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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F069304 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 124 |
| Average Sequence Length | 68 residues |
| Representative Sequence | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Number of Associated Samples | 110 |
| Number of Associated Scaffolds | 124 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 68.55 % |
| % of genes near scaffold ends (potentially truncated) | 37.10 % |
| % of genes from short scaffolds (< 2000 bps) | 83.87 % |
| Associated GOLD sequencing projects | 101 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (62.097 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.161 % of family members) |
| Environment Ontology (ENVO) | Unclassified (33.065 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (41.935 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 36.23% β-sheet: 18.84% Coil/Unstructured: 44.93% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 124 Family Scaffolds |
|---|---|---|
| PF00156 | Pribosyltran | 25.81 |
| PF03259 | Robl_LC7 | 14.52 |
| PF03631 | Virul_fac_BrkB | 8.87 |
| PF00216 | Bac_DNA_binding | 8.06 |
| PF00027 | cNMP_binding | 3.23 |
| PF00929 | RNase_T | 1.61 |
| PF02151 | UVR | 1.61 |
| PF01541 | GIY-YIG | 0.81 |
| PF01725 | Ham1p_like | 0.81 |
| PF03725 | RNase_PH_C | 0.81 |
| COG ID | Name | Functional Category | % Frequency in 124 Family Scaffolds |
|---|---|---|---|
| COG2018 | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family | Signal transduction mechanisms [T] | 14.52 |
| COG1295 | Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase) | Function unknown [S] | 8.87 |
| COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 8.06 |
| COG0127 | Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family | Nucleotide transport and metabolism [F] | 0.81 |
| COG0689 | Ribonuclease PH | Translation, ribosomal structure and biogenesis [J] | 0.81 |
| COG1185 | Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) | Translation, ribosomal structure and biogenesis [J] | 0.81 |
| COG2123 | Exosome complex RNA-binding protein Rrp42, RNase PH superfamily | Intracellular trafficking, secretion, and vesicular transport [U] | 0.81 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 62.10 % |
| All Organisms | root | All Organisms | 37.90 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000956|JGI10216J12902_100750158 | Not Available | 1445 | Open in IMG/M |
| 3300002568|C688J35102_118806898 | Not Available | 599 | Open in IMG/M |
| 3300002568|C688J35102_120970244 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3703 | Open in IMG/M |
| 3300003267|soilL1_10013089 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 12072 | Open in IMG/M |
| 3300003987|Ga0055471_10080672 | Not Available | 930 | Open in IMG/M |
| 3300003996|Ga0055467_10094097 | Not Available | 844 | Open in IMG/M |
| 3300004114|Ga0062593_100024062 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei | 3307 | Open in IMG/M |
| 3300004114|Ga0062593_100045003 | All Organisms → cellular organisms → Bacteria | 2689 | Open in IMG/M |
| 3300004114|Ga0062593_100472137 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1152 | Open in IMG/M |
| 3300004114|Ga0062593_101051971 | Not Available | 840 | Open in IMG/M |
| 3300004114|Ga0062593_102089139 | Not Available | 632 | Open in IMG/M |
| 3300004153|Ga0063455_101314028 | Not Available | 552 | Open in IMG/M |
| 3300004156|Ga0062589_102472466 | Not Available | 537 | Open in IMG/M |
| 3300004157|Ga0062590_100518310 | Not Available | 1022 | Open in IMG/M |
| 3300004157|Ga0062590_101773268 | Not Available | 632 | Open in IMG/M |
| 3300004479|Ga0062595_100085903 | Not Available | 1612 | Open in IMG/M |
| 3300005294|Ga0065705_10574923 | All Organisms → cellular organisms → Bacteria | 723 | Open in IMG/M |
| 3300005331|Ga0070670_100976061 | All Organisms → cellular organisms → Bacteria | 770 | Open in IMG/M |
| 3300005332|Ga0066388_108838466 | Not Available | 500 | Open in IMG/M |
| 3300005336|Ga0070680_101199122 | Not Available | 656 | Open in IMG/M |
| 3300005338|Ga0068868_100183563 | All Organisms → cellular organisms → Bacteria | 1737 | Open in IMG/M |
| 3300005341|Ga0070691_10089769 | All Organisms → cellular organisms → Bacteria | 1514 | Open in IMG/M |
| 3300005343|Ga0070687_100993912 | Not Available | 608 | Open in IMG/M |
| 3300005347|Ga0070668_100776313 | Not Available | 850 | Open in IMG/M |
| 3300005353|Ga0070669_101410086 | Not Available | 605 | Open in IMG/M |
| 3300005364|Ga0070673_101400677 | Not Available | 658 | Open in IMG/M |
| 3300005366|Ga0070659_100654710 | Not Available | 906 | Open in IMG/M |
| 3300005366|Ga0070659_102100268 | Not Available | 508 | Open in IMG/M |
| 3300005444|Ga0070694_100997363 | Not Available | 695 | Open in IMG/M |
| 3300005458|Ga0070681_11260059 | Not Available | 662 | Open in IMG/M |
| 3300005526|Ga0073909_10455819 | Not Available | 612 | Open in IMG/M |
| 3300005547|Ga0070693_100126165 | All Organisms → cellular organisms → Bacteria | 1594 | Open in IMG/M |
| 3300005718|Ga0068866_10846352 | Not Available | 639 | Open in IMG/M |
| 3300005840|Ga0068870_11299566 | Not Available | 530 | Open in IMG/M |
| 3300005842|Ga0068858_100384166 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli | 1348 | Open in IMG/M |
| 3300005874|Ga0075288_1061091 | Not Available | 595 | Open in IMG/M |
| 3300005937|Ga0081455_10127152 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia | 1998 | Open in IMG/M |
| 3300006169|Ga0082029_1739752 | All Organisms → cellular organisms → Bacteria | 2377 | Open in IMG/M |
| 3300009098|Ga0105245_12340718 | Not Available | 588 | Open in IMG/M |
| 3300009545|Ga0105237_11922601 | Not Available | 600 | Open in IMG/M |
| 3300009789|Ga0126307_10000921 | All Organisms → cellular organisms → Bacteria | 19369 | Open in IMG/M |
| 3300010036|Ga0126305_10003632 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 7229 | Open in IMG/M |
| 3300010040|Ga0126308_10010002 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4745 | Open in IMG/M |
| 3300010041|Ga0126312_10094002 | All Organisms → cellular organisms → Bacteria | 2043 | Open in IMG/M |
| 3300010166|Ga0126306_10486166 | All Organisms → cellular organisms → Bacteria | 975 | Open in IMG/M |
| 3300010329|Ga0134111_10510777 | Not Available | 528 | Open in IMG/M |
| 3300010371|Ga0134125_12588453 | Not Available | 552 | Open in IMG/M |
| 3300010396|Ga0134126_11743605 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 683 | Open in IMG/M |
| 3300010399|Ga0134127_10287576 | Not Available | 1577 | Open in IMG/M |
| 3300010403|Ga0134123_13177215 | Not Available | 528 | Open in IMG/M |
| 3300011119|Ga0105246_11413136 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 650 | Open in IMG/M |
| 3300011332|Ga0126317_10636608 | Not Available | 800 | Open in IMG/M |
| 3300012897|Ga0157285_10346400 | Not Available | 520 | Open in IMG/M |
| 3300012899|Ga0157299_10015293 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1374 | Open in IMG/M |
| 3300012899|Ga0157299_10054351 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 909 | Open in IMG/M |
| 3300012902|Ga0157291_10027849 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1190 | Open in IMG/M |
| 3300012904|Ga0157282_10080007 | Not Available | 872 | Open in IMG/M |
| 3300012905|Ga0157296_10016970 | All Organisms → cellular organisms → Bacteria | 1365 | Open in IMG/M |
| 3300012911|Ga0157301_10249708 | Not Available | 623 | Open in IMG/M |
| 3300012913|Ga0157298_10368191 | Not Available | 535 | Open in IMG/M |
| 3300012914|Ga0157297_10005048 | All Organisms → cellular organisms → Bacteria | 2574 | Open in IMG/M |
| 3300013096|Ga0157307_1075452 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 676 | Open in IMG/M |
| 3300013306|Ga0163162_12992205 | Not Available | 543 | Open in IMG/M |
| 3300013308|Ga0157375_13299538 | Not Available | 538 | Open in IMG/M |
| 3300014302|Ga0075310_1094488 | Not Available | 629 | Open in IMG/M |
| 3300015077|Ga0173483_10679896 | Not Available | 578 | Open in IMG/M |
| 3300015371|Ga0132258_12212566 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1380 | Open in IMG/M |
| 3300015371|Ga0132258_12949095 | All Organisms → cellular organisms → Bacteria | 1181 | Open in IMG/M |
| 3300017965|Ga0190266_10004736 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 3021 | Open in IMG/M |
| 3300018051|Ga0184620_10041336 | Not Available | 1260 | Open in IMG/M |
| 3300018061|Ga0184619_10314895 | Not Available | 716 | Open in IMG/M |
| 3300018067|Ga0184611_1251021 | Not Available | 625 | Open in IMG/M |
| 3300018073|Ga0184624_10055073 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1620 | Open in IMG/M |
| 3300018465|Ga0190269_10098997 | Not Available | 1425 | Open in IMG/M |
| 3300018466|Ga0190268_10827726 | Not Available | 706 | Open in IMG/M |
| 3300019356|Ga0173481_10032032 | All Organisms → cellular organisms → Bacteria | 1694 | Open in IMG/M |
| 3300019356|Ga0173481_10036798 | Not Available | 1609 | Open in IMG/M |
| 3300019356|Ga0173481_10066909 | Not Available | 1287 | Open in IMG/M |
| 3300019767|Ga0190267_10066818 | All Organisms → cellular organisms → Bacteria | 1304 | Open in IMG/M |
| 3300021078|Ga0210381_10324246 | Not Available | 559 | Open in IMG/M |
| 3300022898|Ga0247745_1034356 | Not Available | 766 | Open in IMG/M |
| 3300022915|Ga0247790_10209109 | Not Available | 521 | Open in IMG/M |
| 3300023057|Ga0247797_1009853 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1126 | Open in IMG/M |
| 3300023263|Ga0247800_1109345 | Not Available | 567 | Open in IMG/M |
| 3300025791|Ga0210115_1015509 | Not Available | 1757 | Open in IMG/M |
| 3300025899|Ga0207642_10285019 | Not Available | 952 | Open in IMG/M |
| 3300025901|Ga0207688_10007753 | All Organisms → cellular organisms → Bacteria | 5846 | Open in IMG/M |
| 3300025907|Ga0207645_10059505 | All Organisms → cellular organisms → Bacteria | 2440 | Open in IMG/M |
| 3300025908|Ga0207643_10047670 | All Organisms → cellular organisms → Bacteria | 2425 | Open in IMG/M |
| 3300025912|Ga0207707_10883562 | Not Available | 740 | Open in IMG/M |
| 3300025925|Ga0207650_11506022 | Not Available | 572 | Open in IMG/M |
| 3300025932|Ga0207690_10099122 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2077 | Open in IMG/M |
| 3300025932|Ga0207690_11217862 | Not Available | 629 | Open in IMG/M |
| 3300025935|Ga0207709_10783216 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 769 | Open in IMG/M |
| 3300025938|Ga0207704_10653442 | Not Available | 866 | Open in IMG/M |
| 3300025960|Ga0207651_10391082 | All Organisms → cellular organisms → Bacteria | 1181 | Open in IMG/M |
| 3300025961|Ga0207712_11923580 | Not Available | 530 | Open in IMG/M |
| 3300025972|Ga0207668_10721704 | Not Available | 877 | Open in IMG/M |
| 3300028380|Ga0268265_11322964 | Not Available | 721 | Open in IMG/M |
| 3300028381|Ga0268264_10882763 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 897 | Open in IMG/M |
| 3300028589|Ga0247818_11384086 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 507 | Open in IMG/M |
| 3300028744|Ga0307318_10000462 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia | 13218 | Open in IMG/M |
| 3300028787|Ga0307323_10062113 | Not Available | 1323 | Open in IMG/M |
| 3300028811|Ga0307292_10028628 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2004 | Open in IMG/M |
| 3300028812|Ga0247825_11323877 | Not Available | 527 | Open in IMG/M |
| 3300028889|Ga0247827_10259079 | Not Available | 994 | Open in IMG/M |
| 3300030336|Ga0247826_10029259 | All Organisms → cellular organisms → Bacteria | 2790 | Open in IMG/M |
| 3300030336|Ga0247826_11083311 | Not Available | 639 | Open in IMG/M |
| 3300031092|Ga0308204_10181053 | Not Available | 646 | Open in IMG/M |
| 3300031114|Ga0308187_10230934 | Not Available | 663 | Open in IMG/M |
| 3300031184|Ga0307499_10169008 | Not Available | 654 | Open in IMG/M |
| 3300031547|Ga0310887_10424746 | Not Available | 787 | Open in IMG/M |
| 3300031548|Ga0307408_100139438 | Not Available | 1902 | Open in IMG/M |
| 3300031548|Ga0307408_100514369 | Not Available | 1050 | Open in IMG/M |
| 3300031716|Ga0310813_12227264 | Not Available | 519 | Open in IMG/M |
| 3300031731|Ga0307405_11172293 | Not Available | 663 | Open in IMG/M |
| 3300031901|Ga0307406_12152706 | Not Available | 500 | Open in IMG/M |
| 3300031908|Ga0310900_10274364 | Not Available | 1226 | Open in IMG/M |
| 3300031911|Ga0307412_11177692 | Not Available | 685 | Open in IMG/M |
| 3300031944|Ga0310884_10038550 | All Organisms → cellular organisms → Bacteria | 2074 | Open in IMG/M |
| 3300031995|Ga0307409_100936587 | Not Available | 881 | Open in IMG/M |
| 3300032002|Ga0307416_100325639 | All Organisms → cellular organisms → Bacteria | 1541 | Open in IMG/M |
| 3300032005|Ga0307411_10013235 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4542 | Open in IMG/M |
| 3300033550|Ga0247829_11512835 | Not Available | 554 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 20.16% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 7.26% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 7.26% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 6.45% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.65% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.84% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 4.03% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.23% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.23% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.23% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.23% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.42% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.42% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.42% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.42% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.42% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.42% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.61% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.81% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.81% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.81% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.81% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
| Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 0.81% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.81% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.81% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.81% |
| Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.81% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.81% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.81% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.81% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.81% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.81% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.81% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.81% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.81% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
| 3300003987 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 | Environmental | Open in IMG/M |
| 3300003996 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300005874 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 | Environmental | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
| 3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
| 3300010329 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2 | Environmental | Open in IMG/M |
| 3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
| 3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
| 3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300013096 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014302 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 | Environmental | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
| 3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
| 3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300022898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300023057 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6 | Environmental | Open in IMG/M |
| 3300023263 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6 | Environmental | Open in IMG/M |
| 3300025791 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
| 3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
| 3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
| 3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
| 3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
| 3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
| 3300030336 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1 | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
| 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
| 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI10216J12902_1007501582 | 3300000956 | Soil | MRARSVVGVLAGAAAIAGAIVFVRTKAAVDREHVDVYFADGSMVSLEPGSPDGDRLLPLARRALAAARG* |
| C688J35102_1188068982 | 3300002568 | Soil | RRPRRPPVRARSVVGVLAAGAALAGAIVFVRTKSALDREHVDVYYTDGSMISLDTGSADGDRLVPLARRAIAAARG* |
| C688J35102_1209702443 | 3300002568 | Soil | VRARSVVGVLAAGAALAGAIVFVRTKSNLDREHVDVYYADGSMISLDAGSADGDRLLPLARRAIAAARG* |
| soilL1_100130899 | 3300003267 | Sugarcane Root And Bulk Soil | MKARSAVGLLAAGAALAGAIVFVKTKSAVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALAAARG* |
| Ga0055471_100806722 | 3300003987 | Natural And Restored Wetlands | VKARSAVGLLAAGAALAGAIVFVRTKSSAEREHVDVYFADGSMVSLQAGSSDGERLLPLARRALAAARG* |
| Ga0055467_100940971 | 3300003996 | Natural And Restored Wetlands | LLAAGAALAGAIVFVRTKSAAEREHVDVYFADGSMVSLQAGSSDGERLLPLARRALAAARG* |
| Ga0062593_1000240622 | 3300004114 | Soil | VRARSVVGVVAGAAALAGAIIFVRTKASVEHEHVDVYFADGSMVTLDPGSVDGDRLLPLARRAIAAARG* |
| Ga0062593_1000450033 | 3300004114 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSSIEREHVDVYFADGSMVSLEAGSADGDRLLPLARRVLAAARG* |
| Ga0062593_1004721372 | 3300004114 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0062593_1010519712 | 3300004114 | Soil | VQARSALGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSAHGDRLLPLARRALAAARG* |
| Ga0062593_1020891392 | 3300004114 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALAAARG* |
| Ga0063455_1013140282 | 3300004153 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSANGDKLLPLARRALASARG* |
| Ga0062589_1024724661 | 3300004156 | Soil | VQARSALGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSADGDRLLPLARRALAAARG* |
| Ga0062590_1005183101 | 3300004157 | Soil | LGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSADGDRLLPLARRALAAARG* |
| Ga0062590_1017732682 | 3300004157 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEADSADGDRLLPLARRALAAARG* |
| Ga0062595_1000859032 | 3300004479 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0065705_105749232 | 3300005294 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG* |
| Ga0070670_1009760612 | 3300005331 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSIVSLEAGSVDGDRLLPLARRALASARG* |
| Ga0066388_1088384661 | 3300005332 | Tropical Forest Soil | TMKARSAVGLLAAGAALAGAIVFVRTKAAADREHVDVYFADGSMVSLEPGSPDGDRLLPLARRALAAARG* |
| Ga0070680_1011991221 | 3300005336 | Corn Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFGDGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0068868_1001835632 | 3300005338 | Miscanthus Rhizosphere | VKARSTVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0070691_100897691 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | VKARSALGLLAAGAALAGAIVFVRTKSAVEREHVDVYFGDGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0070687_1009939122 | 3300005343 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSVDGDRLLPLARRALASARG* |
| Ga0070668_1007763131 | 3300005347 | Switchgrass Rhizosphere | VGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG* |
| Ga0070669_1014100861 | 3300005353 | Switchgrass Rhizosphere | RRPRKPRVKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0070673_1014006771 | 3300005364 | Switchgrass Rhizosphere | GAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSVDGDRLLPLARRALASARG* |
| Ga0070659_1006547102 | 3300005366 | Corn Rhizosphere | MRARSVVGVLAGAAAIAGAIVFVRTKAIVDREHVDVYFADGSMVSLEPGSPDGDRLLPLARRALAAARG* |
| Ga0070659_1021002681 | 3300005366 | Corn Rhizosphere | MMKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALASARG* |
| Ga0070694_1009973632 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | TMKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG* |
| Ga0070681_112600591 | 3300005458 | Corn Rhizosphere | RQRVKARSAVGLLAAGAALAGAIVFVRTKSSIEREHVDVYFADGSMVSLEAGSADGDRLLPLARRVLAAARG* |
| Ga0073909_104558192 | 3300005526 | Surface Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0070693_1001261653 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | VRARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEAGSPKGDRLLPLARRALAAARG* |
| Ga0068866_108463522 | 3300005718 | Miscanthus Rhizosphere | MKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG* |
| Ga0068870_112995661 | 3300005840 | Miscanthus Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSSIEREHVDVYFADGSMVSLEAGSADGDRLLSLARRVLAAARG* |
| Ga0068858_1003841661 | 3300005842 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASA |
| Ga0075288_10610912 | 3300005874 | Rice Paddy Soil | VRARNVVGVLAAGAALAGAIVFVRTKSALDRDHVDVYYTDGSMISLNPGSADGDRLLPLARRAIAAARG* |
| Ga0081455_101271523 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEAGSSDGDRLLPLARRALAAARG* |
| Ga0082029_17397524 | 3300006169 | Termite Nest | VKARSAVGLLAAGAALAGAIVFVRTKSAAEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0105245_123407182 | 3300009098 | Miscanthus Rhizosphere | AAGAALAGAIVFVRTKSSIEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALAAARG* |
| Ga0105237_119226011 | 3300009545 | Corn Rhizosphere | SAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0126307_1000092127 | 3300009789 | Serpentine Soil | VKARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0126305_100036329 | 3300010036 | Serpentine Soil | VKARSAVGLVAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLGAGSSDGDRLLPLARRALASARG* |
| Ga0126308_100100027 | 3300010040 | Serpentine Soil | VKARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEVGSADGDRLLPLARRALASARG* |
| Ga0126312_100940024 | 3300010041 | Serpentine Soil | VKARSALGLLAAGAALAGAIVFVRTKAQAEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0126306_104861662 | 3300010166 | Serpentine Soil | VKARSAVGLVAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0134111_105107772 | 3300010329 | Grasslands Soil | MRARNVVGVLAGAAALAGAIVFVRTKAAVDREHVDVYFADGSMVSLEPGSADGNRLLPLARRAIAAARG* |
| Ga0134125_125884532 | 3300010371 | Terrestrial Soil | PRRRRPRRPRVKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0134126_117436052 | 3300010396 | Terrestrial Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0134127_102875763 | 3300010399 | Terrestrial Soil | VKARSAVGLLAAGAALAGSIVFVRTKSHVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0134123_131772151 | 3300010403 | Terrestrial Soil | MKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRAL |
| Ga0105246_114131361 | 3300011119 | Miscanthus Rhizosphere | VKARSAVGLLAAGAALTGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASA |
| Ga0126317_106366082 | 3300011332 | Soil | VGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLQAGSADGDRLLPLARRALASARG* |
| Ga0157285_103464002 | 3300012897 | Soil | AGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG* |
| Ga0157299_100152931 | 3300012899 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRA |
| Ga0157299_100543512 | 3300012899 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSVVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0157291_100278493 | 3300012902 | Soil | RRRQRRPKVRARSVVGVVAGAAALAGAIIFVRTKASVEHEHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0157282_100800072 | 3300012904 | Soil | PTVQARSALGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSADGDRLLPLARRALASARG* |
| Ga0157296_100169702 | 3300012905 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQIEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG* |
| Ga0157301_102497081 | 3300012911 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRVLAAARG* |
| Ga0157298_103681911 | 3300012913 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEAGSADGDKLLPL |
| Ga0157297_100050482 | 3300012914 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG* |
| Ga0157307_10754521 | 3300013096 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0163162_129922052 | 3300013306 | Switchgrass Rhizosphere | MKARSAVGRLAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG* |
| Ga0157375_132995381 | 3300013308 | Miscanthus Rhizosphere | GLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0075310_10944881 | 3300014302 | Natural And Restored Wetlands | LAAGAALAGAIVFVRTKSAAEREHVDVYFADGSMVSLEAGSSEGERLLPLARRALAAARG |
| Ga0173483_106798962 | 3300015077 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEPGSAHGDRLLPLARRAIAAARG* |
| Ga0132258_122125663 | 3300015371 | Arabidopsis Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMISLEAGSADGDRLLPLARRALAA |
| Ga0132258_129490951 | 3300015371 | Arabidopsis Rhizosphere | VGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG* |
| Ga0190266_100047364 | 3300017965 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0184620_100413362 | 3300018051 | Groundwater Sediment | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0184619_103148951 | 3300018061 | Groundwater Sediment | ARSAVGLLAAGAALAGAIVFVRTKSQSEREHVDVYFADGSMVSLEGDSAQAARLIPLARDAIRAARA |
| Ga0184611_12510212 | 3300018067 | Groundwater Sediment | VKARSAVGLLAAGAALAGAIVFVRTKSQSEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0184624_100550734 | 3300018073 | Groundwater Sediment | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARR |
| Ga0190269_100989972 | 3300018465 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0190268_108277262 | 3300018466 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0173481_100320321 | 3300019356 | Soil | PRRPRVKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0173481_100367982 | 3300019356 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQIEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0173481_100669093 | 3300019356 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0190267_100668184 | 3300019767 | Soil | ARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0210381_103242462 | 3300021078 | Groundwater Sediment | MRARSALGLLAAGTALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEPGSTDGDRLLPLARRAIAAARG |
| Ga0247745_10343561 | 3300022898 | Soil | AALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASARG |
| Ga0247790_102091092 | 3300022915 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGDRLLPLARRALASARG |
| Ga0247797_10098531 | 3300023057 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDKLLPLARRALASA |
| Ga0247800_11093451 | 3300023263 | Soil | VQARSALGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSADGDRLLPLARRALAAARG |
| Ga0210115_10155092 | 3300025791 | Natural And Restored Wetlands | VKARSAAGLLAAGAALAGAIVFVRTKSSAEREHVDVYFADGSMVSLQAGSSDGERLLPLARRALAAARG |
| Ga0207642_102850192 | 3300025899 | Miscanthus Rhizosphere | MKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG |
| Ga0207688_100077534 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | VKARSTVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0207645_100595054 | 3300025907 | Miscanthus Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSTDGDRLLPLARRALAAARG |
| Ga0207643_100476702 | 3300025908 | Miscanthus Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSVDGDRLLPLARRALASARG |
| Ga0207707_108835622 | 3300025912 | Corn Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSSIEREHVDVYFADGSMVSLEAGSADGDRLLPLARRVLAAARG |
| Ga0207650_115060221 | 3300025925 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSIVSLEAGSVDGDRLLPLARRALASARG |
| Ga0207690_100991225 | 3300025932 | Corn Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDKLLPFARRALASARG |
| Ga0207690_112178622 | 3300025932 | Corn Rhizosphere | MMKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG |
| Ga0207709_107832161 | 3300025935 | Miscanthus Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRL |
| Ga0207704_106534421 | 3300025938 | Miscanthus Rhizosphere | AGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0207651_103910821 | 3300025960 | Switchgrass Rhizosphere | LAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSVDGDRLLPLARRALASARG |
| Ga0207712_119235801 | 3300025961 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0207668_107217041 | 3300025972 | Switchgrass Rhizosphere | TMKARSAVGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG |
| Ga0268265_113229642 | 3300028380 | Switchgrass Rhizosphere | VGILAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPNGDRLLPLARRALAAARG |
| Ga0268264_108827633 | 3300028381 | Switchgrass Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFGDGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0247818_113840862 | 3300028589 | Soil | MKARSAVGMLAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPDGDRLLPLARRALAAARG |
| Ga0307318_100004621 | 3300028744 | Soil | LAAGAALAGAIVFVRTKSQSEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0307323_100621133 | 3300028787 | Soil | MRARSALGLLAAGTALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEPGSTDGDRLLPFA |
| Ga0307292_100286285 | 3300028811 | Soil | VRARSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLEPGSTDGDRLLPLARRAIAAAR |
| Ga0247825_113238772 | 3300028812 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGERLLPLARRALASARG |
| Ga0247827_102590791 | 3300028889 | Soil | RSAVGLLAAGAALAGAIVFVRTKSAVEREHVDVYFADGSMVSLESGSSDGDRLLPLARRALAAARG |
| Ga0247826_100292591 | 3300030336 | Soil | PRVKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGERLLPLARRALASARG |
| Ga0247826_110833111 | 3300030336 | Soil | VKARSTVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0308204_101810531 | 3300031092 | Soil | RPRRPRVKARSAVGLLAAGAALAGAIVFVRTKSQSEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0308187_102309342 | 3300031114 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQSEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0307499_101690082 | 3300031184 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAGGDRLLPLARRALASARG |
| Ga0310887_104247461 | 3300031547 | Soil | KARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0307408_1001394382 | 3300031548 | Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0307408_1005143691 | 3300031548 | Rhizosphere | SAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGERLLPLARRALASARG |
| Ga0310813_122272642 | 3300031716 | Soil | VQARSALGLLAAGAALAGAIVFVRTKAAVEREHVDVYFADGSMVSLEPGSAHGDRLLPLARRALAAARG |
| Ga0307405_111722932 | 3300031731 | Rhizosphere | RPRVKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGERLLPLARRALASARG |
| Ga0307406_121527062 | 3300031901 | Rhizosphere | VKARSAVGLLAVGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGERLLLLARRALASARG |
| Ga0310900_102743642 | 3300031908 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGDRLLRLARRALASARG |
| Ga0307412_111776922 | 3300031911 | Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGERLLPLARRALASARG |
| Ga0310884_100385504 | 3300031944 | Soil | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHFDVYFADGSMVSLEAGSADGDRLLPLARRALASARG |
| Ga0307409_1009365872 | 3300031995 | Rhizosphere | VKARSAVGLLAAGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSADGERLLLLARRALASARG |
| Ga0307416_1003256394 | 3300032002 | Rhizosphere | RRPRVKARSAVGLLAVGAALAGAIVFVRTKSQVEREHVDVYFADGSMVSLEAGSAEGERLLPLARRALASARG |
| Ga0307411_100132357 | 3300032005 | Rhizosphere | LLAAGAALAGAIVFVRTKTQVEREHVDVYFADGSMVSLEAGSADGDRLLPLARRALASAR |
| Ga0247829_115128352 | 3300033550 | Soil | MKARSAVGVLAAGAALAGAIVFVRAKAAVDREHVDVYFADGSMVSLESGSPDGDRLLPLARRALAAARG |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |