Metagenome / Metatranscriptome Family F069242

Basic Information
Family ID	F069242
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	42 residues
Representative Sequence	AGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Number of Associated Samples	108
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	95.97 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Bacteria (88.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.677 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.62% β-sheet: 0.00% Coil/Unstructured: 46.38%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00561	Abhydrolase_1	21.77
PF00106	adh_short	5.65
PF13561	adh_short_C2	4.03
PF05977	MFS_3	2.42
PF13602	ADH_zinc_N_2	2.42
PF13577	SnoaL_4	1.61
PF03466	LysR_substrate	1.61
PF12697	Abhydrolase_6	1.61
PF13271	DUF4062	1.61
PF02954	HTH_8	1.61
PF01494	FAD_binding_3	1.61
PF12680	SnoaL_2	1.61
PF00672	HAMP	0.81
PF12833	HTH_18	0.81
PF12439	GDE_N	0.81
PF13460	NAD_binding_10	0.81
PF01479	S4	0.81
PF07589	PEP-CTERM	0.81
PF01610	DDE_Tnp_ISL3	0.81
PF01914	MarC	0.81
PF00069	Pkinase	0.81
PF02518	HATPase_c	0.81
PF07166	DUF1398	0.81
PF00724	Oxidored_FMN	0.81
PF13538	UvrD_C_2	0.81
PF00723	Glyco_hydro_15	0.81
PF04397	LytTR	0.81
PF01590	GAF	0.81
PF13784	Fic_N	0.81
PF00111	Fer2	0.81
PF02371	Transposase_20	0.81
PF00027	cNMP_binding	0.81
PF11171	DUF2958	0.81
PF01522	Polysacc_deac_1	0.81
PF09509	Hypoth_Ymh	0.81
PF00107	ADH_zinc_N	0.81
PF06736	TMEM175	0.81
PF02909	TetR_C_1	0.81
PF13458	Peripla_BP_6	0.81
PF01152	Bac_globin	0.81
PF16912	Glu_dehyd_C	0.81
PF02624	YcaO	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.23
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.23
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.42
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.61
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.61
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.61
COG5562	Prophage-encoded protein YbcV, DUF1398 family	Mobilome: prophages, transposons [X]	0.81
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.81
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.81
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.81
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.81
COG1944	Ribosomal protein S12 methylthiotransferase accessory factor YcaO	Translation, ribosomal structure and biogenesis [J]	0.81
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.81
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.81
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.55 %
Unclassified	root	N/A	11.29 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.61 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.45 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.65 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.61 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.61 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.81 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.81 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.65 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.42 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	1.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.81 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.81 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.65 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	2.42 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.42 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1.61 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.81 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.81 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.65 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2.42 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.42 %
Salinibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter	1.61 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.81 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.81 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.81 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.65 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2.42 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.42 %
Salinibacter ruber	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	1.61 %
Afipia sp. GAS231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	0.81 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.81 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.81 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.81 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.81 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101782121	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005445\|Ga0070708_102198626	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005467\|Ga0070706_100023822	All Organisms → cellular organisms → Bacteria → Proteobacteria	5636	Open in IMG/M
3300005538\|Ga0070731_10986803	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005541\|Ga0070733_10293042	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005541\|Ga0070733_10706637	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005552\|Ga0066701_10112395	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300005558\|Ga0066698_10282216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300005712\|Ga0070764_10379170	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005843\|Ga0068860_100944978	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005921\|Ga0070766_10003145	All Organisms → cellular organisms → Bacteria	8315	Open in IMG/M
3300005921\|Ga0070766_10889552	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006041\|Ga0075023_100285506	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006173\|Ga0070716_100812578	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006175\|Ga0070712_100176470	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300006237\|Ga0097621_101336897	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006796\|Ga0066665_10120368	Not Available	1955	Open in IMG/M
3300006806\|Ga0079220_10275766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1023	Open in IMG/M
3300006844\|Ga0075428_102308890	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006846\|Ga0075430_100384761	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006893\|Ga0073928_10540018	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300009012\|Ga0066710_100080050	All Organisms → cellular organisms → Bacteria	4253	Open in IMG/M
3300009088\|Ga0099830_10824499	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300009098\|Ga0105245_10996117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300009100\|Ga0075418_10418750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300009137\|Ga0066709_100149250	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300010048\|Ga0126373_13297770	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010326\|Ga0134065_10275084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	636	Open in IMG/M
3300010339\|Ga0074046_10421619	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300010360\|Ga0126372_12458846	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010397\|Ga0134124_11419520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	720	Open in IMG/M
3300010403\|Ga0134123_12011900	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300011119\|Ga0105246_10705393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	885	Open in IMG/M
3300011271\|Ga0137393_11770319	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012096\|Ga0137389_10856389	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012207\|Ga0137381_10746948	Not Available	849	Open in IMG/M
3300012357\|Ga0137384_11562046	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012362\|Ga0137361_10174688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1934	Open in IMG/M
3300012582\|Ga0137358_10213394	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012683\|Ga0137398_10889122	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	621	Open in IMG/M
3300012685\|Ga0137397_10320882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300012925\|Ga0137419_11679430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	541	Open in IMG/M
3300012929\|Ga0137404_10874112	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300012951\|Ga0164300_10509948	Not Available	690	Open in IMG/M
3300012975\|Ga0134110_10628568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	501	Open in IMG/M
3300013308\|Ga0157375_11287812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	859	Open in IMG/M
3300014657\|Ga0181522_10799688	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300014968\|Ga0157379_12601627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300016270\|Ga0182036_11452162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	575	Open in IMG/M
3300016294\|Ga0182041_11383064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	646	Open in IMG/M
3300016341\|Ga0182035_11585795	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017970\|Ga0187783_10939184	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300017974\|Ga0187777_11277861	Not Available	539	Open in IMG/M
3300018029\|Ga0187787_10448950	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018062\|Ga0187784_11504744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	533	Open in IMG/M
3300018481\|Ga0190271_13188574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	550	Open in IMG/M
3300020579\|Ga0210407_10074792	All Organisms → cellular organisms → Bacteria → Acidobacteria	2546	Open in IMG/M
3300020579\|Ga0210407_10088821	All Organisms → cellular organisms → Bacteria	2337	Open in IMG/M
3300020580\|Ga0210403_10421861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300020580\|Ga0210403_11297927	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300020581\|Ga0210399_11503149	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300020583\|Ga0210401_10721141	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300021088\|Ga0210404_10467831	Not Available	710	Open in IMG/M
3300021168\|Ga0210406_10132924	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300021171\|Ga0210405_10376157	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300021178\|Ga0210408_10318669	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300021178\|Ga0210408_10687307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	807	Open in IMG/M
3300021178\|Ga0210408_11493932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300021403\|Ga0210397_10261211	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300021404\|Ga0210389_10903311	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300021405\|Ga0210387_10038420	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
3300021405\|Ga0210387_10273398	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300021405\|Ga0210387_10645571	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300021420\|Ga0210394_10395392	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300021420\|Ga0210394_10828353	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300021432\|Ga0210384_10965432	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300021432\|Ga0210384_11638084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	549	Open in IMG/M
3300021474\|Ga0210390_10924464	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300021475\|Ga0210392_10662493	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300021479\|Ga0210410_10269520	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300022508\|Ga0222728_1027999	Not Available	856	Open in IMG/M
3300022521\|Ga0224541_1015158	Not Available	830	Open in IMG/M
3300022712\|Ga0242653_1031287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300025916\|Ga0207663_11585921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300026942\|Ga0207783_1008038	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300027370\|Ga0209010_1053714	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027371\|Ga0209418_1064100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300027591\|Ga0209733_1109266	Not Available	692	Open in IMG/M
3300027652\|Ga0209007_1017691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1846	Open in IMG/M
3300027652\|Ga0209007_1149050	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300027660\|Ga0209736_1021670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	1966	Open in IMG/M
3300027684\|Ga0209626_1133803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	651	Open in IMG/M
3300027824\|Ga0209040_10295494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	791	Open in IMG/M
3300027842\|Ga0209580_10222750	Not Available	937	Open in IMG/M
3300027842\|Ga0209580_10522861	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	590	Open in IMG/M
3300027889\|Ga0209380_10010784	All Organisms → cellular organisms → Bacteria	5305	Open in IMG/M
3300027889\|Ga0209380_10686657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300028906\|Ga0308309_11599911	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300029951\|Ga0311371_11663047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699	Open in IMG/M
3300030002\|Ga0311350_10709090	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300030520\|Ga0311372_12301364	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031128\|Ga0170823_10533023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1238	Open in IMG/M
3300031231\|Ga0170824_119896716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300031234\|Ga0302325_13236741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031545\|Ga0318541_10395052	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031572\|Ga0318515_10498741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	650	Open in IMG/M
3300031708\|Ga0310686_110678773	Not Available	724	Open in IMG/M
3300031720\|Ga0307469_10949506	Not Available	800	Open in IMG/M
3300031740\|Ga0307468_100194727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1363	Open in IMG/M
3300031753\|Ga0307477_10947152	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031754\|Ga0307475_11154093	Not Available	605	Open in IMG/M
3300031823\|Ga0307478_10518996	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031910\|Ga0306923_10118223	All Organisms → cellular organisms → Bacteria → Proteobacteria	3004	Open in IMG/M
3300031944\|Ga0310884_10308329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300031946\|Ga0310910_11044797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300031947\|Ga0310909_10733530	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300031947\|Ga0310909_10872691	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300031954\|Ga0306926_11366980	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300031954\|Ga0306926_11460382	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300032180\|Ga0307471_100564326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1294	Open in IMG/M
3300032205\|Ga0307472_102300664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	545	Open in IMG/M
3300032205\|Ga0307472_102427454	Not Available	532	Open in IMG/M
3300034124\|Ga0370483_0112501	Not Available	901	Open in IMG/M
3300034163\|Ga0370515_0462249	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.74%
Host-Associated	Host-Associated	7.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.71%
Plants	Host-Associated → Plants	7.26%
Aquatic	Environmental → Aquatic	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.65%
Peat	Environmental → Terrestrial → Peat	4.03%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.71%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.61%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1017821212	3300004091	Bog Forest Soil	GEVSDKNDPEALARFFVATIQGMRAMAKVNSNRNALEQVAKLALSSLS*
Ga0070708_1021986261	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GETDTGALAKFFVASIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0070706_1000238225	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAGKDAGALARFFLATIQGMRSTACANSNRAALEQVARVALSTLD*
Ga0070731_109868031	3300005538	Surface Soil	VTIQGMRAIARLKSDRKALERVARVALAVFKSSNSASLSK*
Ga0070733_102930421	3300005541	Surface Soil	DAGALARFFVATIQGMRAMARLKSDRRALRQVARIALAVFDRS*
Ga0070733_107066371	3300005541	Surface Soil	ALAKFFVATIQGMRAMARLKSNRRALRQVAKIALAALHG*
Ga0066701_101123951	3300005552	Soil	ALAHFFVVTIQGMRATARLKSDRQALEQVARVALAVFN*
Ga0066698_102822162	3300005558	Soil	KALAHFFVVTIQGMRATARLKSDRQALEQVARVALAVFK*
Ga0070764_103791702	3300005712	Soil	RFFVATIQGMRAMARLKSDRKALEQIARVALSVFNLSTGA*
Ga0068860_1009449781	3300005843	Switchgrass Rhizosphere	ALARFFLVTIQGMRSTARVHSNRTALEQVARVALAALG*
Ga0070766_100031451	3300005921	Soil	ALAKFFVATIQGMRAMARLKSDRGALRQVAKIALAVFDRS*
Ga0070766_108895521	3300005921	Soil	DASALAKFFVVTIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0075023_1002855062	3300006041	Watersheds	ALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDDIRRL*
Ga0070716_1008125781	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ALARFFVATIQGMRAMAKLNSNRNSLEQVAKLALSTIS*
Ga0070712_1001764701	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ALARFFVATIQGMRAMAKLNSNRKALEQVAKLALSTIG*
Ga0097621_1013368971	3300006237	Miscanthus Rhizosphere	LAKFFVVTIQGMRAMARLNSDRRALRQVAKIALAQFE*
Ga0066665_101203683	3300006796	Soil	FFVVTIQGMRAMARLKSDKRALEQVARVALGVFNSSRHEKN*
Ga0079220_102757661	3300006806	Agricultural Soil	RRTWGETDTGALAKFFVASIRVMRAMARLKSDRRAVRQVARIALAVFDR*
Ga0075428_1023088902	3300006844	Populus Rhizosphere	LARFFMVTIQGMRATARARSDRAALEQVAKLALTMLD*
Ga0075430_1003847613	3300006846	Populus Rhizosphere	AALARFYVVTIQGMRSTARARSDRAALEQVANLALSMLD*
Ga0073928_105400181	3300006893	Iron-Sulfur Acid Spring	HELRPGTDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAAFDR*
Ga0066710_1000800504	3300009012	Grasslands Soil	PAALAHFFVVTIQGMRAMARLKSDKRALEQVARVALGVFNSPHPRHEKN
Ga0099830_108244991	3300009088	Vadose Zone Soil	RTHDPKALAHFFVVTIQGMRATARVKSDRQALEQVARVALAVFN*
Ga0105245_109961172	3300009098	Miscanthus Rhizosphere	VVTIQGMRAMARLKSERKALEQVARVALAVFKASNTS*
Ga0075418_104187503	3300009100	Populus Rhizosphere	VARFFAVTIQGMRAMARLKSDRRALRQVARVALAALDAR*
Ga0066709_1001492501	3300009137	Grasslands Soil	DDPAALAHFFVVTIQGMRAMARLKSDKRALEQVARVALGVFNSPHPRHEKN*
Ga0126373_132977701	3300010048	Tropical Forest Soil	KDDPAALARFFVVTIQGMRAMARLKSDRKALEQVARIALARFKSPDEE*
Ga0134065_102750841	3300010326	Grasslands Soil	AALAHFFVVTIQGMRTTARLTSDRQALEQVARIALAVFS*
Ga0074046_104216191	3300010339	Bog Forest Soil	FFVATIQGMRAMAKLNSNRKALEQVARLALSALN*
Ga0126372_124588461	3300010360	Tropical Forest Soil	SAKENVAALGRFFVVTIQGMRAMARLKSDRKALKQVAKVALAVFR*
Ga0134124_114195202	3300010397	Terrestrial Soil	AGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0134123_120119002	3300010403	Terrestrial Soil	AASEDPAALARFFVVTIQGMRAIARLRSDRKALEQVTRVALGVFA*
Ga0105246_107053932	3300011119	Miscanthus Rhizosphere	AKFFVASIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0137393_117703191	3300011271	Vadose Zone Soil	KALARFFTATIQGMRAMARLRSDRKSLEQVARLALAALDQ*
Ga0137389_108563892	3300012096	Vadose Zone Soil	SRTHKPAALAHFFVVTIQGMRTTARLTSDRKALEQVARIALAVFS*
Ga0137381_107469481	3300012207	Vadose Zone Soil	LARFFVVTIQGMRALARLKSDRRALLEEVTRVALAVLVEKAPHS
Ga0137384_115620462	3300012357	Vadose Zone Soil	PSEQDARAVAKFFVVTVQGMRAMARLKSDRRALKQVAKLALAVFDRQGYR*
Ga0137361_101746881	3300012362	Vadose Zone Soil	RFFVATIQGMRAMAKLHSNRKALEQVAKLALSTLD*
Ga0137358_102133943	3300012582	Vadose Zone Soil	VAGVLEHGALAKFFVASIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0137398_108891221	3300012683	Vadose Zone Soil	HNGADAGALAKFFVATIQGMRAMARLKSDRRALRQVAKIALAVFDRS*
Ga0137397_103208823	3300012685	Vadose Zone Soil	GELGGETDTGALAKFFAASIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0137419_116794301	3300012925	Vadose Zone Soil	HFFVVTIQGMRTTARLTSDRQALEQVARIALAVFS*
Ga0137404_108741121	3300012929	Vadose Zone Soil	AALAHFFVVTIQGMRTTARLTSDRKALEQVARIALAVFS*
Ga0164300_105099481	3300012951	Soil	DPAALARFFVATIQGMRAMAKLNSNRKALEQVAKLALRTIS*
Ga0134110_106285682	3300012975	Grasslands Soil	SGEFAPDKDAGALARCCGATMQGMRSTARASSNRAALEQVARVALSTLD*
Ga0157375_112878122	3300013308	Miscanthus Rhizosphere	GEFGEETDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR*
Ga0181522_107996881	3300014657	Bog	QDPVALGRFFVVTIQGMRAMARLKSDRKALEQVARVALAVFEES*
Ga0157379_126016271	3300014968	Switchgrass Rhizosphere	EALAKFLVVTIQGMRAMARLKSDRRALRQVAKIALAMLDR*
Ga0182036_114521622	3300016270	Soil	LARFFVATIQGMRAMAKLNSDRKSLEQVAKLAWSTIS
Ga0182041_113830641	3300016294	Soil	ALARFFVATIQGMRAMAKLNSNRKSLEQVAKLALSTIS
Ga0182035_115857952	3300016341	Soil	VVTIQGMRAMARLKSDRKALEEVARVALGVFNPSNAVE
Ga0187783_109391842	3300017970	Tropical Peatland	SNSQDPVALARFFIVTIQGMRSMARLKSDRRALRQVAKVALAVFDNGKKAVTGAKVTLSSRS
Ga0187777_112778612	3300017974	Tropical Peatland	APNADLPALARFFVATIQGLRSMARLKSDRKALEQVAHVALAVFNA
Ga0187787_104489501	3300018029	Tropical Peatland	DKDTTALARFFVVTIQGMRAIAKLRSDRKALEQVARVALGVFG
Ga0187784_115047442	3300018062	Tropical Peatland	VATIQGMRAMARLKSDRKALEQVARVALAVFHSFAATKSE
Ga0190271_131885742	3300018481	Soil	ARFFMVTIQGMRATARARSDRAALQQVANLALSMLD
Ga0210407_100747925	3300020579	Soil	AGALAKFFVATIQGMRAMARLKSNRRALRQVARIALAAFDR
Ga0210407_100888211	3300020579	Soil	ELRPATDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0210403_104218612	3300020580	Soil	ARFFVATIQGMRAMARLKSDRKALEQIARIALAVFNSPNTA
Ga0210403_112979271	3300020580	Soil	GELSGKADAKALAQFFTVTIQGMRAMARVRSDRKSLEQVARVALAALDQ
Ga0210399_115031492	3300020581	Soil	RAEAGALAKFFVVTIQGMRAMARLKSDRRALRQVARIALTMFDP
Ga0210401_107211411	3300020583	Soil	SGEVSSKHDPAALARFFVATIQGLRAMAKLNSNRKALEQVAHLALSRLD
Ga0210404_104678311	3300021088	Soil	SDRQDPVALARFFVATIQGMRAMAKLHSNRKALEQVAKLALSTLD
Ga0210406_101329244	3300021168	Soil	SAEALARFFVVTIQGMRAMARLKSDRQARRQVAKIALALFDRQ
Ga0210405_103761572	3300021171	Soil	AALARFFVATIQGMRAMAKLNSNRKALEQVAKLALRTIS
Ga0210408_103186691	3300021178	Soil	FFTVTIQGMRAMARLSSDRKSLEQVARVALATLDQ
Ga0210408_106873072	3300021178	Soil	KFFVASIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0210408_114939322	3300021178	Soil	VALARFFVATIQGMRAMAKLHSNRKALEQVAKLALSTLD
Ga0210397_102612111	3300021403	Soil	PAALARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTIS
Ga0210389_109033111	3300021404	Soil	IVALARFFVATIQGMRAIARLSHDRKTLENIATVALNSLES
Ga0210387_100384206	3300021405	Soil	KQDPAAMARFFVVTIQGMRSMARLKSDRKALKQVAQIALAAFNSSNTASTG
Ga0210387_102733981	3300021405	Soil	QRAGELPNTAEAGALAKFFVVTIQGMRAMARLKSDRRALRQVARIALTMFDP
Ga0210387_106455712	3300021405	Soil	AERDPAALARFFVATIQGMRAMAKLNSNRKALEQVAKLALSTIG
Ga0210394_103953921	3300021420	Soil	PAALARFFVVTIQGMRAMARLKSDRRALKEVARVALAVFD
Ga0210394_108283531	3300021420	Soil	EDPTALARFFVVTIQGMRAMARLKSDRKALEQVAKVALSVFK
Ga0210384_109654321	3300021432	Soil	ADAGALAKFFVVTIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0210384_116380842	3300021432	Soil	PGTHAGALAKFFVATIQGMRAMARLKSDRRALRQVARISLAVFDR
Ga0210390_109244642	3300021474	Soil	PAALARFFVVTIQGMRAMARLNSDRKALEQVARVALSVFKSSNARL
Ga0210392_106624932	3300021475	Soil	DKHDPEALARFFVATIQGMRAMAKVNSNRKALEQVAKLALTSLS
Ga0210410_102695201	3300021479	Soil	RFFVAAIQGLRAMAKLNSNRKALEQVAHLALSRLD
Ga0222728_10279991	3300022508	Soil	GTDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0224541_10151581	3300022521	Soil	ALARFFVVTIQGMRALARLKSDRRALEEVAKVALAVLD
Ga0242653_10312872	3300022712	Soil	RTLWPSQRRGAGKFFVVTIQGMRAMARLKSDRQALRQVAKIALALFDRQ
Ga0207663_115859211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QRGCELGEKTDASGLARFFVATIQGMRAMARLKPDRRALRQVAKIALAVFDR
Ga0207783_10080381	3300026942	Tropical Forest Soil	SDKHDPVALARFFVATIQGMRAMAKVNSNRKALEQVAKLALSSLS
Ga0209010_10537143	3300027370	Forest Soil	DPAALARFFVVTIQGMRAMARLKSDRKELEQVARVALAVFNSSNTA
Ga0209418_10641002	3300027371	Forest Soil	GEVSVKQDPAALARFFVATIQGMRAMAKLNSNRNSLEQVAKLALSTIS
Ga0209733_11092661	3300027591	Forest Soil	LAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0209007_10176913	3300027652	Forest Soil	FFVVTIQGMRAMARLKSDRKELEQVARVALAVFNSSNTA
Ga0209007_11490502	3300027652	Forest Soil	FFVVTIQGMRAMARLKSDRKELEQVARVALAVFHSSNTP
Ga0209736_10216702	3300027660	Forest Soil	VRGGELGGETDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAA
Ga0209626_11338031	3300027684	Forest Soil	ALARFFVATIQGMRAMAKLNSNRKALEQVAKLALSTIG
Ga0209040_102954941	3300027824	Bog Forest Soil	LARFFVATIQGMRAMAKVNSNRKALEQVAKLALSSLS
Ga0209580_102227502	3300027842	Surface Soil	AGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0209580_105228611	3300027842	Surface Soil	ADAGALAKFFVATIQGMRAMARLKSDRRALRQVAKIALAVFDRS
Ga0209380_100107841	3300027889	Soil	GELRNGADAGALAKFFVATIQGMRAMARLKSDRGALRQVAKIALAVFDRS
Ga0209380_106866572	3300027889	Soil	GIDASALAKFFVVTIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0308309_115999112	3300028906	Soil	FFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0311371_116630471	3300029951	Palsa	AALARFFVATIQGMRAMARLKSDRKALEQIARVALAVFNSANTT
Ga0311350_107090902	3300030002	Fen	KDAKALARFFVATIQGMRSTARATSDRASLEQVARIALSTLV
Ga0311372_123013642	3300030520	Palsa	DAAALARFFVATIQGMRAMAGLKSDRKALEQIAGVALAVFNSSNTG
Ga0170823_105330232	3300031128	Forest Soil	GADAGALAKFFVATIQGMRAMARLKSDRRALRQVAKIALAVFDQ
Ga0170824_1198967161	3300031231	Forest Soil	VEASALAKFFVVTIQGMRAMARLKSDRRALRQVAKIALAMLDR
Ga0302325_132367411	3300031234	Palsa	ARFFVVTIQGMRALARLRSDRRALEGVAKVALAVLD
Ga0318541_103950522	3300031545	Soil	ARFFVATIQGMRAMAKLNSNRKSLEQVAKLALSTIS
Ga0318515_104987411	3300031572	Soil	LARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTMN
Ga0310686_1106787731	3300031708	Soil	PGTDAGALAKFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0307469_109495062	3300031720	Hardwood Forest Soil	LSGHHSGEALAKFFVVTSQGMRAMARLKFDRQALRQVAKIALALFDRQ
Ga0307468_1001947271	3300031740	Hardwood Forest Soil	EDPAALARFFVVTIQGMRAIARLHSDRKGLEQVARVVLGVFGRPD
Ga0307477_109471521	3300031753	Hardwood Forest Soil	PAALARFFAVTIQGMRAMARLKSDRKALEQVARVALAVFKPSNTS
Ga0307475_111540931	3300031754	Hardwood Forest Soil	NQGPASLARFFVATIQGMRAMARIKSDRKALESVARVALAALE
Ga0307478_105189961	3300031823	Hardwood Forest Soil	PAALARFFVATIQGMRAMAKLSSNRKALEQVAKLALSTIG
Ga0306923_101182231	3300031910	Soil	VSDKQDPAALARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTMN
Ga0310884_103083292	3300031944	Soil	LATFFAVTIQGMRAMARLKSDRRALRQVAKLALAALDAK
Ga0310910_110447971	3300031946	Soil	AALARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTMN
Ga0310909_107335302	3300031947	Soil	RFFVATIQGMRAMAKLNSNRQSLEQIARLALSTIS
Ga0310909_108726912	3300031947	Soil	ALARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTMD
Ga0306926_113669801	3300031954	Soil	ALARFFVATIQGMRAMAKVNSNRKALEEVAKLALSTIS
Ga0306926_114603821	3300031954	Soil	AMARFFVVTIQGMRAMARLKSDRKALEEVARVALGVFNPSNAVE
Ga0307471_1005643262	3300032180	Hardwood Forest Soil	GQRGSELGVETDAGALANFFVATIQGMRAMARLKSDRRALRQVARIALAVFDR
Ga0307472_1023006641	3300032205	Hardwood Forest Soil	ELSRKRDPAALARFFVVTIQGMRALARLKSDRRALEEVARVALAVLD
Ga0307472_1024274541	3300032205	Hardwood Forest Soil	VSAKRDPAALARLFVATFQGMRAMAKLNSDRKSLQQVAKLALSTIS
Ga0370483_0112501_359_472	3300034124	Untreated Peat Soil	LARFFVVTIQGMWALARLKSDRRALEEAAKVALAVLD
Ga0370515_0462249_215_328	3300034163	Untreated Peat Soil	LARFFVVTIQGMRALARLKSDRRALEEVAKVALAVLD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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