NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069215

Metagenome / Metatranscriptome Family F069215

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069215
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 65 residues
Representative Sequence MRAYRAGLLGVMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIDAVNSILSGGRG
Number of Associated Samples 115
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 43.44 %
% of genes near scaffold ends (potentially truncated) 56.45 %
% of genes from short scaffolds (< 2000 bps) 85.48 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.548 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(10.484 % of family members)
Environment Ontology (ENVO) Unclassified
(34.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.290 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.33%    β-sheet: 6.74%    Coil/Unstructured: 53.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00664ABC_membrane 13.71
PF05193Peptidase_M16_C 12.10
PF01112Asparaginase_2 8.87
PF00005ABC_tran 7.26
PF05708Peptidase_C92 6.45
PF00232Glyco_hydro_1 3.23
PF07992Pyr_redox_2 2.42
PF02852Pyr_redox_dim 2.42
PF13561adh_short_C2 1.61
PF11769DUF3313 1.61
PF03459TOBE 0.81
PF13091PLDc_2 0.81
PF14691Fer4_20 0.81
PF00069Pkinase 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1446Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamilyAmino acid transport and metabolism [E] 8.87
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.23
COG2723Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidaseCarbohydrate transport and metabolism [G] 3.23

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.55 %
UnclassifiedrootN/A6.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004114|Ga0062593_103141354All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300004156|Ga0062589_100188749All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300005093|Ga0062594_101078467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300005328|Ga0070676_10608958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300005329|Ga0070683_100377724All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300005332|Ga0066388_100009437All Organisms → cellular organisms → Bacteria7456Open in IMG/M
3300005332|Ga0066388_101637192All Organisms → cellular organisms → Bacteria → Proteobacteria1135Open in IMG/M
3300005334|Ga0068869_101144563All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005340|Ga0070689_100716131All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300005347|Ga0070668_100261451All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300005434|Ga0070709_10205507All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1397Open in IMG/M
3300005440|Ga0070705_101620667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300005445|Ga0070708_101286169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300005446|Ga0066686_10922194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300005447|Ga0066689_10607585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300005456|Ga0070678_100016931All Organisms → cellular organisms → Bacteria4676Open in IMG/M
3300005518|Ga0070699_100513362Not Available1089Open in IMG/M
3300005536|Ga0070697_100746442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium865Open in IMG/M
3300005539|Ga0068853_101645655All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300005569|Ga0066705_10369046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium903Open in IMG/M
3300005841|Ga0068863_101881526All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005843|Ga0068860_100654155All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300006173|Ga0070716_101611029All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300006603|Ga0074064_11743950All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300006846|Ga0075430_101454234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300006871|Ga0075434_101209244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300006894|Ga0079215_10975050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300009012|Ga0066710_100639684All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300009038|Ga0099829_10733203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium821Open in IMG/M
3300009089|Ga0099828_10195287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1805Open in IMG/M
3300009090|Ga0099827_10460872All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1090Open in IMG/M
3300009100|Ga0075418_10177547All Organisms → cellular organisms → Bacteria2268Open in IMG/M
3300009553|Ga0105249_10475774All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300010046|Ga0126384_10039855All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes3176Open in IMG/M
3300010046|Ga0126384_10422807All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300010047|Ga0126382_11130182All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300010359|Ga0126376_11664444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300010361|Ga0126378_11349028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300010391|Ga0136847_12709792All Organisms → cellular organisms → Bacteria4403Open in IMG/M
3300010399|Ga0134127_11216919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300010400|Ga0134122_12861947All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300011269|Ga0137392_11375902All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300012019|Ga0120139_1217544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300012045|Ga0136623_10149116All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1014Open in IMG/M
3300012189|Ga0137388_11206106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300012199|Ga0137383_10430451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium967Open in IMG/M
3300012201|Ga0137365_10134150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1861Open in IMG/M
3300012204|Ga0137374_10580403All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300012210|Ga0137378_10423201All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300012354|Ga0137366_10113127All Organisms → cellular organisms → Bacteria2053Open in IMG/M
3300012532|Ga0137373_10441424All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1004Open in IMG/M
3300012684|Ga0136614_10005369All Organisms → cellular organisms → Bacteria8539Open in IMG/M
3300012930|Ga0137407_11101231All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300012958|Ga0164299_10642758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300012958|Ga0164299_11699519All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012986|Ga0164304_11038684Not Available651Open in IMG/M
3300013306|Ga0163162_12089255All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300013503|Ga0120127_10087133All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300015080|Ga0167639_1026179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300015085|Ga0167632_1004874All Organisms → cellular organisms → Bacteria1959Open in IMG/M
3300015090|Ga0167634_1030304All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10772Open in IMG/M
3300015164|Ga0167652_1020559All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae1347Open in IMG/M
3300015190|Ga0167651_1083451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300015200|Ga0173480_10265263All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300015359|Ga0134085_10192754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300015371|Ga0132258_11899012All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300016422|Ga0182039_11660929All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300017936|Ga0187821_10253923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300017944|Ga0187786_10162458All Organisms → cellular organisms → Bacteria → Proteobacteria817Open in IMG/M
3300017959|Ga0187779_10035881All Organisms → cellular organisms → Bacteria2865Open in IMG/M
3300017959|Ga0187779_10114532All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300017966|Ga0187776_10926158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300017973|Ga0187780_10080323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2241Open in IMG/M
3300017974|Ga0187777_10092279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1981Open in IMG/M
3300018029|Ga0187787_10124257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium852Open in IMG/M
3300018058|Ga0187766_10468423Not Available844Open in IMG/M
3300018064|Ga0187773_10059842All Organisms → cellular organisms → Bacteria1779Open in IMG/M
3300018066|Ga0184617_1136409All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium710Open in IMG/M
3300018077|Ga0184633_10006942All Organisms → cellular organisms → Bacteria → Acidobacteria5278Open in IMG/M
3300018084|Ga0184629_10019723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2774Open in IMG/M
3300018089|Ga0187774_10872803All Organisms → cellular organisms → Bacteria → Proteobacteria615Open in IMG/M
3300018433|Ga0066667_10346468All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300020006|Ga0193735_1084572All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium903Open in IMG/M
3300025324|Ga0209640_10021992All Organisms → cellular organisms → Bacteria → Acidobacteria5565Open in IMG/M
3300025899|Ga0207642_10914383All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300025905|Ga0207685_10670615All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300025910|Ga0207684_11699636All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300025922|Ga0207646_10402222Not Available1236Open in IMG/M
3300025937|Ga0207669_10840588All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300025942|Ga0207689_11039619All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300025960|Ga0207651_11988128All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026088|Ga0207641_11109217All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300026121|Ga0207683_10564341All Organisms → cellular organisms → Bacteria → Proteobacteria1053Open in IMG/M
3300026542|Ga0209805_1210896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium826Open in IMG/M
3300027678|Ga0209011_1009549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3266Open in IMG/M
3300027775|Ga0209177_10256925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300027875|Ga0209283_10392962All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300027907|Ga0207428_10113289All Organisms → cellular organisms → Bacteria2085Open in IMG/M
3300031231|Ga0170824_112569783All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300031720|Ga0307469_10207929All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300031805|Ga0318497_10124543All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300031820|Ga0307473_10736858Not Available696Open in IMG/M
3300031873|Ga0315297_11659141All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300031954|Ga0306926_11321662All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300031965|Ga0326597_10864918All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300032180|Ga0307471_100303901All Organisms → cellular organisms → Bacteria1684Open in IMG/M
3300032180|Ga0307471_101533210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium824Open in IMG/M
3300032180|Ga0307471_101819404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium760Open in IMG/M
3300032180|Ga0307471_103774689All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300032205|Ga0307472_100799535All Organisms → cellular organisms → Bacteria → Proteobacteria861Open in IMG/M
3300032770|Ga0335085_10001558All Organisms → cellular organisms → Bacteria47422Open in IMG/M
3300032770|Ga0335085_10500090All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1388Open in IMG/M
3300032770|Ga0335085_10606618Not Available1231Open in IMG/M
3300032782|Ga0335082_10002313All Organisms → cellular organisms → Bacteria20500Open in IMG/M
3300032828|Ga0335080_11255067All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300033482|Ga0316627_100686059All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300033513|Ga0316628_103978335All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300033550|Ga0247829_11794512All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300033815|Ga0364946_081670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300034123|Ga0370479_0097686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense775Open in IMG/M
3300034165|Ga0364942_0093859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300034176|Ga0364931_0308708All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland8.06%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.26%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.03%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.23%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.23%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.42%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.42%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.61%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.61%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300015080Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300015085Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015090Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)EnvironmentalOpen in IMG/M
3300015164Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015190Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034123Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24036J26619_1008515213300002128Corn, Switchgrass And Miscanthus RhizosphereLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0062593_10314135413300004114SoilPAPEWMRAYRAGLLGLPFEDRDAVLRFEFQGDSVRFSAQEGEVSKLRRVLERRIESVNSILSGGRGPSSGG*
Ga0062589_10018874923300004156SoilMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGILSGGRGAVPSP*
Ga0062594_10107846723300005093SoilMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGILSGGRGASPTP*
Ga0070676_1060895813300005328Miscanthus RhizosphereTDGRSFFRIRLDNEPSPEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0070683_10037772423300005329Corn RhizosphereGRSYYRVRLDGEPSPEWMRAYRAGLLGLLPEDREIVLRFEFQGDSVRFSAADAEVARVRRVLEQRVHAVNTILSGGRAVDQ*
Ga0066388_10000943743300005332Tropical Forest SoilMRAYRAGLLGLMPEDREAVLRLEFQGDSVRFAATDAEIGRLRKALERRLESVNSILSGGRGA*
Ga0066388_10163719223300005332Tropical Forest SoilMRAYRAGLLGVVPEDRDAVMRFEFQGDSVRFAATDPEVGRLRRVLERRLDSVNSILSGGRGA*
Ga0068869_10114456323300005334Miscanthus RhizospherePSPEWMRAYRAGLLGLLPEDREIVLRFEFQGDSVRFSAADAEVARVRRVLEQRVHAVNTILSGGRAVDQ*
Ga0070689_10071613123300005340Switchgrass RhizosphereEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0070668_10026145113300005347Switchgrass RhizosphereGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0070709_1020550713300005434Corn, Switchgrass And Miscanthus RhizosphereMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAGEAEVGRMRRVLQGRVDAVNGILSGGRG*
Ga0070705_10162066723300005440Corn, Switchgrass And Miscanthus RhizosphereSPEWMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGILSGGRGASPTP*
Ga0070708_10128616923300005445Corn, Switchgrass And Miscanthus RhizosphereMRAYRAGLLGLMPEDRDAVMRFEFVGDAVRFAAVDSEVGRLRRVLEQRLQSVNGILSGGRSVEP*
Ga0066686_1092219413300005446SoilMRAYRAGMLGLMPEDRDAVLRFEFQGDSVRFPAQDAEVGRMRRVLQSRVDAVNSILSGGRA*
Ga0066689_1060758513300005447SoilMRAYRAGLLGVMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNSILSGGRS*
Ga0070678_10001693113300005456Miscanthus RhizosphereSPEWMRAYRAGLLGLMPDDRDVVLRFEFQGDSVRFVAADAEVGKVRRLLEQRIQAVNGILSGGRAVEP*
Ga0070699_10051336223300005518Corn, Switchgrass And Miscanthus RhizosphereRARLDSEPSPEWMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLQSRVDAVNSILSGGRG*
Ga0070697_10074644223300005536Corn, Switchgrass And Miscanthus RhizosphereMRAYRAGMLGLLPEDRDAVLRMEFQADSVRFSAAENEVGKMRKVLERRLDAVNSILSGGRGGGAPQG*
Ga0068853_10164565513300005539Corn RhizosphereLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0066705_1036904623300005569SoilAGILGMTREDRDAILRFEFQGDSVRVAAGDSEIGKLRRVLERRIDAVNSILSGGRGPSPTP*
Ga0068863_10188152613300005841Switchgrass RhizosphereEPSPEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0068860_10065415523300005843Switchgrass RhizosphereVRLDGEPSPEWMRAYRAGLLGLLPEDREIVLRFEFQGDSVRFSAADAEVARVRRVLEQRVHAVNTILSGGRAVDQ*
Ga0070716_10161102913300006173Corn, Switchgrass And Miscanthus RhizosphereMRAYRAGMLGLMPEDREAVLRFEFQGDSVRFPAGENEVGRLRKVLERRLDAVNSILSGGRSNPS*
Ga0074064_1174395023300006603SoilRVRLDGEPSPEWMRAYRAGMLGLMPEDREAVLRFEFQGDSVRFAAADAEVPKLRRVLEKRVEAVNGILSGGRSISS*
Ga0075430_10145423413300006846Populus RhizosphereMRAYRAGILGMTREDREAVLRFEFQGASVRVSAAEGEIGKLRRVFERRVDAVNGILSGGRGAVPTP*
Ga0075434_10120924423300006871Populus RhizosphereMRAYRAGLLGVVPEDRDAVMRFEFQGDSVRFAATDPEVGRLRRVLERRLDSVNSILSGGRGGS*
Ga0079215_1097505023300006894Agricultural SoilMRAYRAGILGMTREDREAVLRFEFQGASVRVAAVEGEIGKLRRVFERRVDAVNGIL
Ga0066710_10063968433300009012Grasslands SoilMRAYRAGLLGVMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNSILSGGR
Ga0099829_1073320313300009038Vadose Zone SoilMRAYRAGLLGVMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRVEAVNSILSGGRS*
Ga0099828_1019528723300009089Vadose Zone SoilMLDSEPSPEWMRAYRAGLLGVPPEDRDAVLRFEFQGGSVRFSAAEGEVSRLRRVLERRMDAVNSILSGGR*
Ga0099827_1046087213300009090Vadose Zone SoilMRAYRAGLLGVVPEDRDAVLRFEFQGGSVRFPATESEVGRLRRVLERRLESVNWILSGGRGGPPPGS*
Ga0075418_1017754713300009100Populus RhizosphereIRLDNEPSPEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0105249_1047577413300009553Switchgrass RhizosphereGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0126384_1003985513300010046Tropical Forest SoilMRAYRAGLLGVPPEDRDAVMRFEFQGDSVRFAAAEGEVSRLRRVLERRMDAVNSILSGGR
Ga0126384_1042280723300010046Tropical Forest SoilMRAYRAGLLGLMPEDREAVLRLEFQGDSVRCAATDAELGRLRKVLERRLESVNSILSGGRGA*
Ga0126382_1113018223300010047Tropical Forest SoilPEWMRAYRAGLLGVVAEDRDAVMRFEFQGDSVRFAATDPEVGRLRRVLERRLDSVNSILSGGRGA*
Ga0126376_1166444413300010359Tropical Forest SoilMRAYRAGLLGVVAEDRDAVMRFEFQGDSVRFAANDPEVGRLRRVLERRLDSVNSILSGGRGA*
Ga0126378_1134902823300010361Tropical Forest SoilMRAYRAGLLGLMPEDREAVLRLEFQGDSVRFAATDAEIGRLRKALERRLESVNSILSGGRCA*
Ga0136847_1270979223300010391Freshwater SedimentMRAYRAGLLGLMPEDREAVLRLEFQGDSVRFAAAEAEVARLRRVLERRLEAVNGILSGGRS*
Ga0134127_1121691913300010399Terrestrial SoilMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAV
Ga0134122_1286194713300010400Terrestrial SoilPEWMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAGDAEVGRMRRVLQGRVDAVNGILSGGRG*
Ga0134123_1360906323300010403Terrestrial SoilPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP*
Ga0137392_1137590223300011269Vadose Zone SoilMRAYRAGLLGVPPEDRDAVMRFEFQGGSVRFAAAEGEVSRLRRVLERRMDAVNSILSGGR
Ga0120139_121754423300012019PermafrostDGEPSPEWMRAYRAGLLGVMPEDRDAVMRFEFVGDAVRFSASDAEVGRLRRVLEQRVQSVNGILSGGRPVEQ*
Ga0136623_1014911613300012045Polar Desert SandRAYRAGLLGLTAEDRDVVLRFEFQGDSVRFTAGDGEVGKVRRVLERRVESVNSILSGGRGPSPQA*
Ga0137388_1120610623300012189Vadose Zone SoilMLDSEPSPEWMRAYRAGLLGVPPEDRDAVMRFEFQGGSVRFAAAEGEVSRLRRVLERRMDAVNSILSGGR*
Ga0137383_1043045113300012199Vadose Zone SoilMLDSEPSPEWMRAYRAGLLGVPPEDRDAVMRLEFQGGSVRFAAAEGEVSRLRRVLERRMDAVNSILSGGR*
Ga0137365_1013415013300012201Vadose Zone SoilMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAADAEVGRMRRVLQSRVDAVNSILSGGRG*
Ga0137374_1058040323300012204Vadose Zone SoilMRAYRAGLLGLMPDDREAVLRLEFDGASVRFAALDGEVGRLRRVLQQRLDAVNSILSGGRS*
Ga0137378_1042320123300012210Vadose Zone SoilMRAYRAGLLGVMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIDAVNSILSGGRG*
Ga0137366_1011312723300012354Vadose Zone SoilMLDSEPSPEWMRAYRAGLLGVPPEDRDAVLRLEFQGGSVRFAAAEGEVSRLRRVLERRMDAVNSILSGGR*
Ga0137373_1044142413300012532Vadose Zone SoilGLLGVMPEDRDAVLRFEFQGDGVRFPAQDAEVGRLRRVLERRIEAVNSILSGGRS*
Ga0136614_1000536943300012684Polar Desert SandMRAYRAGILGMPAEDRDAVMRFEFQGDGVRFAAVETEVTRLRRVLERRVDAVNSILSGGRGPVEPT*
Ga0137407_1110123123300012930Vadose Zone SoilEWMRAYRAGILGMTRDDREAILRFEFQGDSVRIAAADAEIGKLRRVLERRIDAVNSILSGGRGVAPAP*
Ga0164299_1064275823300012958SoilYRAGILGLTREDHEAIVRFEFQGDSVRVAASDSEIGKLRRALERRVEAVNAILSGGRSAAPAP*
Ga0164299_1169951923300012958SoilPEWMRAYRAGMLGLMPEDRDAVLRFEFQGDSVRFAAADAEVGRMRRVLQGRVDAVNSILSGGRG*
Ga0164304_1103868423300012986SoilVRALSGGIPGPVPEGRAAGLRFEFQGDSVRFSAAEGEVGRMRRVLQSRVDAVNSILSGGRS*
Ga0163162_1208925523300013306Switchgrass RhizosphereMRAYRAGLLGLMPDDRDVVLRFEFQGDSVRFVAADAEVGKVRRLLEQRIQAVNGILSGGRAVEP*
Ga0120127_1008713323300013503PermafrostRIRLDGEPSPEWMRAYRAGLLGLLPEDRDAVMRFEFVGDAVRFAAAVAEVGRLRRVLEQRVHSVNGILSGGRPVEP*
Ga0167639_102617923300015080Glacier Forefield SoilMRAYRAGLLGLTSEDRDAVLRFEFVGDGVRFAATDAEVGKLRRVLEQRVQAVNGILSGGRPVDS*
Ga0167632_100487423300015085Glacier Forefield SoilMRAYRAGMLGLMPEDRDAVLRMEFQGDSVRFSASEGEVGKMRKVLERRLDAVNSILSGGRGGSAPQG*
Ga0167634_103030423300015090Glacier Forefield SoilFRARLDSEPSPEWMRAYRAGMLGLMPEDREIVLRFEFQGDSVRFPAADNEVGRVRKVLERRLEAVNSILSGGRGPAPQG*
Ga0167652_102055933300015164Glacier Forefield SoilFRARLDSEPSPEWMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAGDAEVGRMRRVLQGRVDAVNGILSGGRG*
Ga0167651_108345113300015190Glacier Forefield SoilEPSPEWMRAYRAGMLGLMPEDRDAVLRMEFQGDSVRFSAAEGEVGKLRKALERRLDAVNTILSGGRGGSAPQG*
Ga0173480_1026526323300015200SoilPRLRGPAATVVTDMPCRLDGEPSPEWMRAYRAGLLGLLPEDREIVLRFEFQGDSVRFSAGDAEVQRVRRVLEQRIQAVNGILSGGRAVEP*
Ga0134085_1019275423300015359Grasslands SoilMRAYRAGLLGLVPEDRDAVMRFEFQGDSVRFPAQDAEVGRMRRVLQSRVDAV
Ga0132258_1189901233300015371Arabidopsis RhizosphereRAGMLGLMPEDREAVLRFEFQGDSVRFPANETEVSRLRKVLERRLDAVNSILSGGRSNPS
Ga0182039_1166092913300016422SoilGEPSPEWMRAYRAGLLGLVPEDRDAVLRFEFQGDSVRIAATDAEVGKLRRVLERRVEAVNGILSGGRSITP
Ga0187821_1025392323300017936Freshwater SedimentMRAYRAGLLGVVAEDRDAVMRFEFQGDSVRFAAADGEVPRLRRVLERRLDAVNGILSGGR
Ga0187786_1016245823300017944Tropical PeatlandEWMRAYRAGLLGVTPEDRDAVMRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0187779_1003588133300017959Tropical PeatlandMRAYRAGMLGLMPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIDAVNTILSGGRSGPSETR
Ga0187779_1011453213300017959Tropical PeatlandTPSPEWMRAYRAGLLGLMPEDRDAVLRLEFDGNSVRFAAQDGEVGRIRRALQQRLDAVNTILSGGRG
Ga0187776_1092615813300017966Tropical PeatlandMRAYRAGLLGVTPEDRDAVMRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAAAHAALD
Ga0187780_1008032333300017973Tropical PeatlandMRAYRAGLLGLMPEDRDAVLRLEFDGNSVRFAAQDGEVGRIRRALQQRLDAVNTILSGGR
Ga0187777_1009227923300017974Tropical PeatlandMRAYRAGLLGLMPEDRDAVLRLEFDGASVRFAAQDGEVGRIRRALQQRLDAVNTILSGGR
Ga0187787_1012425723300018029Tropical PeatlandMRAYRAGLLGVTPEDRDAVMRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0187766_1046842313300018058Tropical PeatlandPEWMRAYRAGLLGLMPEDRDAVLRLEFDGNSVRFAAQDGEVGRIRRALQQRLDAVNTILSGGRG
Ga0187773_1005984213300018064Tropical PeatlandPEWMRAYRAGLLGVTPEDRDAVMRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0184617_113640923300018066Groundwater SedimentILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGILSGGRGASPTP
Ga0184633_1000694223300018077Groundwater SedimentMRAYRAGTLGLLPEDRDAVLRFEFQGDSVRFAASDGEVSRLRRVLERRVEAVNAILSGGR
Ga0184629_1001972313300018084Groundwater SedimentRIRLDGEPSPEWMRAYRAGLLGLVAEDRDAVLRFEFQGDSVRFAAADAEVVRLRRVLEKRVEAVNGILSGGRSISS
Ga0187774_1087280323300018089Tropical PeatlandRAGLLGVTPEDRDAVMRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0066667_1034646823300018433Grasslands SoilAGILGMTREDRDAILRFEFQGDSVRVAAGDSEIGKLRRVLERRIDAVNSILSGGRGPSPT
Ga0193735_108457213300020006SoilMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGILSGGRGASPTP
Ga0209640_1002199233300025324SoilMRAYRAGILGMTREDREAVLRFEFQGASVRVSAGEGEIGKLRRVFERRVDAVNGILSGGRGASPTP
Ga0207642_1091438313300025899Miscanthus RhizosphereWLRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP
Ga0207685_1067061523300025905Corn, Switchgrass And Miscanthus RhizosphereGILGLLPEDRDAVLRFEFQGDSVRFAAGDAEVGRMRRVLQGRVDAVNGILSGGRG
Ga0207684_1169963613300025910Corn, Switchgrass And Miscanthus RhizosphereDSEPSPEWMRAYRAGLLGVPPEDRDAVLRFEFQGGSVRFSAAEGEVSRLRRVLERRMEAVNSILSGGR
Ga0207646_1040222213300025922Corn, Switchgrass And Miscanthus RhizosphereYRAGILGLLPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLQSRVDAVNSILSGGRG
Ga0207669_1084058823300025937Miscanthus RhizosphereLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP
Ga0207689_1103961923300025942Miscanthus RhizospherePSPEWMRAYRAGLLGLLPEDREIVLRFEFQGDSVRFSAADAEVARVRRVLEQRVHAVNTILSGGRAVDQ
Ga0207651_1198812813300025960Switchgrass RhizosphereYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVE
Ga0207641_1110921723300026088Switchgrass RhizosphereEPSPEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP
Ga0207683_1056434113300026121Miscanthus RhizosphereSYFRVRLDGEPSPEWMRAYRAGLLGLMPEDRDAVMRFEFVGDAVRFAAVDSEVGRLRRVLEQRVQSVNGILSGGRPVEP
Ga0209805_121089623300026542SoilEWMRAYRAGILGMTRDDRDAILRFEFQGDSVRVAAADSEIGKLRRVLERRIDAVNSILSGGRGPSPTP
Ga0209011_100954943300027678Forest SoilMRAYRAGMLGLLPEDRDAVLRMEFQADSVRFSAAENEVGKMRKVLERRLDAVNSILSGGRGGGAPQG
Ga0209177_1025692523300027775Agricultural SoilLDGEPSPEWMRAYRAGLLGLMPDDRDIVMRFEFQGDSVRFQAADAEVGKIRRVLEQRIQAVNVILSGGRAVDQ
Ga0209283_1039296213300027875Vadose Zone SoilEPSPEWMRAYRAGLLGVPPEDRDAVLRFEFQGGSVRFSAAEGEVSRLRRVLERRMDAVNSILSGGR
Ga0207428_1011328913300027907Populus RhizosphereFRIRLDNEPSPEWMRAYRAGLLGLLPEDRDAVMRFEWQGASVLVAAGDAEVGRLRRVLEQRVQAVNHILSGGRAVEP
Ga0170824_11256978323300031231Forest SoilGEPSPEWMRAYRAGLLGLVPEDRDAVLRFEFQGDTVRIGATDAEFGKLRRVLERRVEAVNGILSGGRSISS
Ga0307469_1020792923300031720Hardwood Forest SoilMRAYRAGLLGVVPEDRDAVMRFEFQGDSVRFAATDPEVGRLRRVLERRLDSVNSILSGGRGGS
Ga0318497_1012454333300031805SoilGLMPEDRDAVLRLEFDGNSVRFAAQDSEVGRIRRALQQRLDAVNTILSGGRG
Ga0307473_1073685813300031820Hardwood Forest SoilARLDSEPSPEWMRAYRAGILGLLPEDRDAVLRFEFQGDSVRFAAGDAEVGRMRRVLQGRVDAVNGILSGGRG
Ga0315297_1165914113300031873SedimentSPEWMRAYRAGLLGLVAEDRDAVLRFEFQGDSVRFAAADAEVARLRRVLEKRVEAVNGILSGGRSISS
Ga0306926_1132166223300031954SoilMRAYRAGLLGLMPEDRDAVLRLEFDGNSVRFAAQDSEVGRIRRALQQRLDAVNTILSGGR
Ga0326597_1086491813300031965SoilPSPEWMRAYRAGILGMSREDREAVLRFEFQGDSVRVAATDAEVGKLRRVLERRIDAVNSILSGGRSVSPTA
Ga0307471_10030390123300032180Hardwood Forest SoilMRAYRAGLLGLMPEDRDAVLRFEFDGGSVRFAALDGEVGRLRRVLQQRLDAVNSILSGGR
Ga0307471_10153321013300032180Hardwood Forest SoilMRAYRAGLLGLMPEDRDAVLRLEFDGGSVRFAAQDAEVGRIRRALQQRLDAVNTILSGGR
Ga0307471_10181940413300032180Hardwood Forest SoilMRAYRAGILGLTREDREAILRFEFQGDSVRVAASDGEIGKLRRVLERRVEAVNGIL
Ga0307471_10377468913300032180Hardwood Forest SoilAYRAGMLGLLPEDRDAVLRFEFQGDSVRFAAQEGEVGRMRRVLQSRVDAVNGILSGGRG
Ga0307472_10079953513300032205Hardwood Forest SoilRLDSEPAPEWMRAYRAGMLGLTPEDRDAVLRFEFQGDSVRFVAQEGEVGRLRRVLERRIESVNTILSGGRGPSSS
Ga0335085_10001558393300032770SoilVYFRARLDSEPAPEWMRAYRAGLLGLTPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0335085_1050009023300032770SoilMRAYRAGMLGLTPEDRDAVLRFEFQGDSVRFAAADAEVARLRRVLERRVEAVNSILSGGRSGPGGGR
Ga0335085_1060661833300032770SoilGRTYFRVYLDSTPSPEWMRAYRAGLLGLMPEDRDAVLRLEFDGGSVRFAAQDAEVGRIRRALQQRLDAVNTILSGGRG
Ga0335082_1000231383300032782SoilMRAYRAGLLGLTPEDRDAVLRFEFQGDSVRFAAQDAEVGRLRRVLERRIEAVNTILSGGRGPASGG
Ga0335080_1125506723300032828SoilMRAYRAGMLGLLPEDRDAVLRFEFQGDSVRFAASETEVAKLRRVLERRVEAVNAILSGGRSGPTGGR
Ga0316627_10068605923300033482SoilIRFDNEPSPEWMRAYRAGMLGLMPDDRDAVLRFEFQGDSVRFAASEAEVPKLRRVLEQRVQAVNGILSGGRAVEP
Ga0316628_10397833523300033513SoilARLDSEPAPEWMRAYRAGLLGVTAEDRDAVLRFEFQGDSVRFAAQEAEVGRLRKVLERRIEAVNAILSGGRGPAGGR
Ga0247829_1179451213300033550SoilYRAGLLGLMPEDRDAVLRFEFQGDSVRFSASDAEVGKLRRVLEQRVQAVNGILSGGRPVE
Ga0364946_081670_224_4243300033815SedimentMRAYRAGILGMTREDREAVLRFEFQGASVRVSTAEGEIGKLRRVFERRVDAVNGILSGGRGAAPTP
Ga0370479_0097686_2_1963300034123Untreated Peat SoilMRAYRAGMLGLLPEDRDAVLRFEFQGDSVRFVAGEAEVAKLRRVLEQRVQAVNGILSGGRAVEP
Ga0364942_0093859_85_2883300034165SedimentMRAYRAGMLGLTPEDRDAVLRFEFQGDSVRFAAAEAEVARLRRVLERRVEAVNAILSGGRSGPGGGR
Ga0364931_0308708_22_1833300034176SedimentMPEDRDAVMRFEFVGDAVRFAAVDSEVGRLRRVLEQRVQSVNGILSGGRPVES

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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