Metagenome / Metatranscriptome Family F069395

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069395
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	91 residues
Representative Sequence	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLFSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSK
Number of Associated Samples	114
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	90.32 %
% of genes from short scaffolds (< 2000 bps)	81.45 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.129 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.613 % of family members)
Environment Ontology (ENVO)	Unclassified (40.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.161 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF08281	Sigma70_r4_2	94.35
PF07883	Cupin_2	1.61
PF03279	Lip_A_acyltrans	1.61
PF01266	DAO	0.81
PF14257	DUF4349	0.81
PF07681	DoxX	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	1.61
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	1.61
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.81
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.68 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.68 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.84 %
Unclassified	root	N/A	8.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	79.84 %
Unclassified	root	N/A	8.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.84 %
Unclassified	root	N/A	8.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002077\|JGI24744J21845_10046215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300005176\|Ga0066679_10320849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1010	Open in IMG/M
3300005178\|Ga0066688_10814123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005329\|Ga0070683_101189761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300005330\|Ga0070690_100801228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300005338\|Ga0068868_100115344	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005338\|Ga0068868_102363611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005364\|Ga0070673_101797484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300005406\|Ga0070703_10096109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300005441\|Ga0070700_100571672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300005444\|Ga0070694_100100592	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300005455\|Ga0070663_101061016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005536\|Ga0070697_101406880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300005539\|Ga0068853_100528763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1115	Open in IMG/M
3300005544\|Ga0070686_100131300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1732	Open in IMG/M
3300005545\|Ga0070695_100048179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2724	Open in IMG/M
3300005546\|Ga0070696_101803879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005548\|Ga0070665_100868726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300005554\|Ga0066661_10705918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300005558\|Ga0066698_10607794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300005559\|Ga0066700_10781575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300005586\|Ga0066691_10317971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300006163\|Ga0070715_10172225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300006173\|Ga0070716_100608685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300006575\|Ga0074053_11916411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300006579\|Ga0074054_12171924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300007255\|Ga0099791_10283401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300009088\|Ga0099830_10835375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300009090\|Ga0099827_10267303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1441	Open in IMG/M
3300009101\|Ga0105247_10321797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300009101\|Ga0105247_10493635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300009137\|Ga0066709_102894834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009137\|Ga0066709_104304710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300009143\|Ga0099792_11041264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300009545\|Ga0105237_10105436	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300009811\|Ga0105084_1105279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010373\|Ga0134128_10115909	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300010401\|Ga0134121_11079988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300011107\|Ga0151490_1626509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300011999\|Ga0120148_1007134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2943	Open in IMG/M
3300012011\|Ga0120152_1001246	All Organisms → cellular organisms → Bacteria	13017	Open in IMG/M
3300012014\|Ga0120159_1000799	All Organisms → cellular organisms → Bacteria	17968	Open in IMG/M
3300012198\|Ga0137364_11047449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012200\|Ga0137382_10887369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300012203\|Ga0137399_10225893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1528	Open in IMG/M
3300012207\|Ga0137381_11307271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300012208\|Ga0137376_11727122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012355\|Ga0137369_10975385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300012357\|Ga0137384_11033538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300012358\|Ga0137368_10075551	All Organisms → cellular organisms → Bacteria	2709	Open in IMG/M
3300012685\|Ga0137397_11012969	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012918\|Ga0137396_11193260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300012925\|Ga0137419_10989843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300012927\|Ga0137416_10251376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1444	Open in IMG/M
3300012930\|Ga0137407_11260543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300012930\|Ga0137407_11839407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012938\|Ga0162651_100086854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012944\|Ga0137410_11778078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300012955\|Ga0164298_10598742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300012960\|Ga0164301_10122268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1540	Open in IMG/M
3300012960\|Ga0164301_11077732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300012986\|Ga0164304_11031049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300014326\|Ga0157380_12652100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300014829\|Ga0120104_1007621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1899	Open in IMG/M
3300014968\|Ga0157379_11511948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300018028\|Ga0184608_10396943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300018061\|Ga0184619_10306206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300018433\|Ga0066667_10665788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300019255\|Ga0184643_1370286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300019867\|Ga0193704_1060586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300019869\|Ga0193705_1064100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300019875\|Ga0193701_1072930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300019882\|Ga0193713_1188580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300020015\|Ga0193734_1089799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300020059\|Ga0193745_1115282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300021073\|Ga0210378_10033932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2032	Open in IMG/M
3300021078\|Ga0210381_10194965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300021080\|Ga0210382_10021289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2345	Open in IMG/M
3300025914\|Ga0207671_10837649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300025916\|Ga0207663_11058427	Not Available	652	Open in IMG/M
3300025936\|Ga0207670_10892556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300025941\|Ga0207711_11991939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300025942\|Ga0207689_11114788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300025949\|Ga0207667_10747066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300025960\|Ga0207651_11460176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300026035\|Ga0207703_10305340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1453	Open in IMG/M
3300026075\|Ga0207708_10843810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300026088\|Ga0207641_10992426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300027846\|Ga0209180_10560898	Not Available	635	Open in IMG/M
3300028381\|Ga0268264_10996850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300028536\|Ga0137415_10187466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1892	Open in IMG/M
3300028704\|Ga0307321_1043999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300028707\|Ga0307291_1077665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	816	Open in IMG/M
3300028714\|Ga0307309_10046314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300028716\|Ga0307311_10009113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2324	Open in IMG/M
3300028718\|Ga0307307_10116450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300028720\|Ga0307317_10199736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300028784\|Ga0307282_10237524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300028787\|Ga0307323_10146568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300028791\|Ga0307290_10075578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300028791\|Ga0307290_10186120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300028793\|Ga0307299_10135573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300028799\|Ga0307284_10301830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300028807\|Ga0307305_10203614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300028824\|Ga0307310_10160693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300028824\|Ga0307310_10167565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300028824\|Ga0307310_10702825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300028880\|Ga0307300_10005794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3112	Open in IMG/M
3300028881\|Ga0307277_10534598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300028884\|Ga0307308_10003041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6996	Open in IMG/M
3300028884\|Ga0307308_10654843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300031720\|Ga0307469_12397620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031740\|Ga0307468_100301754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1163	Open in IMG/M
3300032174\|Ga0307470_11201082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300032205\|Ga0307472_102533026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.87%
Host-Associated	Host-Associated	16.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.03%
Plants	Host-Associated → Plants	16.13%
Aquatic	Environmental → Aquatic	4.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.26%
Freshwater	Environmental → Aquatic → Freshwater	3.23%
Sediment	Environmental → Aquatic → Sediment	1.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.32%
Loam	Environmental → Terrestrial → Soil → Loam	12.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24744J21845_100462151	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNHALVQ
Ga0066679_103208493	3300005176	Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRKLQDLLLTFSWRRSLLVLAPVCALALVSAAVIHGVVHS
Ga0066688_108141231	3300005178	Soil	MPASETVDFEREFEELVRELRALPTEAPDAVRERVRALGEPAAASQPWDRLRGLSLRRSLFVLAPACVVALVSAAVIHGIVNSGPKRVAVATVHWGASGAASKAQDQRL
Ga0070683_1011897612	3300005329	Corn Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPAAVREQVRALGEPARPRTLHDLLLMLSWRRSLLVLAPVCALGFVSAAVIHGVLNSGSPQPVAV
Ga0070690_1008012281	3300005330	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQN
Ga0068868_1001153441	3300005338	Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEPVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVNSGG
Ga0068868_1023636112	3300005338	Miscanthus Rhizosphere	MPATDTIDFEREFSDLVAELRTLPTAAPTPLRRRVRALGEPAQPATAWDRLSGFQWRRSLLVLAP
Ga0070673_1017974842	3300005364	Switchgrass Rhizosphere	MPATDVDFEREFEALVRDLRALPTAAPDQVREQVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNS
Ga0070703_100961091	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQALV
Ga0070700_1005716723	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDTIDFEREFSDLVAELRALPTAAPTPLRKRVRALGEPAQPATAWDRLSGFQWRRSLLVLAP
Ga0070694_1001005921	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNHAL
Ga0070663_1010610161	3300005455	Corn Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQALVQQTSGSGGTADTKG
Ga0070697_1014068802	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSATNVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPARPRTLHDLLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGG
Ga0068853_1005287631	3300005539	Corn Rhizosphere	MPATDVDFEREFEALVRDLRALPTAAPDQVREQVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSG
Ga0070686_1001313001	3300005544	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGRSQNQAMV
Ga0070695_1000481791	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVL
Ga0070696_1018038792	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPATVRERVRALGEPARPRTLHDLLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVKSGGDSGQTAATAQKGT
Ga0070665_1008687262	3300005548	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGRSQNQA
Ga0066661_107059181	3300005554	Soil	MPATDVDFEREFEELVRDLRALPTAAPEHVREHVRALGEPPRPRTLHDLLLFLSWRRSLLVLAPVCLLALVSAAVIHGVLNSGPGSHP
Ga0066698_106077941	3300005558	Soil	MPAIDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQIAAAGRLDTQV
Ga0066700_107815751	3300005559	Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRALGEPERARRLQDLLLTFSWRRSVLVLAPVCVLALVSAAVIHGVLN
Ga0066691_103179711	3300005586	Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRKLQDLLLTFSWRRSVLVLAPVCVLALVSAAVIHGVLNSGPGSHPTAATP
Ga0070715_101722251	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEHEFEELVRELRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGL
Ga0070716_1006086851	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQALVQQTSGSGG
Ga0074053_119164112	3300006575	Soil	MPATDVDFEREFEELVRDLRALPTAAPERVREHVRLLGEPARTRTLRDVLPALSLRRSLLVLAPV
Ga0074054_121719242	3300006579	Soil	MPATDVDFEHEFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHG
Ga0074062_129240351	3300006606	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVNSGGPQSQALVQRTSGSGGAADTKGSKLEL
Ga0066660_113774212	3300006800	Soil	MPATDTIDFEREFEELVRELRALPAAAPDQLRERVRALGEPAAPSQPWDRLRG
Ga0099791_102834011	3300007255	Vadose Zone Soil	MPAIDTDFEREFEELVRDLRALPTAAPQQVRENVRALGEPARPRTLHDLPLIFSWRRSLLVLAPVCVLA
Ga0099830_108353752	3300009088	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPRHVREQVRALGEPTRPRTLHDLLLTFSWRRSLLVLAPVCVLGLVSAAVIHGVV
Ga0099827_102673034	3300009090	Vadose Zone Soil	MPTTDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVI
Ga0105247_103217971	3300009101	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGL
Ga0105247_104936351	3300009101	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPAAVREQVRALGEPARPRTLHDLLLMLSWRRSLLVLAPVCALGL
Ga0066709_1028948341	3300009137	Grasslands Soil	MSATETFDFEREFEGLVRELRALPTAAPEGLRERVRGLGEPAPAPQLFDRVRALSVRRSLLVLAPVCVLGLVVAAVIH
Ga0066709_1043047101	3300009137	Grasslands Soil	MPATDVDFEREFEELVRDLRALPTAAPGSVREHVRALGEPTRPRTLHDLLLMFSWRRSLLVLAPVCVLGLVSAAVIHGVVTSGDNVKQTASAGQKLD
Ga0099792_110412641	3300009143	Vadose Zone Soil	MPATDVDFDREFEELVRDLRALPTAVPQHVREHVRALGEPERPRTLQDLLLMFSWRRSLLVLAPACVLALVSAAVIHGVINSGPGSHPTAAAQKLDSGARHSRSSGTATTPVFGATT
Ga0105237_101054366	3300009545	Corn Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSFLVLAPVCVLGLVSAALIHGLVNSGG
Ga0105084_11052792	3300009811	Groundwater Sand	MPATDTTDFEREFEELVRDLRALPTAASEHVREQVRALGEPAPSRTLWARLPRLHWRRSLLVLAPACV
Ga0126304_104283293	3300010037	Serpentine Soil	MPATDTIDFEHEFSDLVAELRALPAAAPAPLRERVRALGEPAQPDTLWDRVRGIAWRRSLLLLAPVCVV
Ga0134128_101159091	3300010373	Terrestrial Soil	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQPLVQQTSGSG
Ga0134121_110799881	3300010401	Terrestrial Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQVLVQQTSGS
Ga0151490_16265091	3300011107	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRYLLVLAPVCVLGLVSAALIHGLVTSGGSQNQ
Ga0120148_10071345	3300011999	Permafrost	MPATDVDFEREFEELVRDLRALPTAAPGGVRERVRALGEPARPRTLHDLLLTFSWRRSLLVLAPVCVLGLVSAAVIHGVAXXXXXX
Ga0120152_100124614	3300012011	Permafrost	MPATDVDFEREFEELVRDLRALPTAAPGGVRERVRALGEPTRPRTLHDLLLTFSWRRSLLVLAPVCVLGLVSAAVIH
Ga0120159_10007992	3300012014	Permafrost	MPATDVDFEREFEELVRDLRALPTAAPGGVRERVRALGEPARPRTLHDLLLTFSWRRSLLVLAPVCVLGLVSAAVIHGVFHSGGNAKQTAAELRPLRPSVQ*
Ga0137364_110474492	3300012198	Vadose Zone Soil	MSATNVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGSGTTTTPVLGQALP
Ga0137382_108873691	3300012200	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPARPRTLHDLVLVISWRRSLLVLAPVCLLGLVSAAVIHGVIHSGGNVPRTAAA
Ga0137399_102258934	3300012203	Vadose Zone Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDRLLTFSWRRSLLVLAPVCALALLSAAVIHGVLNSGPGAHPTAATEKLDIQTQH
Ga0137381_113072712	3300012207	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAAPGQLDTQVHRGAVEGSGTTTTPVLGQALPQPLAKPWSAV
Ga0137376_117271222	3300012208	Vadose Zone Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPPRLQDLLLTFSWRRSLLVLAPVCALAVVSAAVIHGVLNSGRSTHPTAATQKLDMQTQHGGAV
Ga0137369_109753851	3300012355	Vadose Zone Soil	MPATETMDFEREFEELVRRLRALPTAAPDVVRERVRALDEPAQQPQLWDRLRAVPWRRSLLILAPVCVLGLVTAAVVHG
Ga0137384_110335382	3300012357	Vadose Zone Soil	MPTTDVDFEREFEELVRDLRALPTAAPRHLREQVRALGEPARPRTLHDLLLMFSWRRSLLVLAPVCVLGLVSAAVIHG
Ga0137368_100755515	3300012358	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVRERVRTLGEPARPRTLHDLLLMFSWRRSLLVLAPVCVLGLVSAAVIHGVVTSGGDSKQT
Ga0137397_110129691	3300012685	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVREHVRALGEPARPRTLTDLLLVLSWRRSLLVLAPVCVLALVSAA
Ga0137396_111932601	3300012918	Vadose Zone Soil	MPATNVDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDLLLTFSWRRSLLVLAPVCVLALVSAAVIHGVLNSGRSTIPTAAPQKLDMQTQPGGAVEGGATNDQTWRA
Ga0137419_109898432	3300012925	Vadose Zone Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDLLLTFSWRRSLLVLAPVCALALVSAAVIHGVLNSGRSSHPTAALQKL
Ga0137416_102513761	3300012927	Vadose Zone Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDLLLTFSWRRSLLVLAPVCVLALVSAAVIHGVVHS
Ga0137407_112605431	3300012930	Vadose Zone Soil	MSATDTDFEREFEELVRDLRALPTAAPQHVREHVRALGEPARPRTLHDLPLLFSWRRSLLVLAPVCVLALVSAAVIHGVLNSGPGSHPTAAAQKLDAGAEGSAPAHSGTATTPVFGAATG
Ga0137407_118394071	3300012930	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLFSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSK
Ga0162651_1000868542	3300012938	Soil	MPATDVDFEREFEELVRDLRALPTAARTNVRERVRTLGEPERPRTLHDLLLTFSWRRSLLVLAPVCVLGLVSAAVIHGVVNSGGDSSQTAVALQQVDANAERAQLDSEGTA
Ga0137410_117780781	3300012944	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPATPRTLHDLVLLISWRRSLLVLAPVCLLGLVSAAVIHGVIHSGGNVPRTAAARQQLDTQV
Ga0164298_105987422	3300012955	Soil	MPATDVDFEREFEELVRDLRALPTAAPSGVRERVRALGEPARTRTVHDLLLTMSSRRSLLVLAPVCVLALVSAAVIHGVLNSGSPQPVA
Ga0164301_101222681	3300012960	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVRQHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVNSSGSQN
Ga0164301_110777322	3300012960	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVREHVRALGEPARPRTLHDLLLTLSLRRSLLVLAPVCVLALVGAAVIHGVVKSGGDSGQTAA
Ga0164304_110310492	3300012986	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVREHVRALGEPARPRTLHDLLLTLSLRRSLLVLAPVCVLALVGAAVIHGVVKSGGDSGQTAATAQKGTPELQRGALDSHATSTT
Ga0134079_106066261	3300014166	Grasslands Soil	MPATDTIDFEREFEELVRELRALPTAAPEDVRHRVRALDEPAPRRRLPTLPWRRSLLVLAPVCALGLVLAAV
Ga0157380_126521002	3300014326	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPASVRERVRALGEPARPRTLHDLLLTFSSRRSLLVLAPVCVL
Ga0120104_10076215	3300014829	Permafrost	MPATDVDFEREFEELVRDLRALPTAAPQPVREHVRALGEPARPRTLNDLLLLFSWRRSLLVLAPVCVLGLVSAAVIHGVVHSGGGNSKQTPVAAQSRDAQVQHGAVGGGGTTTVPAF
Ga0157379_115119482	3300014968	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGRSQNQAMVQQTSGS
Ga0184608_103969431	3300018028	Groundwater Sediment	MPATDVDFEREFEELVRDLRALPTAAPTSVRERVRALGEPARPRTLHDLFLTFSSRRSLLVLAPVCVLALVSAAVIHGVVNSGGNSTQTALSAQKNAAEAQRGA
Ga0184619_103062061	3300018061	Groundwater Sediment	MPATDVDFEREFEELVRDLRALPTAAPQHVRERVRALGEPARPRTLHDLLLMFSWRRSLLVFAPVCVLALVSAAVIHGVVHSGGHSKQAASAAQKLDAHVQRGALEGSGTTTT
Ga0066667_106657882	3300018433	Grasslands Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDLLLTFSWRRSLLVLAPVCALALVSAAVIHGVVHSGGGSHSTAALQKLDAGSHRSAPGNSGTAT
Ga0184643_13702862	3300019255	Groundwater Sediment	MPATDIDFEREFEELVRDLRALSTAAPQQVREHVRALGESQQPQTLHDRLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGSG
Ga0193704_10605862	3300019867	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPVLSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQSQALVQQTSGSGRAADKK
Ga0193704_10672271	3300019867	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVRECVRALGEPARPRTLHDLLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVNSGGDSGQTAAAKQPLDLRAQAEHGGSAGTSTTPVFGALDQPL
Ga0193705_10641001	3300019869	Soil	MPATDVDFEHEFEELVRDLRALPTAAPQHVRERVRALGEPARPRTLHDLLLMFSWRRSLLVFAPVCVLALVSAAVIHGVVHSGGHSKQAASAAQKLDAHVQRDAL
Ga0193701_10729302	3300019875	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPQQPQTLHDRLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGSGTTTTPVLGQALPKPLA
Ga0193713_11885802	3300019882	Soil	MPATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPAQPRTLHDLLLLFSWRRSLLVLAPVCMLGLVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGSGTTTTPVLGQAL
Ga0193734_10897991	3300020015	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCAL
Ga0193745_11152821	3300020059	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHG
Ga0210378_100339321	3300021073	Groundwater Sediment	MPATDTMDFEREFQELVRDLRALPTAAPEHVRERVRALGEPAQPLRPWDRVRAVSWRRSLLVLAPVCVLGLVSAAVIHGVLNSGPQREAAATVQS
Ga0210381_101949652	3300021078	Groundwater Sediment	MPATEVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCALGLVSAALIHGLVSSGGSQNQALV
Ga0210382_100212895	3300021080	Groundwater Sediment	MPATDVDFEREFEELVRDLRALPTAAPQQVRERVRALGEPATPRTLHDLVLLISWRRSLLVLAPVCLLGLVSAAVIHGVIHSGGNAPRTAAARQQLDTQVHS
Ga0207671_108376492	3300025914	Corn Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSFLVLAPVRDAVYVSPRPTNTD
Ga0207693_101249441	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDVDFEREFEALVRDLRALPTAAPDQVREQVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGRSQNQAMVQQTSGSGGTADTKG
Ga0207663_110584272	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAATDTDFEREFEELVRDLRALPTAAPRLVREHVRALGEPPRPRTLHDLLLFFSWRRSLLVLAPVCLLALVSAAVIHGVLNSGPGSHPVAAAQKLEGDVHRGA
Ga0207670_108925562	3300025936	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRNVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNHA
Ga0207711_119919391	3300025941	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPAAVREQVRALGEPARPRTLHDLLLMLSWRRSLLVLAPVCALGLVSAAVIHGVLN
Ga0207689_111147881	3300025942	Miscanthus Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVC
Ga0207667_107470661	3300025949	Corn Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVS
Ga0207651_114601762	3300025960	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNHALVQQTSGSGGTAD
Ga0207703_103053404	3300026035	Switchgrass Rhizosphere	MPATDVDFEREFEELVRDLRALPTAAPEQLREHVRLLGEPARTQTLRDVLPALSWRRSLLVLAPVCVL
Ga0207708_108438102	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPATDTIDFEREFSDLVAELRALPTAAPTPLRKRVRALGEPAQPATAWDRLSGFQWRRSLLVL
Ga0207641_109924261	3300026088	Switchgrass Rhizosphere	MPATDVDFEREFEALVRDLRALPTAAPDQVREQVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALI
Ga0209805_13907421	3300026542	Soil	MSATETFDFEHEFGELVWELRALPTAAPERLHERVRALGEPAQPPRLFDRVRVVSLRRSLLVLAPACV
Ga0209180_105608982	3300027846	Vadose Zone Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVREHVRALGEPPRPRTLHDLLLFLSWRRSLLVLAPVCLLALVSAAVIHGVLNSGPGSHPSGAAQKLDAGAQRGAHEGSGTATTPVFG
Ga0268264_109968501	3300028381	Switchgrass Rhizosphere	MPATDVDFEREFEALVRDLRALPTAAPDQVREQVRLLGEPARTRTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVNSGGSQNQA
Ga0137415_101874661	3300028536	Vadose Zone Soil	MPATDIDFEREFEELVRDLRALPTAAPQHVREHVRELGEPERPRRLQDLLLTFSWRRSLLVLAPVCVLALVSAAVIHGVVHSGGGSHSTAALQKLDAGAHRSAPGKSGTAT
Ga0307321_10439991	3300028704	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCALGLVSAALIHGLVSS
Ga0307276_101960992	3300028705	Soil	MPATDVDFEREFEELVRDLRALPTAAPAGVREHVRALGEPARPRTLHDLLLTLSLRRSLLVLAPVCVLALVSAAVIHGVVNLGGDSKQTASAKQPLDLRAQAEHSGAVGTSTTPVFGALNKPLA
Ga0307291_10776651	3300028707	Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVRERVRALGEPARPRTLHDLLLMFSWRRSLLVFAPVCVLALVSAAVIHGVVHSGGHSKQAASAAQKLDAHVQRG
Ga0307303_100677201	3300028713	Soil	MPATDVDFEREFEELVRDLRALPTAAPAGVREHVRALGEPARPRTLHDLLLTLSLRRSLLALAPV
Ga0307309_100463143	3300028714	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVREHVRALGEPARPRTLNDLLLTLSSRRSLLVLAPVCVLALVSAAVI
Ga0307311_100091135	3300028716	Soil	MPATEVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCALGLVSAALIHGLVSSGGSQNQALVQQTSG
Ga0307307_101164501	3300028718	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPQQPQTLHDLLLLVSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGDSKQTAAAGQ
Ga0307317_101997361	3300028720	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVRERVRALGEPARPRTLHDLLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVSSGGDSRPTAATTQKSTAEVQRG
Ga0307282_102375242	3300028784	Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSWRRSLLVLAPVCALGLVSAALIHGLVSSGGSQNQALVQQTSGSGGTAD
Ga0307323_101465681	3300028787	Soil	MPATDVDFEREFEELVRDLRALPTAAPTGVREHVRALGEPARPRTLNDLLLTLSSRRSLLVLAPVCVLALVSAAVIHGLVNSGGDSGQTAAAVQKSAGEDQRGALDSHATATTPFGAVAG
Ga0307290_100755783	3300028791	Soil	MPATDVDFEREFEELVRDLRALPTAAPAGVRERVRAFGEPAQPRTLYDVLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVNSGGNSKQTAASAQKL
Ga0307290_101861202	3300028791	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPQQPQTLHDRLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAA
Ga0307299_101355733	3300028793	Soil	MPATDVDFEREFEELVSDLRALPTAAPTGVRERVRALGEPPRPRTLYDLLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVNS
Ga0307284_103018302	3300028799	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPQQPQTLHDRLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGS
Ga0307305_102036141	3300028807	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPEQPRTLHDRLLLLSWRRSLLVLAPVCVLALVSAAVIHGVIHSGGNSKQTAAAGQLDTQVHRGAVEGSGTT
Ga0307310_101606931	3300028824	Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVRERVRALGEPARPRTLHDLLLMFSWRRSLLVFAPVCVLALVSAAVI
Ga0307310_101675653	3300028824	Soil	MRATDVDFEREFEELVRDLRALPTAAPQQVREHVRALGEPQQPQTLHDRLLLLSWRRSLLVLAPVCVLGLVSAAVIHGVIHSGGDSK
Ga0307310_107028251	3300028824	Soil	MPATDTIDFEREFEGLVRELRALPAAAPEHLREQVRALGEPSQPARLWDRLVGFPWRRSLLVLAPVCVLGLVSAAVVHGLLNSGTPTAAVATVQQGEVAGSGAAAGQQHLEAQRDKA
Ga0307300_100057941	3300028880	Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVRERVRALGEPARPQTLHDLLLMFSWRRSLFVLAPVCVLALVSAAVIHGVVHSGGHSKQAASAAQKLDAHVQRGALEGSG
Ga0307277_105345981	3300028881	Soil	MPATDTIDFEREFEGLVRELRALPAAAPEHLREQVRALGEPSQPARLWDRLVGFPWRRSLLVLAPVCVLGLVSA
Ga0307308_100030411	3300028884	Soil	MPATDVDFEREFEELVRDLRALPTAAPQHVRERVRALGEPARPRTLHDLLLMFSWRRSLLVFPPVCVLALVSAAVIHGVVHSGGHSKQA
Ga0307308_106548432	3300028884	Soil	MPATDVDFEREFEELVRDLRALPTAAPAGVRERVRALGEPAQPRTLYDVLLTLSSRRSLLVLAPVCVLALVSAAVIHGVVNSGGDSEQT
Ga0307469_123976201	3300031720	Hardwood Forest Soil	MPATDVDFEREFEELVRDLRALPTAAPADVRERVRALGEPARPRTLHDLLLTFSSRRSLLVLAPVCVLALVSAAVIHGVVNSGGDSRQSAATVQKSAAELQRGTFDSHATATT
Ga0307468_1003017543	3300031740	Hardwood Forest Soil	MPATDVDFEREFEELVRDLRALPTAAPEPVREHVRLLGEPARARTLRDMLPALSLRRSLLVLAPVCVLGLVSAALIHGLVTSGGPQNQALVQQT
Ga0307470_112010821	3300032174	Hardwood Forest Soil	MPATDVDFEREFEELVRDLRALPTAAPEQVREHVRLLGEPARARTLRDVLPALSLRRSLLVLAPVCVLGLVSAALIHGLVTSGGPQNQALVQQTSGGGGS
Ga0307472_1025330262	3300032205	Hardwood Forest Soil	MPATDVDFEREFEELVRDLRALPTAAPEPVREHVRMLGEPARARTLRDVLPALSWRRSLLVLAPVCVLGLVSAALIHGLVTSGGPQNQALVQRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069395

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences