Metagenome Family F069747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069747
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	57 residues
Representative Sequence	TARQYGEVVLPDDSTGQGPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQV
Number of Associated Samples	92
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.65 %
% of genes near scaffold ends (potentially truncated)	69.92 %
% of genes from short scaffolds (< 2000 bps)	73.98 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (68.293 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment (17.886 % of family members)
Environment Ontology (ENVO)	Unclassified (39.837 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.341 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120. 1JGI20214J51088_100094702 2JGI20214J51088_100472443 3JGI20214J51088_100790281 4JGI20214J51088_102451434 5Ga0031653_100454212 6Ga0055471_102960832 7Ga0055461_100741771 8Ga0055465_103476651 9Ga0055484_101362322 10Ga0055495_101812491 11Ga0066602_101650693 12Ga0066602_104102791 13Ga0066603_100994732 14Ga0066603_104413371 15Ga0066600_103332481 16Ga0066601_104639492 17Ga0066599_1010052201 18Ga0075524_102788961 19Ga0105093_108729122 20Ga0105093_109028091 21Ga0105095_100618262 22Ga0105095_100725721 23Ga0105099_100972321 24Ga0105099_105212731 25Ga0105107_109872021 26Ga0102851_103809014 27Ga0105094_100982852 28Ga0105092_103419932 29Ga0105104_100661772 30Ga0115028_103463091 31Ga0116148_10803881 32Ga0116171_102903353 33Ga0116155_100267501 34Ga0116154_100206661 35Ga0116153_103523451 36Ga0116247_104969481 37Ga0114922_117105621 38Ga0137460_10715021 39Ga0153916_103999051 40Ga0172369_102941271 41Ga0172366_100852632 42Ga0172370_100778891 43Ga0172370_103859933 44Ga0172375_104500382 45Ga0184631_100561962 46Ga0226659_100206033 47Ga0209507_10125314 48Ga0209201_12502181 49Ga0208196_10223554 50Ga0210136_10712301 51Ga0209703_10665382 52Ga0209575_101387331 53Ga0209593_101057432 54Ga0209800_100601582 55Ga0209800_100872331 56Ga0209800_101033043 57Ga0209262_104361072 58Ga0209262_104537991 59Ga0209262_106486492 60Ga0209496_102100571 61Ga0209668_104093542 62Ga0265596_11464382 63Ga0302252_10488603 64Ga0311022_104185443 65Ga0246092_10470861 66Ga0134606_100215924 67Ga0311366_100204111 68Ga0315554_11641972 69Ga0307428_10966341 70Ga0307420_10350222 71Ga0307435_10381001 72Ga0307422_10366063 73Ga0307419_100447321 74Ga0307419_101316913 75Ga0307380_100546393 76Ga0307380_101045181 77Ga0307380_103527441 78Ga0315548_10296511 79Ga0315548_10792731 80Ga0315547_10055117 81Ga0315544_11994661 82Ga0307379_106357432 83Ga0307379_112563432 84Ga0307379_114238201 85Ga0307378_111836731 86Ga0307378_112695551 87Ga0315532_10444361 88Ga0315532_10767221 89Ga0315532_12050672 90Ga0315552_10699082 91Ga0315545_11914621 92Ga0315545_12375313 93Ga0315533_10153741 94Ga0315543_10375641 95Ga0315543_10760461 96Ga0315553_101531991 97Ga0315550_10514532 98Ga0315550_13431271 99Ga0315536_10770591 100Ga0315536_12240881 101Ga0315291_102452051 102Ga0315293_100848257 103Ga0315293_101912601 104Ga0315294_100631505 105Ga0315546_11412822 106Ga0315284_101240891 107Ga0315551_100112045 108Ga0315551_103593121 109Ga0315277_110443621 110Ga0315295_101294925 111Ga0315275_102180851 112Ga0315275_102428944 113Ga0315273_103043703 114Ga0335071_111346532 115Ga0316625_1006688021 116Ga0326726_101685182 117Ga0316626_107526043 118Ga0316626_107855191 119Ga0316624_110817902 120Ga0316624_114269801 121Ga0316616_1023718101 122Ga0334965_0389568_193_387 123Ga0326723_0512664_162_356
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120. 1JGI20214J51088_100094702 2JGI20214J51088_100790281 3JGI20214J51088_102451434 4Ga0031653_100454212 5Ga0055471_102960832 6Ga0055465_103476651 7Ga0055484_101362322 8Ga0066602_101650693 9Ga0066602_104102791 10Ga0066600_103332481 11Ga0066601_104639492 12Ga0066599_1010052201 13Ga0075524_102788961 14Ga0105093_108729122 15Ga0105095_100618262 16Ga0105099_105212731 17Ga0102851_103809014 18Ga0105092_103419932 19Ga0105104_100661772 20Ga0116171_102903353 21Ga0116155_100267501 22Ga0114922_117105621 23Ga0137460_10715021 24Ga0172369_102941271 25Ga0172366_100852632 26Ga0226659_100206033 27Ga0209800_100872331 28Ga0209262_104361072 29Ga0311022_104185443 30Ga0246092_10470861 31Ga0134606_100215924 32Ga0311366_100204111 33Ga0307435_10381001 34Ga0307422_10366063 35Ga0315544_11994661 36Ga0307378_112695551 37Ga0315545_12375313 38Ga0315543_10375641 39Ga0315550_13431271 40Ga0315546_11412822 41Ga0315284_101240891 42Ga0315551_100112045 43Ga0335071_111346532 44Ga0326726_101685182 45Ga0326723_0512664_162_356
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 1Ga0315533_10153741 2JGI20214J51088_102451434 3Ga0031653_100454212 4Ga0055461_100741771 5Ga0055465_103476651 6Ga0055484_101362322 7Ga0066603_104413371 8Ga0066599_1010052201 9Ga0105095_100725721 10Ga0105099_105212731 11Ga0102851_103809014 12Ga0105104_100661772 13Ga0115028_103463091 14Ga0116171_102903353 15Ga0116155_100267501 16Ga0116154_100206661 17Ga0116247_104969481 18Ga0137460_10715021 19Ga0153916_103999051 20Ga0172369_102941271 21Ga0172366_100852632 22Ga0172370_100778891 23Ga0226659_100206033 24Ga0209262_104537991 25Ga0209496_102100571 26Ga0209668_104093542 27Ga0302252_10488603 28Ga0311022_104185443 29Ga0246092_10470861 30Ga0134606_100215924 31Ga0311366_100204111 32Ga0307435_10381001 33Ga0307380_101045181 34Ga0307380_103527441 35Ga0307379_112563432 36Ga0315532_10444361 37Ga0315293_101912601 38Ga0315277_110443621 39Ga0335071_111346532 40Ga0316625_1006688021 41Ga0316624_114269801 42Ga0316616_1023718101 43Ga0334965_0389568_193_387
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.68% β-sheet: 0.00% Coil/Unstructured: 57.32%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03417	AAT	3.25
PF05598	DUF772	2.44
PF05973	Gp49	2.44
PF00753	Lactamase_B	1.63
PF09603	Fib_succ_major	1.63
PF02452	PemK_toxin	1.63
PF08308	PEGA	1.63
PF14870	PSII_BNR	1.63
PF00578	AhpC-TSA	1.63
PF17170	DUF5128	1.63

Showing 1 to 10 of 46 entries

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COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	3.25
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	2.44
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	2.44
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.63
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81
COG5042	Purine nucleoside permease	Nucleotide transport and metabolism [F]	0.81
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.81
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.29 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Atribacterota	phylum	All Organisms → cellular organisms → Bacteria → Atribacterota	0.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.44 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	48.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
Unclassified	root	N/A	31.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.44 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	48.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %
Unclassified	root	N/A	31.71 %
unclassified Atribacterota	no rank	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota	0.81 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	48.78 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.81 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.63 %
Unclassified	root	N/A	31.71 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.81 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	16.26 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.44 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.81 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	1.63 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Unclassified	root	N/A	31.71 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.81 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	7.32 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	15.45 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.50 %
Bacteroidetes bacterium HGW-Bacteroidetes-20	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium HGW-Bacteroidetes-20	0.81 %
Candidatus Aminicenantes bacterium RBG_13_59_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_59_9	0.81 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Candidatus Woesebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	1.63 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.44 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.81 %
Marinilabiliales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales	0.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.50 %
Bacteroidetes bacterium HGW-Bacteroidetes-20	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium HGW-Bacteroidetes-20	0.81 %
Candidatus Aminicenantes bacterium RBG_13_59_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_59_9	0.81 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Candidatus Woesebacteria bacterium RBG_13_36_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RBG_13_36_22	1.63 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.81 %
Marivirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Marivirgaceae	0.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.81 %
Prolixibacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Unclassified	root	N/A	31.71 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	13.82 %

Name	Rank	Taxonomy	Distribution
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	13.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.50 %
Bacteroidetes bacterium HGW-Bacteroidetes-20	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium HGW-Bacteroidetes-20	0.81 %
Candidatus Aminicenantes bacterium RBG_13_59_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_59_9	0.81 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Candidatus Woesebacteria bacterium RBG_13_36_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RBG_13_36_22	1.63 %
Draconibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Draconibacterium	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.81 %
Marivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Marivirgaceae → Marivirga	0.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Unclassified	root	N/A	31.71 %

Name	Rank	Taxonomy	Distribution
Algoriphagus boritolerans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus boritolerans	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	13.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.50 %
Bacteroidetes bacterium HGW-Bacteroidetes-20	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium HGW-Bacteroidetes-20	0.81 %
Candidatus Aminicenantes bacterium RBG_13_59_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_59_9	0.81 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.81 %
Candidatus Woesebacteria bacterium RBG_13_36_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RBG_13_36_22	1.63 %
Draconibacterium sediminis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Draconibacterium → Draconibacterium sediminis	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.81 %
Marivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Marivirgaceae → Marivirga	0.81 %
Planctomycetes bacterium RBG_13_44_8b	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_44_8b	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Unclassified	root	N/A	31.71 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300013125\|Ga0172369_10294127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	864	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10085263	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2129	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10077889	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	2467	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10385993	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	775	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10450038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	874	Open in IMG/M
3300003432\|JGI20214J51088_10009470	All Organisms → cellular organisms → Bacteria	6471	Open in IMG/M
3300003432\|JGI20214J51088_10047244	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2990	Open in IMG/M
3300003432\|JGI20214J51088_10079028	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2307	Open in IMG/M
3300003432\|JGI20214J51088_10245143	Not Available	1247	Open in IMG/M
3300003859\|Ga0031653_10045421	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1196	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	9.76%
Environmental	Environmental	90.24%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	73.98%
Bioreactor	Engineered → Bioreactor	1.63%
Terrestrial	Environmental → Terrestrial	16.26%
Wastewater	Engineered → Wastewater	8.13%

Habitat	Taxonomy	Distribution
Anaerobic	Engineered → Bioreactor → Anaerobic	1.63%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	8.13%
Freshwater	Environmental → Aquatic → Freshwater	39.84%
Marine	Environmental → Aquatic → Marine	31.71%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.81%
Peat	Environmental → Terrestrial → Peat	2.44%
Sediment	Environmental → Aquatic → Sediment	1.63%
Soil	Environmental → Terrestrial → Soil	13.82%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	6.50%
Coastal	Environmental → Aquatic → Marine → Coastal	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.76%
Lake	Environmental → Aquatic → Freshwater → Lake	13.01%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.63%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.81%
Pond	Environmental → Aquatic → Freshwater → Pond	11.38%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.38%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	8.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	22.76%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	11.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.76%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.25%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.63%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.81%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.38%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	8.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	0.81%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.81%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	7.32%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	11.38%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.25%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.06%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.88%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	17.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.76%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.25%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.63%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004066	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20214J51088_100094702	3300003432	Wetland	VQSGHQLPPTARQYGEVVLPDDSTGQGPGTLARKLSRGKEGMARVFAVIVQILLSITRVAVQV*
JGI20214J51088_100472443	3300003432	Wetland	RQYGEVVLPDASTGQGPGTLAEKLSRCKEGMARVFAVMVQILLSITRVAVQV*
JGI20214J51088_100790281	3300003432	Wetland	VRNLKVALALHLTARQYGEVVLPDDSTEQSPGTLASKLSRCKEGMARVFAIQVQIILSITRVAVQV*
JGI20214J51088_102451434	3300003432	Wetland	MFFVSCYRVCQLTARQYGEVVLPDASTGQSPGTLASKLSRCKEGEPAPMEWNGIGGVLFAVMIQIWLSAGAIAVQA*
Ga0031653_100454212	3300003859	Freshwater Lake Sediment	MLQLTARQYGEVVLPDASTEQGPGTLAPPAGGSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0055471_102960832	3300003987	Natural And Restored Wetlands	MLTARQYGEVVLPDDSTGQGPGTLAGKLSRCEEGMARVFAVMAQILLH*
Ga0055461_100741771	3300003991	Natural And Restored Wetlands	TARQYGEVVLPDDSTGKGPDTLARKLSRCKEGMARVFAVQVQLLLSITSVAVQV*
Ga0055465_103476651	3300004013	Natural And Restored Wetlands	YSSLCLLTARQYGEVVLPDAASGHDPDTLATKLSRCKEGMARVFAVMVQILLSIMRVAVQV*
Ga0055484_101362322	3300004066	Natural And Restored Wetlands	QYGEVVLPDAASGHDPGTLARRLSRGKEGMAWFLPSWYKFYPSITRVAVQV*
Ga0055495_101812491	3300004146	Natural And Restored Wetlands	LTARQYGEVVLPDAASGHDPDTLARKLSRCKEGMARVFAVMVQILLR*
Ga0066602_101650693	3300004151	Freshwater	LLQLAKSGHKLKLTARQYGEVVLPDASTGQVLTILATKLSRCKEGMARVFAIQVQILLSITRVAVQV*
Ga0066602_104102791	3300004151	Freshwater	VLTARQYGEVVLLDAASGLGPDTLAAKLSRCKEGMARVFAVMVQI*
Ga0066603_100994732	3300004154	Freshwater	LTARQYGEVVLPDASAGQGPGTLATKLSRCKEGMARVFAVMVQIL*
Ga0066603_104413371	3300004154	Freshwater	LLQLPKSGHKLKLTARQYGEVVLPDASTGQVLTILATKLSRCKEGMARVFAIQVQILLSITRVAVQV*
Ga0066600_103332481	3300004155	Freshwater	TARQYGEVVLPDDSTGQDPGTLDTKLSRCKEGMARVFAV*
Ga0066601_104639492	3300004242	Freshwater	LQSVSELKLTARQYGEVVLPDASAGQGPGTLATKLSRCKEGMARVFAVMVQIL
Ga0066599_1010052201	3300004282	Freshwater	TARQYGEVVLPDASTGQGPSTLAAKLSRCKGGMACVFAVKVQSWLNITRVAVQTFKVTGKLSRYC*
Ga0075524_102788961	3300006950	Arctic Peat Soil	LRITARQYGEVVLPDVASGQGPGTLASKLSLQGGYGALFAVMVQILL
Ga0105093_108729122	3300009037	Freshwater Sediment	MTLKYINLDYSLHITARQYGEVVLPDEASGQSPGTLATKLSRCKEGMARVFAVMVQILLRAAAIAVQA*
Ga0105093_109028091	3300009037	Freshwater Sediment	MLTARQYGEVVLPDESTEQGPGTLADKLSRCKEGMARVFAVIVQIL
Ga0105095_100618262	3300009053	Freshwater Sediment	GEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVQVQILLSITRVAVQV*
Ga0105095_100725721	3300009053	Freshwater Sediment	REVALPDDASGLGPLTLATKLSRCKEGMARVFAVQVQILLSIMRVAVQS*
Ga0105099_100972321	3300009082	Freshwater Sediment	LTARQYGEVVLPDASTGQGPGTLAAKLSRCKEGMARVFAVMVQVLLRAGAIAVQN*
Ga0105099_105212731	3300009082	Freshwater Sediment	MLTARQYGEVVLPDESTEQGPGTLADKLSRCKEGMARVFAVIVQILLSITRVAVQVLSEPRIYPKLQI
Ga0105107_109872021	3300009087	Freshwater Sediment	LTARQYGEVGLPDAASGQGPGTLASKLSRCKEGMARVFAVMIQI*
Ga0102851_103809014	3300009091	Freshwater Wetlands	MLKLSSVWYLTARQYGEVVLPDDSTGQGPDTLARKLSLCKEGMACVFAVRVQILFSITRVAVQ
Ga0105094_100982852	3300009153	Freshwater Sediment	TARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVQVQILLSITRVAVQV*
Ga0105092_103419932	3300009157	Freshwater Sediment	MIILVWLDVCRGLPLTARQYGEVVLPDTASGHDPDTLATKLSRCKEGMARVFAVRVQVLL
Ga0105104_100661772	3300009168	Freshwater Sediment	VLSDAASGQSLDTLARKLSRRAPRERSEQRGCKEGMARVFAVMVQILLRAGAIAVQV*
Ga0115028_103463091	3300009179	Wetland	LTARQYGEVVLPDECTGLNPGTLATKLSRCKEGMARVFAVMVQILLSITRVAVQV*
Ga0116148_10803881	3300009669	Anaerobic Digestor Sludge	LTARQYGEVVLPDEASGQGPGTLAAKLLRCKEGMARVFAVMVQSLLH*
Ga0116171_102903353	3300009692	Anaerobic Digestor Sludge	LPDASTDHDPGTLATNLSRCKEGMARVFAIQVQILLRSGAIAAQA*
Ga0116155_100267501	3300009771	Anaerobic Digestor Sludge	MCTALNLTARQYGEVVLPDEASGQCPGTLGINLSRCKEGMARVFAVQVQILLRTGAIAVQV*
Ga0116154_100206661	3300009776	Anaerobic Digestor Sludge	VLCSKLLLVTARQYGEVVLPDEASGQGPGTLGTNLSRFEEGMARVFAVQVQILLHAGAIQVQV*
Ga0116153_103523451	3300009838	Anaerobic Digestor Sludge	VQEIFVLTARQYGEVVLPDDSTGQYPGTLARKLSRCKEGMARVFAVMLQILLSITRVAVQV*
Ga0116247_104969481	3300010352	Anaerobic Digestor Sludge	TEFRLSITARQYGEVVLPDAASGQSPGTLGINLSRCKEGMARVFAIQVQILLRSGAIAAQA*
Ga0114922_117105621	3300011118	Deep Subsurface	MDRFLDTLTARQYGEVVLPDACTGQGPGTLARKLSRCKEGMARVFAVQLQILLSITSVAVQV*SEP
Ga0137460_10715021	3300011408	Soil	LVPFLLTARQYGEVVLPDDGTGQSPGSLATKLSRCKEGMARVFAVMLQILLSITRV
Ga0153916_103999051	3300012964	Freshwater Wetlands	CKLTARQYGEVVLPDASTGQSPDTLARKLSRCKEGMARVFAVMVQFILSITSVAVQV*
(restricted) Ga0172369_102941271	3300013125	Freshwater	ARPIFFAAFVLTARQYGEVVLPDAASGHRPGALARKLSRCKEGMARVFAVMVQILLRAGAVAVEA*
(restricted) Ga0172366_100852632	3300013128	Sediment	MLIFNGLPITVRQYGEVVLPDEASGQGPGTLAEKLSRCKEGMARVFAVRVQVLLSIMRVAVQV*
(restricted) Ga0172370_100778891	3300013136	Freshwater	AFLLTARQYGEVVLPDAASGQSPGTLAAKLSRCKEGMARVFAIMVQILLRDGAVAVQT*
(restricted) Ga0172370_103859933	3300013136	Freshwater	YGEVVLPDASTGQGPGTLARKLSRCKEGMARVFAVMVQILLQAGAVAVQV*
(restricted) Ga0172375_104500382	3300013137	Freshwater	YGEVVLPDAASGHRPGALARKLSRCKEGMARVFAVMVQILLRAGAVAVEA*
Ga0184631_100561962	3300018070	Groundwater Sediment	FVPHRALPLTARQYGEVVLPDDSTEQGPGTLVRKLSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0226659_100206033	3300021603	Granular Sludge	VALAITARQYGEVVLHDEASGQDPGTLAAKLSRCKEGMAHVFAVQVQIWFNITRVAVQV
Ga0209507_10125314	3300025706	Anaerobic Digestor Sludge	MCTALNLTARQYGEVVLPDEASGQCPGTLGINLSRCKEGMARVFAVQVQILLRTGAIAVQ
Ga0209201_12502181	3300025708	Anaerobic Digestor Sludge	LRLTARQYGEVVLPDEASGQGPGTLAAKLLRCKEGMARVFAVMVQSLLH
Ga0208196_10223554	3300025724	Anaerobic Digestor Sludge	FTITARQYGEVVLPDASTGQSPGTLARKLSRCKEGMARVFAVMVQFLLRAGAIAVQF
Ga0210136_10712301	3300025967	Natural And Restored Wetlands	VVLPDASTGQGPGTLAEKLSRCKEGMARVFAVMVQILLSITRVAVQV
Ga0209703_10665382	3300027723	Freshwater Sediment	YGEVVLPDASTGQGPGTLARKLSRCKEGMARVFAVRVQIVLSITSVAVQG
Ga0209575_101387331	3300027739	Freshwater	VLTARQYGEVVLPDEASGQSPGTLASKLSRCKEGMARVFAVMVQILLSITRVAVQV
Ga0209593_101057432	3300027743	Freshwater Sediment	VLSDAASGQSLDTLARKLSRRAPRERSEQRGCKEGMARVFAVMVQILLRAGAIAVQV
Ga0209800_100601582	3300027800	Freshwater	ARQYGEVVLPDAASGQGPDTLASKLSRCKEGMARVFAVRVQVLLSITRVAVQV
Ga0209800_100872331	3300027800	Freshwater	MHNTKFLIRSEPINSHIALLLTARQYGEVVLPDDSTEQSPGTLAGKLSRCKEGMARVFAIWVQILMSITRVAP
Ga0209800_101033043	3300027800	Freshwater	ITARQYGEVVLPDASAGQGPGTLATKLSRCKEGMARVFAVMVQIL
Ga0209262_104361072	3300027841	Freshwater	VLNFEELCNLTARQYGEVVLPDVSTGQDPGTLAIKLSRCKEGMARVFAVRV
Ga0209262_104537991	3300027841	Freshwater	NSHIALLLTARQYGEVVLPDDSTEQSPGTLAGKLSRCKEGMARVFAIWVQILMSITRVAVQV
Ga0209262_106486492	3300027841	Freshwater	MLTARQYGEVVLPDDSTGQSPGTLAAKLSRCKEGMARVFGVMVQILLRAGAIAVQV
Ga0209496_102100571	3300027890	Wetland	MLNFNHRLRLTARQYGEVVLPDAATGQVLLTLARKLSRCKEGMARVFAVMVQILLSITRVAVQV
Ga0209668_104093542	3300027899	Freshwater Lake Sediment	HLTARQYGEVVLPDAVSGQSPDTLAAKLSRCKDGMARVFAVMVQILLRAGAIAVQF
Ga0265596_11464382	3300028161	Saline Water	TARQYGEVVLPDAASGQSPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQF
Ga0302252_10488603	3300028907	Activated Sludge	VIFVLTARQYGEVVLPDESTEPSPGTLAGKLSRCKEGMARVFAVMVQILLRTGAIAVQV
Ga0311022_104185443	3300029799	Anaerobic Digester Digestate	ARQYGEVVLPDEASGQGPGTLATRLSRCEESMACVFAVRVQGLPSFTRVAVQS
Ga0246092_10470861	3300029821	Groundwater	MNKQGRFLDSLTARQYGEVVLPDVSTGKSPGTLAGKLSRCKEGMARVFAVMVQILLRAGALALQV
Ga0134606_100215924	3300029827	Marine Sediment	MRWWLLPDEASGQSPDTLAGKLSRCKEGMARVFAVMVQFLLRAGAIAVQV
Ga0311366_100204111	3300030943	Fen	VLLDAASGLGLDTLAGTLSRCKESMARVFAVMVQILLGAGVVAVQV
Ga0315554_11641972	3300031255	Salt Marsh Sediment	RLPITARQYGEVVLPDASTGQGPDTLARKLSRCKEGMARVFAVMVQILMSITRVAVQV
Ga0307428_10966341	3300031280	Salt Marsh	ALPLTARQYGEVVLPDDSTGQGPGTLARKLSRCKEGMARVFAVMVQILLR
Ga0307420_10350222	3300031281	Salt Marsh	ECNITARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQSF
Ga0307435_10381001	3300031357	Salt Marsh	FRWGKCPLTARQYGEVVLPDAASGQGLGALARKLSRCKEGMARVFALMVQILLRAGAIAVQGL
Ga0307422_10366063	3300031369	Salt Marsh	WFNNLQLTARQYGEVVLPDDSTGQGPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQ
Ga0307419_100447321	3300031537	Salt Marsh	TARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQSF
Ga0307419_101316913	3300031537	Salt Marsh	ITARQYGEVVLPDEASGQSPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQGF
Ga0307380_100546393	3300031539	Soil	MSRLHRLYKLTARQYGEVVLPDAASGQGPGTLAGKLSRCKEGMARVFAVTVQILLRTGAIAVQV
Ga0307380_101045181	3300031539	Soil	REVALPDASTGQSPGTLAGKLSRCKEGMARVFAVQVQSLLSITSVAVQI
Ga0307380_103527441	3300031539	Soil	VLPDTASGQSPGTLARKLSRCKEGMARVFAIKVQDFVSTTRVAVQA
Ga0315548_10296511	3300031551	Salt Marsh Sediment	LTARQYGEVVLPDAASGQGLGALARKLSRCKEGMARVFALMVQILLRAGAIAVQGL
Ga0315548_10792731	3300031551	Salt Marsh Sediment	LPDAASGHGPGTLARKLSRCKEGMARVFAVMVQILLSITRVAVQG
Ga0315547_10055117	3300031553	Salt Marsh Sediment	MSHWHLTARQYGEVVLPDEASGQSPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0315544_11994661	3300031554	Salt Marsh Sediment	MALSSFDTHDTLNLTARQYGEVVLPDASTGQRPGTLARKLSRCKEGMARVFAVMVQILLCAGAIAVQGF
Ga0307379_106357432	3300031565	Soil	MNKQKRFLDSLTARQYGEVVLPDASTGQVPGTLAGKLSRCKEGMARVFAVMVHILL
Ga0307379_112563432	3300031565	Soil	MVGSFSQLTITARQYGEVVLPDEASGQGPGTLAERLSRCKEGMARVFAVQVQILLSITRV
Ga0307379_114238201	3300031565	Soil	VYTALLCPLTARQYGEVVLPDASTGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0307378_111836731	3300031566	Soil	ALPTTARQYGEVVLPDDSTGQSPGTLARKLSRCKEGMARVFAVMVQIILSITSVAVQG
Ga0307378_112695551	3300031566	Soil	YCYLRLLYNFFLVYTALLCPLTARQYGEVVLPDASTGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0315532_10444361	3300031575	Salt Marsh Sediment	QLTARQYGEVVLPDASTGQNPGTLARKLSRCKEGMARVFAVQLQILLSITSVAVQD
Ga0315532_10767221	3300031575	Salt Marsh Sediment	ARQYGEVVLPDEASGQGPGTLAEKLSRCEEGMARVFAVLVQFLLSITRVAVQV
Ga0315532_12050672	3300031575	Salt Marsh Sediment	TASVNWLLTARQYGEVVLPDASTGQGPGTLARKLSRCKEGMARVFAVMVQILLSITRVAVQV
Ga0315552_10699082	3300031620	Salt Marsh Sediment	HARLRLTARQYGEVVLPDEASGQGPGTLAEKLSRCEEGMARVFAVLVQFLLSITRVAVQV
Ga0315545_11914621	3300031624	Salt Marsh Sediment	LGSNPQLTITARQYGEVVLPDEASGQNPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQF
Ga0315545_12375313	3300031624	Salt Marsh Sediment	WKNIRGRSKLQAESKLQLTARQYGEVVLPDDSTGQSPGTLAEKLSRCKEGMARVFAVMVQVLLR
Ga0315533_10153741	3300031643	Salt Marsh Sediment	TARQYGEVVLPDDSTGQGPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQV
Ga0315543_10375641	3300031651	Salt Marsh Sediment	FNFLPDSSSLLSKTLHITARQYGEVVLPDEASGQNPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQF
Ga0315543_10760461	3300031651	Salt Marsh Sediment	TARQYGEVVLPDAASGQGLGALARKLSRCKEGMARVFALMVQILLRAGAIAVQGL
Ga0315553_101531991	3300031652	Salt Marsh Sediment	MLTARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQSF
Ga0315550_10514532	3300031653	Salt Marsh Sediment	FLLTARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQSF
Ga0315550_13431271	3300031653	Salt Marsh Sediment	VLPDAGTGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQCF
Ga0315536_10770591	3300031692	Salt Marsh Sediment	MNKQKRFLDSLTARQYGEVVLPDDSTGQGPGTLAEKLSRCKEGMARVFAVMVQILLR
Ga0315536_12240881	3300031692	Salt Marsh Sediment	ARQYGEVVLPDASTGQGPDTLARKLSRCKEGMARVFAVMVQILMSITRVAVQV
Ga0315291_102452051	3300031707	Sediment	LPVTARQYGEVVLPDAASGQGPGTLASKLSRCKEGMARVFAVMVQILL
Ga0315293_100848257	3300031746	Sediment	VLPDAASGQSPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQG
Ga0315293_101912601	3300031746	Sediment	MFQLPPTARQYGEVVLPDASTGQGPGTLAEKLSRCKEGMARVFDVQVQVLLSITRVAVQV
Ga0315294_100631505	3300031952	Sediment	LTARQYGEVVLPDDSTGQGPGTLASKLSRCKEGMARVFAVRVQVLLSITRVAVQVL
Ga0315546_11412822	3300032029	Salt Marsh Sediment	MTGDSLCHLTARQYGEVVLPDAASGQSPGTLADKLSRCKEGMARVFAIMVQILLRAGAI
Ga0315284_101240891	3300032053	Sediment	LLDPFVLTARQYGEVVLPDASTGLRPGTLAVKLSRCKEGMARVFAVQVQILLSLTSVAVQ
Ga0315551_100112045	3300032062	Salt Marsh Sediment	CVLPDASTGQGPGTLAAKLSRWQDRYGVLFAIRVQILLRAGAIAVQV
Ga0315551_103593121	3300032062	Salt Marsh Sediment	AACLLTARQYGEVVLPDAGTGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAVQCF
Ga0315277_110443621	3300032118	Sediment	NYACYCTITARQYGEVVLPDAASGQGPGTLARKLSRCKEGMARVFAVMVQILLSITSVAVQG
Ga0315295_101294925	3300032156	Sediment	ETIRFLDSLTARQYGEVVLPDAASGQSPGTLARKLSRCKEGMARVFAVMVQILLSAGAIAVQF
Ga0315275_102180851	3300032401	Sediment	PLTARQYGEVVLPDEASGHDPDTLATKLSRCKEGMARVFAVMVQILLRAGAIAVQV
Ga0315275_102428944	3300032401	Sediment	SLTARQYGEVVLPDDSTGQGPGTLASKLSRCKEGMARVFAVRVQVLLSITRVAVQVL
Ga0315273_103043703	3300032516	Sediment	LLITARQYGEVVLPDAASGQGLGTLARKLSRCKEGMARVFAVLEQILLSITRVAVQV
Ga0335071_111346532	3300032897	Soil	MFVGHPALPLTAWQYGEVVLHDAASGNCPGTLATKLSRCKEGMARVFAVMVQFFVSIISAEVET
Ga0316625_1006688021	3300033418	Soil	RLQLTARQDGEVVLPDDSTGQDLGTLASMLSRCKEGMARVFAVRVQILLSITRVAVQV
Ga0326726_101685182	3300033433	Peat Soil	MIFMVFDYSGHAWLLTARQYGEVVLPDAASGQGPGTLARKLSRCKEGMTRVFAVMVQILLRAGAIAVQV
Ga0316626_107526043	3300033485	Soil	GEVVLPDDSTGQGPGTLARKLSRCKEGMARVFAVMVQILLRAGAIAIQI
Ga0316626_107855191	3300033485	Soil	MLKLSSVWYLTARQYGEVVLPDDSTGKGPGTLAIKLSRCKEGMARVFAVMVQILLRAGAIAVQF
Ga0316624_110817902	3300033486	Soil	TARQYGEVVLPDASTGHGPDTLATKLSRCKEGMARVFAVMVQILLSSGAIAVQV
Ga0316624_114269801	3300033486	Soil	MLTARQYGEVVLPGASTGQSPGTLAGKLSRCKEGMARVFAVKVQILLRAGAIAVQV
Ga0316616_1023718101	3300033521	Soil	CLTARQYGEVVLPDAASGQGPGSLATKLSRCKEGMAHFLQVMVQILLSITRVAVQV
Ga0334965_0389568_193_387	3300033991	Sediment	MSLISCALQLTARQYGEVVLPDEASGQGPGTLATKLSRCKEGMARVFAVMVQILLRSGAIAVQV
Ga0326723_0512664_162_356	3300034090	Peat Soil	MYVPKLGLPLTARQYGEVVLPDASAGQSPGTLARKLSRCKEGMARVFAVMVQILLRVGAIAVQV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters