NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F069781

Metagenome Family F069781

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069781
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 119 residues
Representative Sequence AVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGIETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Number of Associated Samples 109
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 76.42 %
% of genes from short scaffolds (< 2000 bps) 78.86 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.488 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.455 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.398 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186
1E4A_04103060
24ZMR_03648440
3JGI11643J11755_117734131
4Ga0062386_1013260662
5Ga0066396_100092571
6Ga0066680_107931342
7Ga0066388_1062842841
8Ga0070710_102219332
9Ga0070708_1008803982
10Ga0066692_110030111
11Ga0066708_103141702
12Ga0066691_103812421
13Ga0066654_105350651
14Ga0066905_1009994131
15Ga0068861_1022996741
16Ga0066903_1070715032
17Ga0075365_107131141
18Ga0075425_1011255641
19Ga0075434_1022329881
20Ga0075434_1024492841
21Ga0099795_100966691
22Ga0099795_101338422
23Ga0099828_119424842
24Ga0111539_124386551
25Ga0075418_113615242
26Ga0099792_106553331
27Ga0114129_107989891
28Ga0114129_120690811
29Ga0114129_126088971
30Ga0111538_108616821
31Ga0111538_109001131
32Ga0105249_131996851
33Ga0126372_101565011
34Ga0126381_1009023141
35Ga0126381_1037240871
36Ga0137383_107334862
37Ga0137383_109204641
38Ga0137374_107863642
39Ga0137362_101194315
40Ga0137376_101605441
41Ga0137378_113601701
42Ga0137387_106780352
43Ga0137384_114482171
44Ga0137361_118469641
45Ga0137390_119569441
46Ga0157333_10151312
47Ga0157341_10458821
48Ga0137358_111022721
49Ga0137407_109270241
50Ga0164303_109303552
51Ga0164301_115445811
52Ga0164302_100565973
53Ga0164304_110761011
54Ga0157378_128567961
55Ga0137412_107857221
56Ga0137403_107836892
57Ga0132257_1005042581
58Ga0132255_1013392681
59Ga0182033_102115105
60Ga0182034_101674703
61Ga0182034_110729321
62Ga0182037_100305891
63Ga0182038_106392982
64Ga0184619_104064511
65Ga0184618_104128952
66Ga0187774_114719031
67Ga0066662_112769951
68Ga0193733_11532002
69Ga0210399_112573991
70Ga0210381_100441843
71Ga0210406_107437351
72Ga0210392_111982321
73Ga0207692_101127701
74Ga0257178_10275132
75Ga0257169_10685652
76Ga0257168_10199121
77Ga0207946_1045472
78Ga0209180_100581734
79Ga0209701_102277111
80Ga0209590_107511041
81Ga0207428_111813831
82Ga0209382_114781512
83Ga0247828_109270891
84Ga0307316_100138131
85Ga0307280_102834092
86Ga0307323_100455432
87Ga0307287_103677631
88Ga0318534_104717291
89Ga0318515_103108112
90Ga0318515_105305532
91Ga0318560_101157681
92Ga0318560_103436202
93Ga0306917_112110601
94Ga0318501_103871221
95Ga0318501_105534692
96Ga0306918_108131492
97Ga0306918_110980582
98Ga0318535_102938953
99Ga0318521_105606032
100Ga0318547_101979422
101Ga0318557_106038861
102Ga0318550_103383682
103Ga0318497_105423081
104Ga0310917_101251491
105Ga0306925_116852362
106Ga0318551_108052491
107Ga0306921_107914224
108Ga0310910_112151341
109Ga0310909_108010381
110Ga0306926_115143912
111Ga0318530_103525921
112Ga0306922_106729603
113Ga0318563_106951972
114Ga0310911_101303444
115Ga0318549_104678112
116Ga0318532_100678652
117Ga0318532_101858131
118Ga0318504_104646151
119Ga0318510_102733732
120Ga0318553_102142012
121Ga0318553_104846092
122Ga0318518_104761452
123Ga0318540_101822472
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 42.47%    Coil/Unstructured: 57.53%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110AVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGIETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNSSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
80.5%19.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Bog Forest Soil
Groundwater Sediment
Soil
Vadose Zone Soil
Tropical Forest Soil
Soil
Grasslands Soil
Grass Soil
Soil
Soil
Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass, Maize And Mischanthus Litter
8.1%17.1%4.9%28.5%9.8%3.3%9.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_041030602170459003Grass SoilSVQLSPSASKRMLQGEFRFPLFSATPNVSVQIISSTAAAPMQVTALKIAEIAGMSGAIETQIVVEAETIFDVPASGIFYANVVVTGVPVSPPPSAS
4ZMR_036484402170459017Switchgrass, Maize And Mischanthus LitterFDPSPAPFNAFTYCASVLLTLSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGDTETQIVVEAETIFDVSPGGLYYANLVVTGVPVVPPQNRPRQTLD
JGI11643J11755_1177341313300000787SoilNAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIXGAPMQVHXLKIQEXXGXSGGXETQIAVEAETIXDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0062386_10132606623300004152Bog Forest SoilFNAYTYCASVQLRPSASKRVLLGEFSFPAFSATPSVSVQIISSISAVPMQVKALKIVEIRGNIDPIETHITVEAEPIFDGTASGFYFANLVVTGVPLVPPGKSDSAKLLP*
Ga0066396_1000925713300004267Tropical Forest SoilYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDVTQLLH*
Ga0066680_1079313423300005174SoilAFTYCASVPLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSIGAVPMQVRALKIEEILGISGPVETQIVVEAETIFDVPAGGIYYANLVVTGIPLVPPTKANSAELLH*
Ga0066388_10628428413300005332Tropical Forest SoilNPAPFDAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIGGAPMQVHALKIQEVPGISGHAETQIVVEAVTIFDVSPSGLYYANLVVTGVPVVPPPRQSPSDLSSAPVGKLL*
Ga0070710_1022193323300005437Corn, Switchgrass And Miscanthus RhizosphereCASVPLGPSISKRNLRGEFRFPVFSATPNVSVQIISSTASAPMQIYALKIEEILGNSGAVETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLLP*
Ga0070708_10088039823300005445Corn, Switchgrass And Miscanthus RhizosphereLPRSAFGEASFAPAPEQSVAAAIYFDANPAPFDAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIREIPGNSGTIETQIVVEAVTIFDVSPGGLYYANLVVTGVPVIPPPKQSPPNS*
Ga0066692_1100301113300005555SoilVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTRQAPPNS*
Ga0066708_1031417023300005576SoilISKRVLQGELRFPVFSATPNVSVQIISSTGAAPMQVYALKIEEIPGISGPVETQIVIEAQTIFDVPAGGIYYANLVVTGVPIVPPTKANSAELLH*
Ga0066691_1038124213300005586SoilQHQVSRSVSGDDSFAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0066654_1053506513300005587SoilFKAFTYCASVPLGPSTSKRVLQGEFRFPVFSATPNVSVQIISSIGAVPMQVRALKIEEILGISGPVETQIIVEAETIFDVPAGGIYYANLVVTGVPLVPPTKANSAELLH*
Ga0066905_10099941313300005713Tropical Forest SoilQSMRANAVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0068861_10229967413300005719Switchgrass RhizosphereSVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEEISGISGAVGTQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLPNGPPPFD*
Ga0066903_10707150323300005764Tropical Forest SoilSEPGRHLRMPAVYFDPSPAPLKAYTYSASVQLGPTASSRILQGEFRFPVFSTTPSVSVQIISSISAVPMLVKTLKIAEIPGSNGPVETQIVVEAETIVDIPAGGFYYANVVVTGVPVIPPAASNAAQLMR*
Ga0075365_1071311413300006038Populus EndosphereQITRMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPIIPPTKENSAKLLP*
Ga0075425_10112556413300006854Populus RhizosphereAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEIPEISVGTETQIVVEAQTLFDVSPGGLYYANLVVTGVPVVPPTKPIPPNS*
Ga0075434_10223298813300006871Populus RhizosphereVAPAPAQSARTTATYFDPNPATFKAFTYCASVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEEISGISGAVETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLPNGPPPLD*
Ga0075434_10244928413300006871Populus RhizosphereNAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEIPEISVGTETQIVVEAQTLFDVSPGGLYYANLVVTGVPVVPPTKPIPPNS*
Ga0099795_1009666913300007788Vadose Zone SoilDSFPPAPGQSTRANAIYFDPSPAPFNAFTYCASVLLTPSSSKRVVLGEFRFPAFRATPNVSVQIISSIGGAPMQVHALKIQEVPGISGGTQTQIVVEAQTLFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0099795_1013384223300007788Vadose Zone SoilMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEELFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0099828_1194248423300009089Vadose Zone SoilTYCASVQLGPSASKRVLQGEFRFPVFSATPSVSVQIISSISAVPLQVKTLKMVEISGVSGPVETQIVVEAETIVDVPAGGFYYANLVLTGVPVNPPTKSDSARLLR*
Ga0111539_1243865513300009094Populus RhizosphereLAPGQITRMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALGIEEISGISGAVETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0075418_1136152423300009100Populus RhizosphereYFDPSQAPFNAFTYCASVLLTPSTSRRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIQEVPGISGGTQTQILVEAETIFDVSPGGLYYANLVVSGVPVVPPTKPIAPSS*
Ga0099792_1065533313300009143Vadose Zone SoilMSAEYFNPNPATFKAFTYCASVPLGPSISKRALQGEFRFPAFSATLNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0114129_1079898913300009147Populus RhizosphereMSAEHFNPNPATFNAFTYCASVPLGPSISKRALQGEFRFPAFSATLTVSVQIISSTAQVYALGIEEISGISGAVETQIVVEAETIFDVPANGIYYANLVVTGVPGIPPTNGNSAKLLP
Ga0114129_1206908113300009147Populus RhizosphereHQVSRSVSGDDSFAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0114129_1260889713300009147Populus RhizosphereMTAIYFDPNPATFKAFTYCASVQLGPSTSKRVLQGEFRLPIFSATPNVSVQIISSAAAAPMQVYALRIEEISGISGAVETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPANGNAAKLLP*
Ga0111538_1086168213300009156Populus RhizosphereRMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPIIPPTKENSAKLLP*
Ga0111538_1090011313300009156Populus RhizosphereSASGDDSLAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVLGEFRFPAFRATPNVSVQIISSIGGAPMQVHSLKIQEVPEISGGTETQIVVEAQTLFDVSPGGLYYANLVVTGVPVVPPTKPIPPNS*
Ga0105249_1319968513300009553Switchgrass RhizosphereNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEESFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0126372_1015650113300010360Tropical Forest SoilYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVQNPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH*
Ga0126381_10090231413300010376Tropical Forest SoilMTAAYFDPNPAPFKAFTYCASVPLGPSTSKRVLQGEFRFPVFSATPNVSVQIMSSIGAVPMQVRALKIEEILGISGPVETQIVVEAETIFDVPAGGIYYANLVVTGVPLVPPTKANSAELLH*
Ga0126381_10372408713300010376Tropical Forest SoilAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQEEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGTETQIVVEAETIFDVSPGGLYYANLVVTGMPVVPPTKQVPPNS*
Ga0137383_1073348623300012199Vadose Zone SoilMTAVYFDPNPAPFKAFTYCASVPLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSIGAVPMQVRALKIEEILGISGPIETQIVVEAETIFDVPAGGIYYANLVVTGVPLVPPTKANSAELLH*
Ga0137383_1092046413300012199Vadose Zone SoilPFHAFTYCASVPLGPSISKRVLHGEFRFPVFSATPNVSVQIISSTGAAPMQVYALKIEEITGLSGRVETQIVVEAQTIFDVPAGGIYYANLVVT*
Ga0137374_1078636423300012204Vadose Zone SoilTRASAVYFDPSPAPFHAFTYGASVLLIPSSSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIQEVSGISGGTETQIVVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0137362_1011943153300012205Vadose Zone SoilFAPAPEQSVAAAIYFDPNPAPFDAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIREIPGNSGTIETQIVVEAVTIFDVSPGGLYFANLVVTGVPVVSPPKQSPPNS*
Ga0137376_1016054413300012208Vadose Zone SoilMTAVYFDPNPAPFKAFTYCASVPLGPSTSKRVLQGEFRFPVFSATPNVSVQIISSIGAVPMQVRALKIEEILGISGPVETQIVVEAETIFDVPAGGIYYANLVVTGVPLVPPTKANSAELLH*
Ga0137378_1136017013300012210Vadose Zone SoilLPRSASGDDRFAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0137387_1067803523300012349Vadose Zone SoilQSMAVYFDPNPAPFKAFTYCASVPLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSIGAVPMQVRALKIEEILGISGPVETQIVVEAETIFDVPAGGIYYANLVVTGVPLVPPTKANSAELLH*
Ga0137384_1144821713300012357Vadose Zone SoilSGEDSFAQAPGQGTRANTVYFEPSPAPLNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIVSSIAGAPMQVHALKIQEVPGISGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAWRRSPDMCRYNIIIGAGRGIGREAIH*
Ga0137361_1184696413300012362Vadose Zone SoilAAAIYFDPNPAPFDAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIREIPGISGAIETQIVVEAVTIFDVSPGGLYYANLVVTGVPVASPPKQTESAELLI*
Ga0137390_1195694413300012363Vadose Zone SoilKAYTYCASVQLGPSTSKRVLHGEFRFPVFSTTPSVSVQIISSISAAPMQVSALKIEEISETSGTVETQIVVEAETIFDVPANGIYYANLVVIGVPAIPPTTSNSAQLLH*
Ga0157333_101513123300012484SoilRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPIIPPTKENSAKLLP*
Ga0157341_104588213300012494Arabidopsis RhizosphereVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVHANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0137358_1110227213300012582Vadose Zone SoilAIYFDPSPAPFNAFTYCASVLLTPSSSKRVVLGEFRFPAFRATPNVSVQIISSIGGAPMQVHALKIQEVPGISGGTQTQIVVEAQTLFDVSPGGLYYANVVVTGVPVVPPTKPAPPNS*
Ga0137407_1092702413300012930Vadose Zone SoilPLMSAEYFDPSPAPLKAYTYTASVRLGPSTSKRVLQGEFRFPVFSATPSISVQIISSIGAVPMQVKSLKIAEIPGDSGLLETQIMVEAETIVDFPAGGLYFANLVVTGIPVTPPTVSNAAEELP*
Ga0164303_1093035523300012957SoilAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEVPEISGSTETQVAVEAETIFDVSPGGLYYAHLVVTGVPVVPPTKPIPPNS*
Ga0164301_1154458113300012960SoilMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRVPAFSATPNVSIQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0164302_1005659733300012961SoilMSAEHFNPNPATFNPFTYCASVPLGPSISKRALQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEESFGTSGAAETQIIVEAETIFDVHANGIYYANLVVTGVPVIPPTKENSAKLLP*
Ga0164304_1107610113300012986SoilSVSGDDSFAPAPGQSTRANAVYFDPSPAPFKAFTYCASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS*
Ga0157378_1285679613300013297Miscanthus RhizosphereAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSSSRRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHSLKIQEVPEISGSTETQIVVEAQTLFDVSPGGLYYANVVVTGVPVVPPTKPAPPNS*
Ga0137412_1078572213300015242Vadose Zone SoilFNAFTYCASVQLGPSTSKRGLKGEFRFPAFSATPNVSVQIISSVAATPVQVTALKVADIADNSGAIETQIIVEAETIFDVPANGIFYANVVVIGIPVSPPPTAKAVQLSN*
Ga0137403_1078368923300015264Vadose Zone SoilFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGTSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPLVPPTKANSAELLH*
Ga0132257_10050425813300015373Arabidopsis RhizosphereTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALTIEEISGISGAVETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLLP*
Ga0132255_10133926813300015374Arabidopsis RhizospherePSASRRVLQGEFRFPVFSAPPSVSVQIISSIGAVPMQVKALKIVEIAGSSGPVGTQIVVEAETIVDAPAGGFYYANVVVTGVPIRPLPPSDSAQLVN*
Ga0182033_1021151053300016319SoilFPAFSGTPNVSVQIVSSFGAAPMQVTAVKIEEIAGISGASETQIIVEAQTIFDVPANGIYYANLGVIGVPLTPPKEASSHLFR
Ga0182034_1016747033300016371SoilYFDPSPAPLKAYTYSASVQLGPTASSRILQGEFRFPVFSTTPTVSVQIISSISAVPMLVKTLKIAEIPGSDGPVETQIVVEAETIVDIPASGFYYANVVVTGVPVIPPAASTAAQSMR
Ga0182034_1107293213300016371SoilSPRITATYFDPSPAPFKAYTYSASVRLHPSISKRMWHGELNFPAFSATPIVSVQIISSISAVPMHVKSLKMVENPGPSGPIETQIIIEAEPIFDGAASGFYFANLVVTGVPVIPPTKSNSAKLPN
Ga0182037_1003058913300016404SoilLRMPAVYFDPSPAPLKAYTYTASVRLGPTASNQILQGEFRFPVFSTTPSISVQIISSISAVPMLVKTLKIAEIPGSDGPVGTQIVVEAETIVDIPAGGFYYANIVVTGVPVIPPAASNAAQLMR
Ga0182038_1063929823300016445SoilVQLGPSNSARVLHGEFRFPVFSATPNVSVQIISSFGAAPMQVHAIKIEEIAEISGTSKTRITVEAQTIFDVPANGIYYASLVVVGIPVTPAKDASTRLFR
Ga0184619_1040645113300018061Groundwater SedimentATYFDPNPATFKAFTYCASVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEEISGISGAVGTQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLPNGPPPFD
Ga0184618_1041289523300018071Groundwater SedimentEFRFPVFSATPNVSVQIISSTAAAPMQVYALRIEEILGVSGALETQIVVEAQTIFDVPANGIYYANLVVIGVPIIPPTNRNSAKLLP
Ga0187774_1147190313300018089Tropical PeatlandQSQAAATAKANDTIDAELSGKLRTSTIYFDPSPAPLKAYTYSALVRLGPSASNRVLQGELRFPVFSATPSVSVQILSSISAVPMLVKSLKITEIPGSAGPTGTQIVVEAETIIEAPAAGFYYANVVVTGVPAIPPATSKAAELIH
Ga0066662_1127699513300018468Grasslands SoilISKRVLQGDLRFPVFSATPNVSVQIISSTGAAPMQVYALKIEEITGLSGHVETQIVVEAQTIFDVPAGGIYYANLVVTGVPIVPPTKANSAELLH
Ga0193733_115320023300020022SoilAFTYCASVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEESFGTSGAAETQIVVEAETIFDVHANGIYYANLVVTGVPVIPPTKENSAKLLP
Ga0210399_1125739913300020581SoilSFAPAPGQSTRANAAYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0210381_1004418433300021078Groundwater SedimentTFKAFTYCASVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEEISGISGAVGTQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLPNGPPPFD
Ga0210406_1074373513300021168SoilPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEVPEISVGTETQIVVEAETIFDVSPGGLYYANLVVTGVPVVPPTKPIPPNS
Ga0210392_1119823213300021475SoilSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0207692_1011277013300025898Corn, Switchgrass And Miscanthus RhizosphereANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEIPEISVGTETQIVVEAQTLFDVSPGGLYYANLVVTGVPVVPPTKPIPPNS
Ga0257178_102751323300026446SoilGEASFAPAPEQSVAAAIYFDPNPAPFVAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIREIPGNSGTIETQIVVEAVTIFDVSPGGLYFANLVVTGVPVVSPPKQSPPNS
Ga0257169_106856523300026469SoilFDPNPAPFDAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIGGAPMQVHALKIREIPGNSGTIETQIVVEAVTIFDVSPGGLYYANLVVTGVPVASPPKQSPPNS
Ga0257168_101991213300026514SoilQVSRSASGDDSFAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0207946_10454723300027108Forest SoilRSASGDDSFAPGPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSSSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0209180_1005817343300027846Vadose Zone SoilAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0209701_1022771113300027862Vadose Zone SoilAAPGQSTRANAVYFDPSPAPFNAFTYCASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0209590_1075110413300027882Vadose Zone SoilLPIHGQPGPMVQGPTSAYGRDSVAPAPGQITRMTAEYFVPNPAPFKAYTYCASVQLGPSTSKRVLHGEFRFPVFSATPSVSVQIISSISAAPMQVSALKIEEISETSGTVETQIVVEAETIFDVPVNGIYYANLV
Ga0207428_1118138313300027907Populus RhizosphereSVLLTPSTSKRVVQGEFRFPAFRAMPNVSVQIISSIGGAPMQVHSLKIQEVPEISVGTETQIVVEAHTIFDVSPGGLYYANLVVTGVPVVPPTWPNSSPSDVRTLWPMRPAPGRPHRRSIAWA
Ga0209382_1147815123300027909Populus RhizosphereQSMTAVYFDPNPAPFKAFTYCASVPLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSIGAVPMQVRALKIEEIPGISGPVETQIVVEAETIFDVPAGGIYYANLVVIGVPVIPPTKANSAELLH
Ga0247828_1092708913300028587SoilTSTYGTDSLAPAPGQITRMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEESFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP
Ga0307316_1001381313300028755SoilTYGSDSLAPAPGQITRMSAEYFNPNPATFKAFTYCASVPLGPSISKRVLQGEFRFPAFSATPNVSVQIISSTAAAPMQVYALRIEEIFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP
Ga0307280_1028340923300028768SoilEHFNPNPATFNAFTYCASVPLGPSISKRALQGEFRFPAFSATLNVSVQIISSTAAAPMQVYALRIEESFGTSGAAETQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTKENSAKLLP
Ga0307323_1004554323300028787SoilDSVAPAPAQSARTTATYFDPNPATFKAFTYCASVQLGPSTSKRVLQGEFRFPIFSATPNVSVQIISSTAAAPMQVYALRIEEISGISGAVGTQIVVEAETIFDVPANGIYYANLVVTGVPVIPPTNGNSAKLPNGPPPFD
Ga0307287_1036776313300028796SoilYCASVPLGPSNSKRVLRGEFRFPVFSATPNVSVQIISSTAAAPMQVYALRIEEILGVSGAVETQIVVEAETIFDVPANGIYYANLVVIGVPIIPPANGNSAKLLP
Ga0318534_1047172913300031544SoilSSASGSEGFASAPDQSPRMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVQNPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0318515_1031081123300031572SoilTYTASVRLGPTASNQILQGEFRFPVFSTTPSISVQIISSISAVPMLVKTLKIAEIPGSDGPVGTQIVVEAETIVDIPAGGFYYANIVVTGVPVIPPAASNAAQLMR
Ga0318515_1053055323300031572SoilSFAPAPGQSTRANAVYFDPSPAPFNAFTYSASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALNIQEVPGLSGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318560_1011576813300031682SoilTPDQSPRMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0318560_1034362023300031682SoilLGPTASSRILQGEFRFPVFSTTPSVSVQIISSISAVPMLVKTLKIAEIPGSDGPVGTQIVVEAETIVDIPAGGFYYANIVVTGVPVIPPAASNAAQLMR
Ga0306917_1121106013300031719SoilPSASKRVLQGEFRFPVFSAPPSVSVQIISSIGAVPMQVRALKIVEIAGRSGSVETQIVVEAETIVDAPPGGFYYANVVVTGIPITPPASSGSAQLVH
Ga0318501_1038712213300031736SoilVYSEAKSTPFTAFTYSASVQLTPSTSTRVLQGEFRFPLFSAAPNVSVQIVSSFGAAPMQVHAVKIEEIAGMSGASETQIIVEAQTIFDVPANGIYYANLVVIGVPVPSSKGASTELFR
Ga0318501_1055346923300031736SoilVHGRHLRMPAVYFDPSPAPLKAYTYTASVRLSSTASNRILQGEFRFPVFSTTPSVSVQIISSISAVPMLVKTLKIAEIPGSDGPVETQLVVEAETIVDIPASGFYYANVVVTGVPVIPPAASTAAQSMR
Ga0306918_1081314923300031744SoilSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0306918_1109805823300031744SoilAYFDPSPAPFNAFTYCASVLLAPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318535_1029389533300031764SoilTYSASVRLNPSTSKRVWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0318521_1056060323300031770SoilGDDSFAPAPGQSTRANAVYFDPSPAPFNAFTYSASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318547_1019794223300031781SoilTYTASVRLSSTASNRILQGEFRFPVFSTTPSVSVQIISSISAVPMLVKTLKIAEIPGSDGPVETQLVVEAETIVDIPAGGFYYANIVVTGVPVIPPAASNAAQLMR
Ga0318557_1060388613300031795SoilQSPRMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0318550_1033836823300031797SoilTSTRVLQGEFRFPLFSAAPNVSVQIVSSFGAAPMQVHAVKIEEIAGMSGASETQIIVEAQTIFDVPANGIYYANLVVIGVPVPSSKGASTELFR
Ga0318497_1054230813300031805SoilTRANAVYFDPSPAPFNAFTYSASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0310917_1012514913300031833SoilNAVYFDPSPAPFNAFTYSASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0306925_1168523623300031890SoilSTTHEAVVYFDPSPAPLKAYTYSASVRLAPSASRRVLQGEFRFPVFSVPPSVSVQIISSIGAVPMQVKTLKMVEIAGSSGLVETQIVVEAETIVDAAAGGFYYANVVVTGIPVTPLPPSGSTQLVN
Ga0318551_1080524913300031896SoilDDSFAPAPGQSARANAVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGLSGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0306921_1079142243300031912SoilTSGRVLQGEFRFPAFSGTPNVSVQIVSSFGAAPMQVTAVKIEEIAGISGASETQIIVEAQTIFDVPANGIYYANLGVIGVPLTPPKEASSHLFR
Ga0310910_1121513413300031946SoilFAPAPGQSTRANAVYFDPSPAPFNAFTYCASVLLAPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGTETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0310909_1080103813300031947SoilAVVYFDPSPAPLKAYTYSASVRLAPSASKRVLQGEFRFPVFSAPPSVSVQIISSIGAVPMQVRALKIVEIAGRSGSVETQIVVEAETIVDAPPGGFYYANVVVTGIPITPPASSGSAQLV
Ga0306926_1151439123300031954SoilDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVRIISSIAGAPMQVHALKIQEVPGISGSTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318530_1035259213300031959SoilFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0306922_1067296033300032001SoilSVRLGPTASNRILQGEFRFPIFSTTPSVSVQIISSISAVPVLVKALKIAQIPGSDGPVETQIVVEAETIVDIPAGGFYYANVVVTGLPVIPPAASNAAQLMR
Ga0318563_1069519723300032009SoilMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAP
Ga0310911_1013034443300032035SoilFRFPAFSATPNVSVQIISSFGAAPMQVHAVKIEEIAEISGTSETRITVEAQTIFDVPANGIYYASLVVVGIPVTPAKDASTRLFR
Ga0318549_1046781123300032041SoilANAVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALNIQEVPGLSGGTETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318532_1006786523300032051SoilSGSEGFASAPDQSPRMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH
Ga0318532_1018581313300032051SoilTYSASVQLTPSTSTRVLQGEFRFPLFSAAPNVSVQIVSSFGAAPMQVHAVKIEEIAGMSGASETQIIVEAQTIFDVPANGIYYANLVVIGVPVPSSKGASTELFR
Ga0318504_1046461513300032063SoilTYSASVQLSPSTSGRVLQGEFRFPAFSGTPNVSVQIVSSFGAAPMQVTAVKIEEIAGISGASETQIIVEAQTIFDVPANGIYYANLGVIGVPLTPPKEASSHLFR
Ga0318510_1027337323300032064SoilFTYSASVQLTPSTSTRVLQGEFRFPLFSAAPNVSVQIVSSFGAAPMQVHAVKIEEIAGMSGASETQIIVEAQTIFDVPANGIYYANLVVIGVPVPSSKGASTELFR
Ga0318553_1021420123300032068SoilAVYFDPSPAPFNAFTYSASVLLTPSTSKRVVQGEFRFPAFSATPNVSVQIISSIAGAPMQVHALKIQEVPGISGGIETQIAVEAATIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318553_1048460923300032068SoilFPLFSAAPNVSVQIVSSFGAAPMQVHAVKIEEIAGMSGASETQIIVEAQTIFDVPANGIYYANLVVIGVPVPSSKGASTELFR
Ga0318518_1047614523300032090SoilVYFDPSPPPFNAFTYSASVLLTPSTSKRLVQGEFRFPAFSATPNVSVQIISSIAGAPMHVHALKIQEVPGISGGIETQIAVEAETIFDVSPGGLYYANLVVTGVPVVPPTKQAPPNS
Ga0318540_1018224723300032094SoilSTPDQSPRMTATYFDPSPAPFKAYTYSASVRLNPSTSKRIWHGELSFPAFSATPTVSVQIVSSISAVPMQVKSLKMVENPGPSGPVETQMIVEAEPIFDGTASGVYFANLVVTGVPVAPPTKSDGTQLLH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.