Metagenome Family F069416

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069416
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	74 residues
Representative Sequence	NAEFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNR
Number of Associated Samples	99
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.35 %
% of genes near scaffold ends (potentially truncated)	78.23 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.935 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.903 % of family members)
Environment Ontology (ENVO)	Unclassified (33.871 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.871 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.00% β-sheet: 0.00% Coil/Unstructured: 37.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02801	Ketoacyl-synt_C	21.77
PF00512	HisKA	7.26
PF14361	RsbRD_N	5.65
PF06803	DUF1232	1.61
PF02502	LacAB_rpiB	0.81
PF13676	TIR_2	0.81
PF00478	IMPDH	0.81
PF08240	ADH_N	0.81
PF14559	TPR_19	0.81
PF00069	Pkinase	0.81
PF01510	Amidase_2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.23
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.61
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	31.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	31.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	24.19 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.19 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.42 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.19 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	3.23 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.42 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.61 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.19 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.23 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.42 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.61 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.19 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.23 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.42 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.61 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1.61 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100640741	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300000890\|JGI11643J12802_11573656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300000956\|JGI10216J12902_102297193	Not Available	886	Open in IMG/M
3300002899\|JGIcombinedJ43975_10007340	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300004479\|Ga0062595_100486469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	921	Open in IMG/M
3300004479\|Ga0062595_101010170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	716	Open in IMG/M
3300004479\|Ga0062595_101707762	Not Available	593	Open in IMG/M
3300005162\|Ga0066814_10100744	Not Available	541	Open in IMG/M
3300005266\|Ga0065702_100745	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005290\|Ga0065712_10207562	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300005290\|Ga0065712_10758841	Not Available	520	Open in IMG/M
3300005295\|Ga0065707_10298550	Not Available	988	Open in IMG/M
3300005329\|Ga0070683_101750074	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005330\|Ga0070690_100097741	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300005332\|Ga0066388_101117793	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300005332\|Ga0066388_104140037	Not Available	739	Open in IMG/M
3300005332\|Ga0066388_104231798	Not Available	732	Open in IMG/M
3300005332\|Ga0066388_107370572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	552	Open in IMG/M
3300005344\|Ga0070661_100007100	All Organisms → cellular organisms → Bacteria	7725	Open in IMG/M
3300005345\|Ga0070692_11386852	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005365\|Ga0070688_100736990	Not Available	766	Open in IMG/M
3300005434\|Ga0070709_10615240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	838	Open in IMG/M
3300005439\|Ga0070711_100229871	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300005439\|Ga0070711_101825521	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005440\|Ga0070705_100874599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	721	Open in IMG/M
3300005457\|Ga0070662_100821406	Not Available	791	Open in IMG/M
3300005466\|Ga0070685_10345434	Not Available	1016	Open in IMG/M
3300005539\|Ga0068853_102332321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	518	Open in IMG/M
3300005543\|Ga0070672_100397782	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005546\|Ga0070696_100651211	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005564\|Ga0070664_102291500	Not Available	512	Open in IMG/M
3300005618\|Ga0068864_100908766	Not Available	870	Open in IMG/M
3300005764\|Ga0066903_100635290	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300005764\|Ga0066903_101715399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300005937\|Ga0081455_10032989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4658	Open in IMG/M
3300006163\|Ga0070715_10021421	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300006163\|Ga0070715_10816796	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300006175\|Ga0070712_100152177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1777	Open in IMG/M
3300006175\|Ga0070712_100550887	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300006852\|Ga0075433_10282072	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300006954\|Ga0079219_11446920	Not Available	618	Open in IMG/M
3300007788\|Ga0099795_10039274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1675	Open in IMG/M
3300009148\|Ga0105243_10671579	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300009156\|Ga0111538_13843815	Not Available	520	Open in IMG/M
3300009176\|Ga0105242_11572663	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010159\|Ga0099796_10057409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1369	Open in IMG/M
3300010337\|Ga0134062_10535533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M
3300010358\|Ga0126370_11727704	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_12696285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300010375\|Ga0105239_12548818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300010376\|Ga0126381_102735894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300010396\|Ga0134126_11761922	Not Available	679	Open in IMG/M
3300012198\|Ga0137364_10212444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1420	Open in IMG/M
3300012204\|Ga0137374_10464949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300012210\|Ga0137378_10252358	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300012349\|Ga0137387_10501999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300012350\|Ga0137372_10138549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1999	Open in IMG/M
3300012361\|Ga0137360_11446144	Not Available	591	Open in IMG/M
3300012514\|Ga0157330_1038564	Not Available	632	Open in IMG/M
3300012582\|Ga0137358_10069659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2361	Open in IMG/M
3300012904\|Ga0157282_10221723	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012906\|Ga0157295_10373004	Not Available	524	Open in IMG/M
3300012914\|Ga0157297_10447081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	530	Open in IMG/M
3300012914\|Ga0157297_10508628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300012925\|Ga0137419_11385060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300012929\|Ga0137404_12060723	Not Available	533	Open in IMG/M
3300012930\|Ga0137407_10541774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1089	Open in IMG/M
3300012930\|Ga0137407_11124481	Not Available	745	Open in IMG/M
3300012948\|Ga0126375_11421997	Not Available	589	Open in IMG/M
3300012951\|Ga0164300_10112738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1214	Open in IMG/M
3300012955\|Ga0164298_10366134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300012957\|Ga0164303_10001896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5874	Open in IMG/M
3300012958\|Ga0164299_10635720	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012985\|Ga0164308_10677619	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012988\|Ga0164306_10660291	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300013104\|Ga0157370_10166796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2048	Open in IMG/M
3300013296\|Ga0157374_12721951	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300013306\|Ga0163162_10395402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1515	Open in IMG/M
3300013306\|Ga0163162_10662281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1167	Open in IMG/M
3300013308\|Ga0157375_13254194	Not Available	542	Open in IMG/M
3300014968\|Ga0157379_10249234	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300015371\|Ga0132258_10042208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10368	Open in IMG/M
3300015371\|Ga0132258_11590503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1650	Open in IMG/M
3300015371\|Ga0132258_11946024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1480	Open in IMG/M
3300015372\|Ga0132256_100250080	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300015373\|Ga0132257_101264954	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300015373\|Ga0132257_103473166	Not Available	573	Open in IMG/M
3300015373\|Ga0132257_103506576	Not Available	571	Open in IMG/M
3300015374\|Ga0132255_100012929	All Organisms → cellular organisms → Bacteria	9905	Open in IMG/M
3300015374\|Ga0132255_100445351	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300015374\|Ga0132255_101078475	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300015374\|Ga0132255_104923851	Not Available	566	Open in IMG/M
3300016294\|Ga0182041_11542752	Not Available	612	Open in IMG/M
3300016371\|Ga0182034_11124323	Not Available	681	Open in IMG/M
3300019789\|Ga0137408_1066668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3098	Open in IMG/M
3300019886\|Ga0193727_1061533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1183	Open in IMG/M
3300019886\|Ga0193727_1172335	Not Available	564	Open in IMG/M
3300020062\|Ga0193724_1074226	Not Available	708	Open in IMG/M
3300021510\|Ga0222621_1003487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2608	Open in IMG/M
3300022756\|Ga0222622_11412736	Not Available	512	Open in IMG/M
3300022898\|Ga0247745_1082557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	540	Open in IMG/M
3300025315\|Ga0207697_10297986	Not Available	715	Open in IMG/M
3300025905\|Ga0207685_10444637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300025907\|Ga0207645_10087095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2007	Open in IMG/M
3300025933\|Ga0207706_10580841	Not Available	963	Open in IMG/M
3300025936\|Ga0207670_10199590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1519	Open in IMG/M
3300025936\|Ga0207670_11265262	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300025938\|Ga0207704_11787026	Not Available	529	Open in IMG/M
3300025945\|Ga0207679_11603491	Not Available	596	Open in IMG/M
3300025981\|Ga0207640_11460339	Not Available	614	Open in IMG/M
3300026023\|Ga0207677_10333739	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300027512\|Ga0209179_1016954	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300028596\|Ga0247821_10911435	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300028708\|Ga0307295_10066198	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300028828\|Ga0307312_10766899	Not Available	639	Open in IMG/M
3300031231\|Ga0170824_103180139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300031231\|Ga0170824_117227556	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031231\|Ga0170824_123403190	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300031469\|Ga0170819_16572020	Not Available	560	Open in IMG/M
3300031474\|Ga0170818_105116504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300031474\|Ga0170818_112376811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1796	Open in IMG/M
3300031954\|Ga0306926_12892439	Not Available	516	Open in IMG/M
3300032075\|Ga0310890_10519766	Not Available	908	Open in IMG/M
3300033289\|Ga0310914_11495534	Not Available	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.55%
Host-Associated	Host-Associated	31.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.94%
Plants	Host-Associated → Plants	31.45%
Aquatic	Environmental → Aquatic	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.71%
Sediment	Environmental → Aquatic → Sediment	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.58%
Loam	Environmental → Terrestrial → Soil → Loam	19.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	10.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005266	Switchgrass rhizosphere microbial communities from Rose Lake, Michigan, USA - BV2.2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1006407411	3300000559	Soil	ITHLLREPLGPLLLGLEVLLREESLSPRGVEIIEVLHRNVQKEAEAIEELLRSTELFEKDASQGR*
JGI11643J12802_115736562	3300000890	Soil	IQRITHLLREPLGPLLIGLEVLLHEEALSPRGVEMIGLLQRGVKKEAEAIEELLRSIGS*
JGI10216J12902_1022971932	3300000956	Soil	AGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQNS*
JGIcombinedJ43975_100073405	3300002899	Soil	RELNATRKPGVTGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEIIEVLHRNVQKEAEAIEELLRSTELFEKDASQGR*
Ga0062595_1004864693	3300004479	Soil	REPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKNAAQDR
Ga0062595_1010101702	3300004479	Soil	EPLGPLLLGLEVLLREESLSPRGVEMIEVLHRNVQKEAEAIEELLRSTELFEKDASQGR*
Ga0062595_1017077622	3300004479	Soil	EFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGLLQRGVKKEAEAIEELLKSIRS*
Ga0066814_101007442	3300005162	Soil	SVNRNAEFVQHITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEAEAIEELLRSTELLEKDAVKNR*
Ga0065702_1007451	3300005266	Switchgrass Rhizosphere	VQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGVLQRGVKKEADAIEELLRSTELFEKDAAR*
Ga0065712_102075621	3300005290	Miscanthus Rhizosphere	QFVEECQDSVRQLNAGRKPGAGGNAEFVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0065712_107588412	3300005290	Miscanthus Rhizosphere	VRPLNAGLEPSVHSNAKFVQRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG*
Ga0065707_102985501	3300005295	Switchgrass Rhizosphere	EFVHRITHLLREQLGPLLLGLEVLLREEALSHRGVEMIGVLQRGVKKEARAIEELLRSTDLFEKDAVQRT*
Ga0070683_1017500743	3300005329	Corn Rhizosphere	QRITHVLREPLGPLLLGLEVLLREESLSARGVEMIGLLHRGVKKEADAIEELLRSTDLFEKEPSR*
Ga0070690_1000977411	3300005330	Switchgrass Rhizosphere	NAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0066388_1011177933	3300005332	Tropical Forest Soil	EFIQRVTHLLREPLGPMLIGLEVLLREEALSPRGVEMIEVLRRGVRKEAQAIEELLKSTELFEKNAAQSS*
Ga0066388_1041400372	3300005332	Tropical Forest Soil	EFIQRVTHLLREPLGPMLIGLEVLLREEALSPRGVEMIEVLRRGVRKEAQAIEELLKSTELFERNAAQSS*
Ga0066388_1042317983	3300005332	Tropical Forest Soil	FNARMKPRETGNADFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIEVLHRGVQKEAQAIEELLRSTEFFEKDSSQKS*
Ga0066388_1073705721	3300005332	Tropical Forest Soil	VHQLHAELKPTATNNPEFIQRITHLLREPLGPLLIGLEVLLREEDLSPRGVEMIGVLQRGVKKEAEAIEELLRSIGS*
Ga0070661_1000071001	3300005344	Corn Rhizosphere	MLREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAIEELLRSTELFEKDTG*
Ga0070692_113868522	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	SATLEPRETGNAEFVQQITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLQRAVKKEAEAIEELLKSTEFFEKNATQNR*
Ga0070688_1007369903	3300005365	Switchgrass Rhizosphere	ITHVLREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAIEELLRSTELFEKDTG*
Ga0070709_106152401	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0070711_1002298714	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RQEAVRQLSAIPNPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0070711_1018255211	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KPSVRGNAEFVQRITHVLREPLGPLLLGLEVLLREEALSPRGVEMIGLLQRGVKKEADAIEELLRSTEFFEKDAAR*
Ga0070705_1008745992	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0070662_1008214062	3300005457	Corn Rhizosphere	THLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTELFEKDAAR*
Ga0070685_103454344	3300005466	Switchgrass Rhizosphere	HVLREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAIEELLRSTELFEKDTG
Ga0068853_1023323211	3300005539	Corn Rhizosphere	AGLEPSVHSNAKFVQRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG*
Ga0070672_1003977821	3300005543	Miscanthus Rhizosphere	NAGRKPGAGGNAEFVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0070696_1006512113	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0070664_1022915001	3300005564	Corn Rhizosphere	HLLREPLGPLLLGLEVLLHEEALSPRGVEMIEMLHRGVQKEAQAIEDLLRSTEFFEKDASQNE*
Ga0068864_1009087661	3300005618	Switchgrass Rhizosphere	AAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0066903_1006352903	3300005764	Tropical Forest Soil	EFLQRITHLLREPLGPLLLGLEVLLREEALSSQGVEMIGLLQRAVKKEAEAIEEVLRSIES*
Ga0066903_1017153991	3300005764	Tropical Forest Soil	PEFIQRVTHLLREPLGPMLIGLEVLLREEALSPRGVEMIEVLRRGVRKEAQAIEELLKSTELFEKNAAQSS*
Ga0081455_100329896	3300005937	Tabebuia Heterophylla Rhizosphere	VRELNATRKPGGTGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIEVLHRNVQKEAEAIEELLRSTELFEKDASQGR*
Ga0070715_100214215	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PKPIAAANAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0070715_108167962	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	NAGLKPRVTANADFVQRITHILREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVEKEAQAIEELLRSTELFEKDAAQNS*
Ga0070712_1001521771	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TANADFVQRITHILREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVEKEAQAIEELLRSTELFEKDAAQNS*
Ga0070712_1005508871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NAEFVQRITHLLREPLGPLLLGLEVLLHEEALSPRGVEMIEVLRRGVRKEAEAIEELLSSTELFEKEATQNR*
Ga0075433_102820722	3300006852	Populus Rhizosphere	LHAGLKPTATNNPEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGLLQRGVKKEAEAIEGLLRSIGS*
Ga0079219_114469201	3300006954	Agricultural Soil	PNPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0099795_100392743	3300007788	Vadose Zone Soil	VRQLNAGVEPTVAGNAEFIQRITHLLRDPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNR*
Ga0105243_106715791	3300009148	Miscanthus Rhizosphere	LREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTELFKKDAAR*
Ga0111538_138438151	3300009156	Populus Rhizosphere	TRNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLQRNVQKEAQAIEELLRSTELFEKGATQNR*
Ga0105242_115726633	3300009176	Miscanthus Rhizosphere	EPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0099796_100574093	3300010159	Vadose Zone Soil	VRQLNAGVEPTVAGNAEFIQRITHLLREPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNS*
Ga0134062_105355331	3300010337	Grasslands Soil	LLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGIKKEAQAIEELLRSTELFEKDAAQNR*
Ga0126370_117277041	3300010358	Tropical Forest Soil	VRQLHASLKPKVAGNAEFVQRITHLLREPLGPLFLALEVLLREEALSSRGVEMIGVLQRGVEKEAEAIEELLRSTELFEKDVSEKR*
Ga0126372_126962851	3300010360	Tropical Forest Soil	KGTTNPEFVQRITHVLREPLGPLLLGLEVLLREETLSPRGVEMIGVLQRGVKKEAQAIEELLRSTELVQKDAREEGESNRIYRDS*
Ga0105239_125488181	3300010375	Corn Rhizosphere	RLKPSITGNTEFVQRITHLLREPLGPLLLGLEVLLSEEALSPRGVEMIGLLQRGVKKEADAIEELLRSTELFEKDAAQNS*
Ga0126381_1027358941	3300010376	Tropical Forest Soil	IPRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIEVLQRGVKKEAEAIEELLRSTEFFEKDASQNR*
Ga0134126_117619221	3300010396	Terrestrial Soil	AVRQLSAIPNPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0137364_102124443	3300012198	Vadose Zone Soil	VRQLNAGLEPTVAGNAEFIQRITHLLREPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNG*
Ga0137374_104649492	3300012204	Vadose Zone Soil	VSQLNARLKPSVTGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLHRGVEKEAQAIEDLLKSTELFEKDAAQNR*
Ga0137378_102523581	3300012210	Vadose Zone Soil	AEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEKLLRSTELFEKDAVQNR*
Ga0137387_105019992	3300012349	Vadose Zone Soil	VRQLNAGLEPTVAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKGGPSD*
Ga0137372_101385491	3300012350	Vadose Zone Soil	VRQLNAGLKPTVAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNR*
Ga0137360_114461442	3300012361	Vadose Zone Soil	QRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNG*
Ga0157330_10385643	3300012514	Soil	LREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0137358_100696593	3300012582	Vadose Zone Soil	VRQLNAGLEPTVAGNAEFIQRITHLLREPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNR*
Ga0157282_102217231	3300012904	Soil	RITHLLREPLGPLLLGLDVLLHEEFLSPRGVEMIGVLQRGVQKEAQAIEELLRSTELFEKDAAR*
Ga0157295_103730042	3300012906	Soil	VRPLNAGLEPSVHSNAKFVQRITHVLREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAIEELLRSTELFEKDAG*
Ga0157297_104470813	3300012914	Soil	GNAEFVQRITHILREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0157297_105086282	3300012914	Soil	REPLGPLLLGLDILLREESLSPRGVEMIGVLQRGVKKEADAIEELLRSTELFEKDAAR*
Ga0137419_113850602	3300012925	Vadose Zone Soil	MQNLFSALRTFLREPLAPLLLGLEVLLREEALSPRGVEMMGVLQRGVKKEAQAIEELRSTELFEKDAAQNR*
Ga0137404_120607232	3300012929	Vadose Zone Soil	QLNAGLGPTVAGNAEFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNG*
Ga0137407_105417744	3300012930	Vadose Zone Soil	MQNLFSALRTLLREPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNR*
Ga0137407_111244812	3300012930	Vadose Zone Soil	QLNAGLEPTVAGNAEFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNR*
Ga0126375_114219971	3300012948	Tropical Forest Soil	RQEAGHQLHAELKLTATKNPEYIQRITHLLREPLGPLLIGLEVLLHEEALSPRGVEMIGVLQRGAEKEAEAIKELLRSIGS*
Ga0164300_101127382	3300012951	Soil	VRQLNATVKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0164298_103661341	3300012955	Soil	VGQLNVPLKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAA
Ga0164303_100018965	3300012957	Soil	VRQLNATVKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKNAAQDR*
Ga0164299_106357203	3300012958	Soil	LREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDATQNR*
Ga0164308_106776191	3300012985	Soil	PGNAEFVQRITHILREPLGPLLLGLEVLLREESLSPRGVEMIGILHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0164306_106602913	3300012988	Soil	SVTGNADFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMVEVLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0157370_101667961	3300013104	Corn Rhizosphere	FVQRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG*
Ga0157374_127219512	3300013296	Miscanthus Rhizosphere	NAEFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRNVKKEAEAIEELLRSTELSQKNPAQNI*
Ga0163162_103954024	3300013306	Switchgrass Rhizosphere	MNATVKPNVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTELLEKDPAT*
Ga0163162_106622814	3300013306	Switchgrass Rhizosphere	GNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIEVLHRNVQKEAAAIEELLRSTELFEKDAQQGR*
Ga0157375_132541941	3300013308	Miscanthus Rhizosphere	LREPLGPLLLGLEVLLREEALSPRGAEMIGVLQRNVKKEAEAIEELLRSTELSEKNPAQNS*
Ga0157379_102492344	3300014968	Switchgrass Rhizosphere	SAIPNPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIEVLQRGVKKEAEAIEELLRSTELFEKDASQDS*
Ga0132258_100422089	3300015371	Arabidopsis Rhizosphere	VRQLSATSKPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEDLSSRGVEMIEVLQRAVNKEAEAIEELLRSTEFFEKDASQNR*
Ga0132258_115905031	3300015371	Arabidopsis Rhizosphere	VGQLNVPLKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0132258_119460243	3300015371	Arabidopsis Rhizosphere	VRQVNATPKPGVPRNAKFVQHITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0132256_1002500801	3300015372	Arabidopsis Rhizosphere	ASLKPRVTRNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLQRNVQKEAQAIEELLRSTELFEKDASPNR*
Ga0132257_1012649541	3300015373	Arabidopsis Rhizosphere	FVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0132257_1034731661	3300015373	Arabidopsis Rhizosphere	REPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAAR*
Ga0132257_1035065761	3300015373	Arabidopsis Rhizosphere	LKPTATNNPEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGLLQRGVKKEAEAIEGLLRSIGS*
Ga0132255_1000129293	3300015374	Arabidopsis Rhizosphere	LSATSKPTAAGNAEFIQRITHLLREPLGPLLLGLEVLLREEDLSSRGVEMIEVLQRAVNKEAEAIEELLRSTEFFEKDASQNR*
Ga0132255_1004453511	3300015374	Arabidopsis Rhizosphere	NATLKPSVNRNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEAQAIEELLRSTELLEKDAVKNR*
Ga0132255_1010784751	3300015374	Arabidopsis Rhizosphere	NAEFVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR*
Ga0132255_1049238511	3300015374	Arabidopsis Rhizosphere	ITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLHRGVQKEAQAIEELLRSTEFFEKEAAQNR*
Ga0182041_115427521	3300016294	Soil	RITHLLREPLGPLLLGLEVLLREESLSTRGIEMIGVLHRNVQKEAQAIEQLLRSTELFEKNASQNR
Ga0182034_111243232	3300016371	Soil	GTANAEFVQRITHLLREPLGPLLFGLEVLLREETLSPRGVEMIGVLQRGVKKEAHAIEELLRSTELFEKDAAQNR
Ga0137408_10666682	3300019789	Vadose Zone Soil	MQNLFSALRTLLREPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNR
Ga0193727_10615333	3300019886	Soil	VRQINATVKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTE
Ga0193727_11723353	3300019886	Soil	NAEFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDAAQNR
Ga0193724_10742261	3300020062	Soil	ADVNARLKPSITGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGVLHRGVKKEADAIEELLGSTELFEKTRAR
Ga0222621_10034873	3300021510	Groundwater Sediment	MNGTVKPNVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGGEMIGLLQRGVKKEADAIEELLRSTELFEKDAAK
Ga0222622_114127361	3300022756	Groundwater Sediment	ITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTELFEKDTAQNR
Ga0247745_10825573	3300022898	Soil	LREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR
Ga0207697_102979862	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	PTATNNPEFIQRITHLLREPLGPLLLGLEVLLREEGLSPRGVEMIGLLQRGVKKEAEAIEGLLRSIGS
Ga0207685_104446371	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RVTANADFVQRITHILREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVEKEAQAIEELLRSTELFEKDAAQNS
Ga0207645_100870953	3300025907	Miscanthus Rhizosphere	VQRITHVLREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAIEELLRSTELFEKDTG
Ga0207706_105808413	3300025933	Corn Rhizosphere	TVKPNVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTELFEKDAQQGR
Ga0207670_101995904	3300025936	Switchgrass Rhizosphere	VHSNAKFVQRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG
Ga0207670_112652623	3300025936	Switchgrass Rhizosphere	QDSVRQLNAGRKPGAGGNAEFVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR
Ga0207704_117870261	3300025938	Miscanthus Rhizosphere	SNAKFVQRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG
Ga0207679_116034912	3300025945	Corn Rhizosphere	GNAEFIQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMLAVLQRGVKKEAEAIEELLRSTELFEKDASQDS
Ga0207640_114603392	3300025981	Corn Rhizosphere	QRITHILREPLGPLLLGLEVLLREETLSPQGVEMIGLLQRGVKKEADAVEELLRSTELFEKDAG
Ga0207677_103337392	3300026023	Miscanthus Rhizosphere	VRQLNAGRKPGAGGNAEFVQRITHVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTDLFEKEPPR
Ga0209179_10169542	3300027512	Vadose Zone Soil	LNAGVEPTVAGNAEFIQRITHLLRDPLAPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDAAQNR
Ga0247821_109114353	3300028596	Soil	HVLREPLGPLLLGLEVLLREESLSPRGVEMIGLLQRGVKKEADAIEELLRSTELFEKDAT
Ga0307295_100661981	3300028708	Soil	NAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGGEMIGLLQRGVKKEADAIEELLRSTELFEKDAAK
Ga0307312_107668991	3300028828	Soil	LLREPLGPLLLGLEVLLREEPLSPRGSEMIEVLQRGVEKEAQAIEELLRSTELFEKDAAR
Ga0170824_1031801392	3300031231	Forest Soil	VECFFDNVIIEAAAGNAEFVHRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARAIEELLRSTDLFEKDAVQRT
Ga0170824_1172275562	3300031231	Forest Soil	QRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKDAAR
Ga0170824_1234031901	3300031231	Forest Soil	MNATVKPSVPGNAEFVQRITHLLREPLGPMLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKNAAQDR
Ga0170819_165720201	3300031469	Forest Soil	EFVQRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVLQRGVKKEARALEELLRSTELFEKDAAQNR
Ga0170818_1051165042	3300031474	Forest Soil	VECFFDNVIIEAAAGNAEFVHRITHLLREPLGPLLLGLEVLLREEALSPRGVEMIGVIQRGVKKEARAIEELLRSTDLFEKDAVQRT
Ga0170818_1123768113	3300031474	Forest Soil	MNATVKPSVPGNAEFVQRITHLLREPLGPLLLGLEVLLREESLSPRGVEMIGLLHRGVKKEADAIEELLRSTELFEKNAAQDR
Ga0306926_128924391	3300031954	Soil	VQRITHLLREPLGPLLLGLEVLLREETLSDRGVEMIGVLQRGVKKEAQAIEELLRSTELFEKDATQN
Ga0310890_105197661	3300032075	Soil	ARLKPNVTGNAEFVQRITHLLREPLGPLLLGLDVLLHEEFLSPRGVEMIGVLQRGVQKEAQAIEELLRSTELFEKGATQNR
Ga0310914_114955341	3300033289	Soil	AEFVQRITHLLREPLGPLLFGLEVLLREETLSPRGVEMIGVLQRGVKKEAHAIEELLRSTELFEKDAAQNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences