Metagenome Family F069807

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069807
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	51 residues
Representative Sequence	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWV
Number of Associated Samples	96
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	92.68 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.041 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.260 % of family members)
Environment Ontology (ENVO)	Unclassified (35.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.350 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.74% β-sheet: 0.00% Coil/Unstructured: 60.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF12704	MacB_PCD	6.50
PF00730	HhH-GPD	3.25
PF13519	VWA_2	3.25
PF00135	COesterase	3.25
PF02687	FtsX	3.25
PF12697	Abhydrolase_6	1.63
PF13442	Cytochrome_CBB3	1.63
PF00753	Lactamase_B	1.63
PF12543	DUF3738	1.63
PF01161	PBP	1.63
PF03476	MOSC_N	0.81
PF00561	Abhydrolase_1	0.81
PF12146	Hydrolase_4	0.81
PF01850	PIN	0.81
PF01011	PQQ	0.81
PF01261	AP_endonuc_2	0.81
PF00593	TonB_dep_Rec	0.81
PF07676	PD40	0.81
PF13520	AA_permease_2	0.81
PF13669	Glyoxalase_4	0.81
PF12867	DinB_2	0.81
PF13590	DUF4136	0.81
PF07519	Tannase	0.81
PF00266	Aminotran_5	0.81
PF13360	PQQ_2	0.81
PF04972	BON	0.81
PF13565	HTH_32	0.81
PF13620	CarboxypepD_reg	0.81
PF12796	Ank_2	0.81
PF03572	Peptidase_S41	0.81
PF00375	SDF	0.81
PF17170	DUF5128	0.81
PF12695	Abhydrolase_5	0.81
PF08281	Sigma70_r4_2	0.81
PF01436	NHL	0.81
PF00756	Esterase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.25
COG0177	Endonuclease III	Replication, recombination and repair [L]	3.25
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.25
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	3.25
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	3.25
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	3.25
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.63
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.07 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.07 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.25 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.44 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.63 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.44 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.63 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.63 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.63 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.81 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.81 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.81 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.63 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.81 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.81 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.63 %
Mesorhizobium sp. CA12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. CA12	0.81 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	0.81 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.81 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.44 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.63 %
Rhizobium etli CNPAF512	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	0.81 %
Mesorhizobium sp. CA12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. CA12	0.81 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.81 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
uncultured bacterium F42-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1201776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300000891\|JGI10214J12806_11120971	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300000956\|JGI10216J12902_103487552	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300000956\|JGI10216J12902_104905080	Not Available	534	Open in IMG/M
3300000956\|JGI10216J12902_108404938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300000956\|JGI10216J12902_114073761	Not Available	1077	Open in IMG/M
3300000956\|JGI10216J12902_114468072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300001991\|JGI24743J22301_10087325	Not Available	662	Open in IMG/M
3300003319\|soilL2_10004716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1128	Open in IMG/M
3300003319\|soilL2_10229186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300004156\|Ga0062589_101724539	Not Available	626	Open in IMG/M
3300004463\|Ga0063356_103868868	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300004463\|Ga0063356_104362354	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300004463\|Ga0063356_104387503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300004463\|Ga0063356_106368688	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005295\|Ga0065707_10414451	Not Available	838	Open in IMG/M
3300005329\|Ga0070683_100955501	Not Available	822	Open in IMG/M
3300005331\|Ga0070670_101693745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005340\|Ga0070689_101288670	Not Available	658	Open in IMG/M
3300005341\|Ga0070691_10964266	Not Available	530	Open in IMG/M
3300005353\|Ga0070669_100311224	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300005364\|Ga0070673_101809718	Not Available	579	Open in IMG/M
3300005441\|Ga0070700_100977711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	694	Open in IMG/M
3300005539\|Ga0068853_100764481	Not Available	924	Open in IMG/M
3300005543\|Ga0070672_101807224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005617\|Ga0068859_100641723	Not Available	1154	Open in IMG/M
3300005840\|Ga0068870_10277122	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300005844\|Ga0068862_101810932	Not Available	620	Open in IMG/M
3300006844\|Ga0075428_100338979	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300006844\|Ga0075428_100870108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300006844\|Ga0075428_101150513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300006845\|Ga0075421_102504079	Not Available	538	Open in IMG/M
3300006846\|Ga0075430_100252892	Not Available	1460	Open in IMG/M
3300006847\|Ga0075431_102039578	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006853\|Ga0075420_101153835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	666	Open in IMG/M
3300006894\|Ga0079215_10181092	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1044	Open in IMG/M
3300006969\|Ga0075419_10048646	All Organisms → cellular organisms → Bacteria → Acidobacteria	2662	Open in IMG/M
3300006969\|Ga0075419_11511515	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009094\|Ga0111539_10016567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	9137	Open in IMG/M
3300009100\|Ga0075418_10578628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300009100\|Ga0075418_11005820	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300009100\|Ga0075418_11397500	Not Available	759	Open in IMG/M
3300009147\|Ga0114129_11499597	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01	829	Open in IMG/M
3300009147\|Ga0114129_13119643	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009156\|Ga0111538_11476464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300009162\|Ga0075423_10072913	All Organisms → cellular organisms → Bacteria	3568	Open in IMG/M
3300009162\|Ga0075423_12999937	Not Available	517	Open in IMG/M
3300009610\|Ga0105340_1200266	Not Available	840	Open in IMG/M
3300009840\|Ga0126313_11668636	Not Available	532	Open in IMG/M
3300010036\|Ga0126305_10037168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2694	Open in IMG/M
3300010040\|Ga0126308_10739733	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300010373\|Ga0134128_11700878	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	694	Open in IMG/M
3300011400\|Ga0137312_1037387	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300011423\|Ga0137436_1014165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1960	Open in IMG/M
3300011434\|Ga0137464_1153114	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012022\|Ga0120191_10028908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300012041\|Ga0137430_1190808	Not Available	589	Open in IMG/M
3300012212\|Ga0150985_122733361	Not Available	1226	Open in IMG/M
3300012495\|Ga0157323_1050403	Not Available	505	Open in IMG/M
3300012884\|Ga0157300_1122427	Not Available	504	Open in IMG/M
3300012913\|Ga0157298_10014400	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300013297\|Ga0157378_13320361	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300014326\|Ga0157380_10616093	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300014326\|Ga0157380_12031261	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300014745\|Ga0157377_10328100	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300014868\|Ga0180088_1010541	Not Available	1350	Open in IMG/M
3300015257\|Ga0180067_1030608	Not Available	1078	Open in IMG/M
3300017792\|Ga0163161_11187361	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018076\|Ga0184609_10546758	Not Available	523	Open in IMG/M
3300018422\|Ga0190265_10482315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1350	Open in IMG/M
3300018469\|Ga0190270_10160636	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300018469\|Ga0190270_10337245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1363	Open in IMG/M
3300018469\|Ga0190270_10477032	Not Available	1181	Open in IMG/M
3300018469\|Ga0190270_10555186	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1108	Open in IMG/M
3300018481\|Ga0190271_10168979	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2138	Open in IMG/M
3300018481\|Ga0190271_10958766	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300018481\|Ga0190271_12943418	Not Available	572	Open in IMG/M
3300018481\|Ga0190271_13806420	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300019356\|Ga0173481_10332080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	719	Open in IMG/M
3300019362\|Ga0173479_10802822	Not Available	521	Open in IMG/M
3300019377\|Ga0190264_12273061	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300022886\|Ga0247746_1051982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	945	Open in IMG/M
3300025290\|Ga0207673_1069716	Not Available	501	Open in IMG/M
3300025893\|Ga0207682_10002461	All Organisms → cellular organisms → Bacteria → Acidobacteria	8289	Open in IMG/M
3300025903\|Ga0207680_10149009	Not Available	1558	Open in IMG/M
3300025908\|Ga0207643_10268645	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300025930\|Ga0207701_10184861	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300025930\|Ga0207701_10292291	Not Available	1416	Open in IMG/M
3300025930\|Ga0207701_10730378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. CA12	837	Open in IMG/M
3300025932\|Ga0207690_11207704	Not Available	631	Open in IMG/M
3300025936\|Ga0207670_10002097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10423	Open in IMG/M
3300025936\|Ga0207670_10671564	Not Available	856	Open in IMG/M
3300025940\|Ga0207691_10693231	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300025972\|Ga0207668_10657528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300026041\|Ga0207639_10674685	Not Available	957	Open in IMG/M
3300026075\|Ga0207708_11323348	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300026089\|Ga0207648_10306760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1424	Open in IMG/M
3300026118\|Ga0207675_100533767	Not Available	1171	Open in IMG/M
3300027513\|Ga0208685_1111614	Not Available	587	Open in IMG/M
3300027907\|Ga0207428_10118722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2029	Open in IMG/M
3300027909\|Ga0209382_11295396	Not Available	739	Open in IMG/M
3300028380\|Ga0268265_12042205	Not Available	580	Open in IMG/M
3300028380\|Ga0268265_12407259	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031198\|Ga0307500_10150222	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031538\|Ga0310888_10630876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	652	Open in IMG/M
3300031547\|Ga0310887_10977580	Not Available	539	Open in IMG/M
3300031562\|Ga0310886_10027116	All Organisms → cellular organisms → Bacteria → Acidobacteria	2373	Open in IMG/M
3300031740\|Ga0307468_101153683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300031824\|Ga0307413_12070261	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300031854\|Ga0310904_11385694	Not Available	511	Open in IMG/M
3300031908\|Ga0310900_10487364	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300031911\|Ga0307412_11609281	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300032000\|Ga0310903_10142844	Not Available	1071	Open in IMG/M
3300032005\|Ga0307411_11060918	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300032012\|Ga0310902_10884873	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032013\|Ga0310906_10990894	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300032017\|Ga0310899_10563584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300032017\|Ga0310899_10658850	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300032075\|Ga0310890_10906139	Not Available	704	Open in IMG/M
3300032122\|Ga0310895_10246333	Not Available	824	Open in IMG/M
3300032157\|Ga0315912_10727164	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300033551\|Ga0247830_10679529	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300034690\|Ga0364923_0227958	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.28%
Host-Associated	Host-Associated	44.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.97%
Plants	Host-Associated → Plants	44.72%
Aquatic	Environmental → Aquatic	7.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.45%
Sediment	Environmental → Aquatic → Sediment	7.32%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.32%
Loam	Environmental → Terrestrial → Soil → Loam	5.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.06%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.44%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_12017761	3300000881	Soil	MRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWV
JGI10214J12806_111209711	3300000891	Soil	MRHIRVLMLLGAAIGIVTPLGAAGRAEPIQAQNEAPPPQGFRIIGNIYWVGGEYG
JGI10216J12902_1034875521	3300000956	Soil	MRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRIIGNIYWVGGEY
JGI10216J12902_1049050801	3300000956	Soil	MRQVSGLMLAAAIGMMAPLGAAGRAEPIQAQNQPP
JGI10216J12902_1084049382	3300000956	Soil	MRQISALMLLAAAIGFTAPLDAAGRVEPVQAQNQAPPPPEGFRIIGNIYWVG
JGI10216J12902_1140737612	3300000956	Soil	MRQISALMLLGAAIGMMATPAAAGRVEPIQAQNQAPPP
JGI10216J12902_1144680722	3300000956	Soil	MRRISALMLLGAAIGIMAPPGAAGRVEPIQAQNQARPP
JGI24743J22301_100873252	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYG
soilL2_100047161	3300003319	Sugarcane Root And Bulk Soil	MRQISAVMVLGAAIGIMAPLGAAGRVEPMQAQNQAPPPEGFRIIG
soilL2_102291863	3300003319	Sugarcane Root And Bulk Soil	MRQISALLLLSAAIGTVAPLRAVGRVEPIQTRNQAPPPQGFRIIGNIYWV
Ga0062589_1017245391	3300004156	Soil	MRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAAPPEGFRIIGNIYWVGGEYG
Ga0063356_1038688682	3300004463	Arabidopsis Thaliana Rhizosphere	MRQLGAFMLLSAAIGNVGPLGDATRRVAFIQAQNQAPPAGFRIIGNIYWVGGEYGSYLITTPQGHVLHDTG
Ga0063356_1043623541	3300004463	Arabidopsis Thaliana Rhizosphere	MRQISALMLLGAAIAIMAPRGAAGRAEPAQAQNQTRPPEGFRIIGNIYWVGGEYG
Ga0063356_1043875031	3300004463	Arabidopsis Thaliana Rhizosphere	MRRISALMLLGAAIGIMAPPGAAGRVEPIQAQNQARPPEGFR
Ga0063356_1063686881	3300004463	Arabidopsis Thaliana Rhizosphere	MRQIGALMLLGAAIGMVPPLGAAGRVEAQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0065707_104144511	3300005295	Switchgrass Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGG
Ga0070683_1009555012	3300005329	Corn Rhizosphere	MRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYW
Ga0070670_1016937451	3300005331	Switchgrass Rhizosphere	MRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRIIGNIYWVG
Ga0070689_1012886702	3300005340	Switchgrass Rhizosphere	MRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSY
Ga0070691_109642661	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRI
Ga0070669_1003112241	3300005353	Switchgrass Rhizosphere	MRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLI
Ga0070673_1018097182	3300005364	Switchgrass Rhizosphere	MRQISALMLLGAAIGMTAPLDAAGRVERMQAQNQAPPPEGFRIIGNIYWVGG
Ga0070700_1009777111	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRQVSALMLGAAIGMLAPLGAAGRAESDQAPNQSPAPGGFRIIGNI
Ga0068853_1007644812	3300005539	Corn Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEG
Ga0070672_1018072241	3300005543	Miscanthus Rhizosphere	MRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0068859_1006417232	3300005617	Switchgrass Rhizosphere	MRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVG
Ga0068870_102771221	3300005840	Miscanthus Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLDPVQAQNQAPPPEGFRIIGNIYW
Ga0068862_1018109322	3300005844	Switchgrass Rhizosphere	MRQLSRLMLLGAAIGIVGPLGAAGRVEPIQAQNQA
Ga0075428_1003389791	3300006844	Populus Rhizosphere	MRQVRALMLGAAIGIMAPIGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGGEYGSYLI
Ga0075428_1008701081	3300006844	Populus Rhizosphere	MRQISALMLLGAAIGIMAPLGAAAAVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0075428_1011505132	3300006844	Populus Rhizosphere	MRQISALMLLGAAIGIMAPLAAAGRVEPIQAQNQAPPPTGFRIIGNIYWVGGEYGSYLI
Ga0075421_1025040792	3300006845	Populus Rhizosphere	MRQVSALMLGAAIGMIAPLGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGGEYG
Ga0075430_1002528922	3300006846	Populus Rhizosphere	MRQFSALMLLGAAIGIMAPLGAAERVEPIQAQNEAPPPQGFRIIGNIY
Ga0075431_1020395781	3300006847	Populus Rhizosphere	MRQFSALMLLGAAIGIMAPLGAAERVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0075420_1011538352	3300006853	Populus Rhizosphere	MRQIRALMLLGAAVGIAAPLGAAGRVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLI
Ga0079215_101810923	3300006894	Agricultural Soil	MRQLSTLMLLGAAIGMTAPLGAAGRVEPLQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0075419_100486461	3300006969	Populus Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYW
Ga0075419_115115151	3300006969	Populus Rhizosphere	MRQISALMLLGAAIGIVAPLGAAGRIQAQNQERPPEGFRIIGNIYW
Ga0111539_100165677	3300009094	Populus Rhizosphere	MRQFSALMLLGAAIGIMAPLGAAARVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTP
Ga0075418_105786282	3300009100	Populus Rhizosphere	MRQISALMLLGAAIGIMAPLAAAGRVEPIQAQNQAPPPTGFRIIGNIYWVGGEYGSYLIT
Ga0075418_110058201	3300009100	Populus Rhizosphere	MRQIGALMLLGAAIGMVPPLGAAGRVEAQAQNQAPPPEGFRIIGNIYWVGGEYGSYL
Ga0075418_113975001	3300009100	Populus Rhizosphere	MRQISKLMLLAAAIGIVAPLGAAGRVAIQAQNQAPPPEGFRIIGNIYWVGGEY
Ga0114129_114995972	3300009147	Populus Rhizosphere	MRQIRALMLLGAAIGITTPLGAAGRVEPIQAQNEAPPPEGFRIIGNIYWVGG
Ga0114129_131196432	3300009147	Populus Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPIQAQSQARPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0111538_114764642	3300009156	Populus Rhizosphere	MRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTP
Ga0075423_100729133	3300009162	Populus Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIG
Ga0075423_129999371	3300009162	Populus Rhizosphere	MRQIRALILLGAAIGIMAPLGAAGRVEPIQAQNEAPPPEGFRII
Ga0105340_12002661	3300009610	Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQERPPEGFRIIGNIYWVGGEYGSY
Ga0126313_116686361	3300009840	Serpentine Soil	MRQISALMLLGAAIGMMAPLGAAGRLEPIQAQNQARPPEGFRIIGNIYWV
Ga0126305_100371681	3300010036	Serpentine Soil	MRQVSALMLGAAIGMMSPLGAAGRADARQVQNQAPPPGGFRIIGNIYWVGGEYGSY
Ga0126308_107397332	3300010040	Serpentine Soil	MRQVSALMLGAAIGMMSPLGAAERAEPIQAQNQAPPPGGFRIIGNIFWVGGEYGSYLI
Ga0134128_117008781	3300010373	Terrestrial Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIIGSAASMARI*
Ga0137312_10373872	3300011400	Soil	MTQIRALMWLGVAIAIVALLGAAGRVEPIEAQGQAPPPEGFR
Ga0137436_10141651	3300011423	Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWV
Ga0137464_11531142	3300011434	Soil	MRQISALMLLGAAIGIVAPLGAAGRVEPIQAQNQARP
Ga0120191_100289083	3300012022	Terrestrial	MRQISALMLLGAAIGIMAPLGAAGRVEPVQAQNQASPPEAFRIIGNIYWVGGEYGSFLVTTPPGATPH
Ga0137430_11908081	3300012041	Soil	MRQISALMLLGTAIGVMAPLGAAGRVEPLQAQNQAPPPEGFRI
Ga0150985_1227333611	3300012212	Avena Fatua Rhizosphere	MRQIRALMLLGAAIGIMAPPVASGRVEPTQARDEAPPPEGFR
Ga0157323_10504032	3300012495	Arabidopsis Rhizosphere	MRQISALMLFGAAIGIMASLGAAGLVEPLQAQNQAPPPEGFRIIG
Ga0157300_11224271	3300012884	Soil	MRQISALMLLGAAIGIVAPLGVPGSVEPVHAQNQTPPP
Ga0157298_100144001	3300012913	Soil	MPQVRALMCLGVAIVIVAALGAAGRVEPIQAQEQAPPPEGFRII
Ga0157378_133203611	3300013297	Miscanthus Rhizosphere	MRQISALMLLGAAIWNMAPLGAAGRVEPIQAQNQERPPEGFRIIGNIYWVGGEYGSY
Ga0157380_106160931	3300014326	Switchgrass Rhizosphere	MRQISALMLLGAAIGIMAPLGAAGRVEPFQAQNQPPPPEGFRII
Ga0157380_120312612	3300014326	Switchgrass Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIGN
Ga0157377_103281002	3300014745	Miscanthus Rhizosphere	MRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAAPPEGFR
Ga0180088_10105411	3300014868	Soil	MRQISALMLLGAAIGIVAPLGAAGRAEPSQAQNQAPPPEGFRIIGN
Ga0180067_10306081	3300015257	Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEG
Ga0163161_111873611	3300017792	Switchgrass Rhizosphere	MRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWV
Ga0184609_105467581	3300018076	Groundwater Sediment	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQALPPEGFR
Ga0190265_104823152	3300018422	Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGFRIIGSIYWVGGEYG
Ga0190270_101606361	3300018469	Soil	MRQISVLMLLGAAIGIVAPLGAAGRVEPSQAQNQAPPPEGFRIIGNIYWVGGEYG
Ga0190270_103372451	3300018469	Soil	MRQVSAWMLGAAIGMMAPLGAAGRAEPLQAQNQAPPPGGFRIIGNIYWVGGE
Ga0190270_104770322	3300018469	Soil	MRRVSALMLGAAIGMMAPLGAAGRAEPLQAQNQAPPPGGSRTNANVYSVPGEYGSYLITTPQGDI
Ga0190270_105551862	3300018469	Soil	MRQIGALMLVGVAIVITAPFGAAEGEEAVPAQNQAPPPEGFRVIGNIYWVGGER
Ga0190271_101689792	3300018481	Soil	MRQIGALMLLGVAIVITAPFGAAEGEEAVPAQNQAPPPEGFRVIGNIYWVGGER
Ga0190271_109587662	3300018481	Soil	MRQISALILLGAAIGITAPLDAAGRVEPVQAQNQAPPPEGFRIIGNIYWV
Ga0190271_129434182	3300018481	Soil	MRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAPPPEGFRI
Ga0190271_138064201	3300018481	Soil	MRQLSALMLVGAAIVFMVPLGAGGNVEAIQAQNQAPPQG
Ga0173481_103320802	3300019356	Soil	MRQVSALMLGAAIGMMAPLGAGGRAEPIQAPKQAPAPGGFRIIGN
Ga0173479_108028222	3300019362	Soil	MRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAD
Ga0190264_122730611	3300019377	Soil	MRQISALMLLGAAIGIMGPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGESGSYLITTP
Ga0247746_10519823	3300022886	Soil	MRQLSRLMLVSAAIVFMVPLGASGRVETIQAQSQAPPPQGFRIIGNIYWVGGEYGSYLITTPQGHILH
Ga0207673_10697162	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207682_100024615	3300025893	Miscanthus Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEAVQAQNQAPPPEGFRIIGNIYWVGGEY
Ga0207680_101490092	3300025903	Switchgrass Rhizosphere	MRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207643_102686452	3300025908	Miscanthus Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLDPVQAQNQAPPPEGFRIIGNIYWVG
Ga0207701_101848614	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGG
Ga0207701_102922911	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGG
Ga0207701_107303781	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRQISAVMLGAAIGMMAPLGAAGRAEPVQAGNQAPPPEGFR
Ga0207690_112077041	3300025932	Corn Rhizosphere	MRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSYLI
Ga0207670_100020971	3300025936	Switchgrass Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSYLITTPQG
Ga0207670_106715642	3300025936	Switchgrass Rhizosphere	MRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207691_106932312	3300025940	Miscanthus Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRII
Ga0207668_106575282	3300025972	Switchgrass Rhizosphere	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQHQTPPPEAFRIIGNIYWVG
Ga0207639_106746852	3300026041	Corn Rhizosphere	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVG
Ga0207708_113233482	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRISALMLVGAAIGMMALLGAAGRVDPMQAQNAPPPEGFRIIGNIYWV
Ga0207648_103067603	3300026089	Miscanthus Rhizosphere	MRQIRALILLGAAVGMVATLGAVGRLEPVQARNEAPPPEGFRIIANIYWV
Ga0207675_1005337671	3300026118	Switchgrass Rhizosphere	MRQISALMLLGAAIGTMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0208685_11116141	3300027513	Soil	MRQISALMLLGAAIGIMEPLGAAGRVEPIQAQNQA
Ga0207428_101187221	3300027907	Populus Rhizosphere	MRQISALMVLGAAIGITAPLGAAGRVEPIQGQNQAPPPEGFRIIGNIY
Ga0209382_112953961	3300027909	Populus Rhizosphere	MRQVSALMLGAAIGMIAPLGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGG
Ga0268265_120422051	3300028380	Switchgrass Rhizosphere	MRQLSRLMLLGAAIGIVGPLGAAGRVEPIQAQNQARPPE
Ga0268265_124072591	3300028380	Switchgrass Rhizosphere	MRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0307500_101502221	3300031198	Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWVGGEYGSYLITTPQG
Ga0310888_106308761	3300031538	Soil	MRQFSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNI
Ga0310887_109775801	3300031547	Soil	MRQISALLLVGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGF
Ga0310886_100271161	3300031562	Soil	MRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFR
Ga0307468_1011536831	3300031740	Hardwood Forest Soil	MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0307413_120702611	3300031824	Rhizosphere	MRQISALMLLGGAIGILASLGAAARGEPVQAQNQAPPPQGFRIIGNIYWVGGEYG
Ga0310904_113856941	3300031854	Soil	MGQIRALMLLGAAIGIMAPLGAAGRVEPIQAQNRAAPPAGFP
Ga0310900_104873642	3300031908	Soil	MRRISALMLLVAAIGTLAPLGAASLQAQNQARPPEGFRIIGNIYWV
Ga0307412_116092811	3300031911	Rhizosphere	MPQIRALMWLGVAMAIVAASGRGNPVHAQNQVPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0310903_101428442	3300032000	Soil	MRQISALLLVGAAIGIMAPLGASGRVEPIQAQNQA
Ga0307411_110609181	3300032005	Rhizosphere	MRQVSALMLGAAIGMMSPLGAAGRAEPMQAQNQAPPPGGFRIIGNIYWVGGEYGSYLITTPQ
Ga0310902_108848731	3300032012	Soil	MRQISALLVGAAIGIMVPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0310906_109908941	3300032013	Soil	MRRISALMLLVAAIGTLAPLGAASLQAQNQARPPEGFRIIGNIYWVGGEYGSYLIT
Ga0310899_105635842	3300032017	Soil	MRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLI
Ga0310899_106588501	3300032017	Soil	MRQFSALMLLGAAIGIMAPLGAAGRVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTPQGHI
Ga0310890_109061391	3300032075	Soil	MRQISALMLLGVAIGIMAPLGAAGRVEAVQAQNQAPPPEGFRIIGNIYWVGG
Ga0310895_102463332	3300032122	Soil	MGQIRALMLLGAAIGIMAPLGAAGRVEPIQAQNRAAPPAGFRIIGNIYWVGGEYGSY
Ga0315912_107271641	3300032157	Soil	MRQISALMLFLTAIGSVAPLGAAERVEAIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0247830_106795291	3300033551	Soil	MRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0364923_0227958_373_504	3300034690	Sediment	MPQIGALMRLGVAIAIVALLGAAGRVEPIQAQGQAPPPEGFRII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069807

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences