NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F069458

Metagenome Family F069458

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069458
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 77 residues
Representative Sequence MSDYLDLTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDEG
Number of Associated Samples 69
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 33.87 %
% of genes near scaffold ends (potentially truncated) 37.10 %
% of genes from short scaffolds (< 2000 bps) 97.58 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (77.419 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(28.226 % of family members)
Environment Ontology (ENVO) Unclassified
(37.097 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.194 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136
1INPgaii200_10281981
2C688J14111_102669942
3F14TB_1027017351
4C688J18823_105397481
5C688J35102_1196431323
6C688J35102_1204546352
7C688J35102_1209098034
8Ga0063454_1002230861
9Ga0063454_1003249982
10Ga0063454_1015268802
11Ga0063455_1002739013
12Ga0063455_1011617881
13Ga0062595_1025397741
14Ga0062594_1022538582
15Ga0062594_1024051341
16Ga0068868_1012165842
17Ga0070668_1020524941
18Ga0070671_1019554691
19Ga0070673_1008837291
20Ga0070700_1006544253
21Ga0070700_1009048941
22Ga0070665_1013070771
23Ga0068864_1017029462
24Ga0068861_1010873052
25Ga0068861_1026799101
26Ga0068860_1014628592
27Ga0068862_1024073772
28Ga0068865_1022024191
29Ga0079219_122691912
30Ga0105679_103444392
31Ga0105679_105741691
32Ga0105245_103653394
33Ga0105245_123006501
34Ga0105243_120665782
35Ga0105249_101846582
36Ga0105249_116725712
37Ga0105249_125310771
38Ga0126307_106028702
39Ga0126307_109973712
40Ga0126307_110192861
41Ga0126307_111642591
42Ga0126307_112374633
43Ga0126307_115081593
44Ga0126313_109103651
45Ga0126305_103220271
46Ga0126305_103224641
47Ga0126305_105642563
48Ga0126305_109184751
49Ga0126304_101401332
50Ga0126304_103302682
51Ga0126304_107616651
52Ga0126304_112145711
53Ga0126304_112386141
54Ga0126309_100745392
55Ga0126309_102070982
56Ga0126309_106247591
57Ga0126309_109531063
58Ga0126309_112196212
59Ga0126312_101925961
60Ga0126312_111512411
61Ga0126310_103115741
62Ga0126310_105494251
63Ga0126310_106942201
64Ga0126310_115425621
65Ga0126311_102692842
66Ga0126311_106136622
67Ga0126311_106583602
68Ga0126311_108455042
69Ga0126311_116408681
70Ga0126306_102077904
71Ga0126306_102938861
72Ga0126306_106358312
73Ga0134125_123453292
74Ga0134128_121239912
75Ga0134128_123397681
76Ga0134128_130625361
77Ga0105239_118461761
78Ga0105239_122400042
79Ga0134124_114566301
80Ga0134121_130656821
81Ga0105246_101516504
82Ga0105246_109913271
83Ga0105246_114611751
84Ga0105246_118517051
85Ga0150985_1053631532
86Ga0150985_1084293981
87Ga0150985_1114000621
88Ga0150985_1115545432
89Ga0150985_1122477191
90Ga0150985_1136865562
91Ga0150985_1186200184
92Ga0150985_1213758765
93Ga0150984_1186180811
94Ga0150984_1215571111
95Ga0162651_1000398852
96Ga0157378_123397381
97Ga0163162_102571581
98Ga0163162_109869431
99Ga0163162_126246541
100Ga0157375_130620181
101Ga0157380_127231501
102Ga0182008_102681061
103Ga0157379_120200551
104Ga0132258_137866981
105Ga0132255_1046763482
106Ga0163161_105669693
107Ga0190269_109929973
108Ga0207688_101268583
109Ga0207645_109857321
110Ga0207687_105819381
111Ga0207644_110550102
112Ga0207706_116085581
113Ga0207709_108137931
114Ga0207711_107808581
115Ga0207712_109689921
116Ga0207668_117642692
117Ga0207708_117299451
118Ga0207641_111489222
119Ga0207675_1018109812
120Ga0268266_117635451
121Ga0268266_118793881
122Ga0307318_100937762
123Ga0307288_101953592
124Ga0307409_1027062471
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.83%    β-sheet: 28.16%    Coil/Unstructured: 66.02%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MSDYLDLTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDEGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
22.6%77.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Terrestrial Soil
Serpentine Soil
Soil
Agricultural Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
4.8%28.2%8.9%6.5%5.6%3.2%4.0%7.3%6.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_102819812228664022SoilVSEFLTLTDEDDGKLFRVRVLNTGEVRIARYHCFSLAGRPLKFPCFADPDHPDDYRRWLHEGWSAQAISRVRSE
C688J14111_1026699423300001305SoilLTLTDEDDGKLFRVRVLNTGEVRIARYHCFSLAGRPLKFPCFADPDHPDDYRRWLHEGWSAQAISRVRNDPA*
F14TB_10270173513300001431SoilVSDYLTLTDEDDGKLFRVRVLRTGEERVARFHHLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDEG
C688J18823_1053974813300001686SoilDDGKLFVVHVLNTGKRRIARYHHRMLNGRRLKFPCFADPANPEDYQRWVHDGNARAVSRVRSEPPAE*
C688J35102_11964313233300002568SoilMSDYLDLTDDDDGKLFLVHVLNTGERRIARYHHHTLNGRPLKFPCFADPDHPEDYLRWVHDGSARAVSRVRSS*
C688J35102_12045463523300002568SoilVSDYLDLTEADDGKLFRVRIDNTGEERIARYHWLWLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSGEGALQK*
C688J35102_12090980343300002568SoilVSDYLDLTDEDDGKLFVVHVLNTGKRRIARYHHRMLNGRRLKFPCFADPANPEDYQRWVHDGNARAVSRVRSEPPAE*
Ga0063454_10022308613300004081SoilSPSWHEASSPVSDYLDLTDEDDGKLFVVHVLNTGKRRIARYHHRMLNGRRLKFPCFADPANPEDYQRWVHDGNARAVSRVRSEPPAE*
Ga0063454_10032499823300004081SoilMSDYLELTEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKLPCFADPDHPEDYLRWVHDGNARALSEVHPGEARSDSPVSSDRR*
Ga0063454_10152688023300004081SoilDRLRPHRPPAIDLVSDYLTLTDEDDGKLFRVRVLRTGEERVARFHPLTLAGRELRFPCFADPENPEDYLRRVHDGNARAVSRLSSD*
Ga0063455_10027390133300004153SoilMSDYLDLTDDDDGKLFLVHVLNTGERRIARYHHHTLNGRQLKFPCFADPDHPEDYLRWVHDGSARAVSRVRSS*
Ga0063455_10116178813300004153SoilVSDYLDLTDEDDGKLFVVQVLNTGERRTARYHHHTLNGRRLKFPCFADPENPEDYRRWVHDGNAR
Ga0062595_10253977413300004479SoilGRQRLPAEMSDYLDLTREDDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDDGGLRK*
Ga0062594_10225385823300005093SoilVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDGGRLER*
Ga0062594_10240513413300005093SoilEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK*
Ga0068868_10121658423300005338Miscanthus RhizosphereMSDYLTLTDGDDGKLFRVRVFNTGEERIARYHCFTLAGRDLKFPCLADPDRPEDYRRWLHSGWGATAVSPVRSPQPDP*
Ga0070668_10205249413300005347Switchgrass RhizosphereVSEFLTLTDEDDGKLFRVRVLNTGEVRIARYHRFSLVGRPLKFPCFADPDHPDDYRRWLHEGWSAQAISRVRSE*
Ga0070671_10195546913300005355Switchgrass RhizosphereMSDYLDLTEADDGKLFRIRIDNTGEERIARYHWLWLASRELRFPCFADPDHPEDYLRWVHDGNARALREVRQSEGSAPQADITGAAGCESLFR*
Ga0070673_10088372913300005364Switchgrass RhizosphereMSDYLELDEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKLPCFADPDHPEDHLRWVHDGNARAVSRVSSDEGGLQK*
Ga0070700_10065442533300005441Corn, Switchgrass And Miscanthus RhizosphereVSDYLELTEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKLPCFADPDHPEDYLRWVHDGNARA
Ga0070700_10090489413300005441Corn, Switchgrass And Miscanthus RhizosphereRLRPHRPPAIDLVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLILAGRELKLPCFADPENPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0070665_10130707713300005548Switchgrass RhizosphereMSEYLTLADEDEGKLFRVRVINTGEGRIARYHRFTLAGRPLKFPCFADPDHPEDYRRWLQSGWG
Ga0068864_10170294623300005618Switchgrass RhizosphereMSDYLDLTTEDDGKLFRIRVINTGEERIARFHHLVLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0068861_10108730523300005719Switchgrass RhizosphereMSEFLTLTDADDGKLFRVRVLNTGEERIARDRRFPLAGRDLNFPCFADLDHPEDYRRWLHSGWGAVPVSPVHSPQPDP*
Ga0068861_10267991013300005719Switchgrass RhizosphereMSDYLELSEADDGKLFRIRIINTGEERIARFHHLILAGRELRFPCFADLDHPEDYLRWVHDGNARAVSRVSSDDGGLQK*
Ga0068860_10146285923300005843Switchgrass RhizosphereMSDYLELDEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKLPCFADPDHPEDYLRWVHDGNARAVS
Ga0068862_10240737723300005844Switchgrass RhizosphereDDGKLFRIRIINTGEERIARFHHLTLAGRELRFPCFADPENPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0068865_10220241913300006881Miscanthus RhizosphereVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK*
Ga0079219_1226919123300006954Agricultural SoilVSEYLTLTDEDDGKLFRVRVFNTGEERIARHHRFSLAGRPLKFPCFADPDHPDDYRCWLRSGWGAQAISRVRSQS
Ga0105679_1034443923300007790SoilMSDYLDFTEEGDGKLLVVHVLNTGERRVACYHCFTLAARKLKFRCFADPERPDDYTRWLHDG*
Ga0105679_1057416913300007790SoilCVERLRLTDEDDGRLFRVRVINTGEERIARYHRFAIGDRLLRFPCFADPDRPDDYMHWLHEGWGGVAIAPVQVEEF*
Ga0105245_1036533943300009098Miscanthus RhizosphereVSDYLELTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELGFPCFADPENPEDYLRWVHDGNARAVSRVISDEGGLQK*
Ga0105245_1230065013300009098Miscanthus RhizosphereMSDYLDLTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK*
Ga0105243_1206657823300009148Miscanthus RhizosphereMSDYLTLTDGDDGKLFRVRVLNTGEERIARYHRFTLAGRDLKFPCLADPDRPEDYRRWLHSGWGATAVSPVRSPQPDP*
Ga0105249_1018465823300009553Switchgrass RhizosphereMSDYLTLTDGDDGKLFRVRVLNTGEERIARYHRFTLAGRDLKFPCFADPDRPEDDRRWLHSGWGAMAVSPVRSPQPDP*
Ga0105249_1167257123300009553Switchgrass RhizosphereVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDDGGLQK*
Ga0105249_1253107713300009553Switchgrass RhizosphereGLSAKMSDYLDLTHEDDGKLFRIRILNTGEERIARFHHLTLAGRELRFPCFADPENPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0126307_1060287023300009789Serpentine SoilVSEFLTLADEGDGKLFRVRVINTGEERIARYHRFALAGRPLKFPCFADPEDPEDCRHWLHSGWGAVAVSPVCSE*
Ga0126307_1099737123300009789Serpentine SoilMSGSLGLTDDDDGKLFVAHVMNTGEERTARYHRFALAGRELKFPCFADPDRPEDYLCWLHSGWGARAVSRVRSE*
Ga0126307_1101928613300009789Serpentine SoilMPEHLTLTDEDDGKLFRVRVINTGEERIARYHRFTLAGRSLKFPCFADPDDPEDYRRWLHSGWGANAVNPVREE*
Ga0126307_1116425913300009789Serpentine SoilVAVSEFLTLTDEDDGKLFRVRVLNTGEERIARYRRFTLAGRSLTFPCFADPDHPDDDRRWLHEGWGAKAVSPVRSE*
Ga0126307_1123746333300009789Serpentine SoilVSEFLTLTDEEQIARYHRFMLAGRSLKFPCFADPDHPEDYRRWLHNGWARRPSAGSTPSRCCKAFQYPRSVPLEA
Ga0126307_1150815933300009789Serpentine SoilVAVSDFLTLTDEDDGKLFRVRVLNTGEERIARYHCFTLAGRPLTFPCFADPDHPEDYRCWLHEGWGAKAVSRVHAE*
Ga0126313_1091036513300009840Serpentine SoilMSEYLDLTDDDDGKLFRVRVINTGEERIARYRCFTLAGRELRFPCFADPDHPEDYLRWVHSGNALAVSRADRSTTEAKRPAS*
Ga0126305_1032202713300010036Serpentine SoilVSEFLTLTDEDDGKLFRVRVINTGEERIARYHYFALAGRPLKFPCFADPDDPEDYRRWLHSGWGAVAVSPVRNE*
Ga0126305_1032246413300010036Serpentine SoilVSEFLMLTVEDDGKLVRVRILNTGEVQISRYHCHMIRDIPLKFPYFADPDDPEDYWYWLHSGWGAQAVSPVREE*
Ga0126305_1056425633300010036Serpentine SoilVSDYLTLTDEDDGKLFRACVLNTGEERTSHYHRFTLAGRPLTFPCFADPDHPEEYRRWLHSGWGAKAVSAVQERRGE*
Ga0126305_1091847513300010036Serpentine SoilVSEALTLTDADDGKLVRVRVLNTGERRIARYHRFTRAGRPLKFPCFADPADPEDGRGWLHSGWIAQAISPPCSERQDP*
Ga0126304_1014013323300010037Serpentine SoilMSEYLDLTDDDDGKLFVVHVFNTGERRIARYHRFAIGDMPLKFPCFAAPDNPEDYLRWPHIGQGPEL*
Ga0126304_1033026823300010037Serpentine SoilSEFLTLTDEDDGKLFRVRVINPGEVRIARYHRFTLAGRSLKFPCFADPDDPEDYRRWLHSGWGAVAVSPVSDK*
Ga0126304_1076166513300010037Serpentine SoilVSDYLDLTDEDDGKLLVVLVFNTGERRIARYHRFILAGRELKFPCFADPDNPDDYLRWLHSGWGAS
Ga0126304_1121457113300010037Serpentine SoilVSEFLTLTDEDDGKLFRVRVINTGEERIARYHRSTLAGRPLKFPCFADPDDPEDYRHWLHSGWGAVAVSPVCSE*
Ga0126304_1123861413300010037Serpentine SoilEDDGKLFRVRVINTGEERIARYHCFALAGRPLKFPCFADPDDPEDYRRWLHSGWGAVAVSPVRNE*
Ga0126309_1007453923300010039Serpentine SoilVPEYLTLTDDDDGKLFRVRVINTGEVRIARYHHFAIGDMPLKFPCFADPDNPEDYLRWPHIGQGPEL*
Ga0126309_1020709823300010039Serpentine SoilVSEFLTLTDEDDGKLFRVRVINTGEERIARYHRFMLAGRSLKFPCFADPDHPEDYRHWLHSGWGAVAVSPVRNE*
Ga0126309_1062475913300010039Serpentine SoilVSEFLTLTVEDDGKLVRVRILNTGEVQISRYHCHMIRDIPLKFPYFADPDDPEDYWYWLHSGWGAQ
Ga0126309_1095310633300010039Serpentine SoilVSDFLTLTDVDDGKLFRVHVINTGEVRIERYHRFTIAGRPLKFPCFADPNHPDDYRRWLHEGWGASADFYNCYP*
Ga0126309_1121962123300010039Serpentine SoilVSDYLTLTDADDGKLFRVRVLNTGEERIARYHRFTIAGQTLKFPCFADPDDPDDYRRWLHLGWSAEAVSQVRSWNGSARHV*
Ga0126312_1019259613300010041Serpentine SoilVSEVLRLADEDDGKLFRVRILNTGEERIARYHRFTLAGRPLKFPCFADPDDPEDYRRWLHSGWGAVAVSPVCSE*
Ga0126312_1115124113300010041Serpentine SoilVSEFLTLTDEDDGKLFRVRVINTGEERIARYHRFTLAGRPLKFPCFTDPDDPEDYRRWLHSGWGAVAVSPVRDE*
Ga0126310_1031157413300010044Serpentine SoilWTKPRRAVSKFRTLTDEDDGKLYRVRVLNTGEVRIARHHRFTFAGRSLTFPCFADPDRPEDDRRWLHEGWGAQAVSPVGKRDD*
Ga0126310_1054942513300010044Serpentine SoilVSEFLTLTDEDDGKLFRVRVLNTGEERIARYHRFSLVGRPLKFPCFADPDHPDDYQRWLHEGWGAQAISRVRNDPA
Ga0126310_1069422013300010044Serpentine SoilVSDFLTLTDADDGKLFRVRVLNTGEERIARYHCFTLAGQPLTFPCFADPDHPDDYRRWLYEGWGAQAVSRVHAE*
Ga0126310_1154256213300010044Serpentine SoilKLFRVRVLNTSEERIARYPCFTLAGQPLTFPCFADPDHPEDDRRWLHNGWGAKAVSRGHAE*
Ga0126311_1026928423300010045Serpentine SoilVSEFLTLTDEDDGKLFRVRVLNTGEVRIARYHRFSLVGRPLKFPCFADPDHLDDYRRWLHEGWGAQAISRVRNDPA*
Ga0126311_1061366223300010045Serpentine SoilVSEFLTLTDEDDGKLFCVRVINTGEERVARYHRFMLAGRPLKFPCFADPDNPEDYWRWLHSGWGAVAISPVGDK*
Ga0126311_1065836023300010045Serpentine SoilVSEFLTLADEGDGKLFRVRGINTGEERIARYHRFAPAGRPLKFACFADPDHPEDYRHWLHSGWGAVAVSPVCRE*
Ga0126311_1084550423300010045Serpentine SoilVSEFLTLTDEDDRKLFRVRVLNTGEERIARYHRFTIAGRPLKFPCFADPNHPDDYRRWLHEGWSASAVGPVCEE*
Ga0126311_1164086813300010045Serpentine SoilVAVSEFLTLTDEDDGKLFRVRVLNTGEERIARYHCFMLAGQPLTFPCFADPDHPEDDRRWLHNGWGAKAVSRVHAE*
Ga0126306_1020779043300010166Serpentine SoilMPEHLTLTDEDDGKLFRVRVINTGEERIARYHRFTLAGRSLKFPCFADPDDPEDYRRWLHSGWGANAVSPVREE*
Ga0126306_1029388613300010166Serpentine SoilVSEYVTLTDDDDGKLFRVRVINTGEERIARYRCFTLAGRELRFPCFADPDHPEDYLRWVHSGNALAVSRADRSTTEVKRPAS*
Ga0126306_1063583123300010166Serpentine SoilMSLPKGLMPEHLTLTDEDDGKLFRVRVINTGEERIARYHRFALAGRSLKFPCFADLNDPEDYRHWLHSGWGAVAVSPVCSE*
Ga0134125_1234532923300010371Terrestrial SoilVSEFLTLTDEDDGKPFRVRVINTEEVRIARYHCFTLAGRELRFSCFADPENPEDYRRWLHSGWAAVATSRVRGE*
Ga0134128_1212399123300010373Terrestrial SoilVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARALSEVHPGEGSAPQGDSSTGYA*
Ga0134128_1233976813300010373Terrestrial SoilIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDGGRLER*
Ga0134128_1306253613300010373Terrestrial SoilEDGTLVRVCVLNSGEDRMARDHRFTLAGQDLKFPRFADPDNPEDYRRWLTSGWGAAAISPVRSPQPDP*
Ga0105239_1184617613300010375Corn RhizosphereMSEFLTLTDADDGKLFRVRVLNTGEERIARDRRFPLAGRDLNFPCFADLDHPEDYRRWLHSGWGAVPVSPVHSPQPDP
Ga0105239_1224000423300010375Corn RhizosphereMSDYLDLTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDEG
Ga0134124_1145663013300010397Terrestrial SoilVSDYLDLTEEDDGQLFVVHVLNTGERRIVRYHRHTFDGRRLKFPCFADPENPEDYRRWVHDGNPRAVSRVNSSVPTSA
Ga0134121_1306568213300010401Terrestrial SoilSDYLDLTDKDDGKLFRIRVFNTGEERIARFHHLTLAGRALRFPCFADPENPEDYLRWVHDGNARAVSRLSSD*
Ga0105246_1015165043300011119Miscanthus RhizosphereVSDYLTLTAADDGKLFRIRIDNTGEERIARYHYLTLADRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK*
Ga0105246_1099132713300011119Miscanthus RhizosphereVTTPVSDYLDLTEADDGKLFCVRIDNTGEERIARYHWLWLAGRELKPPCFADPDHPEDYLRWVHDGNARAVSRVSSGEGALQK*
Ga0105246_1146117513300011119Miscanthus RhizosphereMSDYLTLTDGDDGKLFRVRVFNTGEERIARYHCFTLAGRDLKFPCLADPDRPEDYRRWLHSGWGAMAVSPVRSPQPDP*
Ga0105246_1185170513300011119Miscanthus RhizosphereMSEYLDLGEADDGELFLIRIDNTGEGRIARYHYLTLAGRELRFPCFADPDHSEDYLRWVHDGNARALSEVHPGEGSAPQGDSSKGYA*
Ga0150985_10536315323300012212Avena Fatua RhizosphereVSDYLDLTHEDDGKLFRIRVINTGEERIARFHHLTLNGRELRFPCFADPNHPEDYLRWVHDGNARAVSRLSSD*
Ga0150985_10842939813300012212Avena Fatua RhizosphereVSDYLTLTAEDNGKLFRIRIINTGEERIARFHHLMLAGRELWFPCFADPDHPEDYLRWVHDRNARAVSHVSSDESALQK*
Ga0150985_11140006213300012212Avena Fatua RhizosphereVSEFLTLTDEDDGKLFRVRVLNTGEVRIARYHRFSLVGRPLKFPCFADLDHPDDYQRWLHEGWGAQAMSR
Ga0150985_11155454323300012212Avena Fatua RhizosphereVPDFLDLDEADAGKLFRIRIDNTGEERIARYHWLRLAGRELRFPCFAGPDHPEDYLRWVHDGNARALSEVHPGEVSAPQGDSSTGYA*
Ga0150985_11224771913300012212Avena Fatua RhizosphereMSDYLDLTEADDGKLFRVRIDNTGEERIARYHWLWLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVDQGERSASQGGSAEPQDAGGSSDSAISPPIG*
Ga0150985_11368655623300012212Avena Fatua RhizosphereMSDYLTLTDGDDGKLFRVRVLNTGEERIARYHRFTLAGRDLKFPCFADPDRPEDDRSWLHSGWGAMAVSPVRSPQPDP*
Ga0150985_11862001843300012212Avena Fatua RhizosphereVSEFLTLTDEDDGKLFRVHVLNTGERRIARYHRFTIAGRPLKFPCFADPNHPDDYRRWLHESWARPSARRTWK
Ga0150985_12137587653300012212Avena Fatua RhizosphereVPDFLELDEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARALSEVHPGEARSDSPVSSDRR*
Ga0150984_11861808113300012469Avena Fatua RhizospherePSVPPVSDYLTLTDADDGTLFRVRVLNTGEERIARYHRFTLAGRNLKFPCFADPDRPEDYRRWLHSGWGAMAVSPIRSPQQDP*
Ga0150984_12155711113300012469Avena Fatua RhizosphereVSDYLTLTDADDGKLFQVRVLNTGEERIARYHRFTLAGRNLKFPGFADPDRPEDYRRWLHSGWGAIAVSPVYSPQQDP*
Ga0162651_10003988523300012938SoilDEDDGKLFRVRVLNTGEVRIARYHRFSLVGRPLKFPCFADPDHPDDYRRWLHEGWSAQAISRVRNDPA*
Ga0157378_1233973813300013297Miscanthus RhizosphereMSDYLTLTDGDDGKLFRVRVFNTGEEQIARYHCFTLAGRDLKFPCLADPDRPEDYRRWLHSGWGATAVS
Ga0163162_1025715813300013306Switchgrass RhizosphereMSDFLDLGEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKLPCFADPDHPEDYLRWVHDGNARAVSRVNFDES
Ga0163162_1098694313300013306Switchgrass RhizosphereVSEFLTLTDEDDGKLFRVRLLNTGEERIARYHCFSLAGRPLKFPCFADPDHPDDDRRWLHEGWSAQAISRIRNDPA*
Ga0163162_1262465413300013306Switchgrass RhizosphereGKLFRVRVLHTGEERIARYHCFTLAGRELRFPCFADPENPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0157375_1306201813300013308Miscanthus RhizosphereMSDYLELTEADDGKLFRIRIDNTGEERIARYHYLTLADRELRFPCFADPDHPEDYLRWVHDGNARALSEVHPGEARSDSPVSSDRR*
Ga0157380_1272315013300014326Switchgrass RhizosphereMSDYLELDEADDGKLFRIRIDNTGEERIARYHWLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDDGGLQK*
Ga0182008_1026810613300014497RhizosphereMSDYLELTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDNGGLQK*
Ga0157379_1202005513300014968Switchgrass RhizosphereRIRIDNTGEERIARYHYLTLAGRELRFPCFADPENPEDYLRWVHDGNARAVSRVSSDESALQK*
Ga0132258_1378669813300015371Arabidopsis RhizosphereVPDFLELDEADDGKLFRIRIDNTGEERIARYHWLWLAGRELRFPCFADPDHPEDYLRWVHDGNARALSEVRQGEGSAQPAQQSCNTLTQI*
Ga0132255_10467634823300015374Arabidopsis RhizosphereVPDFLELDEADDGKLFRIRIDNTGEERIARYHWLWLAGRELRFPCFADPDHPEDYLRWVHDGNARAISRIE*
Ga0163161_1056696933300017792Switchgrass RhizosphereVSDYLTLTDADDGKLFRVRVLNTGEERIARDRRFPLAGRDLKFPCFADPDHPEDYLRWLHSGWGAVAVRPVHSPQPD
Ga0190269_1099299733300018465SoilLTDEDDGKLFRVRVLNTGEVRIARYHCFSLAGRPLKFPCFADPDHPDDYRRWLHEGWSAQAMSRVRNDPA
Ga0207688_1012685833300025901Corn, Switchgrass And Miscanthus RhizosphereVSDYLTLTAADDGKLFRIRIDNTGEERIARYHYLTLADRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK
Ga0207645_1098573213300025907Miscanthus RhizosphereVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDESALQK
Ga0207687_1058193813300025927Miscanthus RhizosphereMNDYLDLGEADDGKLFRIRIDNTGEERIARYHWLWLAGRELKPPCFADPDHPEDYLRWVHDGNARAVSR
Ga0207644_1105501023300025931Switchgrass RhizosphereMSDYLDLTEADDGKLFRIRIDNTGEERIARYHYLTLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDEGALQK
Ga0207706_1160855813300025933Corn RhizosphereMSDYLELDEADDGKLFRIRIDNTGEERIARYHWLWLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVSSDDGGLQK
Ga0207709_1081379313300025935Miscanthus RhizospherePPAIDLVSDYLTLTAADDGKLFRIRIINTGEERIARFHHLMLAGRELRFPCFADPDHPEDYLRWVHDGNARAVSRVNSDGGRLER
Ga0207711_1078085813300025941Switchgrass RhizosphereVSDYLTLTAADDGKLFRIRIDNTGEERIARYHYLTLAGRELGFPCFADPENPEDYLRWVHDGNARAVSRVISDEGGLQK
Ga0207712_1096899213300025961Switchgrass RhizosphereMSDYLTLTDGDDGKLFRVRVLNTGEERIARYHRFTLAGRDLKFPCFADPDRPEDDRRWLHSGWGAMAVSPVRSPQPDP
Ga0207668_1176426923300025972Switchgrass RhizosphereMSDYLTLTDGDDGKLFRVRVLNTGEERIARYHCFTLAGRDLKFPCFADPDRPEDDRRWLHSGWGAMAVSPVRSPQPDP
Ga0207708_1172994513300026075Corn, Switchgrass And Miscanthus RhizosphereMSEFLTLTDADDGKLFRVRVLNTGEERIARYHRFTLAGQELKFPCFADPDRPEDYLRWLHSGWGAMAVSPVHSKKLRRQSELSGRLGRF
Ga0207641_1114892223300026088Switchgrass RhizosphereVSEFLTLTDEDDGPLFRVRVLNTGEERIARDHCFTLAGRDLKFPCFADPDHPEDYLRWLHSGWGAVPVSPVHSP
Ga0207675_10181098123300026118Switchgrass RhizosphereMSEFLTLTDEDDGKLFRVRVLNTGEVRIARYHRFSLVGRPLKFPCFADPDHPDDYRRWLHEGWGAQAISHVRNLAPPWSRGSD
Ga0268266_1176354513300028379Switchgrass RhizosphereMSEYLTLADEDEGKLFRVRVINTGEGRIARYHRFTLAGRPLKFPCFADPDHPEDYRRWLQSGWGAVAV
Ga0268266_1187938813300028379Switchgrass RhizosphereVRLSVSEYLELSEADDGKLFRIRIDNTGEERIARYHYLTLADRELRFPCFADPDHPEDYLRWVHDGNARALSEVHPGEARSDSPVSSDRR
Ga0307318_1009377623300028744SoilVSEFLTLTDEDDGKLFRVRVLNTGAVRIARYPRFSLVGRPLKFPCFADPDHPDDYRRWLHEGWSAQAMSRVRNDPA
Ga0307288_1019535923300028778SoilVSEFLTLTDEDDGKLFRVRLLNTGAVRIARYHCFSLAGRPLKFPCFADPDHPDDYRRWLHEGWSAQAISRVRNDPA
Ga0307409_10270624713300031995RhizosphereSEFLTLTDEDDGKLFRVRVLNTGEERIARYPCFTLAGQPLTFPCFADPDHPEDDRRWLHNGWGAKAVSRGHAE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.