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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F069083 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 124 |
| Average Sequence Length | 47 residues |
| Representative Sequence | MNVIFVGRKSGRVKQFDLRHPLVVAAAVLTVLGIVGGAFSVGVGLGA |
| Number of Associated Samples | 104 |
| Number of Associated Scaffolds | 124 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 82.26 % |
| % of genes near scaffold ends (potentially truncated) | 96.77 % |
| % of genes from short scaffolds (< 2000 bps) | 92.74 % |
| Associated GOLD sequencing projects | 98 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.53 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (79.032 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.581 % of family members) |
| Environment Ontology (ENVO) | Unclassified (29.839 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (60.484 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 29.33% β-sheet: 13.33% Coil/Unstructured: 57.33% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 124 Family Scaffolds |
|---|---|---|
| PF05258 | DciA | 72.58 |
| PF03331 | LpxC | 12.10 |
| PF12327 | FtsZ_C | 1.61 |
| PF01648 | ACPS | 0.81 |
| PF14450 | FtsA | 0.81 |
| COG ID | Name | Functional Category | % Frequency in 124 Family Scaffolds |
|---|---|---|---|
| COG5512 | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives) | General function prediction only [R] | 72.58 |
| COG0774 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | Cell wall/membrane/envelope biogenesis [M] | 12.10 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 79.03 % |
| All Organisms | root | All Organisms | 20.97 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 22.58% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 11.29% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 8.87% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 7.26% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.45% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 5.65% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.84% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 4.84% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 4.84% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 3.23% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 2.42% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 2.42% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.61% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.61% |
| Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 1.61% |
| Host-Associated | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated | 1.61% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.81% |
| Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil | 0.81% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.81% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.81% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.81% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.81% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.81% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.81% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.81% |
| Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.81% |
| Moss Associated | Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated | 0.81% |
| Visualization |
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| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001166 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 | Environmental | Open in IMG/M |
| 3300001356 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 | Environmental | Open in IMG/M |
| 3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
| 3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
| 3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004631 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
| 3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
| 3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
| 3300006055 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 | Environmental | Open in IMG/M |
| 3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
| 3300006102 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013 | Environmental | Open in IMG/M |
| 3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
| 3300009500 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG | Host-Associated | Open in IMG/M |
| 3300009522 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG | Environmental | Open in IMG/M |
| 3300009660 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 | Environmental | Open in IMG/M |
| 3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
| 3300013314 | Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis | Host-Associated | Open in IMG/M |
| 3300014167 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG | Environmental | Open in IMG/M |
| 3300014169 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG | Environmental | Open in IMG/M |
| 3300014657 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG | Environmental | Open in IMG/M |
| 3300015160 | Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river)) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300017995 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1 | Environmental | Open in IMG/M |
| 3300018035 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10 | Environmental | Open in IMG/M |
| 3300018040 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150 | Environmental | Open in IMG/M |
| 3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
| 3300019889 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
| 3300020027 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1 | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300024222 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32 | Environmental | Open in IMG/M |
| 3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
| 3300024275 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15 | Environmental | Open in IMG/M |
| 3300025625 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026217 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes) | Environmental | Open in IMG/M |
| 3300026291 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027574 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027633 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027692 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027737 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027795 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027854 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes) | Environmental | Open in IMG/M |
| 3300027855 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027860 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300027965 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028783 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029883 | I_Bog_E2 coassembly | Environmental | Open in IMG/M |
| 3300029911 | III_Bog_N2 coassembly | Environmental | Open in IMG/M |
| 3300029915 | III_Bog_E1 coassembly | Environmental | Open in IMG/M |
| 3300029945 | I_Bog_N2 coassembly | Environmental | Open in IMG/M |
| 3300029953 | II_Bog_E3 coassembly | Environmental | Open in IMG/M |
| 3300029992 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3 | Environmental | Open in IMG/M |
| 3300029997 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3 | Environmental | Open in IMG/M |
| 3300030058 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1 | Environmental | Open in IMG/M |
| 3300030518 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2 | Environmental | Open in IMG/M |
| 3300030524 | II_Palsa_N3 coassembly | Environmental | Open in IMG/M |
| 3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300030659 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2) | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031232 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3 | Environmental | Open in IMG/M |
| 3300031236 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1 | Environmental | Open in IMG/M |
| 3300031261 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1 | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2 | Environmental | Open in IMG/M |
| 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12694J13545_10223102 | 3300001166 | Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAVLLVLAIVGTAFSIGVGLG |
| JGI12269J14319_102935292 | 3300001356 | Peatlands Soil | MNVIFVGRQSGRVKQFDLRQPLVIIAACAVVLMIVGGAFSIGMGLGVR |
| JGI12053J15887_105197591 | 3300001661 | Forest Soil | MNVIFVGRKSGRVKEFDLRHPMIVAAAVLMVIGIVGGAFSVGV |
| JGIcombinedJ26739_1005316384 | 3300002245 | Forest Soil | MNVIFVGRKSGRVKQFDLQHPVVVAAALIMVLGIVGGAFSVGVG |
| JGI25616J43925_100537001 | 3300002917 | Grasslands Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAVLMVFAIVGGAFSVGVGLGARHSANPIDQLGNW |
| JGIcombinedJ51221_104566232 | 3300003505 | Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAALLVLAIVGTAFSIGVGLGARHSG |
| Ga0062385_109856971 | 3300004080 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLQHPLVVGAAVLMVLAIVGGAFS |
| Ga0062384_1007684152 | 3300004082 | Bog Forest Soil | MNVILVGRKSGRVKQFDLHHPIVLSVAVMLVLGILGAAFSVGMGLGARHVGNPID |
| Ga0062389_1017017891 | 3300004092 | Bog Forest Soil | MNVIFVGRKSGRVKQLDLRHPLILAAAAALVFLVVGGAFSVGVGLGARH |
| Ga0062389_1045083631 | 3300004092 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLRHPLIMSAGALVVLAFLGTAFS |
| Ga0058899_100554882 | 3300004631 | Forest Soil | MNVIFVGRKTGQVKQLDLRHPLVIAAAVAIVFGVVGAPFRSA* |
| Ga0062388_1016920951 | 3300004635 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMPVAVLVVLGILGAAFSVGMSLGSRH |
| Ga0070764_108221412 | 3300005712 | Soil | MNVIFVGRKSGRVKQFDLRHPVVVTAAVMLVVGIVGGAFSFGMNLGARHGTG |
| Ga0070764_110459531 | 3300005712 | Soil | MNVIFVGRKSGRVKQLDLRHPLVVGAAVALVLVIVGGAFSIGMGLGSRNKAG |
| Ga0075028_1007319121 | 3300006050 | Watersheds | MNVIFVGRKSGRVKQFDLRHPLLVTVGVLSVLGIVGGAFSAGIGLG |
| Ga0097691_11689282 | 3300006055 | Arctic Peat Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAGLMVLGIVGGAFSMGVG |
| Ga0075026_1000399111 | 3300006057 | Watersheds | MNIIFVGRNPGSVKQLDLRHPLVISAAIAIVLAIVGGAFSIGMSLGGRGGGTYPLD |
| Ga0075015_1008785391 | 3300006102 | Watersheds | MNVIFVGRNPGSVKQLDLRQPLVILAAMAIVFAIVGGAFSIGMS |
| Ga0075030_1015798541 | 3300006162 | Watersheds | MNVIFVGRKTGRVKQLDLRHPAVVATAAALVLGVVGIA |
| Ga0070765_1011075041 | 3300006176 | Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAVILVLGIVGGAFSVGIGLGA |
| Ga0075021_109779341 | 3300006354 | Watersheds | MNVIFVGRKTGRVKQLDLRHPLVLGTAVALVFFIVGGAF |
