engineered → Solid Waste → Grass	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.82%
Roots	Host-Associated → Plants → Roots	0.81%
Sediment	Environmental → Aquatic → Sediment	4.06%
Soil	Environmental → Terrestrial → Soil	73.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	4.06%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.44%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M

Showing 1 to 10 of 94 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_00910220	2170459021	Switchgrass, Maize And Mischanthus Litter	MTFDEILEQVIALLKRQGRVSYPALKIRFSLDDEYLEALKAELLYV
ICChiseqgaiiDRAFT_06381491	3300000033	Soil	MTFDDILDQILDLLRRQGRVSYWALKRRFDLHDDDIAGLKD
INPhiseqgaiiFebDRAFT_1003359181	3300000364	Soil	MSFDDILEQVITLLKRQGRVSYPDLKIRFTLDDEY
INPhiseqgaiiFebDRAFT_1008383131	3300000364	Soil	MDFADILEQTIALLQHQGRISYGALKRRFGLDDAYLD
INPhiseqgaiiFebDRAFT_1055222212	3300000364	Soil	MTFDDLLAQVLTLLQQQGRVSYGALKRRFGLDDAYLDDLKAELIDA
JGI11643J11755_117793241	3300000787	Soil	MTFDEIHAQITDLLKRQGRVSYGALKRRYDLDDAYL
JGI10213J12805_102420722	3300000858	Soil	MTFDEILEQVLALLKRQGRVSYSAIKRRFDLNDDYL
Ga0066398_101149202	3300004268	Tropical Forest Soil	MSFDEILAQIIEVLKTQGRVSYGALKRRYNLEDAYLDDLKDEIIHA
Ga0070670_1011583322	3300005331	Switchgrass Rhizosphere	MEFDEILTQAIELLQRQGRISYGALKRRFHLDDEHLADLK
Ga0066388_1032497352	3300005332	Tropical Forest Soil	MEFEDVLAQTIALLQRQGRISYSALKRRFQLDDTYLDDLKVELIEGV*
Ga0066388_1048304271	3300005332	Tropical Forest Soil	MTFDDILDQILDLLRRQGRVSYWALKRRFALHDDDIAGLK
Ga0066388_1053691721	3300005332	Tropical Forest Soil	MEFEAVLEQIIALLQSQGRVSYGALKRRFKLDDAYLEDLK
Ga0066689_107013791	3300005447	Soil	MEFEAVLEQTIALLQRQGRISYGALKRRFNLDDAYLEDLK
Ga0066695_108203832	3300005553	Soil	MTFDEILDQVRDLRQQRGRVSSQALKRRFELDDAYLD
Ga0066706_111087282	3300005598	Soil	MEFEAVLEQTIALLQRQGRISYGALKRRFNLDDAYLEDL
Ga0068861_1003371322	3300005719	Switchgrass Rhizosphere	MTFDEILEQVIALLWCQKRVAYGALQRRFNLDDAYLEDPKADLILL*
Ga0075024_1009035081	3300006047	Watersheds	MSFDEILDQVRELLRQRGRLSYGALKRRFDLDDAYVE
Ga0075432_100936571	3300006058	Populus Rhizosphere	MTFDDILDQILDLLRRQGRVSYWALKRRFDLHDDDIVGLK
Ga0066665_111914102	3300006796	Soil	MTFDEILDQIITLLKRQGRVSYSALKRRFDLNDDYLNDLK
Ga0075421_1004670041	3300006845	Populus Rhizosphere	MTFDDVLEQLVTLLKRQGRVSYRALKMRFNLDDEY
Ga0075430_1001649551	3300006846	Populus Rhizosphere	MTFDDILDQVITLLKRQGRVSYRALKMRFNLDDEY
Ga0075433_111871202	3300006852	Populus Rhizosphere	MTFDEILDQGITLLKRQGRVSYTALKIRFSLDDDSS*
Ga0075420_1000818741	3300006853	Populus Rhizosphere	MTFDEILEQVITLLKRQGRVLYPALKIRFSLDDEYLEALK
Ga0075420_1004111031	3300006853	Populus Rhizosphere	MEFEAVLEQTIALLQRQGRISYGALKRRFQLDDAY
Ga0075420_1004784573	3300006853	Populus Rhizosphere	MTFDDILDQVITLLKRQGRVSYSALKRRFDLDDDYL
Ga0075420_1010435401	3300006853	Populus Rhizosphere	MTFDEMLEQVITLLKRQERVSSSALKRRFDLGDDYLKDLKDELLHGG*
Ga0075425_1015120782	3300006854	Populus Rhizosphere	MTFDDLLAQVLTLLQQQGRVSYGALKRRFGLDDAYLDDLKAELI
Ga0079219_121110272	3300006954	Agricultural Soil	MTFDEILAQIIDLLKRQGRVSYPALKIRFSLDDDYLEALKA
Ga0099791_103368002	3300007255	Vadose Zone Soil	MTFDELLEQVVDLLQRQDRVSYGALKRRFALDDDYLRI*
Ga0099794_104046473	3300007265	Vadose Zone Soil	ADILEQTIVLLQHQGRISYGALKRRFSLDDAYLEDLTRLW*
Ga0066710_1017210673	3300009012	Grasslands Soil	VNFDEMLEQVLALVQRQGRVSYRALKRRFDLDDAYLEGHWFS
Ga0099829_103644691	3300009038	Vadose Zone Soil	MTFDEILTQVVELLQRQGRVSYGALKRRFALDDDY
Ga0099828_103900711	3300009089	Vadose Zone Soil	MEFAEILEQTIALLQHQGRISYGALKRRFGLHDAYL
Ga0099827_114710282	3300009090	Vadose Zone Soil	MTFDDILDQVIALLKRQGRVSYGAMKRRFDLDDAYLEDLK
Ga0105245_101751331	3300009098	Miscanthus Rhizosphere	MTFDDILDQVIALLQRQGRVSYGAMKRRFALDDAYLEDLKGEILF
Ga0066709_1005187703	3300009137	Grasslands Soil	MTFDELLTQVLDLLQRQGRVSYGARKRRFDLDGAYREYLKTEII*
Ga0066709_1014690473	3300009137	Grasslands Soil	VNFDEMLEQVLALVQRQGRVSYRALKRRFDLDDAYLEGHWFS*
Ga0114129_132587282	3300009147	Populus Rhizosphere	MTFDDILNQVIALLKRQGRVSYGAMKRRFDLDDAYLEDLK
Ga0111538_112587731	3300009156	Populus Rhizosphere	MTFDEILAQIIDLLRYQGRVSYGALKYWYTLDNAYLEDLKDVIIK
Ga0075423_112224891	3300009162	Populus Rhizosphere	VTFDDILAQVITLLKRQGRVSYPALKIRFSLDDEYLEALRAELL
Ga0114945_105091073	3300009444	Thermal Springs	MTFDDTLDQILTLLRHQGRVSYWALKRRFDLHDDDIAGLK
Ga0105340_15429701	3300009610	Soil	MDRGAAMTFMTFDEILEQVSMLLQRQKRVAYGALKRRFDLDEAYLEDLYERA*
Ga0126374_105454961	3300009792	Tropical Forest Soil	MMFDEILEQVILLLKRQGRVSYPALKIRFSLDDEYLEALK
Ga0105064_11116502	3300009821	Groundwater Sand	MTFDDVLAQVLALLQRQGRVSYGALKRRFDLDEAYLNDLKTELID
Ga0126382_121020182	3300010047	Tropical Forest Soil	MTFDEILEQVIALLKHQGRVSYPALKIRFSLDDEYLEALK
Ga0126376_105803351	3300010359	Tropical Forest Soil	MTFDELLAQVLDLLQRQGRVSYGALKRRFDLDDAYLASLKT
Ga0126376_124655521	3300010359	Tropical Forest Soil	VTFDDILAQVIALLKRQGRVSYPALKIRFSLDDEY
Ga0126372_104343931	3300010360	Tropical Forest Soil	MTFDDLLTQVLTLLQQQGRIAYGALKRRFGLDDAYLDDLKAELID
Ga0126372_116519822	3300010360	Tropical Forest Soil	MTFDEILDQVITILKRQGRVSYPALKRRFALDDTYIEALK
Ga0126372_123223721	3300010360	Tropical Forest Soil	GGSRMEFEDVLAQTIALLQRQGRISYSALKRRFQLDDTYLDDLKVELIEGV*
Ga0126377_107263811	3300010362	Tropical Forest Soil	MEFEDILEQVIALLQHQGRVSYGALKRRLKLDDDYLED
Ga0126377_109005682	3300010362	Tropical Forest Soil	VTVMTFDDILEQVIALLKRQGRVSYRALTMRFALDD
Ga0126377_130512442	3300010362	Tropical Forest Soil	MTFDEILDQVITLLKRQGRVSYPALKIRFSLDDEYLEALKAEI
Ga0126379_107946991	3300010366	Tropical Forest Soil	MTFEDILAQVLTLLQQQGRVSYGALKRRFGLDDAYLDDLKAELIDV*
Ga0126379_122701912	3300010366	Tropical Forest Soil	VDFDTLLAQITALLQRQGRVSYGALKRRFALDGDYVQDL
Ga0126379_128314522	3300010366	Tropical Forest Soil	MTFDDVLDQVIILLKRQGRVSYPALKIRFSLDDEYLEALK
Ga0126379_132332321	3300010366	Tropical Forest Soil	MTFDDVLEQVVTLLKRQGRVSYRALKMRFNLDDEYLD
Ga0126381_1028669553	3300010376	Tropical Forest Soil	VTFDDILAQVIDLLKRQGRVSYPALKIRFGLDDEYLEAL
Ga0126383_103143492	3300010398	Tropical Forest Soil	MTFDDILVQIIDLLKRQGRVSYGALKRRYHLDDAYLED
Ga0126383_103712501	3300010398	Tropical Forest Soil	MTFDEILEQVIALLKHQGRVSYPALKIRFSLDDEYLE
Ga0126383_134406051	3300010398	Tropical Forest Soil	MTFDELRAQILTLLQQQGRVSYGAVTRGYGLDEDYLDDLKAELID
Ga0137392_111160092	3300011269	Vadose Zone Soil	MTFDELLEQVIDLLQRQGRVSYGALKRRFALDDDYLRI*
Ga0137383_110414362	3300012199	Vadose Zone Soil	MTFDELLAQVLDLLQRQGRISYGALKRRFDLDDAYL
Ga0137363_116008621	3300012202	Vadose Zone Soil	MEFADILEQTSVLLQHQGRISYGALKRRFSLDDAYLEDLTRL
Ga0137380_107879431	3300012206	Vadose Zone Soil	MNGGAAMTFDDILEQVIVLLQRQRRVAYGALRRRFALDDAYLED
Ga0137385_109980901	3300012359	Vadose Zone Soil	MTFDDILEQVIALLKRQGRVSYRALRICFDLADAYLD
Ga0137360_104088221	3300012361	Vadose Zone Soil	MTFDEVLAQIIDVLKRQGRVSYGALKRRYALDDAY
Ga0137360_105270901	3300012361	Vadose Zone Soil	MEFAYTLEQTIALLHHQGRISYGALKRRFGLDDAYLEDLTRLW*
Ga0137397_105733171	3300012685	Vadose Zone Soil	MEFADVLEQTMALLEQQGRISYGALKRRFGLDDAYLDDLKIELI
Ga0137395_105114992	3300012917	Vadose Zone Soil	MEFEVVLEQTIALLQRQGRISYGALKRRFQLDDAYLEDLKVE
Ga0137395_105409121	3300012917	Vadose Zone Soil	MTFDEILVQIIDLLKSQGRVSYGAIKRRYHLDDAYLEDLK
Ga0137419_119033822	3300012925	Vadose Zone Soil	MTFDELLAQVLELLQRQGRVSYGALKRRFDLDDAYLQDLKDE
Ga0137416_109557773	3300012927	Vadose Zone Soil	ILEQTIVLLQHQGRISYGALKRRFSLDDAYLEDLTRLW*
Ga0137404_111012192	3300012929	Vadose Zone Soil	MRGGAIVTFDDILAQIIDLLKRQGRVSYSALKRRF
Ga0137407_121675652	3300012930	Vadose Zone Soil	MEFAEILTQVIELLQRQGRISYGALKRRFHLDAEYLQDLKDELI
Ga0126375_106192432	3300012948	Tropical Forest Soil	MTFDEILVQIIDLLKRQGRVSYGALKRRFDLDDDYL
Ga0126375_114115621	3300012948	Tropical Forest Soil	MTFDEILEHVITLLKRQGRVSYPALKIRFSLNDEYLEALKAELLYV
Ga0126375_114437891	3300012948	Tropical Forest Soil	MTFDDMLAHIIDLLKRQGRISYGALKRRYNLDDAYLED
Ga0126375_116541672	3300012948	Tropical Forest Soil	MTFDEILDQVITLLKRQGRVSYPALKIRFSLDDEYLE
Ga0126369_116183661	3300012971	Tropical Forest Soil	MTFDDILAQIIDLLKRQGRVSYGALKRRFDLDDAY
Ga0126369_121360831	3300012971	Tropical Forest Soil	MTFDEILEQVIALLKRQGRVSYPALKVRFSLDDEYLEALKAE
Ga0134075_105878091	3300014154	Grasslands Soil	MTFDEILEQVITLLKRQGRVSYPALKIRFSLDDEYLEA
Ga0163163_115517761	3300014325	Switchgrass Rhizosphere	MEFDEILTQAIELLQRQGRISYGALKRRFHLDDEY
Ga0137418_105242761	3300015241	Vadose Zone Soil	MTFDEILAQIIDLLKRQGRVSYSALKLRFHLDDDYLNDL
Ga0132258_133497842	3300015371	Arabidopsis Rhizosphere	MTFDEILAQITDLLKRQGRVSYGALKRRYDLDDAYLE
Ga0182032_104376052	3300016357	Soil	MTFDDILAQIIDLLKRQGRVSYSALKRRFDLNDDYLN
Ga0184610_11467131	3300017997	Groundwater Sediment	MEFDDILGQIIALLQSQGRVSYGALKRRFQLDDDYL
Ga0184633_105511421	3300018077	Groundwater Sediment	MTFDELLAHVLELLQRQGRVSYGALKRRFDLDDAYLDDLKTEL
Ga0184639_103062672	3300018082	Groundwater Sediment	MTFDELLAQVVELLQHQGRVSYGALKRRFALGDDYLQDLKDELIDAQR
Ga0066667_123556501	3300018433	Grasslands Soil	MTFDEILDQIITLLKRQGRVSYSALKRRFDLNDDYLNDLKDE
Ga0180112_12815122	3300019238	Groundwater Sediment	MTFDAILDQILDVLRHQGRVSYWALKRRFDLHDDDIA
Ga0210378_103523992	3300021073	Groundwater Sediment	MTFDDVLVQVIALLQRQGRVSYGALKRRFGLDEVYLDDLKTELIDA
Ga0126371_119379671	3300021560	Tropical Forest Soil	MTFDEILEQVIALLKRQGRVSYGALKRRFDLDDTY
Ga0222625_11753162	3300022195	Groundwater Sediment	MTFDELLAQVLELLQPQGRVSYGALKRRFSIDDAY
Ga0207712_104434132	3300025961	Switchgrass Rhizosphere	MTFDEILEQVIALLWCQKRVAYGALQRRFNLDDAYLEDPKADLILL
Ga0207640_111595201	3300025981	Corn Rhizosphere	MEFDEILAQVIELLQRQGRISYGALKRRFHLDDEY
Ga0207698_120228211	3300026142	Corn Rhizosphere	MEFDEILTQAIELLQRQGRISYGALKRRFHLDDEYLQ
Ga0209388_12359881	3300027655	Vadose Zone Soil	MTFDDILAQVIDLLKSQGRVSYGAIKRRYNLDDAYL
Ga0209814_101371221	3300027873	Populus Rhizosphere	MSFDDILEQVITLLKRQGRVSYPALKIRFTLDDEYLEA
Ga0209465_104545993	3300027874	Tropical Forest Soil	VTFDDILAQVIALLKRQGRVSYPALKIRFSLDDEYLEALKA
Ga0209590_105896752	3300027882	Vadose Zone Soil	MEFEEVLEQTIALLQHQGRVSYGALKRRFKLDDTYL
Ga0207428_108943952	3300027907	Populus Rhizosphere	MTFDELLSQITDLLQRQGRVSYGALRRRYALDDVYLQDL
Ga0209889_10998001	3300027952	Groundwater Sand	MTFDDVLVQVIALLQRQGRVSYGALNRRFGLDEVYLDDLKTEL
Ga0137415_104817123	3300028536	Vadose Zone Soil	MTFDEILAQIIDLLKRQGRVSYSALKRRFDLNDDYLNDLKDE
Ga0137415_105275731	3300028536	Vadose Zone Soil	FAYSLQQPIALLQHQGRISYGALKRRFGLDDAYLEDLTRLW
Ga0247819_103948862	3300028608	Soil	MEFADILEQIITLLQHQGRISYGALKRRFGLDDAYLDDLKIELIEA
Ga0299907_103068601	3300030006	Soil	MNFDDILEQVITLLKRQGRVSYSALRRRFEIDEAYLN
Ga0299907_113466942	3300030006	Soil	MNFDEILEQVIALLKRQGRVSYRALKMRFEEIDDEYLDVL
Ga0247647_10005645	3300030570	Soil	MTCMTFDEILEQVIMLLQRQKRVAYGALKRRFDLDDAYLEDLYEQA
Ga0247647_10036294	3300030570	Soil	MTFDDLLAHVLEILQRQGRVSYGALKRRFALDDAYLEDLK
Ga0310915_112678952	3300031573	Soil	MTFDAILAQVLDLLQHQGRVAYRALKVRFNLDNDYLEAL
Ga0307468_1017794942	3300031740	Hardwood Forest Soil	MEFEEVLEQTIALLQRQGRVSYGALKRRFKLDDAYLEDLK
Ga0306921_101282771	3300031912	Soil	MTFDEILAQIIDLLKRQGRVSYPALKIRFSLDDEYLDSIGIFIFCD
Ga0310910_113168191	3300031946	Soil	VTFDDILEQVIALLKRQGRVSYPALKIRFSLDDAYL
Ga0326597_120814312	3300031965	Soil	MTFEEILNQAIALLQRQGRVSYRTLKRQVDLDEAYVEDIKLELIEGHQV
Ga0310890_102098742	3300032075	Soil	MTFDELLSQITDLLQRQGRVSYGALRRRYALDDVYL
Ga0310890_107889151	3300032075	Soil	VTFDEILEQIIALLKRQGRVSYSALKIRFNLTDAYLEAFK
Ga0310890_118464491	3300032075	Soil	MEFEAVLEQTIALLQRQGRISYGALKRRFQLDDAYLE
Ga0306924_109540061	3300032076	Soil	MTFDEILAQIIDLLKRQGRVSYPALKIRFSLDDEYLDSIGI
Ga0310896_102626781	3300032211	Soil	MTFDELLSQITDLLQLQGRVSYGALRRRFDLDEDYLED
Ga0306920_1005492461	3300032261	Soil	MTFDAILAQVLDLLQHQGRVAYRALKVRFNLDNDYLEALKDEL
Ga0214471_109196783	3300033417	Soil	MTFDEILDQVRELLRQRGRLTYGAVKRRFDLDEAYLEDIKGELI
Ga0247830_102207171	3300033551	Soil	MTFDDILDQILDVLRRQGRVSYWALKRRFDLHDDDIAGLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters