NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F069807

Metagenome Family F069807

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069807
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 51 residues
Representative Sequence MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWV
Number of Associated Samples 96
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.56 %
% of genes from short scaffolds (< 2000 bps) 92.68 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.041 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(16.260 % of family members)
Environment Ontology (ENVO) Unclassified
(35.772 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.350 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74
1JGI10215J12807_12017761
2JGI10214J12806_111209711
3JGI10216J12902_1034875521
4JGI10216J12902_1049050801
5JGI10216J12902_1084049382
6JGI10216J12902_1140737612
7JGI10216J12902_1144680722
8JGI24743J22301_100873252
9soilL2_100047161
10soilL2_102291863
11Ga0062589_1017245391
12Ga0063356_1038688682
13Ga0063356_1043623541
14Ga0063356_1043875031
15Ga0063356_1063686881
16Ga0065707_104144511
17Ga0070683_1009555012
18Ga0070670_1016937451
19Ga0070689_1012886702
20Ga0070691_109642661
21Ga0070669_1003112241
22Ga0070673_1018097182
23Ga0070700_1009777111
24Ga0068853_1007644812
25Ga0070672_1018072241
26Ga0068859_1006417232
27Ga0068870_102771221
28Ga0068862_1018109322
29Ga0075428_1003389791
30Ga0075428_1008701081
31Ga0075428_1011505132
32Ga0075421_1025040792
33Ga0075430_1002528922
34Ga0075431_1020395781
35Ga0075420_1011538352
36Ga0079215_101810923
37Ga0075419_100486461
38Ga0075419_115115151
39Ga0111539_100165677
40Ga0075418_105786282
41Ga0075418_110058201
42Ga0075418_113975001
43Ga0114129_114995972
44Ga0114129_131196432
45Ga0111538_114764642
46Ga0075423_100729133
47Ga0075423_129999371
48Ga0105340_12002661
49Ga0126313_116686361
50Ga0126305_100371681
51Ga0126308_107397332
52Ga0134128_117008781
53Ga0137312_10373872
54Ga0137436_10141651
55Ga0137464_11531142
56Ga0120191_100289083
57Ga0137430_11908081
58Ga0150985_1227333611
59Ga0157323_10504032
60Ga0157300_11224271
61Ga0157298_100144001
62Ga0157378_133203611
63Ga0157380_106160931
64Ga0157380_120312612
65Ga0157377_103281002
66Ga0180088_10105411
67Ga0180067_10306081
68Ga0163161_111873611
69Ga0184609_105467581
70Ga0190265_104823152
71Ga0190270_101606361
72Ga0190270_103372451
73Ga0190270_104770322
74Ga0190270_105551862
75Ga0190271_101689792
76Ga0190271_109587662
77Ga0190271_129434182
78Ga0190271_138064201
79Ga0173481_103320802
80Ga0173479_108028222
81Ga0190264_122730611
82Ga0247746_10519823
83Ga0207673_10697162
84Ga0207682_100024615
85Ga0207680_101490092
86Ga0207643_102686452
87Ga0207701_101848614
88Ga0207701_102922911
89Ga0207701_107303781
90Ga0207690_112077041
91Ga0207670_100020971
92Ga0207670_106715642
93Ga0207691_106932312
94Ga0207668_106575282
95Ga0207639_106746852
96Ga0207708_113233482
97Ga0207648_103067603
98Ga0207675_1005337671
99Ga0208685_11116141
100Ga0207428_101187221
101Ga0209382_112953961
102Ga0268265_120422051
103Ga0268265_124072591
104Ga0307500_101502221
105Ga0310888_106308761
106Ga0310887_109775801
107Ga0310886_100271161
108Ga0307468_1011536831
109Ga0307413_120702611
110Ga0310904_113856941
111Ga0310900_104873642
112Ga0307412_116092811
113Ga0310903_101428442
114Ga0307411_110609181
115Ga0310902_108848731
116Ga0310906_109908941
117Ga0310899_105635842
118Ga0310899_106588501
119Ga0310890_109061391
120Ga0310895_102463332
121Ga0315912_107271641
122Ga0247830_106795291
123Ga0364923_0227958_373_504
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 39.74%    β-sheet: 0.00%    Coil/Unstructured: 60.26%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWVSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
65.0%35.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Soil
Terrestrial Soil
Serpentine Soil
Terrestrial
Switchgrass Rhizosphere
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Sediment
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
6.5%13.0%5.7%10.6%4.1%3.3%16.3%4.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10215J12807_120177613300000881SoilMRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWV
JGI10214J12806_1112097113300000891SoilMRHIRVLMLLGAAIGIVTPLGAAGRAEPIQAQNEAPPPQGFRIIGNIYWVGGEYG
JGI10216J12902_10348755213300000956SoilMRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRIIGNIYWVGGEY
JGI10216J12902_10490508013300000956SoilMRQVSGLMLAAAIGMMAPLGAAGRAEPIQAQNQPP
JGI10216J12902_10840493823300000956SoilMRQISALMLLAAAIGFTAPLDAAGRVEPVQAQNQAPPPPEGFRIIGNIYWVG
JGI10216J12902_11407376123300000956SoilMRQISALMLLGAAIGMMATPAAAGRVEPIQAQNQAPPP
JGI10216J12902_11446807223300000956SoilMRRISALMLLGAAIGIMAPPGAAGRVEPIQAQNQARPP
JGI24743J22301_1008732523300001991Corn, Switchgrass And Miscanthus RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYG
soilL2_1000471613300003319Sugarcane Root And Bulk SoilMRQISAVMVLGAAIGIMAPLGAAGRVEPMQAQNQAPPPEGFRIIG
soilL2_1022918633300003319Sugarcane Root And Bulk SoilMRQISALLLLSAAIGTVAPLRAVGRVEPIQTRNQAPPPQGFRIIGNIYWV
Ga0062589_10172453913300004156SoilMRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAAPPEGFRIIGNIYWVGGEYG
Ga0063356_10386886823300004463Arabidopsis Thaliana RhizosphereMRQLGAFMLLSAAIGNVGPLGDATRRVAFIQAQNQAPPAGFRIIGNIYWVGGEYGSYLITTPQGHVLHDTG
Ga0063356_10436235413300004463Arabidopsis Thaliana RhizosphereMRQISALMLLGAAIAIMAPRGAAGRAEPAQAQNQTRPPEGFRIIGNIYWVGGEYG
Ga0063356_10438750313300004463Arabidopsis Thaliana RhizosphereMRRISALMLLGAAIGIMAPPGAAGRVEPIQAQNQARPPEGFR
Ga0063356_10636868813300004463Arabidopsis Thaliana RhizosphereMRQIGALMLLGAAIGMVPPLGAAGRVEAQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0065707_1041445113300005295Switchgrass RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGG
Ga0070683_10095550123300005329Corn RhizosphereMRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYW
Ga0070670_10169374513300005331Switchgrass RhizosphereMRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRIIGNIYWVG
Ga0070689_10128867023300005340Switchgrass RhizosphereMRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSY
Ga0070691_1096426613300005341Corn, Switchgrass And Miscanthus RhizosphereMRQISALILLGAAIGIVAPLGAAGRVEPIQAQNQAPPSEGFRI
Ga0070669_10031122413300005353Switchgrass RhizosphereMRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLI
Ga0070673_10180971823300005364Switchgrass RhizosphereMRQISALMLLGAAIGMTAPLDAAGRVERMQAQNQAPPPEGFRIIGNIYWVGG
Ga0070700_10097771113300005441Corn, Switchgrass And Miscanthus RhizosphereMRQVSALMLGAAIGMLAPLGAAGRAESDQAPNQSPAPGGFRIIGNI
Ga0068853_10076448123300005539Corn RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEG
Ga0070672_10180722413300005543Miscanthus RhizosphereMRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0068859_10064172323300005617Switchgrass RhizosphereMRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVG
Ga0068870_1027712213300005840Miscanthus RhizosphereMRQISALILLGAAIGMTTPLGAAGFLDPVQAQNQAPPPEGFRIIGNIYW
Ga0068862_10181093223300005844Switchgrass RhizosphereMRQLSRLMLLGAAIGIVGPLGAAGRVEPIQAQNQA
Ga0075428_10033897913300006844Populus RhizosphereMRQVRALMLGAAIGIMAPIGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGGEYGSYLI
Ga0075428_10087010813300006844Populus RhizosphereMRQISALMLLGAAIGIMAPLGAAAAVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0075428_10115051323300006844Populus RhizosphereMRQISALMLLGAAIGIMAPLAAAGRVEPIQAQNQAPPPTGFRIIGNIYWVGGEYGSYLI
Ga0075421_10250407923300006845Populus RhizosphereMRQVSALMLGAAIGMIAPLGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGGEYG
Ga0075430_10025289223300006846Populus RhizosphereMRQFSALMLLGAAIGIMAPLGAAERVEPIQAQNEAPPPQGFRIIGNIY
Ga0075431_10203957813300006847Populus RhizosphereMRQFSALMLLGAAIGIMAPLGAAERVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0075420_10115383523300006853Populus RhizosphereMRQIRALMLLGAAVGIAAPLGAAGRVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLI
Ga0079215_1018109233300006894Agricultural SoilMRQLSTLMLLGAAIGMTAPLGAAGRVEPLQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0075419_1004864613300006969Populus RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYW
Ga0075419_1151151513300006969Populus RhizosphereMRQISALMLLGAAIGIVAPLGAAGRIQAQNQERPPEGFRIIGNIYW
Ga0111539_1001656773300009094Populus RhizosphereMRQFSALMLLGAAIGIMAPLGAAARVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTP
Ga0075418_1057862823300009100Populus RhizosphereMRQISALMLLGAAIGIMAPLAAAGRVEPIQAQNQAPPPTGFRIIGNIYWVGGEYGSYLIT
Ga0075418_1100582013300009100Populus RhizosphereMRQIGALMLLGAAIGMVPPLGAAGRVEAQAQNQAPPPEGFRIIGNIYWVGGEYGSYL
Ga0075418_1139750013300009100Populus RhizosphereMRQISKLMLLAAAIGIVAPLGAAGRVAIQAQNQAPPPEGFRIIGNIYWVGGEY
Ga0114129_1149959723300009147Populus RhizosphereMRQIRALMLLGAAIGITTPLGAAGRVEPIQAQNEAPPPEGFRIIGNIYWVGG
Ga0114129_1311964323300009147Populus RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPIQAQSQARPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0111538_1147646423300009156Populus RhizosphereMRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTP
Ga0075423_1007291333300009162Populus RhizosphereMRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIG
Ga0075423_1299993713300009162Populus RhizosphereMRQIRALILLGAAIGIMAPLGAAGRVEPIQAQNEAPPPEGFRII
Ga0105340_120026613300009610SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQERPPEGFRIIGNIYWVGGEYGSY
Ga0126313_1166863613300009840Serpentine SoilMRQISALMLLGAAIGMMAPLGAAGRLEPIQAQNQARPPEGFRIIGNIYWV
Ga0126305_1003716813300010036Serpentine SoilMRQVSALMLGAAIGMMSPLGAAGRADARQVQNQAPPPGGFRIIGNIYWVGGEYGSY
Ga0126308_1073973323300010040Serpentine SoilMRQVSALMLGAAIGMMSPLGAAERAEPIQAQNQAPPPGGFRIIGNIFWVGGEYGSYLI
Ga0134128_1170087813300010373Terrestrial SoilMRQISALMLLGAAIGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIIGSAASMARI*
Ga0137312_103738723300011400SoilMTQIRALMWLGVAIAIVALLGAAGRVEPIEAQGQAPPPEGFR
Ga0137436_101416513300011423SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWV
Ga0137464_115311423300011434SoilMRQISALMLLGAAIGIVAPLGAAGRVEPIQAQNQARP
Ga0120191_1002890833300012022TerrestrialMRQISALMLLGAAIGIMAPLGAAGRVEPVQAQNQASPPEAFRIIGNIYWVGGEYGSFLVTTPPGATPH
Ga0137430_119080813300012041SoilMRQISALMLLGTAIGVMAPLGAAGRVEPLQAQNQAPPPEGFRI
Ga0150985_12273336113300012212Avena Fatua RhizosphereMRQIRALMLLGAAIGIMAPPVASGRVEPTQARDEAPPPEGFR
Ga0157323_105040323300012495Arabidopsis RhizosphereMRQISALMLFGAAIGIMASLGAAGLVEPLQAQNQAPPPEGFRIIG
Ga0157300_112242713300012884SoilMRQISALMLLGAAIGIVAPLGVPGSVEPVHAQNQTPPP
Ga0157298_1001440013300012913SoilMPQVRALMCLGVAIVIVAALGAAGRVEPIQAQEQAPPPEGFRII
Ga0157378_1332036113300013297Miscanthus RhizosphereMRQISALMLLGAAIWNMAPLGAAGRVEPIQAQNQERPPEGFRIIGNIYWVGGEYGSY
Ga0157380_1061609313300014326Switchgrass RhizosphereMRQISALMLLGAAIGIMAPLGAAGRVEPFQAQNQPPPPEGFRII
Ga0157380_1203126123300014326Switchgrass RhizosphereMRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIGN
Ga0157377_1032810023300014745Miscanthus RhizosphereMRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAAPPEGFR
Ga0180088_101054113300014868SoilMRQISALMLLGAAIGIVAPLGAAGRAEPSQAQNQAPPPEGFRIIGN
Ga0180067_103060813300015257SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEG
Ga0163161_1118736113300017792Switchgrass RhizosphereMRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWV
Ga0184609_1054675813300018076Groundwater SedimentMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQALPPEGFR
Ga0190265_1048231523300018422SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGFRIIGSIYWVGGEYG
Ga0190270_1016063613300018469SoilMRQISVLMLLGAAIGIVAPLGAAGRVEPSQAQNQAPPPEGFRIIGNIYWVGGEYG
Ga0190270_1033724513300018469SoilMRQVSAWMLGAAIGMMAPLGAAGRAEPLQAQNQAPPPGGFRIIGNIYWVGGE
Ga0190270_1047703223300018469SoilMRRVSALMLGAAIGMMAPLGAAGRAEPLQAQNQAPPPGGSRTNANVYSVPGEYGSYLITTPQGDI
Ga0190270_1055518623300018469SoilMRQIGALMLVGVAIVITAPFGAAEGEEAVPAQNQAPPPEGFRVIGNIYWVGGER
Ga0190271_1016897923300018481SoilMRQIGALMLLGVAIVITAPFGAAEGEEAVPAQNQAPPPEGFRVIGNIYWVGGER
Ga0190271_1095876623300018481SoilMRQISALILLGAAIGITAPLDAAGRVEPVQAQNQAPPPEGFRIIGNIYWV
Ga0190271_1294341823300018481SoilMRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAPPPEGFRI
Ga0190271_1380642013300018481SoilMRQLSALMLVGAAIVFMVPLGAGGNVEAIQAQNQAPPQG
Ga0173481_1033208023300019356SoilMRQVSALMLGAAIGMMAPLGAGGRAEPIQAPKQAPAPGGFRIIGN
Ga0173479_1080282223300019362SoilMRQISALMLLGAAIGITAPLDAAGRVEPIQAQNQAD
Ga0190264_1227306113300019377SoilMRQISALMLLGAAIGIMGPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGESGSYLITTP
Ga0247746_105198233300022886SoilMRQLSRLMLVSAAIVFMVPLGASGRVETIQAQSQAPPPQGFRIIGNIYWVGGEYGSYLITTPQGHILH
Ga0207673_106971623300025290Corn, Switchgrass And Miscanthus RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207682_1000246153300025893Miscanthus RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEAVQAQNQAPPPEGFRIIGNIYWVGGEY
Ga0207680_1014900923300025903Switchgrass RhizosphereMRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207643_1026864523300025908Miscanthus RhizosphereMRQISALILLGAAIGMTTPLGAAGFLDPVQAQNQAPPPEGFRIIGNIYWVG
Ga0207701_1018486143300025930Corn, Switchgrass And Miscanthus RhizosphereMRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGG
Ga0207701_1029229113300025930Corn, Switchgrass And Miscanthus RhizosphereMRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGG
Ga0207701_1073037813300025930Corn, Switchgrass And Miscanthus RhizosphereMRQISAVMLGAAIGMMAPLGAAGRAEPVQAGNQAPPPEGFR
Ga0207690_1120770413300025932Corn RhizosphereMRQISALMLLGAALGMMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSYLI
Ga0207670_1000209713300025936Switchgrass RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVGGEYGSYLITTPQG
Ga0207670_1067156423300025936Switchgrass RhizosphereMRRVSALMLGAAIGVMAPLGPAGRAEPVQAQNQAPPPEGFRIIGNIYWVGGEYGS
Ga0207691_1069323123300025940Miscanthus RhizosphereMRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRII
Ga0207668_1065752823300025972Switchgrass RhizosphereMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQHQTPPPEAFRIIGNIYWVG
Ga0207639_1067468523300026041Corn RhizosphereMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFRIIGNIYWVG
Ga0207708_1132334823300026075Corn, Switchgrass And Miscanthus RhizosphereMGRRISALMLVGAAIGMMALLGAAGRVDPMQAQNAPPPEGFRIIGNIYWV
Ga0207648_1030676033300026089Miscanthus RhizosphereMRQIRALILLGAAVGMVATLGAVGRLEPVQARNEAPPPEGFRIIANIYWV
Ga0207675_10053376713300026118Switchgrass RhizosphereMRQISALMLLGAAIGTMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0208685_111161413300027513SoilMRQISALMLLGAAIGIMEPLGAAGRVEPIQAQNQA
Ga0207428_1011872213300027907Populus RhizosphereMRQISALMVLGAAIGITAPLGAAGRVEPIQGQNQAPPPEGFRIIGNIY
Ga0209382_1129539613300027909Populus RhizosphereMRQVSALMLGAAIGMIAPLGAAGRAEPIQAQNQAPPPGGFRIIGNIYWVGG
Ga0268265_1204220513300028380Switchgrass RhizosphereMRQLSRLMLLGAAIGIVGPLGAAGRVEPIQAQNQARPPE
Ga0268265_1240725913300028380Switchgrass RhizosphereMRQISALILLGAAIGMTTPLGAAGFLEPVQAQNQAPPEGFRIIGNIYWVGGEYGSYLITTPQGH
Ga0307500_1015022213300031198SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQARPPEGFRIIGNIYWVGGEYGSYLITTPQG
Ga0310888_1063087613300031538SoilMRQFSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNI
Ga0310887_1097758013300031547SoilMRQISALLLVGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGF
Ga0310886_1002711613300031562SoilMRQISALMLLGAALGIMAPLGAAGRVEPVQAQNQAPPPEGFR
Ga0307468_10115368313300031740Hardwood Forest SoilMRQISALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0307413_1207026113300031824RhizosphereMRQISALMLLGGAIGILASLGAAARGEPVQAQNQAPPPQGFRIIGNIYWVGGEYG
Ga0310904_1138569413300031854SoilMGQIRALMLLGAAIGIMAPLGAAGRVEPIQAQNRAAPPAGFP
Ga0310900_1048736423300031908SoilMRRISALMLLVAAIGTLAPLGAASLQAQNQARPPEGFRIIGNIYWV
Ga0307412_1160928113300031911RhizosphereMPQIRALMWLGVAMAIVAASGRGNPVHAQNQVPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0310903_1014284423300032000SoilMRQISALLLVGAAIGIMAPLGASGRVEPIQAQNQA
Ga0307411_1106091813300032005RhizosphereMRQVSALMLGAAIGMMSPLGAAGRAEPMQAQNQAPPPGGFRIIGNIYWVGGEYGSYLITTPQ
Ga0310902_1088487313300032012SoilMRQISALLVGAAIGIMVPLGAAGRVEPIQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0310906_1099089413300032013SoilMRRISALMLLVAAIGTLAPLGAASLQAQNQARPPEGFRIIGNIYWVGGEYGSYLIT
Ga0310899_1056358423300032017SoilMRQVSALMLLGAAIGIMAPLGAAGRVEPIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLI
Ga0310899_1065885013300032017SoilMRQFSALMLLGAAIGIMAPLGAAGRVEPIQAQNEAPPPQGFRIIGNIYWVGGEYGSYLITTPQGHI
Ga0310890_1090613913300032075SoilMRQISALMLLGVAIGIMAPLGAAGRVEAVQAQNQAPPPEGFRIIGNIYWVGG
Ga0310895_1024633323300032122SoilMGQIRALMLLGAAIGIMAPLGAAGRVEPIQAQNRAAPPAGFRIIGNIYWVGGEYGSY
Ga0315912_1072716413300032157SoilMRQISALMLFLTAIGSVAPLGAAERVEAIQAQNQAPPPPEGFRIIGNIYWVGGEYGSYLITTPQ
Ga0247830_1067952913300033551SoilMRQISALMLLGAAIGITAPLDAAGRVEPMQAQNQAPPPEGFRIIGNIYWVGGEYGSYLIT
Ga0364923_0227958_373_5043300034690SedimentMPQIGALMRLGVAIAIVALLGAAGRVEPIQAQGQAPPPEGFRII


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.