| Ga0116229_114168871 | 3300009500 | Host-Associated | MNVILVGRKTGRISQFDLRHPLVVAAALALVVGVVGGAFSIGVGLGARHRGA |
| Ga0116218_10867941 | 3300009522 | Peatlands Soil | MNVIFVGRKTGRVKQLDLRHPMVLAAAFALVLSIVGGAFSIGMSLGSRHRSTNPVD |
| Ga0105854_13855201 | 3300009660 | Permafrost Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAFILVLGIVGGAFSVGVGLGARHTTS |
| Ga0074046_101464233 | 3300010339 | Bog Forest Soil | MNVIFVGRKSGRVKQLDLRHPLVIGAALALVFGIVGGAFSIGV |
| Ga0150983_110831702 | 3300011120 | Forest Soil | MNVIFVGRKTGQVKQLDLRHPLVVTAALTLVFGIVGGAFSVGIGLGVRHHVANPIDQ |
| Ga0137393_104744623 | 3300011271 | Vadose Zone Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIVGGAFS |
| Ga0137361_111350111 | 3300012362 | Vadose Zone Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIVGGAFSIGVGLGVRHHAANPI |
| Ga0137398_103319863 | 3300012683 | Vadose Zone Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIVGGAFSIGV |
| Ga0175859_11112321 | 3300013314 | Moss Associated | MNVIFVGRKTGRVKQLDLRHPLVVAAALAVVVCVVVGAFSIGVGLGS |
| Ga0181528_108664852 | 3300014167 | Bog | MNVIFVGRKSGRIKQFDLHHPVVVAAGLLLVLGIVGGAFSVGVGLGA |
| Ga0181531_105811141 | 3300014169 | Bog | MNVIFVGRRSGRVKQLNLRHPLIIASAAALVFAVVGGAFSVGV |
| Ga0181522_104926941 | 3300014657 | Bog | MNVIFVGPKSGRVRQLNLRHPLVLAAAAALVFLVVGVAFSVGVGLGARHRGAPRG |
| Ga0167642_10039241 | 3300015160 | Glacier Forefield Soil | MNVIFVGRKSGRVKQFDLRHPVIMSGGALLILGILGVAFSIGVGLGARHS |
| Ga0137403_106645101 | 3300015264 | Vadose Zone Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAFILVLGIIGGAFSVGVGLGARH |
| Ga0187816_105015781 | 3300017995 | Freshwater Sediment | MNVIFVGRKSGRVKQLDLRHPLVVAAAVAVVFGIVGGAFSIGVSLGIQHRGPNPLDQ |
| Ga0187875_104080572 | 3300018035 | Peatland | MNVIFVGRQSGRVKQFDLRQPLVIIAACAVVLMIVGGAFSIGMGLGARHGGISSIDQLG |
| Ga0187862_101612513 | 3300018040 | Peatland | MNIIFVGRKTGRVKQLDLQHPLVVAAAIGLVIAIVGGAFSIGISLGSNHR |
| Ga0187887_104615821 | 3300018043 | Peatland | MNVIFVGRKTGRVKQLDLRHPLVAALAIGLVIGIVGGAFSIGVGLGSSRHS |
| Ga0193743_11162141 | 3300019889 | Soil | MNVIFVGRKSGRVKQFDLQHPVIMSIAGLLVLAIVGTAFSIGVGLGARHGS |
| Ga0193728_12760121 | 3300019890 | Soil | MNVILVGRKSGRVKQFDLRHPVIVAAAALIVFGIVGG |
| Ga0193726_12440553 | 3300020021 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAALLILGVLGTAFSIGVGLGARHGSG |
| Ga0193752_13228052 | 3300020027 | Soil | MNVIFVGRKSGRVKQFDLQHPVIMSIAGLLVLAIVGTAFSIGVGLGARHGSGN |
| Ga0210403_101870843 | 3300020580 | Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIVGGAFSVGVG |
| Ga0210403_110848671 | 3300020580 | Soil | MNVIFVGRKSGRVKQFDLRHPVVVTAAVLMVFGIVG |
| Ga0210399_103055173 | 3300020581 | Soil | MNVIFVGRKSGRVKQFDLHHPAIVATAVLMVLGVVGG |
| Ga0210399_113903232 | 3300020581 | Soil | MNVIFVGRKSGRVKQFDLRHPLVVAAAVLTVLGIVGGE |
| Ga0210401_103240921 | 3300020583 | Soil | MNVIFVGRKSGRVKQLDLRHPLILAAAAGLVFLVVGGAFSVGVGLGAR |
| Ga0210406_103709081 | 3300021168 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAGALLVVGILATAFSIGVGLGARHGS |
| Ga0210406_110626052 | 3300021168 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAGALLVLAILG |
| Ga0210400_106281311 | 3300021170 | Soil | MNVIFVGRKSGRVKQIDLQHPVVMAAAVLLVIAIVGGA |
| Ga0210400_112750521 | 3300021170 | Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIVGG |
| Ga0210400_113627142 | 3300021170 | Soil | MNVIFVGRKTGRVKQVDLRHPLVISAAGAVVLLIVG |
| Ga0210396_109902962 | 3300021180 | Soil | MNVIFVGRKSGRVKQFDLHHPAIVATAVLMVLGVVGGAFSVGVGLGARHGTTN |
| Ga0210388_102888673 | 3300021181 | Soil | MNVIFVGRKSGRVKQFDLHHPAIVATAVLMVLGVVGGAFSVGVGLGARHGTT |
| Ga0210393_109669982 | 3300021401 | Soil | MNVIFVGRKTGRVKQLDLRHPFVVTAALTLVFGIVGGAFSVGVGLGVHHHAATP |
| Ga0210397_113303382 | 3300021403 | Soil | MNVIFVGRKSGRVKQFDLHHPIILVAGALLVLGIVGGAFSVGVGLGARHGSANV |
| Ga0210397_114434571 | 3300021403 | Soil | MNVIFVGRKTGRVKQFDLRHPVVIAAAVLTVLLIVGGAFSVGMGLGARHGA |
| Ga0210389_114518832 | 3300021404 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAALLVLAIVGTAFSI |
| Ga0210387_100170957 | 3300021405 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAALLVLAIVGTAFSIGMGLGARHGGGNPIDQLGS |
| Ga0210387_102509771 | 3300021405 | Soil | MNVIFVGRKSGRVKQFDLHHPIIVAAAVLLVLAIVGGAFSVGVGLGARHSTSNSIN |
| Ga0210387_116534051 | 3300021405 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAMLLVLAIVGTAFSVGLGLGARHGGDNPINQ |
| Ga0210386_104171603 | 3300021406 | Soil | MNVIFVGRKTGRVKQVDLRHPLVMSAAGAVVLLIVAGAFSIGMGL |
| Ga0210383_113179702 | 3300021407 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAVLLVLAIVGSAFSIGVGLGARHGSGNP |
| Ga0210394_109990341 | 3300021420 | Soil | MNVIFVGRKTGQVKQLDLRHPLVIAAAVAVVFGVVGGAFSIGLKLGVGHGGANPI |
| Ga0210398_101154211 | 3300021477 | Soil | MNVILVGRKSGRVKQFDLHHPAVLSVAALLVLGILGT |
| Ga0210410_101725291 | 3300021479 | Soil | MNVIFVGRKSGRVKQIDLQHPVVIAAAVLLVVGIMGGAFS |
| Ga0210410_111157322 | 3300021479 | Soil | MNVIFVGRKTGRVKQLDLRHPIVVTAALTLVFGIVGGAFSIG |
| Ga0247691_10495051 | 3300024222 | Soil | MNVIFVGRKSGSVKQFDLRHPMVIAAAVLVVLGIVGVAFSAGIGLGARHGKANSID |
| Ga0247676_10781022 | 3300024249 | Soil | MNVIFVGRKSGSVKQFDLRHPMVIAAAVLVVLGIVGVAFSAGIGLGARHG |
| Ga0247674_10263432 | 3300024275 | Soil | MNVIFVGRKSGSVKQFDLRHPMVIAAAVLVVLGIVGVAFSAGIGL |
| Ga0208219_10721421 | 3300025625 | Arctic Peat Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAVLLVLAIVGTAFSIGLSLGARH |
| Ga0207665_101166311 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MNVIFVGRKSGSVKQFDLRHPVVIAAAVLVVLGIVGVAFSAGIGLGARHGPGANCFSNCRRLNDS |
| Ga0209871_10787782 | 3300026217 | Permafrost Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAALLVLAIVGTAFSIGVGLGARHNGGNPID |
| Ga0209890_102780681 | 3300026291 | Soil | MNVIFVGRKTGRVKQLDLRHPLVLGAAVALVFVIVGGAFSIGMGLGSRHRSTNP |
| Ga0179587_108353242 | 3300026557 | Vadose Zone Soil | MNVIFVGHKSGLVKQFDLRHPVLVAAAILLVLSVVGGAFSVGVGLG |
| Ga0208982_10356471 | 3300027574 | Forest Soil | MNVILVGRKSGRVKQFDLRHPVIMSAGALLVLAVL |
| Ga0208988_11209942 | 3300027633 | Forest Soil | MNVIFVGRKSGRVKEFDLRHPMIVAAAVLMVIGIVGGAFSVG |
| Ga0209530_11082691 | 3300027692 | Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSSAVLLVLAIVGTAFSI |
| Ga0209038_102566691 | 3300027737 | Bog Forest Soil | MNVIFVGRKSGRVKQIDLQHPIVMAAAVLLVIAIVGGAFSVGVGLGARHGRSNPI |
| Ga0209139_103434821 | 3300027795 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLRHPLVVVAALALVLGIVG |
| Ga0209773_103217542 | 3300027829 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAVLLVLGILGTA |
| Ga0209773_103934321 | 3300027829 | Bog Forest Soil | MNVIFVGRKSGRVKQFDLRHPLVVVAALALVLGIVGGAFSVGMGLGARHGT |
| Ga0209517_100266266 | 3300027854 | Peatlands Soil | MNVIFVGRKTGRVKQLDLQHPLVVAAAIGLVIAIVGGAFSIGISLGSNHRSSNPIDQLGS |
| Ga0209693_103577341 | 3300027855 | Soil | MNVIFVGRKSGRVKQFDLHHPAIVATAVLLVLGVVGGAFSVGV |
| Ga0209611_105406982 | 3300027860 | Host-Associated | MNVIFVGRRSGRVRQFDLRHPIIISSAILCVLVIVGSAFSLGVG |
| Ga0209275_104334441 | 3300027884 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAALLVLAIVGTAFSIG |
| Ga0209624_110646052 | 3300027895 | Forest Soil | MNVIFVGRKSGRVKQFDLHHPLIVAAAVLLVLAIVGGAFSVG |
| Ga0209698_102358231 | 3300027911 | Watersheds | MNVIFVGRQPGRVKQFDLRHPLVVAAALAVVLLVVGTAFSLGMSLGKRHGTGNPLDQL |
| Ga0209698_113653831 | 3300027911 | Watersheds | MNVIFVGRLSGRIKQLDLQRPAVVFAALLLVLVVVGGAFSVGMRLD |
| Ga0209062_12963171 | 3300027965 | Surface Soil | MNLILVGRKTGRVRQLDLRHPLVVLTALALVVGVVGGAFSLGVSLGVHHRGATAID |
| Ga0209526_108934841 | 3300028047 | Forest Soil | MNVIFVGRKTGRVKQLDLRHPLVVTAALTLVFGIV |
| Ga0137415_105707112 | 3300028536 | Vadose Zone Soil | MNVIFVGRKSGRVKQFDLRHPVVVAAAVLLVLGIVGGAFSVGIGLGARHGTGNTINQLGD |
| Ga0137415_109305681 | 3300028536 | Vadose Zone Soil | MNVIFVGRKSGRVKQFDLRHPLVVAAAVLTVLGIVGGAFSVGVGLGA |
| Ga0137415_111730391 | 3300028536 | Vadose Zone Soil | MNVIFVGRKSGRVKQFDLRHPVIVAAALLTVLGILGAAFSVGVGLGA |
| Ga0302279_101366593 | 3300028783 | Bog | MNVIFVGRQAGRVKQFDLRQPLVIAAAFLVVFVIIGGAFSVG |
| Ga0302279_103546242 | 3300028783 | Bog | MNVIFVGRKTGRVKQLDLRHPLVVGAAVLLVIVIVGGAFSIGMGLGSRSRGSNALSQL |
| Ga0308309_112212501 | 3300028906 | Soil | MNVIFVGRKSGRVKQIDLQHPVVMAAAVLLVIAIVGGAFSVGI |
| Ga0311327_102757691 | 3300029883 | Bog | MNVIFVGRQAGRVKQFDLRQPLVIAAAFLVVFVIIGGAFSVGMGLGSRHGAIG |
| Ga0311361_104515463 | 3300029911 | Bog | MNVLFVGRQSGRIKQIDLRHPVWVITAIAIVLVIVGGAFSIGLGLGSRHGTPNPVDQLGD |
| Ga0311358_102003601 | 3300029915 | Bog | MNVIFVGRNSGRMRQFDLRHPAIVAAAVLVVLAVVGGAFSLGM |
| Ga0311330_112666441 | 3300029945 | Bog | MNVIFVGRKTGRVKQLDLRHPLVVVAAVGLVLLIVGGAFS |
| Ga0311343_109810491 | 3300029953 | Bog | MNVIFVGRKTGRVKQLDLRHPLVVMAAALLVLGIVGGAFSIGVSLGANHR |
| Ga0302276_104475672 | 3300029992 | Bog | MNVLFVGRQSGRIKQIDLRHPVWVITAIAIVLVIVGGAFSIGLGLGSRHGT |
| Ga0302302_10796271 | 3300029997 | Palsa | MNVIFVGRKTGRVKQLDLRHPLVIAAALVLVSGIVGGAFSIGMSLGARHGTTNPVDQLGG |
| Ga0302179_101259221 | 3300030058 | Palsa | MNVIFVGRKSGRVKQFDLRHPVIMSAAALLVLAIVGTAFSIGVSLGARHGSGN |
| Ga0302275_102098303 | 3300030518 | Bog | MNVIFVGRKSGRVKQFDLRHPLVVAAAVLFVLGIVG |
| Ga0302275_102231261 | 3300030518 | Bog | MNVIFVGRKSGRVKQFDLRHPLVVVGAVLLVLGIVGGAFS |
| Ga0311357_113358561 | 3300030524 | Palsa | MNVIFVGRKTGRVKQIDLRHPLVLCAATALVLLVVGGAFSIGMGLGTHGRNGTPIDQ |
| Ga0311356_101576424 | 3300030617 | Palsa | MNVIFVGRKSGRVKQLDLRHPLVLAAAAALAFVLVGGAFAIGVGLGARHRGASTVDQLG |
| Ga0316363_104000922 | 3300030659 | Peatlands Soil | MNVIFVGRKTGRVKQLDLRHPMVLAAAFALVLSIVGGAFSIGMSLGSRHRSTNPVDQLGG |
| Ga0170834_1110921162 | 3300031057 | Forest Soil | MNVIFVGRKSGSVKQFDLRHPVVIAAAVLVVLGIVGVAFSA |
| Ga0170824_1219706661 | 3300031231 | Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAVLIVLAIVGTAFSVGV |
| Ga0302323_1025391162 | 3300031232 | Fen | MNVIFVGRKSGRVKQFDLRHPVVVGAAVLCVLGIVGGAFSIGIGLGASHS |
| Ga0302324_1011800093 | 3300031236 | Palsa | MNVIFVGRKSGRVKQFDLRHPIIIAAAILCVLGIVGSAFSVGVGLGSRHKG |
| Ga0302140_100964466 | 3300031261 | Bog | MNVIFVGRQAGRVKQFDLRQPLVIAAAFLVVFVIIGGAFSV |
| Ga0302140_106283093 | 3300031261 | Bog | MNVIFVGRKTGRVKQLDLRHPLVIGAAAALVFALVGGAFSIGMGLGS |
| Ga0302326_119796943 | 3300031525 | Palsa | MNVIFVGRKSGRVSQLDLRHPLLLAAAAALVFLVI |
| Ga0310686_1023813851 | 3300031708 | Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAGLFVLAIVGTAFSIGV |
| Ga0310686_1129191094 | 3300031708 | Soil | MNVIFVGRKSGRVKQLDLRHPLVVGAAVALVLVIVGGAFS |
| Ga0307476_104907151 | 3300031715 | Hardwood Forest Soil | MNVIFVGRKSGRVKQFDLRHPVIMSAAALMVLGILGAAFSIGVGLGARHGHGNPLDQLGS |
| Ga0302319_116238752 | 3300031788 | Bog | MNVLFVGRQSGRIKQIDLRHPVWVITAIAIVLVIVGGAFSIGLGLGSRHGTPNPVDQ |
| Ga0302319_116879721 | 3300031788 | Bog | MNVIFVGRQSGRVKQFDLRRPLTVAAALAVVLVIVGSAFSV |
| Ga0307518_106189921 | 3300031838 | Ectomycorrhiza | MNVIFVGRKTGRVKQLDLRHPFVVTAALILVFGIVGGAFSIGVGLGVRHHAGNRI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |