Basic Information | |
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Family ID | F069334 |
Family Type | Metagenome |
Number of Sequences | 124 |
Average Sequence Length | 44 residues |
Representative Sequence | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSED |
Number of Associated Samples | 96 |
Number of Associated Scaffolds | 124 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 77.42 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 91.13 % |
Associated GOLD sequencing projects | 89 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (56.452 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (52.419 % of family members) |
Environment Ontology (ENVO) | Unclassified (95.161 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (83.065 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Oceanic Marine Seawater Marine Marine Sackhole Brine Marine Seawater Marine Marine Diffuse Hydrothermal Fluid Diffuse Hydrothermal Fluids Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPaug08P261000mDRAFT_10347554 | 3300000157 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITHRMMDDPDGPMTEDETT |
LPjun09P16500mDRAFT_10147791 | 3300000179 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDP |
LPjun09P161000mDRAFT_10138034 | 3300000190 | Marine | MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPDGPMTEDQLTNVLIGLSELHDI |
JGI26060J43896_101337241 | 3300002913 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERHYEDPDGPMSSDELS |
Ga0066826_101893191 | 3300005424 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDDPLWLMTQAEMGNLLTGLSELHETR |
Ga0066864_100536951 | 3300005520 | Marine | MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIG |
Ga0066834_101595551 | 3300005596 | Marine | MTQKYDRINLEEEIMNVWQTRDDLDAITERILDDPNGPMTEDEIGN |
Ga0066834_102111461 | 3300005596 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAITERILDDPNGPMTEDEIG |
Ga0066369_101888185 | 3300005969 | Marine | MKYDRFNLEEEIQNVWQTKEDLDAIAERLHDDPDDP |
Ga0066369_101954862 | 3300005969 | Marine | MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDEIGNVL |
Ga0066375_101019991 | 3300006019 | Marine | MYDRFNLEEEIQNVWHTKEDLDAIAERVYDDPDGPMTEDEIGNVL |
Ga0081592_12383491 | 3300006076 | Diffuse Hydrothermal Fluids | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDEITNVLIGLSE |
Ga0081594_12507211 | 3300006077 | Diffuse Hydrothermal Fluid | MAQQYDRFNLEEEIQNVWHTKDDLNAIAERVYDDPDGPMTEDEIGN |
Ga0075443_101251711 | 3300006165 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSED |
Ga0068504_11883021 | 3300006304 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLELITSRMMDDPDPMTEDDITNV |
Ga0068504_13420013 | 3300006304 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPAPMSEDDIANVLI |
Ga0068470_10960711 | 3300006308 | Marine | MGQEYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPDPMS |
Ga0068471_15132831 | 3300006310 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQLITSRMMDDPDGPMTEDELTN |
Ga0068472_109506303 | 3300006313 | Marine | MTQEYDRFNLEAEILNVWQTKDDLDAIAERVCDDPDGPL |
Ga0068503_102804371 | 3300006340 | Marine | MTQQYDRFNLEEEIQNIWQTKDDLDAIAERLIDGPNGPMSEDEIGNLLVGLSEL |
Ga0068503_104387852 | 3300006340 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITRRMMDDPDGPMTEDELTNVL |
Ga0068503_105496161 | 3300006340 | Marine | MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMSEDDITNVLIGLSEL |
Ga0068503_106522581 | 3300006340 | Marine | MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMTEDDITNVLI |
Ga0068493_112211931 | 3300006341 | Marine | MNYDRFNLEEEIQNVWQTKDDLNAITERIYDDPDGPMTEDEISNVLIG |
Ga0099696_11280001 | 3300006346 | Marine | MTQKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPLTE |
Ga0099697_12682011 | 3300006347 | Marine | MTQKYDRFNLESEIMHVWNTKDDLESITSRMMDDPDPMSEDDIANVL |
Ga0099697_14009311 | 3300006347 | Marine | MTDKKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPMTEDELTNVLIGLS |
Ga0099957_13174902 | 3300006414 | Marine | MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMTEDDITNV |
Ga0098035_10653535 | 3300006738 | Marine | MTQKYDRFNLEEEIMNVWQTRNDLDAVTERIIDDPDGPM |
Ga0098035_11059911 | 3300006738 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTKRILDDPKGPMTEDEIGNVLIGLS |
Ga0066376_105372821 | 3300006900 | Marine | MSQQYNRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDQIGNVLIGL |
Ga0066372_106381012 | 3300006902 | Marine | MTQKYDRFNLEAEIMCVWNTKDDLESITHRMMDDPAGP |
Ga0098034_11260943 | 3300006927 | Marine | MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGN |
Ga0098034_11713731 | 3300006927 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGN |
Ga0114898_12092084 | 3300008216 | Deep Ocean | MTQQYDRFNLEEEIQNIWQTKDDLDAIAERLIDGPNG |
Ga0117902_17940261 | 3300009104 | Marine | MTYKYDRFNLEEEIMYVWQTKKDLDAVIERIIDDPDGPMTEDELAN |
Ga0114995_100524806 | 3300009172 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTE |
Ga0114995_101869873 | 3300009172 | Marine | MTEKKYEIFDLEAEIMSVWSTKDDLESITYRLMDDPDGPLTEDEI |
Ga0114995_102685663 | 3300009172 | Marine | MIEKKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIA |
Ga0114995_104211821 | 3300009172 | Marine | MTDKKYDGFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPMTEDEIA |
Ga0114996_100641917 | 3300009173 | Marine | MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTE |
Ga0114996_107529953 | 3300009173 | Marine | MKYDRFNLEEEIQNVWQTKDDLTAITERLYDDPDGPMTED |
Ga0114993_110036912 | 3300009409 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDP |
Ga0114994_100887621 | 3300009420 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLESITYRLMDDPDGPLTEDEIANVLIGLTELHDIRCKKLFNV |
Ga0115003_106655531 | 3300009512 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDPMSEDDIANVL |
Ga0115004_106393042 | 3300009526 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMS |
Ga0105173_10722761 | 3300009622 | Marine Oceanic | MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTED |
Ga0115002_103477401 | 3300009706 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMSADELSNVLI |
Ga0115002_104089981 | 3300009706 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSEDDIANVLIGLTELHDI |
Ga0115002_112243772 | 3300009706 | Marine | MKYDRFNLEEEIQNVWQTKDDLDAITERLYDDPDGPMTEDE |
Ga0115001_107420382 | 3300009785 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIAN |
Ga0098049_10432331 | 3300010149 | Marine | MTKKYELMDLEQAIQTVWQTKDDLDLITSRMMDGPKPM |
Ga0163108_103311514 | 3300012950 | Seawater | MKYDRFNLEEEIMNVWQTRDDLDAVTERIMDDPDGPMTE |
Ga0181371_10275621 | 3300017704 | Marine | MTQKYDRINLEEEIQNVWQTKDDLDAITERILDDPNGPMTEDQMANVLIGLSELHET |
Ga0181419_11395423 | 3300017728 | Seawater | MTQKYDRFNLEAEIMNVWNTKDDLQSITSRMLDDPDPMSEDDIANVLIGLI |
Ga0211680_102792531 | 3300020389 | Marine | MSQKYDRFNLEAEIMNVWNTKDDLQSITSRMMDDPDG |
Ga0211637_102909212 | 3300020398 | Marine | MTQKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDPM |
Ga0211637_103359273 | 3300020398 | Marine | MGQEYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPD |
Ga0211642_102920972 | 3300020449 | Marine | MSATYDRFTLEEEIQNVWHTKDDLDAIAERVCDDPDGPMTEDDL |
Ga0211697_100908295 | 3300020458 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSED |
Ga0206681_103229523 | 3300021443 | Seawater | MKYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMNAD |
Ga0208920_10036271 | 3300025072 | Marine | MTQKYDRINLEEEIQNVWQTKDDLDAITERILDDP |
Ga0208668_10071161 | 3300025078 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNV |
Ga0208668_10397611 | 3300025078 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDP |
Ga0208668_10774912 | 3300025078 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDDPLWLMTQAEMGNVLTGLSELH |
Ga0208553_11110895 | 3300025109 | Marine | MTQKYDRINLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNVLIG |
Ga0208553_11204151 | 3300025109 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAITERILDDPNGPMT |
Ga0209337_11739903 | 3300025168 | Marine | MIEKKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLTEL |
Ga0208470_10474541 | 3300025219 | Deep Ocean | MTQKYDRFNLESEIMHVWNTKDDLESITSRMMDDPD |
Ga0208570_10128746 | 3300025249 | Deep Ocean | MYDRFNLEEEIQNVWHTKEDLDAIAERVYDDPDGPMTEDQIGNLLIGL |
Ga0207894_10201113 | 3300025268 | Deep Ocean | MTQEYDRFNLEAEILNVWQTKDDLDAIAERVYDDPDGPLTEDEI |
Ga0207881_10761771 | 3300025281 | Deep Ocean | MKEITMTQQYDRFDLENEILNVWHTKDDLDVITERFLGAPGGSMTDD |
Ga0209774_10531004 | 3300025584 | Marine | MTQKYDRFNLEAEILSVWNTKDDLQSITSRMMDDPDGPM |
Ga0208750_10921521 | 3300026082 | Marine | MSQYDRMNLEEEIQNVWQTKNDLDAITERIIDDPDG |
Ga0207966_10800772 | 3300026119 | Marine | MKTNYDYFDLETEIQNVWHTKDDLDAITERIYDDPDGPMTEDEIGNVLLGLSELHET |
Ga0208274_10887661 | 3300026188 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNVLIGLSELHE |
Ga0208894_11524811 | 3300026200 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDD |
Ga0207988_11061351 | 3300026206 | Marine | MTRHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEI |
Ga0208131_10366432 | 3300026213 | Marine | MKYDRFNLEEEIQNVWQTKDDLTAITERIYDDPDGPMTEDE |
Ga0208879_10886454 | 3300026253 | Marine | MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDEIGNVLIG |
Ga0208879_12826094 | 3300026253 | Marine | MTQQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMT |
Ga0208522_11186031 | 3300026254 | Marine | MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGP |
Ga0208522_11642801 | 3300026254 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGP |
Ga0208641_11400091 | 3300026268 | Marine | MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPNGPM |
Ga0209384_11087301 | 3300027522 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSEDDIANVLVGLSELHD |
Ga0209554_10635164 | 3300027685 | Marine | MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTE |
Ga0209445_10818505 | 3300027700 | Marine | MTQQYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPDPMTEDDI |
Ga0209815_12054781 | 3300027714 | Marine | MKYDRFDLETGIQNVWQTRDDLESIAERIYDDPTGPMKEDD |
Ga0209192_100988604 | 3300027752 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIG |
Ga0209709_101522581 | 3300027779 | Marine | MEQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMT |
Ga0209502_103224851 | 3300027780 | Marine | MTDKKYDRFNLEAEIMRVWNTKDDLQSITSRMMDDPD |
Ga0209711_100785694 | 3300027788 | Marine | MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPD |
Ga0209091_100392896 | 3300027801 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDPMSEDDIANVLIGLTELHDIRCK |
Ga0209091_103064061 | 3300027801 | Marine | MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLI |
Ga0209091_104131912 | 3300027801 | Marine | MYDRFDLEEEIMNVWHTKDDLDVIAERVYENPEGPMTEDAIVNVLTGLS |
Ga0209302_102857421 | 3300027810 | Marine | MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDGPLT |
Ga0209302_104882431 | 3300027810 | Marine | MTDKKYQPFDLEESIMNVWNTKDDLNAITSRMLDDPDPMS |
Ga0209090_103414072 | 3300027813 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIA |
Ga0209035_103865641 | 3300027827 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAIAERHYEDPDGPMSSDELSNVL |
Ga0209402_1001870312 | 3300027847 | Marine | MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTEL |
Ga0257108_12048553 | 3300028190 | Marine | MTQEYDRFNLEAEILNVWQTKDDLDAIAERVCDDPDGPLTEDEIENVLIGLSELHDIRCK |
Ga0257107_11764281 | 3300028192 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDGPLTEDELTNVLIGLGELHD |
Ga0257110_11241521 | 3300028197 | Marine | MRKQYDRFDLESAIQTVWHTKDDLELITQRMVDDPDPM |
Ga0257111_11849461 | 3300028535 | Marine | MAQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPM |
Ga0308022_10832385 | 3300031142 | Marine | MKKDRFDLEEEIMNIWQTKDDLVAITERHYDDPDGPMTDDELSNVLIGLSELHETRCRR |
Ga0308010_10329521 | 3300031510 | Marine | MKYDRFNLEEEIQNVWHTKDDLNAITERFYDDPDGP |
Ga0307488_100416337 | 3300031519 | Sackhole Brine | MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLT |
Ga0302137_10394311 | 3300031588 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLSELH |
Ga0302135_101772514 | 3300031625 | Marine | MEYDRFNLEAEIMRVWNTKDDLESITSRMMDDPDGPMSED |
Ga0308001_101493673 | 3300031644 | Marine | MTEKKYEPFDLEESIMNVWNTKDDLNAITSRMLDDPDPMSED |
Ga0308012_102062084 | 3300031647 | Marine | MIYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMT |
Ga0302139_100937391 | 3300031693 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDD |
Ga0308016_1001903011 | 3300031695 | Marine | MKYDRFNLEEEIQNVWHTKDDLNAITERLYDDPDGPMTQ |
Ga0308016_100410831 | 3300031695 | Marine | MIYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMTADELS |
Ga0308016_101975411 | 3300031695 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPD |
Ga0315328_102436512 | 3300031757 | Seawater | MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPNG |
Ga0310122_101691363 | 3300031800 | Marine | MTKQYDRFNLETEIQNVWQTKDDLDAIAERIYDDPDGPMTE |
Ga0310121_104174461 | 3300031801 | Marine | MKYDRFNLEEEIQNVWQTKDDLNAITERVYDDPSGPMTE |
Ga0310120_102054303 | 3300031803 | Marine | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDEIAN |
Ga0310120_105905951 | 3300031803 | Marine | MTQKYDRFNLEEEIQNVWQTKDDLNAITERIYDDPDGPMTED |
Ga0315316_112402781 | 3300032011 | Seawater | MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPDGPMTEDQLTNVLIGLSELHD |
Ga0315329_100703981 | 3300032048 | Seawater | MTQKYDRFNLEEQIQNVWQTKDDLNAITERIYDDPDGPMT |
Ga0310345_105873371 | 3300032278 | Seawater | MKMYYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMNADELSNV |
Ga0310345_124499891 | 3300032278 | Seawater | MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLSE |
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