NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069289

Metagenome / Metatranscriptome Family F069289

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069289
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 44 residues
Representative Sequence MILLAIAGSTIGAWWRRAILALTHPAPRSKSDVPPEFYRFPIF
Number of Associated Samples 109
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.61 %
% of genes near scaffold ends (potentially truncated) 29.03 %
% of genes from short scaffolds (< 2000 bps) 92.74 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.452 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(26.613 % of family members)
Environment Ontology (ENVO) Unclassified
(34.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.323 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.99%    β-sheet: 0.00%    Coil/Unstructured: 69.01%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF06568DUF1127 56.45
PF00126HTH_1 7.26
PF03466LysR_substrate 5.65
PF00465Fe-ADH 1.61
PF06779MFS_4 0.81
PF00296Bac_luciferase 0.81
PF14681UPRTase 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 56.45
COG03373-dehydroquinate synthetaseAmino acid transport and metabolism [E] 1.61
COG0371Glycerol dehydrogenase or related enzyme, iron-containing ADH familyEnergy production and conversion [C] 1.61
COG1454Alcohol dehydrogenase, class IVEnergy production and conversion [C] 1.61
COG1979Alcohol dehydrogenase YqhD, Fe-dependent ADH familyEnergy production and conversion [C] 1.61
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.45 %
UnclassifiedrootN/A18.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10120608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc518Open in IMG/M
3300002914|JGI25617J43924_10082997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1161Open in IMG/M
3300003368|JGI26340J50214_10046618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1216Open in IMG/M
3300003505|JGIcombinedJ51221_10288870Not Available667Open in IMG/M
3300004080|Ga0062385_10206379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1065Open in IMG/M
3300004082|Ga0062384_100163922All Organisms → cellular organisms → Bacteria → Proteobacteria1275Open in IMG/M
3300004631|Ga0058899_10027880All Organisms → cellular organisms → Bacteria → Proteobacteria1484Open in IMG/M
3300005174|Ga0066680_10583154All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300005175|Ga0066673_10028674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2652Open in IMG/M
3300005177|Ga0066690_10699667Not Available671Open in IMG/M
3300005184|Ga0066671_10031384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2499Open in IMG/M
3300005434|Ga0070709_10287509All Organisms → cellular organisms → Bacteria → Proteobacteria1197Open in IMG/M
3300005435|Ga0070714_101927057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc577Open in IMG/M
3300005436|Ga0070713_100281630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1525Open in IMG/M
3300005561|Ga0066699_10637148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales765Open in IMG/M
3300005568|Ga0066703_10697803All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005576|Ga0066708_10636147Not Available681Open in IMG/M
3300005602|Ga0070762_10406019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium879Open in IMG/M
3300005602|Ga0070762_10595540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria734Open in IMG/M
3300005610|Ga0070763_10027308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2579Open in IMG/M
3300005610|Ga0070763_10177012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1127Open in IMG/M
3300005921|Ga0070766_10353182All Organisms → cellular organisms → Bacteria → Proteobacteria954Open in IMG/M
3300005921|Ga0070766_11234307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc517Open in IMG/M
3300006172|Ga0075018_10473597Not Available649Open in IMG/M
3300006175|Ga0070712_100522376All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300006176|Ga0070765_100005862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria8186Open in IMG/M
3300006176|Ga0070765_100165620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1984Open in IMG/M
3300006800|Ga0066660_11125866All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300006893|Ga0073928_10252115All Organisms → cellular organisms → Bacteria → Proteobacteria1349Open in IMG/M
3300006954|Ga0079219_10307100All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum987Open in IMG/M
3300007788|Ga0099795_10237004Not Available782Open in IMG/M
3300009092|Ga0105250_10461903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces phyllanthi571Open in IMG/M
3300009137|Ga0066709_101140553All Organisms → cellular organisms → Bacteria → Proteobacteria1147Open in IMG/M
3300009147|Ga0114129_12710042Not Available590Open in IMG/M
3300009156|Ga0111538_10487569All Organisms → cellular organisms → Bacteria1562Open in IMG/M
3300010083|Ga0127478_1020553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300010159|Ga0099796_10330294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300010859|Ga0126352_1073292Not Available510Open in IMG/M
3300010861|Ga0126349_1030187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1314Open in IMG/M
3300011120|Ga0150983_10133146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1048Open in IMG/M
3300011120|Ga0150983_13019415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria712Open in IMG/M
3300012198|Ga0137364_10620979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium815Open in IMG/M
3300012202|Ga0137363_10929444Not Available738Open in IMG/M
3300012212|Ga0150985_101901963All Organisms → cellular organisms → Bacteria → Proteobacteria742Open in IMG/M
3300012212|Ga0150985_110824539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium515Open in IMG/M
3300012391|Ga0134035_1094447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc509Open in IMG/M
3300012469|Ga0150984_101521517All Organisms → cellular organisms → Bacteria → Proteobacteria1743Open in IMG/M
3300012582|Ga0137358_10389884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales942Open in IMG/M
3300012915|Ga0157302_10463598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales538Open in IMG/M
3300016319|Ga0182033_11193531All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300016357|Ga0182032_11119194Not Available676Open in IMG/M
3300016445|Ga0182038_11919514Not Available535Open in IMG/M
3300018433|Ga0066667_11419591All Organisms → cellular organisms → Bacteria → Proteobacteria610Open in IMG/M
3300020080|Ga0206350_11498775All Organisms → cellular organisms → Bacteria → Proteobacteria1394Open in IMG/M
3300020579|Ga0210407_10099746All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2205Open in IMG/M
3300020579|Ga0210407_10634253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria831Open in IMG/M
3300020579|Ga0210407_11198346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria571Open in IMG/M
3300020580|Ga0210403_10163892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1820Open in IMG/M
3300020581|Ga0210399_11085220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium641Open in IMG/M
3300020582|Ga0210395_11020375All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300020583|Ga0210401_10269422All Organisms → cellular organisms → Bacteria → Proteobacteria1562Open in IMG/M
3300021151|Ga0179584_1041560Not Available623Open in IMG/M
3300021151|Ga0179584_1490563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales904Open in IMG/M
3300021170|Ga0210400_10549693Not Available952Open in IMG/M
3300021170|Ga0210400_10673092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria851Open in IMG/M
3300021374|Ga0213881_10003660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6475Open in IMG/M
3300021377|Ga0213874_10185906All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300021401|Ga0210393_10373584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1161Open in IMG/M
3300021405|Ga0210387_10306584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1397Open in IMG/M
3300021407|Ga0210383_10729030Not Available851Open in IMG/M
3300021407|Ga0210383_11265520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300021420|Ga0210394_10022975All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5722Open in IMG/M
3300021432|Ga0210384_10521174All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1069Open in IMG/M
3300021433|Ga0210391_11391188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria540Open in IMG/M
3300021439|Ga0213879_10093287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium838Open in IMG/M
3300021478|Ga0210402_10608623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1012Open in IMG/M
3300021479|Ga0210410_11304134All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300021559|Ga0210409_11007369Not Available707Open in IMG/M
3300021559|Ga0210409_11705567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria506Open in IMG/M
3300021560|Ga0126371_11871267Not Available720Open in IMG/M
3300021858|Ga0213852_1477557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria555Open in IMG/M
3300021860|Ga0213851_1516348Not Available1442Open in IMG/M
3300022504|Ga0242642_1011948All Organisms → cellular organisms → Bacteria → Proteobacteria1084Open in IMG/M
3300022513|Ga0242667_1030488Not Available613Open in IMG/M
3300022525|Ga0242656_1028928All Organisms → cellular organisms → Bacteria → Proteobacteria875Open in IMG/M
3300022527|Ga0242664_1007091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1467Open in IMG/M
3300022528|Ga0242669_1134795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc506Open in IMG/M
3300022709|Ga0222756_1038512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300022716|Ga0242673_1094195All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300022724|Ga0242665_10094222Not Available878Open in IMG/M
3300026312|Ga0209153_1234770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria600Open in IMG/M
3300026330|Ga0209473_1230366All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria663Open in IMG/M
3300026538|Ga0209056_10331881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1018Open in IMG/M
3300026551|Ga0209648_10264272All Organisms → cellular organisms → Bacteria → Proteobacteria1263Open in IMG/M
3300026552|Ga0209577_10756343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria545Open in IMG/M
3300026557|Ga0179587_10917669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M
3300027065|Ga0208489_1005821All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300027583|Ga0209527_1038938All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300027698|Ga0209446_1157306All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300027737|Ga0209038_10012884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2452Open in IMG/M
3300027783|Ga0209448_10082017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1081Open in IMG/M
3300027812|Ga0209656_10001405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria15733Open in IMG/M
3300027829|Ga0209773_10217106Not Available799Open in IMG/M
3300027884|Ga0209275_10066858All Organisms → cellular organisms → Bacteria → Proteobacteria1771Open in IMG/M
3300027889|Ga0209380_10161949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1309Open in IMG/M
3300027903|Ga0209488_10351974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1095Open in IMG/M
3300030730|Ga0307482_1109417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales766Open in IMG/M
3300030730|Ga0307482_1178778All Organisms → cellular organisms → Bacteria → Proteobacteria634Open in IMG/M
3300030902|Ga0308202_1029595Not Available915Open in IMG/M
3300030975|Ga0099845_1568587All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300031022|Ga0138301_1003641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria551Open in IMG/M
3300031057|Ga0170834_106281717All Organisms → cellular organisms → Bacteria → Proteobacteria844Open in IMG/M
3300031057|Ga0170834_109936563All Organisms → cellular organisms → Bacteria → Proteobacteria1048Open in IMG/M
3300031091|Ga0308201_10434170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300031092|Ga0308204_10052496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium996Open in IMG/M
3300031231|Ga0170824_109290347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria528Open in IMG/M
3300031231|Ga0170824_128584184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1486Open in IMG/M
3300031561|Ga0318528_10576651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales604Open in IMG/M
3300031590|Ga0307483_1006118All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300031679|Ga0318561_10354180Not Available805Open in IMG/M
3300031821|Ga0318567_10274402All Organisms → cellular organisms → Bacteria → Proteobacteria949Open in IMG/M
3300031866|Ga0316049_115177Not Available591Open in IMG/M
3300032042|Ga0318545_10346557All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300032515|Ga0348332_10706457Not Available663Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil26.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil8.06%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.26%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil6.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.23%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.42%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.42%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.61%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.61%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.61%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.81%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.81%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003368Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010083Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010859Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012391Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027065Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030975Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031590Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031866Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1012060813300001545Forest SoilVLEGVMILLAIAGSTVGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
JGI25617J43924_1008299723300002914Grasslands SoilMTLLAIAGSTIGAWWRLAILALTQPAPPSKSDVPPEYYKFPIF*
JGI26340J50214_1004661823300003368Bog Forest SoilMIVLALAGRAIGELWRRAILAFEQLAPRSNRDVPPEFYRFPIF*
JGIcombinedJ51221_1028887023300003505Forest SoilMILLAIAGSTIXAWWRRAILAMTHPEPRSKSEVPLEXYKFPIF*
Ga0062385_1020637923300004080Bog Forest SoilMILLAIAGSTIGAWWRRAILALAHPAPSSKRDIPPEFYRFPIF*
Ga0062384_10016392233300004082Bog Forest SoilMILLAIAGSTIGAWWRRAILALTQPAPRSKGEVPLEFYRFPIF*
Ga0058899_1002788023300004631Forest SoilMTLLTIAGGTIGAWWRRAMLALTQPAPRSKSDVPPEYYRFPIF*
Ga0066680_1058315433300005174SoilMIMLAIVGSTIGEWWRRAILAFAKPAPRSSRDVPPEFYNFPLF*
Ga0066673_1002867433300005175SoilMILLAIAGSTIGAWWRRAILALAHPAPSPRRDVPAEFYKFPLF*
Ga0066690_1069966713300005177SoilAVLEGVMILLAIAGSTIGTWWRRAILALTRPAPRSKNEVPLEFYKFPMF*
Ga0066671_1003138443300005184SoilMILLAIAGSTIGAWWCRAILALAHPAPSPRRDVPAEFYKFPLF*
Ga0070709_1028750923300005434Corn, Switchgrass And Miscanthus RhizosphereMILLAMAGSTIGAWWRRAILALAHPAPRSKSDVPPEFYRFPIF*
Ga0070714_10192705713300005435Agricultural SoilMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
Ga0070713_10028163023300005436Corn, Switchgrass And Miscanthus RhizosphereMILLAIAGSTIGAWWRRAILALTHPAPRSKSDVPPEFYRFPIF*
Ga0066699_1063714823300005561SoilMTLLAIAGSTIGAWWRRAILALTQPAPRSKSEVPPEYYKFPIF*
Ga0066703_1069780323300005568SoilMTLVAIAGSTIGAWWRRAILALTRPAPRSKNEVPLEYYRFPMF*
Ga0066708_1063614723300005576SoilLLAIVGGTIGTWWRRAILALTRPAPRSKNEVPLEFYRFPMF*
Ga0070762_1040601923300005602SoilQQAVLEGVMTLLTIAGGTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF*
Ga0070762_1059554033300005602SoilMILLAIAGSTIRAWWRRAMLAMTHPEPRSKSEVPLEYYKFPIF*
Ga0070763_1002730833300005610SoilMILLAIAGSTIGAWWRRAILALAHPAPRSKSDVPPEFYKFPIF*
Ga0070763_1017701213300005610SoilPQQQAVLEGVMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
Ga0070766_1035318223300005921SoilMILLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
Ga0070766_1123430713300005921SoilPQQQAVLEGVMTLLTIAGGTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF*
Ga0075018_1047359713300006172WatershedsVMILLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
Ga0070712_10052237633300006175Corn, Switchgrass And Miscanthus RhizosphereMILLAIAGSTIGAWWRRAILALAHPAPRSKSDVPPEFYRFPIF*
Ga0070765_10000586253300006176SoilMTLLTIAGGTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF*
Ga0070765_10016562043300006176SoilMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF*
Ga0066660_1112586623300006800SoilMTLLAIAGSTIGAWWRLAILALTQPAPRSKSDVPPEYYKFPIF*
Ga0073928_1025211523300006893Iron-Sulfur Acid SpringMILLAIAGSTIGAWWRRAILALTHQAPTSKRDVPAEYYKFPIF*
Ga0079219_1030710013300006954Agricultural SoilMTLLAIAGSTIGAWWRRGILALTQPAPRSKSDVPPEYYRFPIF
Ga0099795_1023700413300007788Vadose Zone SoilQAVLEGVMILLAIAGSTIGAWWRRAILTLAQPTPRSKSDVPPEFYRFPIF*
Ga0105250_1046190313300009092Switchgrass RhizosphereMMLLLAIAGGTIGEWVRRAILALAQRAARSSRDVPPEFYKFPLF*
Ga0066709_10114055323300009137Grasslands SoilMIMLAIVGSTIGEWWRRAILTFAKPAPRSSRDVPPEFYNFPLF*
Ga0114129_1271004213300009147Populus RhizosphereQQAVLEGVMILLAIAGSTIGAWWRRAILALTHPAPRSKSDVPPEFYRFPPF*
Ga0111538_1048756933300009156Populus RhizosphereMLLLAIAGGTIGGWVRRAILALAQRAARSSRDVPPEFYKFPLF*
Ga0127478_102055323300010083Grasslands SoilMILLAIAGSTIGAWWRRAILALTRPGPRSNNKVPIEFYRFPMF*
Ga0099796_1033029423300010159Vadose Zone SoilMILLAIAGSTIGAWWRRAILALAHQAPRSKSDVPPEFYRFPIF*
Ga0126352_107329223300010859Boreal Forest SoilLLAIAGSTIGAWWRRVILALAQPAPRSKSDVPPEFYRFPIF*
Ga0126349_103018723300010861Boreal Forest SoilMILLAIAGSTIGAWWRRAILALAHPAPHSKGDVPPEFYKFPIF*
Ga0150983_1013314613300011120Forest SoilQAVLEGVMTLLAIAGSTIGAWWRRAILVLAHPAPRLKSDVPPEFYKFPIF*
Ga0150983_1301941523300011120Forest SoilMTLLAIAGSTIGAWWRRAILALTQPAPHSKSEVPLEYYKFPIF*
Ga0137364_1062097923300012198Vadose Zone SoilLEGVMILLAFAGGTIGEWVRRAIVALARLAPHSNRDIPPEFYKFPLF*
Ga0137363_1092944423300012202Vadose Zone SoilRVPEQQALLEGVMIMLAIVGSTIGEWWRRAILAFAKPAPRSSRDVPPEFYNFPLF*
Ga0150985_10190196323300012212Avena Fatua RhizosphereMMLLLAIAGGTIGEWARRAILALAQRAARSSRDVPPEFYKFPLF*
Ga0150985_11082453923300012212Avena Fatua RhizosphereMILLAIAGSAIGAWWRRAILALAHPAPRSKSDVPPEFYRFPIF*
Ga0134035_109444713300012391Grasslands SoilATSLLEGVMILLAIAGSTIGAWWRRAILALAHPAPSPRRDVPAEFYKFPLF*
Ga0150984_10152151733300012469Avena Fatua RhizosphereMSLLAIVGGTIGTWWRRAILALTRPAPRSKNEVPLEFYRFPMF*
Ga0137358_1038988423300012582Vadose Zone SoilMILLAIAGSTIGAWWRRAILAMTHPKPRAKSEVPLEYYKFPIF*
Ga0157302_1046359823300012915SoilMILVAIAGSTIGAWWRRAILALTQPAPHSKNEVPLEFYRFPIF*
Ga0182033_1119353123300016319SoilMTLLAIAGSTIGAWWRRAILALAQPATRSKGEVPLEFYRFPIF
Ga0182032_1111919423300016357SoilPEQQAVLEGVMTLLAIAGSTIGAWWRRAILALAQPAPRSKGEVPLEFYRFPIF
Ga0182038_1191951423300016445SoilMTLLAIAGSTIGAWWRRAILALAQPATRSKVEVPQEFYRCPIF
Ga0066667_1141959123300018433Grasslands SoilMTLLAIAGSTIGAWWHRAILALTQPAPRSKSDVPPEYYKFPIF
Ga0206350_1149877523300020080Corn, Switchgrass And Miscanthus RhizosphereMLLLAIAGGTIGEWVRRAILALAQRAARSSRDVPPEFYKFPLF
Ga0210407_1009974623300020579SoilMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210407_1063425323300020579SoilMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210407_1119834623300020579SoilMILLAIAGSTIGAWWRRAILVLAHPAPRLKSDVPPEFYKFPIF
Ga0210403_1016389223300020580SoilMTSLTIAGSTIGAWWRRAILALAQPAPRSKSDVPPEYYRFPIF
Ga0210399_1108522023300020581SoilMILLAMAGSTIGAWWRRAILALAHPAPRSKSDVPPEFYRFPIF
Ga0210395_1102037523300020582SoilMTLLTIAGSTIGAWWRRAILVLTQPAPRSKSEVPPEYYRFPIF
Ga0210401_1026942233300020583SoilMTLLTIAGSTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF
Ga0179584_104156023300021151Vadose Zone SoilMILLAIVGSTIGEWWHRAILAFAKPAPRSNRDVPPEFYKFPLF
Ga0179584_149056323300021151Vadose Zone SoilMILLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210400_1054969323300021170SoilMTLLAIAGSTIGAWWRRAILAMTHPEQPRSKSEVPLEYYKFPIF
Ga0210400_1067309213300021170SoilMILLAIAGSTIRAWWRRAILGMTHPEPRSKSEVPLE
Ga0213881_1000366033300021374Exposed RockMILLTIVGGTIGQWWRRAILALSRPAPGSNRDDPPEFYRFPPF
Ga0213874_1018590623300021377Plant RootsMTLLAIAGSTIGTWWRRAILALTGPAPRSKNQVPLEFYRFPMF
Ga0210393_1037358423300021401SoilMILLAIAGSTIRAWWRLAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210387_1030658413300021405SoilMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYS
Ga0210383_1072903013300021407SoilEGVMILLAIAGSTIGAWWRRAILVLAHPAPRLKSDVPPEFYKFPIF
Ga0210383_1126552023300021407SoilMILLAIAGSTIGAWWRRAILAMTHPEQPRSKSEVPLEYYKFPIF
Ga0210394_1002297533300021420SoilMTLLAIAGSTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF
Ga0210384_1052117413300021432SoilAVLEGVMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210391_1139118813300021433SoilMTLLAIAGSTIGAWWRRAILVLAHPAPRLKSDVPPEFYKFPIF
Ga0213879_1009328713300021439Bulk SoilGKTIGAWWRRAILALTRPAPRSKNEVPLEYYRFPIF
Ga0210402_1060862313300021478SoilMILLAIAGSTIRAWWRRAILAMTHPEPRSKSEVPLEYYKF
Ga0210410_1130413413300021479SoilMTLLAIAGSTIGAWWRRAILALTQPAPHSKSEVPLEYYKFPIF
Ga0210409_1100736913300021559SoilQQQAVLEGVMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0210409_1170556723300021559SoilMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYY
Ga0126371_1187126713300021560Tropical Forest SoilATSPSGENKMILLTIVGGTIGQWWRRAILALSRPALGSKHDAPPEFYRFPPF
Ga0213852_147755723300021858WatershedsMILLAIAGSTIGAWWRRAILALTHPALLSKSDVPPEFYKFPIF
Ga0213851_151634833300021860WatershedsMTLLAIAGSTIGAWWRRAILALTHPALLSKSDVPPEFYKFPIF
Ga0242642_101194823300022504SoilMTLLAIAGSTIRAWWRRAILAMTHPGPRSKSEVPLEYYKFPIF
Ga0242667_103048813300022513SoilIAGSTIGAWWRRAILALTQPAPRSKSDVPPEYYKFPIF
Ga0242656_102892823300022525SoilMTLLAIAGSTIGAWWRRAILAMTHPGPRSKSEVPLEYYKFPIF
Ga0242664_100709133300022527SoilTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0242669_113479513300022528SoilQQQAVLEGVMTLLTIAGSTIGGWWRRAILALTQPAPRSKSEVPPEYYRFPIF
Ga0222756_103851223300022709SoilMILLAIAGSTIGAWWRRAILVLAHPAPRSKSDVPPEFYKFPIF
Ga0242673_109419523300022716SoilGCRIPQQQAVLEGVMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0242665_1009422233300022724SoilMTLLAIAGSTIGAWWRRAILAMTNPEPRSKSEVPVEYYKFPIF
Ga0209153_123477013300026312SoilMILLAIAGSTIGAWWCRAILALAHPAPSPRRDVPAEVYK
Ga0209473_123036613300026330SoilMILLAIAGSTIGAWWRRAILALAHPAPSPRRDVPAEFYKFPLF
Ga0209056_1033188123300026538SoilMIMLAIVGSTIGEWWRRAILAFAKPAPRSSRDVPPEFYNFPLF
Ga0209648_1026427223300026551Grasslands SoilMTLLAIAGSTIGAWWRLAILALTQPAPPSKSDVPPEYYKFPIF
Ga0209577_1075634323300026552SoilMTLLAIAGSTIGAWWRRAILALTQPAPRSKSDVPPEYYKFPIF
Ga0179587_1091766913300026557Vadose Zone SoilMILLAIAGSTISAWWRRAILALTQPAPHPKGEVPLEFYRFPIF
Ga0208489_100582123300027065Forest SoilMTLLAIAGTTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0209527_103893823300027583Forest SoilMTLLAIVGGTIGAWWRRAILGMTHPEPRSKSEVPLEYYKFPIF
Ga0209446_115730623300027698Bog Forest SoilMILLAIAGSTIGAWWRRAILALTQPVLHSKGEVPLEFYRFPIF
Ga0209038_1001288423300027737Bog Forest SoilMILLAIAGSTIGAWWRRAILVLTHPATRSKSDVPPEFYRFPIF
Ga0209448_1008201713300027783Bog Forest SoilMILLAIAGSTIGAWWRRAILALTQPALHPKGEVPLEFYRFPI
Ga0209656_10001405113300027812Bog Forest SoilMIVLALAGRAIGELWRRAILAFEQLAPRSNRDVPPEFYRFPIF
Ga0209773_1021710623300027829Bog Forest SoilMILLAIAGSTIGAWWRRAILALTQPAPRSKGEVPLEFYRFPIF
Ga0209275_1006685833300027884SoilMTLLTIAGGTIGAWWRRAILALTQPAPRSKSDVPPEYYRFPIF
Ga0209380_1016194913300027889SoilRIPQQQAVLEGVMTLLAIAGSTIGAWWRRAILAMTHPEPRSKSEVPLEYYKFPIF
Ga0209488_1035197433300027903Vadose Zone SoilMILLAIAGSTIGAWWRRAILTLAQPTPRSKSDVPPEFYRFPIF
Ga0307482_110941723300030730Hardwood Forest SoilMILLAIAGSAIGAWWRRAILALTQPSPRSKGEVPLEFYRFPMF
Ga0307482_117877823300030730Hardwood Forest SoilMILLAIAGSTIGAWWRRAILALTQPAPHPKGEVPLEFYRFPIF
Ga0308202_102959523300030902SoilMTLLAIAGSTIGAWWRRAILALTQPAPHPKGDEVPLEFYRFPIF
Ga0099845_156858723300030975Boreal Forest SoilMILLAIAGSTIGAWWRRAILALTHQAPTSKRDVPPEYYKFPIF
Ga0138301_100364123300031022SoilMTLLAMAGSTIGAWWRRAILALAHPVPRSKSDVPPEFYKFPIF
Ga0170834_10628171723300031057Forest SoilMILLALVGRTIGDWWRRAILALVQPAPRSNRDVPPEFYRFPLF
Ga0170834_10993656323300031057Forest SoilMILLAIARSTIGAWWRRAILALAHPAPRSESDVPPEFYRFPIF
Ga0308201_1043417023300031091SoilMILLAIAGSAIGAWWRRAILALAHPAPRSKSDVPPEFYRFPIF
Ga0308204_1005249613300031092SoilLLLAIAGGTIGGWARRAILALAERAARSSRDVPPEFYKFPLF
Ga0170824_10929034723300031231Forest SoilMILLAIAGSTIRAWWRRSILAMTHPEPRSKSEVPLEYYKFPIF
Ga0170824_12858418423300031231Forest SoilMILLAIVGSTIGASWRRAILALTRPAPRSNNDVPTEFYRFPVF
Ga0318528_1057665123300031561SoilMTLLAIAGSTIGAWWRRAILALAQPAPRSKGEVPLEFYRFPIF
Ga0307483_100611823300031590Hardwood Forest SoilMILLALAGRTIGDRWRRVILALAQPPRSNRDVPPEFYRFPLF
Ga0318561_1035418023300031679SoilVPEQQAVLEGVMTLLAIAGSTIGAWWRRAILALAQPAPRSKGEVPLEFYRFPIF
Ga0318567_1027440213300031821SoilMILLALAGRTIGEWWRRAILAFAEPAPRSNRDVPPEFYKFPLF
Ga0316049_11517723300031866SoilGVMTLLAIAGSTIGAWWRRAILALTHPASHSKSDVPPEFYKFPLF
Ga0318545_1034655723300032042SoilVLEGVMTLLAIAGSTIGAWWRRAILALAQPAPRSKGEVPLEFYRFPIF
Ga0348332_1070645723300032515Plant LitterMILLAIAGSTIGAWWRRAILALTRPAPHPKSDVPPEFYKFPLF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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