NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F069503

Metagenome Family F069503

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069503
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 99 residues
Representative Sequence MDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNMGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGAGHER
Number of Associated Samples 88
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.29 %
% of genes near scaffold ends (potentially truncated) 26.61 %
% of genes from short scaffolds (< 2000 bps) 79.03 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen
(18.548 % of family members)
Environment Ontology (ENVO) Unclassified
(34.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.129 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134
1beta3_all_01036380
2B_all_v_02638090
3WSSedL1CaDRAFT_100699532
4JGIcombinedJ13530_1022270382
5JGIcombinedJ13530_1030300572
6YBMDRAFT_102393612
7JGI20214J51088_100276874
8JGI20214J51088_100353412
9JGI20214J51088_101750012
10JGI20214J51088_104458001
11Ga0055462_100140603
12Ga0055520_100896032
13Ga0069004_101625572
14Ga0074471_109417792
15Ga0074470_108837532
16Ga0075281_10567471
17Ga0075272_10174472
18Ga0105105_101012332
19Ga0105093_105287172
20Ga0115028_111610672
21Ga0116114_11184862
22Ga0116158_102080062
23Ga0181527_11049262
24Ga0075359_10019352
25Ga0075317_10184533
26Ga0075317_11564671
27Ga0182010_100248563
28Ga0182010_100522652
29Ga0182010_102833891
30Ga0182010_103648052
31Ga0182017_100646562
32Ga0182017_101200002
33Ga0182017_106222061
34Ga0182011_104493191
35Ga0182019_100379161
36Ga0182019_100411202
37Ga0182021_112175523
38Ga0182027_101142502
39Ga0182027_101446773
40Ga0182027_107547181
41Ga0182027_110133982
42Ga0182027_119341682
43Ga0187817_107079552
44Ga0187870_11362042
45Ga0187888_10323892
46Ga0187889_100208224
47Ga0187889_100360463
48Ga0182022_10155333
49Ga0182022_10310184
50Ga0182022_10373432
51Ga0182022_10675811
52Ga0182022_11801763
53Ga0182028_10004392
54Ga0182028_11414124
55Ga0224542_10005874
56Ga0224543_10053932
57Ga0224538_10006341
58Ga0224538_10430562
59Ga0236339_11486722
60Ga0224520_10407222
61Ga0224536_10134321
62Ga0224521_10927092
63Ga0224523_10363642
64Ga0224523_10837491
65Ga0224522_10030127
66Ga0210133_10108611
67Ga0208140_10332682
68Ga0210129_10035632
69Ga0208288_10093752
70Ga0247845_10041762
71Ga0247845_10611232
72Ga0247845_10621041
73Ga0209421_10155362
74Ga0209288_102577651
75Ga0265337_10576352
76Ga0265326_100229402
77Ga0302170_101398982
78Ga0302166_101672612
79Ga0265323_100122142
80Ga0265323_102460752
81Ga0265323_102545342
82Ga0302160_101625751
83Ga0302161_100312982
84Ga0302290_102074972
85Ga0302291_101508201
86Ga0311332_117837062
87Ga0311334_102922852
88Ga0311334_110379571
89Ga0311336_115033162
90Ga0302217_101543331
91Ga0311333_107096002
92Ga0311349_116196021
93Ga0265330_100289481
94Ga0265330_100884852
95Ga0265320_102709762
96Ga0265325_105011682
97Ga0302297_10698642
98Ga0265339_102530661
99Ga0265342_105422491
100Ga0302321_1008937192
101Ga0302321_1023490052
102Ga0302322_1001396012
103Ga0302322_1018857022
104Ga0302322_1037339842
105Ga0335069_110703262
106Ga0335071_100947853
107Ga0335071_118313442
108Ga0316625_1007488091
109Ga0326726_103294832
110Ga0316620_115136732
111Ga0316626_108239222
112Ga0316628_1021523672
113Ga0371488_0039509_2207_2512
114Ga0334822_037996_475_780
115Ga0370486_054082_3_341
116Ga0370507_0022367_614_913
117Ga0370487_0003279_2602_2904
118Ga0370499_0035869_290_589
119Ga0370501_0014396_1487_1792
120Ga0370501_0020699_381_686
121Ga0370501_0131848_146_451
122Ga0370503_0003340_3725_4033
123Ga0370503_0032136_906_1205
124Ga0370481_0104844_1_279
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.58%    β-sheet: 20.16%    Coil/Unstructured: 54.26%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNMGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGAGHERSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
50.0%50.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Wetland
Freshwater
Peatland
Bog
Peatland
Freshwater Sediment
Marine Estuarine
Natural And Restored Wetlands
Wetland
Sediment (Intertidal)
Soil
Soil
Untreated Peat Soil
Natural And Restored Wetlands
Rice Paddy Soil
Fen
Forest Soil
Soil
Fen
Peat Soil
Rhizosphere
Anaerobic Digestor Sludge
3.2%4.0%5.6%5.6%8.1%3.2%18.5%11.3%15.3%8.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
beta3_all_010363802124908028SoilMDQTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
B_all_v_026380902140918024SoilGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
WSSedL1CaDRAFT_1006995323300000318WetlandMDXTPLTMEXRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIISHNTLAAGAGHER*
JGIcombinedJ13530_10222703823300001213WetlandMDPTPLTLKLHPLHHGAYTQITLKGPVATVPQPLEVRRLMSLLWLWHGGPVDVVLCADGTNSGTCWLEVWEDVLGRVPGRLLGMRYLISHNTLAAGADHER*
JGIcombinedJ13530_10303005723300001213WetlandMDATRLTFTLQPLFNGAYTRISLQGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNSGTCWLEIWEDVLGRVPGRHLDVRHLLLRDTPARGAGDER*
YBMDRAFT_1023936123300001373Marine EstuarineMDATRLTFTLRPLYDGAYTQLSLQGPVATAPQHREVRRLMSLLWLWHGRPLDVVLCADGTNTGACWLEIWVDVLGRVPGRHLDIRYLHLRD
JGI20214J51088_1002768743300003432WetlandMDPTPLTLELRPLHRGAYTQIMLKGPVATVPQPLQVRRLLSLLSFWHGGPIDVVLCADGTNPGACWLEVWADVLGRVHRRHLDVRYLISRDTLAAGAGHER*
JGI20214J51088_1003534123300003432WetlandMDPTPLTLELRPLHQGAYTQISLNGPVATMPQVLQVRRLLSMLSFWHGGPITVVLFVDGTNPGACWSEVWTDVLGRVPRRHLDVRYLISRDTLAAGAGHER*
JGI20214J51088_1017500123300003432WetlandMDATPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEXVLXRVPGXRLDMRYLXISHNTLAAGAGHER*
JGI20214J51088_1044580013300003432WetlandMDPTPLTLELRPLHHGAYTQITLKGPVATVPQAWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRHLDVRYLISRDTLAAGAGHER*
Ga0055462_1001406033300004015Natural And Restored WetlandsMDPTPLTLKLRPLHDGAYTEITLSGPIVTAPQAPDVRKLLSVLWLWHGGRIDVALCVDGTNAGACWLDVWDDVLGRVPGRLLRAHYLVTRDTLAQGTGHER*
Ga0055520_1008960323300004150Natural And Restored WetlandsMDPTPLTLELRPLHNGVYTQITLKGPVATVPQVWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRHLDVRYLISRDTLAASAGHER*
Ga0069004_1016255723300005219Natural And Restored WetlandsMDATPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIISHNTLAAGAGHER*
Ga0074471_1094177923300005831Sediment (Intertidal)MDATRLTFTLRPLYDGAYTQLSLQGPVATAPQHREVRRLMSLLWLWHGRPLDVVLCADGTNTGACWLEIWVDVLGRVPGRHLDIRYLHLRDTLAQGAGHER*
Ga0074470_1088375323300005836Sediment (Intertidal)MDPTPLTLKLHPLHHGAYTQITLKGPVATVPQPQEVRRLMSLLWLWHGGPVDVVLCADGTNSGTCWLEVWEDVLGRVPGRLLDMRYLISHNTLAAGAGHER*
Ga0075281_105674713300005897Rice Paddy SoilMDATRLIFTLQPLFDGAYTQLSLQGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNAGACWLEIWEDVLGRVPGRHLDVRYLLVRNTHAQGTGHER*
Ga0075272_101744723300005900Rice Paddy SoilMDATRLTLRLRPLFDGAYTQISLRGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNAGACWLEIWEDVLGRVPGRHLDVRYLLVRDTHAQGTGHER*
Ga0105105_1010123323300009009Freshwater SedimentMDPTPLTLELRPLHHGAYTQITLKGPVATVPQAWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRDLDVRYLISRDTLAAGAGHER*
Ga0105093_1052871723300009037Freshwater SedimentMAPTPLTLKLRPLHDGAYTEIALSGPIVTAPQAPDVRKLLSVLWLWHGGRIDVALCVDGTNAGACWLDVWDDVLGRVPGRLLCAHYLVSRDTLAADAGHER*
Ga0115028_1116106723300009179WetlandMDATRLTLTLRPLFDGAYTQLSLQGPVATVPQRREVRRLMALLWLWHGRPLDVVLCADGTNPGACWMEVWADVLGRVHRRHLDVRYLISRDTLAAGAGHER*
Ga0116114_111848623300009630PeatlandMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSSVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGADHER*
Ga0116158_1020800623300009783Anaerobic Digestor SludgeMDATRLSFTLSPLFDGAYTQIRLQGPVATVPQPREVRRLMALLWLWHGRPLDVVLCADGTNRGTCWLEIWEDVLGRVPGHHLDLRYLRLPNSPAHGARP*
Ga0181527_110492623300014153BogMDPTPLTLELRPLHKGAYTQISLKGPVATVPQVWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEGWADVLGHVHRRHLDIRYLISRDTLAAGAGHER*
Ga0075359_100193523300014266Natural And Restored WetlandsMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIISHNTLAAGAGHER*
Ga0075317_101845333300014309Natural And Restored WetlandsMDATRLRFTLRPLFKGAYTQIRLQGPVATVPQPREVRRLMALLWLWHGRPLDVVLCADVTSTGACWLEIWEDVLGRVPGHHLDMRYLQLPKTLVHGARP*
Ga0075317_115646713300014309Natural And Restored WetlandsMDPTSLTLKLRPLHDGTCTEITLSGPIITTTPRAWDVRKVLSVLWLWHGSRIDVALCVDGTNAGACWLDVWDEILGHVPGRLLRARYLVSRDTLAAGV
Ga0182010_1002485633300014490FenMDPTPLTLELRPLHKGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGSVDVVLYVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIIAHDTLAAGAGHER*
Ga0182010_1005226523300014490FenMDQTPLTLELRPLHRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER*
Ga0182010_1028338913300014490FenMDPTPLTLELRPLHNGAYTQITLKGPVATVPQVLQVRRLLSLLSLWHGGPVDVVLCADGTNPGACWLELWADVLGRVHHRHLDVRYLISRDTLAAGAGHER*
Ga0182010_1036480523300014490FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEGVLGRVPGHHLNLRYLISRNTLAQGAGHER*
Ga0182017_1006465623300014494FenMDQTPLTLELRPLHQGAYSQFTLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER*
Ga0182017_1012000023300014494FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYRISRNTLAQGTGHER*
Ga0182017_1062220613300014494FenMDPTPLTLELRPLHQGAYSQITLRGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTDACWLEVWEDVLGRVPVRHRNLRYLISRNTLAQGAGHER*
Ga0182011_1044931913300014496FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPGHHLNLRYRISRNTLAQGADHER*
Ga0182019_1003791613300014498FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEGVLGRVPGHYLNLRYLISRNTLAQGAGHER*
Ga0182019_1004112023300014498FenMDSTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLYADGTNPGACWLEVWADVLGRVPRRHLGVRYLIPRDTLSAGAGHER*
Ga0182021_1121755233300014502FenMDPTPLTLELRPIHKGAYTQITLKGPVATVPQLWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEIWEDVLGRMPDRHLDIRYLHLRDTLAQGAGHER*
Ga0182027_1011425023300014839FenMDPTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVPRRHLDVRYLISRDTLAAGTGHER*
Ga0182027_1014467733300014839FenMDPTPLTLELHPLHNGAYTQITLKGPVATVPQVLQVRRLLSLLSLWHGGPVDVVLCADGTNPDACWLELWADVLGRVHHRHLDVRYLISRDTLAAGAGHER*
Ga0182027_1075471813300014839FenPWMDPTPLTLELRPLHKGAYTQIALKGPVATVPQALEVRRLMSLLWLWHGGSVDVVLYVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIIAHDTLAAGAGHER*
Ga0182027_1101339823300014839FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGRPVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYRISRNTLAQGTGHER*
Ga0182027_1193416823300014839FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQGLQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPGQHLNLRYLISRNTLAQGKGHER*
Ga0187817_1070795523300017955Freshwater SedimentMDATRLSFTLRPIHGGAYTEISLQGPVATVPQIREVQELLSMLWRWHGRPIDVVLCVDGTNKGACWMEVWADALGHVPERLLEVRFRVLRGPLAMEARP
Ga0187870_113620423300017998PeatlandMDPTPLTLELLPLHKGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGSVDVVLYVDGTNSGACWLEVWQDVLGRVPGHRLDMRYVIIAHDTLAAGAGHER
Ga0187888_103238923300018008PeatlandMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSSVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGADHER
Ga0187889_1002082243300018023PeatlandMDAPRLTFTLQPIYGGAYTEISLQGPVATVPQVREVRQLLSMLWRWQGCPVDVVLCVDGTNKGACWMEIWEDAFGHVPAHLLDVRCRVLRNPLVTEAKP
Ga0187889_1003604633300018023PeatlandMDATRLTLTLRPIHEGAYTEISLQGPVATVPRIREVQELLSMLWRWHGRPVDVVLCVDGTNKGACWMEVWADALGHVPGRLLEVRFRVLRGPLAMEAGRNG
Ga0182022_101553333300019785FenMDPTPLTLELRPLHNGAYTQITLKGPVATVPQVLQVRRLLSLLSLWHGGPVDVVLCADGTNPGACWLELWADVLGRVHHRHLDVRYLISRDTLAAGAGHER
Ga0182022_103101843300019785FenMDQTPLTLELRPLHRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGQER
Ga0182022_103734323300019785FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEGVLGRVPGHHLNLRYLISRNTL
Ga0182022_106758113300019785FenMDQTPLTLELRPLHRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER
Ga0182022_118017633300019785FenMDPTPLTLELWPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPGHHLNLRYLIS
Ga0182028_100043923300019788FenMDPTPLTLELRPLHQGAYSQITLRGPVATVPQALQVRRLMSVLWLWHGSSVDVVLCVDGTNTGACWLEVWEDVLGRIPGHHLNLRYRISRNTLAQGAD
Ga0182028_114141243300019788FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPGHHLNLRYRISRNTLAQGADHER
Ga0224542_100058743300022516SoilMDQTPLTLELRPLHQGAYSQFTLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0224543_100539323300022519SoilMDPTPLTLELRPLHKGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGSVDVVLYVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIIAHDTLAAGAGHER
Ga0224538_100063413300022520SoilMDQTPLTLELRPLHQGDYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER
Ga0224538_104305623300022520SoilMDPTPLTLELRPLHKGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGSVDVVLYVDGTNSGACWLEVWEDVLGRVPGHCLDMRYLIIAHDTLAAGAGHER
Ga0236339_114867223300022650FreshwaterMAQTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0224520_104072223300023075SoilMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0224536_101343213300023226SoilLELRPLHQGAYSQFTLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0224521_109270923300024233SoilMDQTPLTLELRPLHQGAYSQFTLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPGHHLNLRYRISRNTLAQGADHER
Ga0224523_103636423300024238SoilMDPTPLTLELRPLHQGAYSQITLRGPVATVPQALQVRRLMSVLWLWHGSSVDVVLCVDGTNTGACWLEVWEDVLGRIPGHHLNLRYRISRNTLAQGADHER
Ga0224523_108374913300024238SoilLTLELRPLHQGAYSQITLRGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTDACWLEVWEDVLGRVPVRHRNLRYLISRNTLAQGAGHER
Ga0224522_100301273300024240SoilMDPTPLTLKLHPLHHGAYTQIMLKGPVATVPQPQEVRRLMSLLWLWHGGPVDVVLCADGTNSGTCWLEVWEDVLGRVPGRLLEMRYLISHNTLATGADHER
Ga0210133_101086113300025573Natural And Restored WetlandsMDPTPLTLKLRPLHDGAYTEITLSGPIVTAPQAPDVRKLLSVLWLWHGGRIDVALCVDGTNAGACWLDVWDDVLGRVPGRLLRAHYLVTRDTLAQGTGHER
Ga0208140_103326823300026021Rice Paddy SoilMDATRLTLRLRPLFDGAYTQISLRGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNAGACWLEIWEDVLGRVPGRHLDVRYLLVRDTHAQGTGHER
Ga0210129_100356323300026026Natural And Restored WetlandsMDATPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIISHNTLAAGAGHER
Ga0208288_100937523300026039Natural And Restored WetlandsMDATRLRFTLRPLFKGAYTQIRLQGPVATVPQPREVRRLMALLWLWHGRPLDVVLCADVTSTGACWLEIWEDVLGRVPGHHLDMRYLQLPKTLVHGARP
Ga0247845_100417623300026451SoilMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEGVLGRVPGHHLNLRYLISRNTLAQGAGHER
Ga0247845_106112323300026451SoilMDPTPLTLELRPLHQGAYSQITLRGPVATVPQALQVRRLMSVLWLWHGSSVDVVLCVDGTNTGACWLEVWEDVLGRIPGHHLNLRYRISRNTLAQGADHE
Ga0247845_106210413300026451SoilMDPRPLSLELRPLHHGAYSQITLKGPVAKVPRALQVRRLMSVLWLWRGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPSHHLNLRYLISRNTLAQGSPSAQRP
Ga0209421_101553623300027432Forest SoilMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGRPVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYRISRNTLAQGTGHER
Ga0209288_1025776513300027762Freshwater SedimentMDPTPLTLELRPLHHGAYTQITLKGPVATVPQAWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRDLDVRYLISRDTLAAGAGHER
Ga0265337_105763523300028556RhizosphereMDTTPLTMELRSLYRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLYVDGTNSGACWLEVWEDVLGRVPGHRLDVRYLFAHDKLTAGASHER
Ga0265326_1002294023300028558RhizosphereMDPTPLTLKLRPLYQGAYSQITLKGRVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPVHHRNLRYRISRSTLAQGAGHER
Ga0302170_1013989823300028650FenLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0302166_1016726123300028652FenPTPLTLELRPLHNGAYTQITLKGPVATVPQVLQVRRLLSLLSLWHGGPVDVVLCADGTNPGACWLELWADVLGRVHHRHLDVRYLISRDTLAAGAGHER
Ga0265323_1001221423300028653RhizosphereMDTTPLTMELRSLYRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLYVDGTNSGACWLEVWEDVLGRVPGHRLDVRYLFAHDKLTAGAGHER
Ga0265323_1024607523300028653RhizosphereMDPTPLTLELRPLHKGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLIISRDTLAAGAGHER
Ga0265323_1025453423300028653RhizosphereMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPGRHLNLRYLISRNTLTQGAGHER
Ga0302160_1016257513300028665FenMDPRPLSLELRPLHHGAYSQITLKGPVAKVPRALQVRRLMSVLWLWRGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPSHHLNLRYLISRNTLAQGSPSAQRPSSSRGKATSRAVSEHH
Ga0302161_1003129823300028674FenMDQTPLTLELRPLHRGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0302290_1020749723300028777FenRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER
Ga0302291_1015082013300028865FenHRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER
Ga0311332_1178370623300029984FenRPLHHGAYSQITLKGPVATVPQGLQVRRLLSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPVHHLNLRYRISRNTLAQGAGHER
Ga0311334_1029228523300029987FenMDPTPLTLELRPLHHGAYSQITLKGPVATVPQGLQVRRLLSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPVHHLNLRYRISRNTLAQGAGHER
Ga0311334_1103795713300029987FenMDQTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNAGACWLEIWDDLLGRVPVHHRNLRYRISRNTLAQGAGHER
Ga0311336_1150331623300029990FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNMGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGAGHER
Ga0302217_1015433313300030052FenMDPTPLTLELRPLHNGAYTQITLKGPVATVPQVLQVRRLLSLLSLWHGGPVDVVLCADGTNPGACWLELWADVLGRVHHRHLDVRYLISRD
Ga0311333_1070960023300030114FenMDSTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLCADGTNPGTCWLEVWADVLGRVPRRHLDVRYLISRDTLAAGTGHER
Ga0311349_1161960213300030294FenMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNMGACWLEVWEDVLGRVPGHHLNLRYLISRN
Ga0265330_1002894813300031235RhizosphereRPPMDATRLTFTLRPLFDGAYTQLSLQGPVATVPQTREVRRLMSLLWLWHGRPLDVVLCADGTNAGACWLEIWEDVLGRMPDRHLDIRYLHLRDTLAQGAGHER
Ga0265330_1008848523300031235RhizosphereMDPTPLTLDLRPLHHGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGASWLEIWEDVLGRVPGHRLNLRYLISRNTLAQGAGHER
Ga0265320_1027097623300031240RhizosphereMDTTPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLMISHDTLAAGAGHER
Ga0265325_1050116823300031241RhizosphereMDTTPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRL
Ga0302297_106986423300031244FenMDQTPLTLELRPLHRGAYSQITLKGPVATVPQALQVRRLMSILWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPDHHLNLRYRISRNTLAQGTGHER
Ga0265339_1025306613300031249RhizosphereMDTTPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLILSH
Ga0265342_1054224913300031712RhizosphereMDPTPLTLDLRPLHHGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGASWLEIWEDVLGRVPGHRLNLRYLISRNTLAQGAG
Ga0302321_10089371923300031726FenMDSTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVPRRHLGVRYLIPRDTLAAGAGHER
Ga0302321_10234900523300031726FenMDPTPLTLELRPLHHGAYSQITLKGPVATVPQGLQVRRLLSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPVHHL
Ga0302322_10013960123300031902FenMDSRRLTFTLRPLFDGAYTQLLLQGPVATVPQPREVRRLMSLLWLWHGQPLDVVLCADGTNAGACWLEVWEDVLGRVPGRHLDIRYLHLHDTLAQGAGHER
Ga0302322_10188570223300031902FenMDSTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVPRRHLGV
Ga0302322_10373398423300031902FenTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNMGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGAGHER
Ga0335069_1107032623300032893SoilMEPTPLTLKLHPLHHGAYTQITLKGPVATVPQPLEVRRLMSLLWLWHGGPVDVVLCVDGTNSGTCWLEVWEDVLGRVPGRLLGMRYLISHNTLAAGADHER
Ga0335071_1009478533300032897SoilMNAPRLTLTLRPLFDGAYTQLSLQGPVATVPQYREVRQLMSLFWLWHGHPLDVVLCADGTNPGTCWLEIWEDVLGRVPGRHLDVRYLLLRDTPDRGAGHER
Ga0335071_1183134423300032897SoilMDTIRLSFTLRPLFDGAYTQIRLQGPVATVPQPREVRRLMALLWLWHGRPLDVVLCADGTNTGTCWLEIWEDVFGRVPGHHLDLRYLRLSKSPAHGARP
Ga0316625_10074880913300033418SoilMDPTPLTLKLRPLHDGAYTEITLSGPIVTAPQAPDVRKLLSVLWLWHGDRIDVALCADGTNAGACWLDVWDDVLGRVPSRLLRARYLVSRDTLAAGAGHER
Ga0326726_1032948323300033433Peat SoilMDPTRLTLELRPLHNGAYTQIALKGPVATVPQVLQVRRLLSLLSFWHGGPIDVVLCADGTNPGACWLEVWADVLGRVHHRHLEVRYLISRDTLAQGAGHER
Ga0316620_1151367323300033480SoilMDPTPLTLELRPLHHGAYTQITLKGPVATVPQAWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRDLDVRYLISRD
Ga0316626_1082392223300033485SoilDGTYTKIQLQGPVATVPQPREVRRLMALLWLWHGRPLDVVLCADATSTGACWLEIWEDVLGRVPGHHLDLRYRRLSNSPAHGARP
Ga0316628_10215236723300033513SoilMDPTPLTLELRPLHHGAYTQITLKGPVATVPQAWQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVHRRHLDVRYLISRDTLAA
Ga0371488_0039509_2207_25123300033983Peat SoilMDATRLTFTLRPIHGGAYTEISLQGPVATVPRIREVQELLSMLWRWHGRPIDVVLCVDGTNKGACWMEVWADALGHVPERLLEVRFRVLRGPLAMEAGREG
Ga0334822_037996_475_7803300034070SoilMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPGHHLNLRYRISRNTLAQESSHER
Ga0370486_054082_3_3413300034126Untreated Peat SoilLRHLYPRTTRRLPMDATRLSFTLSPLFDGAYTQIRLQGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNTGACWLEIWEEVFGCVPGHHLDLRYLRLSNSSAHGARP
Ga0370507_0022367_614_9133300034158Untreated Peat SoilMDATRLRLTLRPLFGGAYTQIRLQGPVATGPQPQEVRWLMALLWLWHGHPLDVVLCADGTNTGTCWLEIWEDVLGRVPGHHLDLRYLRLPNFPARGARP
Ga0370487_0003279_2602_29043300034170Untreated Peat SoilMNARLTFTLRPIFDGAYTQLSLQGPVATVPQPREVRRLISLLWLWHGRPLDVVLCADGTNAGACWLEIWEDVLGRVPGHHLDIRYLRLRDMSAQGASHER
Ga0370499_0035869_290_5893300034194Untreated Peat SoilMDATRLSFTLSPLFDGAYTQIRLQGPVATVPQSREVRRLMALLWLWHGRPLDVVLCAGATSTGACWLEIWEDVFGCVPGHHLDLSYLRLPNSPAHGARP
Ga0370501_0014396_1487_17923300034195Untreated Peat SoilMDPTPLTLELRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVVLCADGTNPGACWLEVWADVLGRVPRRHLDVRYLISRDTLAAGTGHER
Ga0370501_0020699_381_6863300034195Untreated Peat SoilMDPTPLTLELRPLHQGAYSQITLKGPVATVPQALQVRRLMSVLWLWHGSPVDVVLCVDGTNTGACWLEIWEDVLGRVPVHHLNLRYLISRNTLAQGADHER
Ga0370501_0131848_146_4513300034195Untreated Peat SoilMDPTPLTLELWPLHQGAYSQITLKGPVATVPQALQVRCLMSVLWLWHGSPVDVVLCVDGTNTGACWLEVWEDVLGRVPGHHLNLRYLISRNTLAQGKGHER
Ga0370503_0003340_3725_40333300034196Untreated Peat SoilMDETPLTMELRPLHRGAYTQITLKGPVATVPQALEVRRLMSLLWLWHGGPVDVVLCVDGTNSGACWLEVWEDVLGRVPGHRLDMRYLSISHNTLAAGAGHER
Ga0370503_0032136_906_12053300034196Untreated Peat SoilMDATRLSFTLSPLFDGAYTQIRLQGPVATVPQPREVRRLMSLLWLWHGRPLDVVLCADGTNTGACWLEIWEEVFGCVPGHHLDLRYLRLSNSSAHGARP
Ga0370481_0104844_1_2793300034281Untreated Peat SoilLRPLHKGAYTQITLKGPVVTAPQILQVRRLLSLLSFWHGGPVDVGLCADGTNPGACWLEVWADVLGRVPRRHLDVRYLIPRDTLAAGAGHER


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.