Metagenome / Metatranscriptome Family F069079

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069079
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	106 residues
Representative Sequence	VKKSGWLLLPVLLALFVTTAIPQTRNHFPTPPEPLDPQSNDKAPATVSRHVDLAQLQKEADDLARTAQTIPSDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.23 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	67.74 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.161 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.78% β-sheet: 0.00% Coil/Unstructured: 55.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF17209	Hfq	17.74
PF00459	Inositol_P	12.90
PF00903	Glyoxalase	3.23
PF00694	Aconitase_C	3.23
PF14559	TPR_19	2.42
PF07676	PD40	2.42
PF12681	Glyoxalase_2	1.61
PF12838	Fer4_7	1.61
PF00589	Phage_integrase	0.81
PF00092	VWA	0.81
PF13519	VWA_2	0.81
PF00005	ABC_tran	0.81
PF02541	Ppx-GppA	0.81
PF02597	ThiS	0.81
PF05362	Lon_C	0.81
PF02780	Transketolase_C	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.61
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.81
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.81
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.81
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	91.94 %
Unclassified	root	N/A	2.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.55 %
Unclassified	root	N/A	2.42 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.55 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.32 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.87 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.26 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.26 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.16 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.26 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.26 %
Unclassified	root	N/A	2.42 %
Myxococcus hansupus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus hansupus	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1002244	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300001593\|JGI12635J15846_10276572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300002245\|JGIcombinedJ26739_100011128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7332	Open in IMG/M
3300002245\|JGIcombinedJ26739_101024542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300002245\|JGIcombinedJ26739_101327238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300003219\|JGI26341J46601_10005477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4165	Open in IMG/M
3300004080\|Ga0062385_11213591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300004091\|Ga0062387_100014246	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300004092\|Ga0062389_100640899	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300004152\|Ga0062386_100011246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6372	Open in IMG/M
3300004631\|Ga0058899_11601049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300004633\|Ga0066395_10982093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus hansupus	514	Open in IMG/M
3300005434\|Ga0070709_10162901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300005436\|Ga0070713_100017905	All Organisms → cellular organisms → Bacteria → Acidobacteria	5374	Open in IMG/M
3300005529\|Ga0070741_10123310	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300005541\|Ga0070733_10046125	All Organisms → cellular organisms → Bacteria → Acidobacteria	2725	Open in IMG/M
3300005568\|Ga0066703_10338837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	905	Open in IMG/M
3300005569\|Ga0066705_10076906	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300005587\|Ga0066654_10095290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1426	Open in IMG/M
3300005591\|Ga0070761_10016297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4125	Open in IMG/M
3300005591\|Ga0070761_10188841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1218	Open in IMG/M
3300005602\|Ga0070762_10406109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	878	Open in IMG/M
3300006052\|Ga0075029_101070427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300006176\|Ga0070765_101247894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300006237\|Ga0097621_101690991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300006893\|Ga0073928_10853383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300009137\|Ga0066709_101844970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	845	Open in IMG/M
3300010046\|Ga0126384_10546119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300010359\|Ga0126376_11005800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300010376\|Ga0126381_100249527	All Organisms → cellular organisms → Bacteria → Acidobacteria	2404	Open in IMG/M
3300010376\|Ga0126381_100271027	All Organisms → cellular organisms → Bacteria → Acidobacteria	2311	Open in IMG/M
3300010379\|Ga0136449_101429234	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300010398\|Ga0126383_10647966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300011120\|Ga0150983_10966136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300011120\|Ga0150983_11553962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300012207\|Ga0137381_10192847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1765	Open in IMG/M
3300014167\|Ga0181528_10367864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300014199\|Ga0181535_10326859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300014201\|Ga0181537_10003556	All Organisms → cellular organisms → Bacteria → Acidobacteria	13309	Open in IMG/M
3300014489\|Ga0182018_10000066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	123210	Open in IMG/M
3300014501\|Ga0182024_10001781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	54652	Open in IMG/M
3300014501\|Ga0182024_10005865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27251	Open in IMG/M
3300014501\|Ga0182024_10015378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14669	Open in IMG/M
3300014501\|Ga0182024_10979753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1011	Open in IMG/M
3300014501\|Ga0182024_12128868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300015193\|Ga0167668_1038206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300015193\|Ga0167668_1084036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300015371\|Ga0132258_11119035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1991	Open in IMG/M
3300017936\|Ga0187821_10154522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	868	Open in IMG/M
3300017943\|Ga0187819_10388410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300018007\|Ga0187805_10110560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300018034\|Ga0187863_10018835	All Organisms → cellular organisms → Bacteria → Acidobacteria	4246	Open in IMG/M
3300018035\|Ga0187875_10717335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300018043\|Ga0187887_10160411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1344	Open in IMG/M
3300018044\|Ga0187890_10081989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1886	Open in IMG/M
3300019786\|Ga0182025_1197795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1684	Open in IMG/M
3300020062\|Ga0193724_1078235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300020579\|Ga0210407_10165976	All Organisms → cellular organisms → Bacteria → Acidobacteria	1707	Open in IMG/M
3300020580\|Ga0210403_10015620	All Organisms → cellular organisms → Bacteria → Acidobacteria	6092	Open in IMG/M
3300020581\|Ga0210399_10035521	All Organisms → cellular organisms → Bacteria → Acidobacteria	3991	Open in IMG/M
3300020581\|Ga0210399_10790411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	775	Open in IMG/M
3300020582\|Ga0210395_10475143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300021168\|Ga0210406_10574970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	882	Open in IMG/M
3300021171\|Ga0210405_10107448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2203	Open in IMG/M
3300021180\|Ga0210396_10149846	All Organisms → cellular organisms → Bacteria → Acidobacteria	2095	Open in IMG/M
3300021181\|Ga0210388_10569601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	992	Open in IMG/M
3300021401\|Ga0210393_11305935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021401\|Ga0210393_11645792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300021402\|Ga0210385_10495829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	926	Open in IMG/M
3300021404\|Ga0210389_10698259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300021405\|Ga0210387_10903864	Not Available	777	Open in IMG/M
3300021406\|Ga0210386_10114926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2221	Open in IMG/M
3300021420\|Ga0210394_10149274	All Organisms → cellular organisms → Bacteria → Acidobacteria	2030	Open in IMG/M
3300021420\|Ga0210394_10195915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300021420\|Ga0210394_10686108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	898	Open in IMG/M
3300021433\|Ga0210391_10487691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300021477\|Ga0210398_10374251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1162	Open in IMG/M
3300021477\|Ga0210398_10803967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300021477\|Ga0210398_11197521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300021478\|Ga0210402_10019485	All Organisms → cellular organisms → Bacteria → Acidobacteria	5820	Open in IMG/M
3300021479\|Ga0210410_11323030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300022557\|Ga0212123_10280080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300022881\|Ga0224545_1018816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1005	Open in IMG/M
3300024176\|Ga0224565_1007800	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300025320\|Ga0209171_10190762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300025928\|Ga0207700_10212807	All Organisms → cellular organisms → Bacteria → Acidobacteria	1635	Open in IMG/M
3300026291\|Ga0209890_10199694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300026527\|Ga0209059_1141919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	885	Open in IMG/M
3300027505\|Ga0209218_1054862	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300027567\|Ga0209115_1090264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	697	Open in IMG/M
3300027629\|Ga0209422_1036512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300027652\|Ga0209007_1002713	All Organisms → cellular organisms → Bacteria → Acidobacteria	5012	Open in IMG/M
3300027652\|Ga0209007_1006366	All Organisms → cellular organisms → Bacteria → Acidobacteria	3188	Open in IMG/M
3300027684\|Ga0209626_1011484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2033	Open in IMG/M
3300027783\|Ga0209448_10009433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3105	Open in IMG/M
3300027812\|Ga0209656_10000021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	117447	Open in IMG/M
3300027853\|Ga0209274_10000370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29245	Open in IMG/M
3300027853\|Ga0209274_10119159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1314	Open in IMG/M
3300027867\|Ga0209167_10190330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300027884\|Ga0209275_10695727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300027895\|Ga0209624_10044100	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300027908\|Ga0209006_10049401	All Organisms → cellular organisms → Bacteria → Acidobacteria	3781	Open in IMG/M
3300028016\|Ga0265354_1030718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300028800\|Ga0265338_10011540	All Organisms → cellular organisms → Bacteria → Acidobacteria	10188	Open in IMG/M
3300028800\|Ga0265338_10875777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300028906\|Ga0308309_10912157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300029882\|Ga0311368_10725368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	684	Open in IMG/M
3300029993\|Ga0302304_10210696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300030043\|Ga0302306_10103596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300030813\|Ga0265750_1022691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300030991\|Ga0073994_12417314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300031090\|Ga0265760_10251533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031231\|Ga0170824_124894802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300031234\|Ga0302325_10052636	All Organisms → cellular organisms → Bacteria → Acidobacteria	8078	Open in IMG/M
3300031344\|Ga0265316_10073372	All Organisms → cellular organisms → Bacteria → Acidobacteria	2636	Open in IMG/M
3300031344\|Ga0265316_11008633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031708\|Ga0310686_100084269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8578	Open in IMG/M
3300031708\|Ga0310686_104234374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8854	Open in IMG/M
3300032515\|Ga0348332_14055566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300032954\|Ga0335083_10011010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10888	Open in IMG/M
3300033888\|Ga0334792_028201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1914	Open in IMG/M
3300033888\|Ga0334792_109135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.35%
Host-Associated	Host-Associated	5.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.81%
Aquatic	Environmental → Aquatic	18.55%
Plants	Host-Associated → Plants	5.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.55%
Freshwater	Environmental → Aquatic → Freshwater	13.71%
Peat	Environmental → Terrestrial → Peat	5.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.03%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.61%
Sediment	Environmental → Aquatic → Sediment	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.71%
Loam	Environmental → Terrestrial → Soil → Loam	22.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.03%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.29%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.84%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.42%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10022444	3300001166	Forest Soil	VKKSAWLSLCLLLGLLATTATPQTAGHHFPTPPEPLDSSTTAKEPATSSRHTDLAQLQKEADELARTAQTIPSDVASIRQGILPKDAIEKLKQIEKLSRRLRTELNP*
JGI12635J15846_102765722	3300001593	Forest Soil	VKKSMLLALPLTLALVAAPAIPQGTKNNYPTPPPPLNSTTGEKEPATFGRRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP*
JGIcombinedJ26739_1000111282	3300002245	Forest Soil	VKRFQSMAVPVLLLLSTPWATPQNTHHFPSPPGSMDDQTKQSQSPSLPTKHIDLAQAQREADELARTAQTIPSDVASVRKGILPKDVIEKLKQIEKLSKRLRSELTP*
JGIcombinedJ26739_1010245422	3300002245	Forest Soil	MNKSAWLSLPLMLALFVVQVFAQTRNNFPRPPEALDPNVTERAPATSSKHIDLAKLQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRGELNP*
JGIcombinedJ26739_1013272382	3300002245	Forest Soil	NARCGELSHHGRTIPENLRLSSLGWRPNVHKSFLLWFTLVFGLFVSLAAPQTRNNYPKPPETLDSSTTEKVPTASTRHVDLGQLQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRNELDH*
JGI26341J46601_100054775	3300003219	Bog Forest Soil	MKKSAWLALPAVLGLSVALAAPQSTHHYPTPPESMDPASTDKEPGTLPRRADLAQLQRDADELSRTAQTIPGDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0062385_112135911	3300004080	Bog Forest Soil	KKSTWLSLPVMLGLFVTLAIPQTTGHHYPTPPEPLDPTASEKDSAGLSRRVNLVQLQKEAEDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP*
Ga0062387_1000142464	3300004091	Bog Forest Soil	VKKSTWLSLPVMLGLFVTLAIPQTTGHHYPTPPEPLDPTASEKDSAGLSRRVNLVQLQKEAEDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP*
Ga0062389_1006408992	3300004092	Bog Forest Soil	VKKSAWLVLPATLGLLVALATPQTHNTFPTPPPSLDPVATEKEEATAARHVDLAQLQKQADDLARTAQTIPSDVASIRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0062386_1000112464	3300004152	Bog Forest Soil	VKKSAWLALPAVLVLLVAPAAPQSHNTFPQPPPSLDTTPTEKNEAASTRRIDLAQLQREADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRLELTP*
Ga0058899_116010492	3300004631	Forest Soil	LSLCLLLGLLARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP*
Ga0066395_109820931	3300004633	Tropical Forest Soil	MRSAMFKFSAGLGALILGLLAAPAAAQTGSHHLPTPPEALDKQSQTKEPPPTPAHQVDPAQLQKDADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0070709_101629012	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKKTGLLLPIVLGLFVSTAIPQTRNHFPTPPESMDSKAPDKATPTTAARRVDLEQLQKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKHLRGELAP*
Ga0070713_1000179055	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKRSCWLVPSTLGLLLAVAASQSSHHFPTPPEPLDPTSQQKRPETPSRRVDLAQLEKEADDLARTAQTIPADVANVRKGMLPKDVIEKLKQIEKLSKRMRTELNP*
Ga0070741_101233103	3300005529	Surface Soil	VKNIRMLAILSALAVFAPSAITQTGSHHFPSPPEPLDQQSAKEGAPTLKRHVDFNQIQQEADELARTAQTIPPDVASIRKGMLPKDTIEKLKQIEKLSKRLRTELSL*
Ga0070733_100461252	3300005541	Surface Soil	VNSLPFLKVLAVLVIFVSIAVPQAPTHHFPTPPEPLDSQAQSQTASQPSAKWRLNLAQAQKEADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP*
Ga0066703_103388372	3300005568	Soil	VKKSNFLIVPAVLSVFVTLAASQSRTHFPTPPEPMNQEQTAKAPTTSTRRIDLEQVQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRGELNP*
Ga0066705_100769061	3300005569	Soil	AAPQTTGHHFPTPPESLDPKAQKQADDSAVPKERLNLAQAQKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIERLSKHLRTELNP*
Ga0066654_100952902	3300005587	Soil	VKKSNFLIVPAVLSVFVTLAASQSRTHFPTPPEPMNQEQTAKAPTTSTRRIDLEQVQREADDLARTAQTIPSDVASVRQGMLPKDVIEKLKQIEKLSKHLRGELNP*
Ga0070761_100162974	3300005591	Soil	VKKSAWLALPAVLGFLVAPADPQSHNTFPTPPPSLDSTASEKPEAAPTHRVDLAQLQREADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP*
Ga0070761_101888413	3300005591	Soil	VKKSAWLSLPAMLGLFVSLAVPQSTHHFPTPPESLDAQPPKVDSPTAPLRVDIEQLQREADTLARTAQTIPSDVASIRKGMLPKDAIEKLKQIEKLSKHLRTELTP*
Ga0070762_104061092	3300005602	Soil	VKKSTLPSLLVMLGLWATLATPQTTHHYPTPPEALDPQAPQKESPALSRRLDLAQLQQEADDLARTAQTIPADFTSVRKGMMPKDVIQKLKQIEKMSKHLRGALAP*
Ga0075029_1010704271	3300006052	Watersheds	VKKFFLLSIPVALGLFVTPAIPQARNNYPKPPGSLDSTTTEKGPAPSSRHIDMAQVQSEADDLARTAQTIPSDVASVRKGMLPKDMIEKLKQIEKLSKRIRTELTP*
Ga0070765_1012478942	3300006176	Soil	VKKSLLLALPLISALLAAPAIPQGTKNNYPTPPPPLNSTTGEKEPATFGRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP*
Ga0097621_1016909911	3300006237	Miscanthus Rhizosphere	VKQFTLLLLLLVIGMLITPATPQTRNHFPTPPEPMDSKATEKGPTTTTSRRVDLEQLQKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRGELAP*
Ga0073928_108533831	3300006893	Iron-Sulfur Acid Spring	VKKSAWLSLCLLLGLLATTATPQTGHHFPTPPEPLDSSTAAREPATSSRRVDMAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP*
Ga0102924_13496691	3300007982	Iron-Sulfur Acid Spring	FTSCGRRVAVKRPAFILSAILGLWAAMAAAQSGHFPSPPQPLDNSTQEKTPPMTSRRVDLTQLEREANVLARTAQTIPSDIANVRKGMMPKDVIEKLKQIEKLSKHLRGELNP*
Ga0066709_1018449701	3300009137	Grasslands Soil	MVFGLFVTLAIPQTRNHFPTPPEPLDSKATNKAPGTAPSRRVDLEQLQKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRGELTP*
Ga0126384_105461192	3300010046	Tropical Forest Soil	MRSAMFKFSAGLGALILGLMAAPAAAQTGSHHLPTPPEALDKQSQTKEPPPTPAHQVDPAQLQKDADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0126376_110058002	3300010359	Tropical Forest Soil	MFKLSVGLCALILGLIAAHPAAQTGSHHFPTPPEALDKQSQAKQSSPTPTRQVDPAQLQKDADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLS
Ga0126381_1002495273	3300010376	Tropical Forest Soil	MRSAMFKFSAGLGALILGLMAAPAAAQTGSHHLPTPPEALDKQSQTKKPPPTPAHQVDPAQLQKDADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0126381_1002710272	3300010376	Tropical Forest Soil	MRSFTLNFPAILGLLVLLAAPQTSNHFPTPPEPLDTQAPKSEQPQTLPRQIDFVQVQKQADDLARLAQTIPPDVASMRKGMRPKDVVEKLKQIEKLSKRLRTELNP*
Ga0136449_1014292343	3300010379	Peatlands Soil	MPETSSGRRRTVKQRAWISLPVTLGLFVTLALPQARNNYPKPPEPLDSSNTNQAPTANSKRLDLVQLQRDADDLVRTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP*
Ga0126383_106479661	3300010398	Tropical Forest Soil	MRSAMFKFSAGLGALILGLMAAPAAAQTGSHHLPTPPQALDKQSQTKEPPAAPAHQVDPAQLQKDADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0150983_109661361	3300011120	Forest Soil	SLCLLLGLLARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP*
Ga0150983_115539622	3300011120	Forest Soil	MKKLVLLLLPLLFGPLVTPALPQTSNNFPKPPESMGPQTTSQAPARPSRHIDLEQLRREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0137381_101928472	3300012207	Vadose Zone Soil	VKKSGWLLLPVLLALFVTTAIPQTRNHFPTPPEPLDPQSNDKAPATVSRHVDLAQLQKEADDLARTAQTIPSDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0181528_103678641	3300014167	Bog	RRHTVKKSAALSLPFMLGLFVLGLFVALATPQSTHHYPTPPETMDTTPADKEQQPAISPRVNLEQLQREADDLARTAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRMRTELNP*
Ga0181535_103268592	3300014199	Bog	MLGLFVLGLFVALATPQSTHHYPTPPETMDTTPADKEQQPAISPRVNLEQLQREADDLARTAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRMRTELNP*
Ga0181537_100035562	3300014201	Bog	VKKSVWLSLPAVLGLFVALAVPQTTHHFPTPPESMDPAPPEKESTTFSRHVDIEQLQREADALARTAQTIPSDVASIRKGMLPKDAIEKLKQIEKLSKHLRAELNP*
Ga0182018_100000668	3300014489	Palsa	VKKSVWLSLSLLLGLLATTATPQTTGHHFPTPPEPLDSSTTAKEPATSSRHIDLAQLQKEADELARTAQTIPSDVASIRKGILPKDAIEKLKQIEKLSRRLRTELRSAFSSLKLLAPAFRSWRNAKS*
Ga0182024_100017814	3300014501	Permafrost	LLALSVTLAIPQTTGHHFPTPPEALDPKPIDKSADTPSRRLDLIQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP*
Ga0182024_1000586524	3300014501	Permafrost	MPEKLHSPGRRRPVKKSVLLSLPLLLGLLVTPAIPQGTGHHFPTPPEPLDTATSEKAPATSSRRVDLAQLQREAEDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0182024_100153787	3300014501	Permafrost	VKKSFLRLLPIVLGASVTLGVSQSRSNFPKPPESLDSTSSEKAPSTPSRRVDLVQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSRRLRSELTP*
Ga0182024_109797533	3300014501	Permafrost	VKKSVWLSLSLLLGLLATTATPQTTGHHFPTPPEPLDSSTTAKEPATSSRHIDLAQLQKEADELARTAQTIPSDVASIRKGILPKDAIEKLKQIEKLSRRLRTE
Ga0182024_121288681	3300014501	Permafrost	VKKSAWLSLSLLLGLLATTATPQTTGHHFPTPPEPLDSSTTAKEPANSSRHIDLAQLQKEADELARTAQTIPSDVASIRKGILPKDAIEKLKQ
Ga0167668_10382062	3300015193	Glacier Forefield Soil	MSLPLLLGMLATTAIPQTHHFPTPPEPLDPQSPTKQPSVFSRRVDLEQMQREADDLARTAQTIPTDVANVRKGMLPKDVIEKLKQIEKLSKRLRTEMNP*
Ga0167668_10840362	3300015193	Glacier Forefield Soil	MSFPLLLGMLVTTAIPQTNHFPTPPEPLDPQSPTKQPSVFSRHVDLEQMQREADDLARTAQTIPTDVANIRKGMLPKDVIEKLKQIEKLSK
Ga0132258_111190352	3300015371	Arabidopsis Rhizosphere	VKKTGLLLPIVFGLFISTAIPQTRNHFPTPPESMDSKAPDKATPTTAARRVDLEKLQKEADDLARTAQTIPADVASVRQGMLPKDVIEKLKQIEKLSKHLRGELAP*
Ga0187821_101545223	3300017936	Freshwater Sediment	VKKTGWLLPIVLGLFVSTAIPQTRNHFPTPPESMDSKAPDKANPTTAARRVDLEQLQKEADDLARTAQTIPADVASVRKGMLPKDVIEK
Ga0187819_103884101	3300017943	Freshwater Sediment	VKRSVVFLPAVLGLFVALASPQTAHHFPTPPDSMDSDNKNQPRDAATQTRRVDLALIQKEAEDLARTAQTIPSDVASVRQGMLPKDVIDKLKQIEKLSKHLRNELNP
Ga0187805_101105602	3300018007	Freshwater Sediment	VKRSVVFLPAVLGLFVALASPQTAHHFPTPPDSMDSDNKNQPRDAATQTRRVDLALIQKDAEDLARTAQTIPSDVASVRQGMLPKDVIDKLKQIEKLSKHLRNELNP
Ga0187863_100188354	3300018034	Peatland	VKIFRFPTVIAFLVVSTAWAAPQNTHHFPTPPGSMDDQSQQPNSPSLPSKHIDLVQAQREADDLARTAQTIPLDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELNP
Ga0187875_107173351	3300018035	Peatland	PQSTHHYPTPPETMDTTPADKEQQPAISPRVNLEQLQREADDLARTAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRMRTELNP
Ga0187887_101604111	3300018043	Peatland	VSTAWAAPQNTHHFPTPPGSMDDQSQQPNSPSLPSKHIDLVQAQREANDLARTAQTIPLDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELNP
Ga0187890_100819892	3300018044	Peatland	VKKSAALSLPFMLGLFVLGLFVALATPQSTHHYPTPPETMDTTPADKEQQPAISPRVNLEQLQREADDLARTAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRMRTELNP
Ga0182025_11977953	3300019786	Permafrost	LGLLVTPAIPQGTGHHFPTPPEPLDTATSEKAPATSSRRVDLAQLQREAEDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0193724_10782352	3300020062	Soil	VKKSALLLLPMVFGLFVTLAIPQTRNHFPTPPEPLDSKATSKAPGTTPSRRVDLEQLQKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRGELTP
Ga0210407_101659762	3300020579	Soil	MKKLVLLLLPLLFGPLVTPALPQTSNNFPKPPESMDPQTTRQGPATPSRHIDLEQLQREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0210403_100156203	3300020580	Soil	VKKSAWLSLCLLLGLQARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0210399_100355213	3300020581	Soil	VKKSAWLSLSLLLGLLATTATPQSTGHHFPTPPEPLDSSTTAKEPATSSRHVDLAQLQKEADQLASTAQTIPSDVASIRKGILPKDVIEKLKQIEKLSRRLRTELNP
Ga0210399_107904111	3300020581	Soil	MKKLVLLLLPLLFGPLVTPALPQTSNNFPKPPESMDPQTTRQAPATPSRHIDLEQLQREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0210395_104751432	3300020582	Soil	VKKSAWLSLCLLLGLLATTATPQTAGHHFPTPPEPLDSSTTAKEPATSSRHTDLAQLQKEADELARTAQTIPSDVASIRKGILPKDMIEKLKQVEKLSRRLRTELNP
Ga0210406_105749701	3300021168	Soil	MKKLVLLLLPLLFGPLVTPALPQTRNNFPKPPESMGPQTTSQAPARPSRHIDLEQLRREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKRLRAELNP
Ga0210405_101074482	3300021171	Soil	VKKSAGLSLCLLLGLLARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0210396_101498462	3300021180	Soil	VKKRAWISLPVTLGLFVTLALPQARNNYPKPPEPQDSSNTNQAPTANSKRLDLVQLQRDADDLARTAQTIPTDVANVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0210388_105696011	3300021181	Soil	VKKSVWAPLILMMLVLVAAPAIPQSRNSFPTPPPSMDPENPQGQQKDSTTVTRHVDLAQLQREAEDLARTAQSIPSDVANVRKGTLPKDVIEKLKQIEKLSKHLRTEL
Ga0210393_113059351	3300021401	Soil	VKKSAWLSLCLLLGLQARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELERTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0210393_116457921	3300021401	Soil	VKKSVWAPLILMMLVLVAAPAIPQSRNSFPTPPPSMDPENPQGQQKDSTTATRHVDLAQLQREAEDLARTAQSIPSDVANVRKGTLPKDVIEKLKQIEKLSKHLRTELNP
Ga0210385_104958292	3300021402	Soil	VKKRAWISLPVTLGLFVTLALPQARNNYPKPPEPQDSSNTSQAPSANSKRLDLVQLQRDADDLARTAQTIPTDVANVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0210389_106982592	3300021404	Soil	VKKRAWISLPLTLGLFVTLALPQARNNYPKPPAPQDSSNTSPAPTTNSKRLDLVQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0210387_109038641	3300021405	Soil	VKKSTLPSLLVMLGLWATLATPQTTHHYPTPPEALDPQAPQKESPALSRRLDLAQLQQEADDLARTAQTIPADFTSVRKGMMPKDVIQKLKQIEKMSKHLRGALAP
Ga0210386_101149262	3300021406	Soil	VAKERPTNRRTMPENFLVSRPRRIVKKSMLLALPLILALLAAPAIPQGTRNNYPTPPPPLNSTTGEKEPATFGRRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0210394_101492742	3300021420	Soil	MKKLVLLLLPLLFGPLVTPALPQTSNNFPKPPESMDPQTTRQGPATPSRHIDLEQLQREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKRLRTELNS
Ga0210394_101959152	3300021420	Soil	VKKSACLSLSLLLGLLATTATPQSAGHHFPTPPEPLDSSTTAKEPATSSRHVDLAQLQKEADQLASTAQTIPSDVASIRKGILPKDLIEKLKQIEKLSRRLRTELNP
Ga0210394_106861082	3300021420	Soil	VKKRAWISLPVTLGLFVTLALPQARNNYPKPPEPQDSSNTSQAPSANSKRLDLVQLQRDADDLARTAQTIPTDVANVRKGMLPKDVIDKLKQIERLSKRLRTELNP
Ga0210391_104876912	3300021433	Soil	VKKSAWLSLCLLLGLQARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDMIEKLKQVEKLSRRLRTELNP
Ga0210398_103742511	3300021477	Soil	VKKRAWISLPVTLGLFVTLALPQARNNYPKPPEPQDSSNTSQAPSANSKRLDLVQLQRDADDLARTAQTIPTDVANVRKGMLPKDVIDKLKQIERLSKR
Ga0210398_108039672	3300021477	Soil	SLSLLLGLLATTATPQGTGHHFPTPPEPLDSSTTAKEPATSSRHVDLAQLQKEADQLASTAQTIPSDVASIRKGILPKDVIEKLKQIEKLSRRLRTELNP
Ga0210398_111975212	3300021477	Soil	VKRFQSMAVPVLLLLSTPWATPQNTHHFPSPPGSMDDQTQQSQSPSLPTKHIDLAQAQREADELARTAQTIPSDVASVRKGILPKDVIEKLKQIEKLSKRLRSELTP
Ga0210402_100194856	3300021478	Soil	MKKLVLLLLPLLFGPLVTPALPQTSNNFPKPPESMDPQTTRQAPATPSRHIDLEQLQREADDLARKAQSIPSDVASVRQGMLPKDVIEKLKQIEKLSKR
Ga0210410_113230302	3300021479	Soil	VKKSAWLSLCLLLGLLARTATPQTGHHFPTPPEPLDSSTTAREPATASRRVDLAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0212123_102800802	3300022557	Iron-Sulfur Acid Spring	VKKSAWLSLCLLLGLLATTATPQTGHHFPTPPEPLDSSTAAREPATSSRRVDMAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0212123_105277711	3300022557	Iron-Sulfur Acid Spring	VKRPAFILSAILGLWAAMAAAQSGHFPSPPQPLDNSTQEKTPPMTSRRVDLTQLEREANVLARTAQTIPSDIANVRKGMMPKDVIEKLKQIEKLSKHLRGELNP
Ga0224545_10188161	3300022881	Soil	VKKSFLRLLPIVLGASVTLGVSQSRSNFPKPPESLDSTSSEKAPSTPSRRVDLVQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELTP
Ga0224565_10078002	3300024176	Plant Litter	VKKSAWLALPAVLVLLVALAAPQSHNTFPTPPQSLDTTASQKPEATPARRIDLDQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0209171_101907622	3300025320	Iron-Sulfur Acid Spring	CIVKKSAWLSLSLLLGLLATTATPQSTGHHFPTPPEPLDSSTAAREPATSSRRVDMAQLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0207700_102128072	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VKRSCWLVPSTLGLLLAVAASQSSHHFPTPPEPLDPTSQQKRPETPSRRVDLAQLEKEADDLARTAQTIPADVANVRKGMLPKDVIEKLKQIEKLSKRMRTELNP
Ga0209890_101996941	3300026291	Soil	LSGRRRTVKKSVLLSLPVTLGLFVTLAVPQATSNYPKPPAHLDSADTVQAPTPPSRRLDLVQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0209059_11419192	3300026527	Soil	VKKSNFLIVPAVRSVFVTLAASQSRTHFPTPPEPMNQEQTAKAPTTSTRRIDLEQVQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEK
Ga0209218_10548621	3300027505	Forest Soil	VKKSAWLSLCLLLGLLATTATPQTAGHHFPTPPEPLDSSTTAKEPATSSRHTDLAQLQKEADELARTAQTIPSDVASIRQGILPKDAIEKLKQIEKLSRRLRTELNP
Ga0209115_10902642	3300027567	Forest Soil	KKSAWLSLCLLLGLLATTATPQTAGHHFPTPPEPLDSSTTAKEPATSSRHTDLAQLQKEADELARTAQTIPSDVASIRQGILPKDAIEKLKQIEKLSRRLRTELNP
Ga0209422_10365122	3300027629	Forest Soil	VKKSMLLALPLTLALVAAPAIPQGTKNNYPTPPPPLNSTTGEKEPATFGRRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0209007_10027132	3300027652	Forest Soil	VKRFQSMAVPVLLLLSTPWATPQNTHHFPSPPGSMDDQTKQSQSPSLPTKHIDLAQAQREADELARTAQTIPSDVASVRKGILPKDVIEKLKQIEKLSKRLRSELTP
Ga0209007_10063665	3300027652	Forest Soil	VKKSAWLSLCLLLGLLATMATPQTAGHHFPTPPEALDSSTTAKEPATSSRHTDLAQLQKEADELARTAQTIPSDVASIRQGILPKDAIEKLKQIEKLSRRLRTE
Ga0209626_10114842	3300027684	Forest Soil	VKKSMLLALPLMLALLAAPAIPQGTKNNYPTPPPPLNSTTGEKEPATLRRRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0209448_100094334	3300027783	Bog Forest Soil	VKKSTWLSLPVMLGLFVTLAIPQTTGHHYPTPPEPLDPTASEKDSAGLSRRVNLVQLQKEAEDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP
Ga0209656_1000002117	3300027812	Bog Forest Soil	MKKSAWLALPAVLGLSVALAAPQSTHHYPTPPESMDPASTDKEPGTLPRRADLAQLQRDADELSRTAQTIPGDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0209274_1000037012	3300027853	Soil	VKKSAWLALPAVLGFLVAPADPQSHNTFPTPPPSLDSTASEKPEAAPTHRVDLAQLQREADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0209274_101191593	3300027853	Soil	VKKSAWLSLPAMLGLFVSLAVPQSTHHFPTPPESLDAQPPKVDSPTAPLRVDIEQLQREADTLARTAQTIPSDVASIRKGMLPKDAIEKLKQIEKLSKHLRTELTP
Ga0209167_101903303	3300027867	Surface Soil	MNSLLFLKVLAVLVLLVSIAVPQAPTHHFPTPPEPLDSQAQSQTASQPSAKWRLNLAQAQKEADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP
Ga0209275_106957271	3300027884	Soil	VKRFQSMAVPVLLLLSTPWATPQNTHHFPSPPGSMDDQTKQSQSPSLPTKHIDLAQAQREADELARTAQTIPSDVASVRKGILPKDVIKKLKQIEKLSKRLRSELTP
Ga0209624_100441002	3300027895	Forest Soil	VKKSAWLSLPLALGLFVASASPQSAGHGGFPTPPQPMDSSTLEKTPSTPTRRIDLAQLQQEADDLARTAQTIPSDVANVRKGILPKDVIAKLKQIEKLSKRLRTELNP
Ga0209006_100494013	3300027908	Forest Soil	VHKSFLLWFTLVFGLFVSLAAPQTRNNYPKPPETLDSSTTEKVPTASTRHVDLGQLQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRNELDH
Ga0265354_10307181	3300028016	Rhizosphere	VKKSAWLALPAVLVFLVALAAPQSHNTFPTPPPSLDTTASQKPEATPARRIDLDQLQKEADDLARTAQTIPSDVASIRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0265338_100115407	3300028800	Rhizosphere	MKKSVLLSFLVLFALLVTTAIPQTRNNYPKPPESMDPQNTGQAPATTSRSVDLMQLQRDADDLARKAQSIPSDVASVRKGMLPKDIIEKLKQIEKLSKRLRTELNP
Ga0265338_108757771	3300028800	Rhizosphere	VKKSVLLSLPVLLALSITLAIPQTTGHHFPTPPEALDPKPIDKSADTPSRRLDLIQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLK
Ga0308309_109121572	3300028906	Soil	VKKSLLLALPLISALLAAPAIPQGTKNNYPTPPPPLNSTTGEKEPATFGRVDLAKLQREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0311368_107253682	3300029882	Palsa	VKKSAWLALPAVLVLLVALAAPQSHNTFPTPPPSLDTTASQKPEATPVRRIDLEQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLK
Ga0302304_102106962	3300029993	Palsa	LALPAVLVLLVALAAPQSHNTFPTPPPSLDTTASQKPEATPVRRIDLEQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0302306_101035961	3300030043	Palsa	VKKSAWLALPAVLVLLVALAAPQSHNTFPTPPPSLDTTASQKPEATPVRRIDLEQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0265750_10226912	3300030813	Soil	VKKSAWLALPAVLVFLVALAAPQSHNTFPTPPPSLDTTASQKPEATPARRIDLDQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0073994_124173141	3300030991	Soil	VKKSAWLSLAWMLALLVAPAAPQTRNNFPKPPEALDPRATEKVPASSSKHIDLAKLQREADDLARTAQTIPSDIASVRRGMLPKDAIEKLKQIEKLSKHLRGELNP
Ga0265760_102515332	3300031090	Soil	VKKSAWLSLPAMLGLWVTLAVPQTTGRHFPTPPESLDPQAPDKSSDTLSRRLDLVQLQRDADDLARTAQTIPTDVASIRKGMLPKDVIDKLRQIEKLSKRLRTELNP
Ga0170824_1248948022	3300031231	Forest Soil	LLVTPAIPQTRNNFPKPPESMDPQATGQEPATSSRHVDLMQLQRDADDLARTAQSIPSDVASVRKGMLPKDIIEKLKQIEKLSKRLRTELNP
Ga0302325_100526362	3300031234	Palsa	MFQRFGSSGGRRTVKKSAWLSIPSVLGLFVVLAVPQSTRHFPTPPESMDPAPPDKDSTTFSRHVDIEQLQREADALARTAQTIPSDVASVRKGMLPKDTIEKLKQIEKLSKHLRAELNP
Ga0265316_100733722	3300031344	Rhizosphere	VKKSVLLSLPVLLALSITLAIPQTTGHHFPTPPEALDPKPIDKSADTPSRRLDLIQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRMELNP
Ga0265316_110086332	3300031344	Rhizosphere	VALAVPQVRTQFPTPPEPLDPQHPVQEAPSISRHVDLTQLQKEADELARTAETIPSDITSIRKGMLPKDMIQKLKQIEKMSKHLRTELTP
Ga0310686_1000842694	3300031708	Soil	VKKSAWLALPAVLVLLVALAAPQSHNTFPTPPPSLDTTASQKPEATPTRRIDLEQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0310686_1042343741	3300031708	Soil	VKKSACLSLSLLLGLLATTATPQSAGHHFPTPPEPLDSSTTAKEPATSSRHVDLAQLQKEADQLASTAQTIPSDVASIRKGILPKDLIEKLKQVEKLSRRLRTELNP
Ga0348332_140555661	3300032515	Plant Litter	GRRCIVKKSACLSLSLLLGLLATTATQQSAGHHFPTPPEPLDSSTTAKEPATSSRHVDLAQLQKEADQLASTAQTIPSDVASIRKGILPKDVIEKLKQIEKLSRRLRTELNP
Ga0335083_100110106	3300032954	Soil	MPENFCFRQEGPVKNSAWLSLPAMLGLWVTLAVPQTTQHHFPTPPESLDPQAPDKSQDTPSRRLDLVQLQRDAEDLARTAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELNP
Ga0334792_028201_771_1061	3300033888	Soil	LLALSVTLAIPQTTGHHFPTPPEALDPKPIDKSADTPSRRLDLIQLQRDADDLARTAQTIPTDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0334792_109135_397_750	3300033888	Soil	CWELFSQQEAYVKKSFLRLLPIVLGASVTLGVSQSRSNFPKPPESLDSTSSEKAPSTPSRRVDLVQLQKEADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069079

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences